the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.

Competing multiple oxidation pathways shape atmospheric limonene-derived organonitrates simulated with updated explicit chemical mechanisms
Qinghao Guo
Haofei Zhang
Bo Long
Lehui Cui
Yiyang Sun
Hao Liu
Yaxin Liu
Yunting Xiao
Pingqing Fu
Organonitrates (ONs) are key components of secondary organic aerosols (SOAs) with potential environmental and climate effects. However, ON formation from limonene, a major monoterpene with unique structure, and its sensitivity to oxidation pathways remain insufficiently explored due to the absence of models with explicit chemical mechanisms. This study advances the representation of limonene-derived ON formation by incorporating 90 gas-phase reactions and 39 intermediates across three oxidation pathways (O3, OH, NO3) into both a chemical box model and a global model. Box model sensitivity experiments revealed that competition among major oxidation pathways, coupled with the high yield of limonene-derived ON from O3-initiated oxidation, leads to increased limonene-derived ON production when the O3-initiated pathway is enhanced, whereas strengthening the OH- or NO3-initiated pathways reduces ON formation. Compared to the box model, the global simulation exhibits stronger nonlinear responses and great spatiotemporal variability in limonene-derived ON formation across different oxidation pathways. This is primarily driven by the complex distribution of precursors and oxidants, as well as the change in dominate chemical pathways under various meteorological conditions. In the presence of the other two pathways, increasing the O3- or NO3-initiated oxidation pathway reduces the global limonene-derived ON burden by 19.9 % and 17.3 %, respectively, whereas enhancing the OH-initiated pathway increases it by 44.7 %. Limonene-derived ON chemistry developed in this study not only enhances the global model's ability to simulate ON formation evaluated through comparison with observations but also demonstrates an approach based on explicit chemical mechanisms that establishes a methodological framework for simulating the chemical formation processes of SOA.
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Secondary organic aerosols (SOAs) represent a substantial fraction of fine particulate matter and contribute to global public health risk, deterioration of air quality and climate change (GBD 2021 Risk Factors Collaborators, 2024; Lelieveld et al., 2015; Tao et al., 2017). Among chemical constituents, organonitrates (ONs) are of particular interest, owing to their large fraction in SOA (5 %–77 %) (Farmer et al., 2010; Kiendler-Scharr et al., 2016). The rate of particulate ON formation contributes strongly to the rate of SOA formation at night, which emphasizes the important roles of particulate ON in ambient SOA (Guo et al., 2024). The nitrate group in ON influences the physical and chemical properties of SOA, such as decreasing saturated vapor pressure of the product molecule (Capouet and Müller, 2006). ONs are secondary compounds formed via the oxidation of volatile organic compounds (VOCs) in the presence of nitrogen oxides (), substantially influencing NOx cycling and formation of ozone (O3) and HONO (Perring et al., 2013). On a global scale, VOCs are mainly emitted from biogenic sources, while NOx are emitted from a wide variety of anthropogenic sources (Ng et al., 2017; Glasius and Goldstein, 2016). Therefore, a thorough investigation of ON is warranted to advance our understanding of interaction between biogenic and anthropogenic emissions.
The chemical formation mechanisms of ON are complex, hampering efforts to simulate and control SOA. In the daytime, hydroxyl radicals (OH) and ozone (O3) oxidation of VOCs can produce the peroxy radical (RO2), which reacts with NOx to produce ON (Perring et al., 2013), while the reaction between nitrate radicals (NO3) and VOCs dominates the generation of ON in the nighttime (Rollins et al., 2009; Perring et al., 2013; Ng et al., 2017). Furthermore, the coexistence among OH, