Articles | Volume 18, issue 13
https://doi.org/10.5194/acp-18-9425-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/acp-18-9425-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
05 Jul 2018
Research article |
| 05 Jul 2018
| 05 Jul 2018
Disentangling the rates of carbonyl sulfide (COS) production and consumption and their dependency on soil properties across biomes and land use types
Aurore Kaisermann
CORRESPONDING AUTHOR
INRA/Bordeaux Science Agro, UMR 1391 ISPA, Villenave d'Ornon, 33140,
France
Jérôme Ogée
INRA/Bordeaux Science Agro, UMR 1391 ISPA, Villenave d'Ornon, 33140,
France
Joana Sauze
INRA/Bordeaux Science Agro, UMR 1391 ISPA, Villenave d'Ornon, 33140,
France
Steven Wohl
INRA/Bordeaux Science Agro, UMR 1391 ISPA, Villenave d'Ornon, 33140,
France
Sam P. Jones
INRA/Bordeaux Science Agro, UMR 1391 ISPA, Villenave d'Ornon, 33140,
France
Ana Gutierrez
INRA/Bordeaux Science Agro, UMR 1391 ISPA, Villenave d'Ornon, 33140,
France
Lisa Wingate
INRA/Bordeaux Science Agro, UMR 1391 ISPA, Villenave d'Ornon, 33140,
France
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Elsa Abs, Christoph Keuschnig, Pierre Amato, Chris Bowler, Eric Capo, Alexander Chase, Luciana Chavez Rodriguez, Abraham Dabengwa, Thomas Dussarrat, Thomas Guzman, Linnea Honeker, Jenni Hultman, Kirsten Küsel, Zhen Li, Anna Mankowski, William Riley, Scott Saleska, and Lisa Wingate
EGUsphere, https://doi.org/10.5194/egusphere-2025-1716, https://doi.org/10.5194/egusphere-2025-1716, 2025
This preprint is open for discussion and under review for Biogeosciences (BG).
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Meta-omics technologies offer new tools to understand how microbial and plant functional diversity shape biogeochemical cycles across ecosystems. This perspective explores how integrating omics data with ecological and modeling approaches can improve our understanding of greenhouse gas fluxes and nutrient dynamics, from soils to clouds, and from the past to the future. We highlight challenges and opportunities for scaling omics insights from local processes to Earth system models.
Robbert Petrus Johannes Moonen, Getachew Agmuas Adnew, Jordi Vilà-Guerau de Arellano, Oscar Karel Hartogensis, David Joan Bonell Fontas, Shujiro Komiya, Sam P. Jones, and Thomas Röckmann
EGUsphere, https://doi.org/10.5194/egusphere-2025-452, https://doi.org/10.5194/egusphere-2025-452, 2025
This preprint is open for discussion and under review for Atmospheric Chemistry and Physics (ACP).
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Understory ejections are distinct turbulent features emerging in prime tall forest ecosystems. We share a method to isolate understory ejections based on H2O-CO2 anomalie quadrants. From these, we calculate the flux contributions of understory ejections and all flux quadrants. In addition we show that a distinctly depleted isotopic composition can be found in the ejected water vapour. Finally, we explored the role of clouds as a potential trigger for understory ejections.
Sophie L. Baartman, Steven M. Driever, Maarten Wassenaar, Linda M. J. Kooijmans, Nerea Ubierna Lopez, Leon Mossink, Maria E. Popa, Ara Cho, Lisa Wingate, Thomas Röckmann, Steven M. A. C. van Heuven, and Maarten C. Krol
EGUsphere, https://doi.org/10.5194/egusphere-2025-215, https://doi.org/10.5194/egusphere-2025-215, 2025
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Carbonyl sulfide (COS) and carbon dioxide (CO2) uptake fluxes and isotope discrimination was measured in sunflower and papyrus plants, using a plant chamber approach and varying light availability. COS and CO2 isotope discrimination in plants have never been jointly measured before. COS isotope discrimination did not differ between the species, nor with changing light. CO2 fluxes and isotope values provided additional useful information for data interpretation.
Guohua Liu, Mirco Migliavacca, Christian Reimers, Basil Kraft, Markus Reichstein, Andrew D. Richardson, Lisa Wingate, Nicolas Delpierre, Hui Yang, and Alexander J. Winkler
Geosci. Model Dev., 17, 6683–6701, https://doi.org/10.5194/gmd-17-6683-2024, https://doi.org/10.5194/gmd-17-6683-2024, 2024
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Our study employs long short-term memory (LSTM) networks to model canopy greenness and phenology, integrating meteorological memory effects. The LSTM model outperforms traditional methods, enhancing accuracy in predicting greenness dynamics and phenological transitions across plant functional types. Highlighting the importance of multi-variate meteorological memory effects, our research pioneers unlock the secrets of vegetation phenology responses to climate change with deep learning techniques.
Luiz A. T. Machado, Jürgen Kesselmeier, Santiago Botía, Hella van Asperen, Meinrat O. Andreae, Alessandro C. de Araújo, Paulo Artaxo, Achim Edtbauer, Rosaria R. Ferreira, Marco A. Franco, Hartwig Harder, Sam P. Jones, Cléo Q. Dias-Júnior, Guido G. Haytzmann, Carlos A. Quesada, Shujiro Komiya, Jost Lavric, Jos Lelieveld, Ingeborg Levin, Anke Nölscher, Eva Pfannerstill, Mira L. Pöhlker, Ulrich Pöschl, Akima Ringsdorf, Luciana Rizzo, Ana M. Yáñez-Serrano, Susan Trumbore, Wanda I. D. Valenti, Jordi Vila-Guerau de Arellano, David Walter, Jonathan Williams, Stefan Wolff, and Christopher Pöhlker
Atmos. Chem. Phys., 24, 8893–8910, https://doi.org/10.5194/acp-24-8893-2024, https://doi.org/10.5194/acp-24-8893-2024, 2024
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Composite analysis of gas concentration before and after rainfall, during the day and night, gives insight into the complex relationship between trace gas variability and precipitation. The analysis helps us to understand the sources and sinks of trace gases within a forest ecosystem. It elucidates processes that are not discernible under undisturbed conditions and contributes to a deeper understanding of the trace gas life cycle and its intricate interactions with cloud dynamics in the Amazon.
Clémence Paul, Clément Piel, Joana Sauze, Olivier Jossoud, Arnaud Dapoigny, Daniele Romanini, Frédérique Prié, Sébastien Devidal, Roxanne Jacob, Alexandru Milcu, and Amaëlle Landais
EGUsphere, https://doi.org/10.5194/egusphere-2024-1755, https://doi.org/10.5194/egusphere-2024-1755, 2024
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Our study investigated the influence of plant processes on oxygen dynamics, crucial for paleoclimatology. By examining maize respiration and photosynthesis using advanced techniques, we enhanced our understanding of past climates through ice core analysis.
Clémence Paul, Clément Piel, Joana Sauze, Nicolas Pasquier, Frédéric Prié, Sébastien Devidal, Roxanne Jacob, Arnaud Dapoigny, Olivier Jossoud, Alexandru Milcu, and Amaëlle Landais
Biogeosciences, 20, 1047–1062, https://doi.org/10.5194/bg-20-1047-2023, https://doi.org/10.5194/bg-20-1047-2023, 2023
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To improve the interpretation of the δ18Oatm and Δ17O of O2 in air bubbles in ice cores, we need to better quantify the oxygen fractionation coefficients associated with biological processes. We performed a simplified analogue of the terrestrial biosphere in a closed chamber. We found a respiration fractionation in agreement with the previous estimates at the microorganism scale, and a terrestrial photosynthetic fractionation was found. This has an impact on the estimation of the Dole effect.
Javier de la Casa, Adrià Barbeta, Asun Rodríguez-Uña, Lisa Wingate, Jérôme Ogée, and Teresa E. Gimeno
Hydrol. Earth Syst. Sci., 26, 4125–4146, https://doi.org/10.5194/hess-26-4125-2022, https://doi.org/10.5194/hess-26-4125-2022, 2022
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Recently, studies have been reporting mismatches in the water isotopic composition of plants and soils. In this work, we reviewed worldwide isotopic composition data of field and laboratory studies to see if the mismatch is generalised, and we found it to be true. This contradicts theoretical expectations and may underlie an non-described phenomenon that should be forward investigated and implemented in ecohydrological models to avoid erroneous estimations of water sources used by vegetation.
Linda M. J. Kooijmans, Ara Cho, Jin Ma, Aleya Kaushik, Katherine D. Haynes, Ian Baker, Ingrid T. Luijkx, Mathijs Groenink, Wouter Peters, John B. Miller, Joseph A. Berry, Jerome Ogée, Laura K. Meredith, Wu Sun, Kukka-Maaria Kohonen, Timo Vesala, Ivan Mammarella, Huilin Chen, Felix M. Spielmann, Georg Wohlfahrt, Max Berkelhammer, Mary E. Whelan, Kadmiel Maseyk, Ulli Seibt, Roisin Commane, Richard Wehr, and Maarten Krol
Biogeosciences, 18, 6547–6565, https://doi.org/10.5194/bg-18-6547-2021, https://doi.org/10.5194/bg-18-6547-2021, 2021
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The gas carbonyl sulfide (COS) can be used to estimate photosynthesis. To adopt this approach on regional and global scales, we need biosphere models that can simulate COS exchange. So far, such models have not been evaluated against observations. We evaluate the COS biosphere exchange of the SiB4 model against COS flux observations. We find that the model is capable of simulating key processes in COS biosphere exchange. Still, we give recommendations for further improvement of the model.
Rafael Poyatos, Víctor Granda, Víctor Flo, Mark A. Adams, Balázs Adorján, David Aguadé, Marcos P. M. Aidar, Scott Allen, M. Susana Alvarado-Barrientos, Kristina J. Anderson-Teixeira, Luiza Maria Aparecido, M. Altaf Arain, Ismael Aranda, Heidi Asbjornsen, Robert Baxter, Eric Beamesderfer, Z. Carter Berry, Daniel Berveiller, Bethany Blakely, Johnny Boggs, Gil Bohrer, Paul V. Bolstad, Damien Bonal, Rosvel Bracho, Patricia Brito, Jason Brodeur, Fernando Casanoves, Jérôme Chave, Hui Chen, Cesar Cisneros, Kenneth Clark, Edoardo Cremonese, Hongzhong Dang, Jorge S. David, Teresa S. David, Nicolas Delpierre, Ankur R. Desai, Frederic C. Do, Michal Dohnal, Jean-Christophe Domec, Sebinasi Dzikiti, Colin Edgar, Rebekka Eichstaedt, Tarek S. El-Madany, Jan Elbers, Cleiton B. Eller, Eugénie S. Euskirchen, Brent Ewers, Patrick Fonti, Alicia Forner, David I. Forrester, Helber C. Freitas, Marta Galvagno, Omar Garcia-Tejera, Chandra Prasad Ghimire, Teresa E. Gimeno, John Grace, André Granier, Anne Griebel, Yan Guangyu, Mark B. Gush, Paul J. Hanson, Niles J. Hasselquist, Ingo Heinrich, Virginia Hernandez-Santana, Valentine Herrmann, Teemu Hölttä, Friso Holwerda, James Irvine, Supat Isarangkool Na Ayutthaya, Paul G. Jarvis, Hubert Jochheim, Carlos A. Joly, Julia Kaplick, Hyun Seok Kim, Leif Klemedtsson, Heather Kropp, Fredrik Lagergren, Patrick Lane, Petra Lang, Andrei Lapenas, Víctor Lechuga, Minsu Lee, Christoph Leuschner, Jean-Marc Limousin, Juan Carlos Linares, Maj-Lena Linderson, Anders Lindroth, Pilar Llorens, Álvaro López-Bernal, Michael M. Loranty, Dietmar Lüttschwager, Cate Macinnis-Ng, Isabelle Maréchaux, Timothy A. Martin, Ashley Matheny, Nate McDowell, Sean McMahon, Patrick Meir, Ilona Mészáros, Mirco Migliavacca, Patrick Mitchell, Meelis Mölder, Leonardo Montagnani, Georgianne W. Moore, Ryogo Nakada, Furong Niu, Rachael H. Nolan, Richard Norby, Kimberly Novick, Walter Oberhuber, Nikolaus Obojes, A. Christopher Oishi, Rafael S. Oliveira, Ram Oren, Jean-Marc Ourcival, Teemu Paljakka, Oscar Perez-Priego, Pablo L. Peri, Richard L. Peters, Sebastian Pfautsch, William T. Pockman, Yakir Preisler, Katherine Rascher, George Robinson, Humberto Rocha, Alain Rocheteau, Alexander Röll, Bruno H. P. Rosado, Lucy Rowland, Alexey V. Rubtsov, Santiago Sabaté, Yann Salmon, Roberto L. Salomón, Elisenda Sánchez-Costa, Karina V. R. Schäfer, Bernhard Schuldt, Alexandr Shashkin, Clément Stahl, Marko Stojanović, Juan Carlos Suárez, Ge Sun, Justyna Szatniewska, Fyodor Tatarinov, Miroslav Tesař, Frank M. Thomas, Pantana Tor-ngern, Josef Urban, Fernando Valladares, Christiaan van der Tol, Ilja van Meerveld, Andrej Varlagin, Holm Voigt, Jeffrey Warren, Christiane Werner, Willy Werner, Gerhard Wieser, Lisa Wingate, Stan Wullschleger, Koong Yi, Roman Zweifel, Kathy Steppe, Maurizio Mencuccini, and Jordi Martínez-Vilalta
Earth Syst. Sci. Data, 13, 2607–2649, https://doi.org/10.5194/essd-13-2607-2021, https://doi.org/10.5194/essd-13-2607-2021, 2021
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Transpiration is a key component of global water balance, but it is poorly constrained from available observations. We present SAPFLUXNET, the first global database of tree-level transpiration from sap flow measurements, containing 202 datasets and covering a wide range of ecological conditions. SAPFLUXNET and its accompanying R software package
sapfluxnetrwill facilitate new data syntheses on the ecological factors driving water use and drought responses of trees and forests.
Sam P. Jones, Aurore Kaisermann, Jérôme Ogée, Steven Wohl, Alexander W. Cheesman, Lucas A. Cernusak, and Lisa Wingate
SOIL, 7, 145–159, https://doi.org/10.5194/soil-7-145-2021, https://doi.org/10.5194/soil-7-145-2021, 2021
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Understanding how the rate of oxygen isotope exchange between water and CO2 varies in soils is key for using the oxygen isotope composition of atmospheric CO2 as a tracer of biosphere CO2 fluxes at large scales. Across 44 diverse soils the rate of this exchange responded to pH, nitrate and microbial biomass, which are hypothesised to alter activity of the enzyme carbonic anhydrase in soils. Using these three soil traits, it is now possible to predict how this isotopic exchange varies spatially.
Regina T. Hirl, Hans Schnyder, Ulrike Ostler, Rudi Schäufele, Inga Schleip, Sylvia H. Vetter, Karl Auerswald, Juan C. Baca Cabrera, Lisa Wingate, Margaret M. Barbour, and Jérôme Ogée
Hydrol. Earth Syst. Sci., 23, 2581–2600, https://doi.org/10.5194/hess-23-2581-2019, https://doi.org/10.5194/hess-23-2581-2019, 2019
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We evaluated the system-scale understanding of the propagation of the oxygen isotope signal (δ18O) of rain through soil and xylem to leaf water in a temperate drought-prone grassland. Biweekly δ18O observations of the water pools made during seven growing seasons were accurately reproduced by the 18O-enabled process-based model MuSICA. While water uptake occurred from shallow soil depths throughout dry and wet periods, leaf water 18O enrichment responded to both soil and atmospheric moisture.
Adrià Barbeta, Sam P. Jones, Laura Clavé, Lisa Wingate, Teresa E. Gimeno, Bastien Fréjaville, Steve Wohl, and Jérôme Ogée
Hydrol. Earth Syst. Sci., 23, 2129–2146, https://doi.org/10.5194/hess-23-2129-2019, https://doi.org/10.5194/hess-23-2129-2019, 2019
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Plant water sources of a beech riparian forest were monitored using stable isotopes. Isotopic fractionation during root water uptake is usually neglected but may be more common than previously accepted. Xylem water was always more depleted in δ2H than all sources considered, suggesting isotopic discrimination during water uptake or within plant tissues. Thus, the identification and quantification of tree water sources was affected. Still, oxygen isotopes were a good tracer of plant source water.
Adrià Barbeta, Sam P. Jones, Laura Clavé, Lisa Wingate, Teresa E. Gimeno, Bastien Fréjaville, Steve Wohl, and Jérôme Ogée
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2018-402, https://doi.org/10.5194/hess-2018-402, 2018
Revised manuscript not accepted
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Plant-water sources of a beech riparian forest were monitored using stable isotopes. Isotopic fractionation during root water uptake is usually neglected but may be more common than previously accepted. Xylem water was always more depleted in δ2H than all sources considered, suggesting isotopic discrimination during water uptake or within plant tissues. Thus, the identification and quantification of tree water sources was affected. Still, oxygen isotopes were a good tracer of plant source water.
Mary E. Whelan, Sinikka T. Lennartz, Teresa E. Gimeno, Richard Wehr, Georg Wohlfahrt, Yuting Wang, Linda M. J. Kooijmans, Timothy W. Hilton, Sauveur Belviso, Philippe Peylin, Róisín Commane, Wu Sun, Huilin Chen, Le Kuai, Ivan Mammarella, Kadmiel Maseyk, Max Berkelhammer, King-Fai Li, Dan Yakir, Andrew Zumkehr, Yoko Katayama, Jérôme Ogée, Felix M. Spielmann, Florian Kitz, Bharat Rastogi, Jürgen Kesselmeier, Julia Marshall, Kukka-Maaria Erkkilä, Lisa Wingate, Laura K. Meredith, Wei He, Rüdiger Bunk, Thomas Launois, Timo Vesala, Johan A. Schmidt, Cédric G. Fichot, Ulli Seibt, Scott Saleska, Eric S. Saltzman, Stephen A. Montzka, Joseph A. Berry, and J. Elliott Campbell
Biogeosciences, 15, 3625–3657, https://doi.org/10.5194/bg-15-3625-2018, https://doi.org/10.5194/bg-15-3625-2018, 2018
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Measurements of the trace gas carbonyl sulfide (OCS) are helpful in quantifying photosynthesis at previously unknowable temporal and spatial scales. While CO2 is both consumed and produced within ecosystems, OCS is mostly produced in the oceans or from specific industries, and destroyed in plant leaves in proportion to CO2. This review summarizes the advancements we have made in the understanding of OCS exchange and applications to vital ecosystem water and carbon cycle questions.
Joana Sauze, Sam P. Jones, Lisa Wingate, Steven Wohl, and Jérôme Ogée
Biogeosciences, 15, 597–612, https://doi.org/10.5194/bg-15-597-2018, https://doi.org/10.5194/bg-15-597-2018, 2018
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Previous studies have shown that differences in soil carbonic anhydrase (CA) activity are found in different biomes and seasons, but our understanding of the drivers responsible for those patterns is still limited. We artificially increased the soil CA concentration to test how soil pH affected the relationship between soil CA activity and concentration. We found that soil pH was the primary driver of soil CA activity.
Sam P. Jones, Jérôme Ogée, Joana Sauze, Steven Wohl, Noelia Saavedra, Noelia Fernández-Prado, Juliette Maire, Thomas Launois, Alexandre Bosc, and Lisa Wingate
Hydrol. Earth Syst. Sci., 21, 6363–6377, https://doi.org/10.5194/hess-21-6363-2017, https://doi.org/10.5194/hess-21-6363-2017, 2017
Yiying Chen, James Ryder, Vladislav Bastrikov, Matthew J. McGrath, Kim Naudts, Juliane Otto, Catherine Ottlé, Philippe Peylin, Jan Polcher, Aude Valade, Andrew Black, Jan A. Elbers, Eddy Moors, Thomas Foken, Eva van Gorsel, Vanessa Haverd, Bernard Heinesch, Frank Tiedemann, Alexander Knohl, Samuli Launiainen, Denis Loustau, Jérôme Ogée, Timo Vessala, and Sebastiaan Luyssaert
Geosci. Model Dev., 9, 2951–2972, https://doi.org/10.5194/gmd-9-2951-2016, https://doi.org/10.5194/gmd-9-2951-2016, 2016
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In this study, we compiled a set of within-canopy and above-canopy measurements of energy and water fluxes, and used these data to parametrize and validate the new multi-layer energy budget scheme for a range of forest types. An adequate parametrization approach has been presented for the global-scale land surface model (ORCHIDEE-CAN). Furthermore, model performance of the new multi-layer parametrization was compared against the existing single-layer scheme.
Jérôme Ogée, Joana Sauze, Jürgen Kesselmeier, Bernard Genty, Heidi Van Diest, Thomas Launois, and Lisa Wingate
Biogeosciences, 13, 2221–2240, https://doi.org/10.5194/bg-13-2221-2016, https://doi.org/10.5194/bg-13-2221-2016, 2016
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Estimates of photosynthesis and respiration at large scales are needed to improve our predictions of the global CO2 cycle. Carbonyl sulfide (OCS) has been proposed as a new tracer of photosynthesis, as it was shown that the uptake of OCS from leaves is nearly proportional to photosynthesis. But soils also exchange OCS with the atmosphere. Here we propose a mechanistic model of this exchange and show, using this new model, how we are able to explain several observed features of soil OCS fluxes.
L. Wingate, J. Ogée, E. Cremonese, G. Filippa, T. Mizunuma, M. Migliavacca, C. Moisy, M. Wilkinson, C. Moureaux, G. Wohlfahrt, A. Hammerle, L. Hörtnagl, C. Gimeno, A. Porcar-Castell, M. Galvagno, T. Nakaji, J. Morison, O. Kolle, A. Knohl, W. Kutsch, P. Kolari, E. Nikinmaa, A. Ibrom, B. Gielen, W. Eugster, M. Balzarolo, D. Papale, K. Klumpp, B. Köstner, T. Grünwald, R. Joffre, J.-M. Ourcival, M. Hellstrom, A. Lindroth, C. George, B. Longdoz, B. Genty, J. Levula, B. Heinesch, M. Sprintsin, D. Yakir, T. Manise, D. Guyon, H. Ahrends, A. Plaza-Aguilar, J. H. Guan, and J. Grace
Biogeosciences, 12, 5995–6015, https://doi.org/10.5194/bg-12-5995-2015, https://doi.org/10.5194/bg-12-5995-2015, 2015
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The timing of plant development stages and their response to climate and management were investigated using a network of digital cameras installed across different European ecosystems. Using the relative red, green and blue content of images we showed that the green signal could be used to estimate the length of the growing season in broadleaf forests. We also developed a model that predicted the seasonal variations of camera RGB signals and how they relate to leaf pigment content and area well.
Related subject area
Subject: Biosphere Interactions | Research Activity: Laboratory Studies | Altitude Range: Troposphere | Science Focus: Chemistry (chemical composition and reactions)
Laboratory measurements of stomatal NO2 deposition to native California trees and the role of forests in the NOx cycle
A mechanism for biogenic production and emission of MEK from MVK decoupled from isoprene biosynthesis
H2O2 modulates the energetic metabolism of the cloud microbiome
The contribution of soil biogenic NO and HONO emissions from a managed hyperarid ecosystem to the regional NOx emissions during growing season
Carbonyl sulfide exchange in soils for better estimates of ecosystem carbon uptake
Urban stress-induced biogenic VOC emissions and SOA-forming potentials in Beijing
Plant surface reactions: an opportunistic ozone defence mechanism impacting atmospheric chemistry
Erin R. Delaria, Bryan K. Place, Amy X. Liu, and Ronald C. Cohen
Atmos. Chem. Phys., 20, 14023–14041, https://doi.org/10.5194/acp-20-14023-2020, https://doi.org/10.5194/acp-20-14023-2020, 2020
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Observations of NO2 deposition to vegetation have been widely reported, but the magnitude and mechanism remain uncertain. We use laboratory measurements to study NO2 deposition to leaves of 10 native California tree species. We report important differences in the uptake rates between species and find that this process is primarily diffusion-regulated. We suggest that processes within leaves at a cellular level represent a negligible limitation to NO2 deposition at the canopy level.
Luca Cappellin, Francesco Loreto, Franco Biasioli, Paolo Pastore, and Karena McKinney
Atmos. Chem. Phys., 19, 3125–3135, https://doi.org/10.5194/acp-19-3125-2019, https://doi.org/10.5194/acp-19-3125-2019, 2019
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MEK is an important VOC in atmospheric chemistry and recently it has been shown that biogenic sources are globally as important as anthropogenic ones. We unveiled the mechanism by which within-plant transformation of MVK is a source of biogenic MEK. Such transformation is observed in red oak for both exogenous MVK, taken up from the atmosphere, and endogenous MVK generated within plant when it experiences stress (e.g. heat stress). The new mechanism is important for inclusion in models.
Nolwenn Wirgot, Virginie Vinatier, Laurent Deguillaume, Martine Sancelme, and Anne-Marie Delort
Atmos. Chem. Phys., 17, 14841–14851, https://doi.org/10.5194/acp-17-14841-2017, https://doi.org/10.5194/acp-17-14841-2017, 2017
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This article highlights the interactions between H2O2 and microorganisms within the cloud system. Experiments performed in microcosms with bacterial strains isolated from clouds showed that H2O2 strongly impacted the microbial energetic state. The ATP depletion measured in the presence of H2O2 was not due to the loss of cell viability. The strong correlation between ATP and H2O2 based on the analysis of 37 real cloud samples confirmed that H2O2 modulates the metabolism of cloud microorganisms.
Buhalqem Mamtimin, Franz X. Meixner, Thomas Behrendt, Moawad Badawy, and Thomas Wagner
Atmos. Chem. Phys., 16, 10175–10194, https://doi.org/10.5194/acp-16-10175-2016, https://doi.org/10.5194/acp-16-10175-2016, 2016
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In this study, we focused on the contributions of soil biogenic NO and HONO emissions from a managed hyperarid ecosystem to the regional NOx emissions during growing season. In particular, the second maximum in summer provides substantial evidence to hypothesize that those biogenic emissions from soils of managed drylands in the growing period may be much more important contributors to regional NOx budgets of dryland regions than previously thought.
Mary E. Whelan, Timothy W. Hilton, Joseph A. Berry, Max Berkelhammer, Ankur R. Desai, and J. Elliott Campbell
Atmos. Chem. Phys., 16, 3711–3726, https://doi.org/10.5194/acp-16-3711-2016, https://doi.org/10.5194/acp-16-3711-2016, 2016
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We constructed a model of carbonyl sulfide soil exchange sufficient for predicting outcomes in terrestrial ecosystems. Empirical observations combined with soil gas exchange theory reveal simultaneous abiotic production and biotic uptake mechanisms. Measurement of atmospheric carbonyl sulfide is an emerging tool to quantify photosynthesis at important temporal and spatial scales.
Andrea Ghirardo, Junfei Xie, Xunhua Zheng, Yuesi Wang, Rüdiger Grote, Katja Block, Jürgen Wildt, Thomas Mentel, Astrid Kiendler-Scharr, Mattias Hallquist, Klaus Butterbach-Bahl, and Jörg-Peter Schnitzler
Atmos. Chem. Phys., 16, 2901–2920, https://doi.org/10.5194/acp-16-2901-2016, https://doi.org/10.5194/acp-16-2901-2016, 2016
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Trees can impact urban air quality. Large emissions of plant volatiles are emitted in Beijing as a stress response to the urban polluted environment, but their impacts on secondary particulate matter remain relatively low compared to those originated from anthropogenic activities. The present study highlights the importance of including stress-induced compounds when studying plant volatile emissions.
W. Jud, L. Fischer, E. Canaval, G. Wohlfahrt, A. Tissier, and A. Hansel
Atmos. Chem. Phys., 16, 277–292, https://doi.org/10.5194/acp-16-277-2016, https://doi.org/10.5194/acp-16-277-2016, 2016
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“Breathing” ozone can have harmful effects on sensitive vegetation when sufficient ozone enters the plant leaves through the stomatal pores. Here we show that cis-abienol, a semi-volatile organic compound secreted by the leaf hairs (trichomes) of various tobacco varieties, protects the leaves from breathing ozone. Ozone is efficiently removed by chemical reactions with cis-abienol at the plant surface, forming oxygenated VOC (formaldehyde and methyl vinyl ketone) that are released into the air.
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Short summary
Soils simultaneously produce and consume the trace gas carbonyl sulfide (COS). To understand the role of these processes, we developed a method to estimate their contribution to the soil–atmosphere COS exchange. Exchange was principally driven by consumption, but the influence of production increased at higher temperatures, lower soil moisture contents and lower COS concentrations. Across the soils studied, we found a strong interaction between soil nitrogen and COS exchange.
Soils simultaneously produce and consume the trace gas carbonyl sulfide (COS). To understand the...
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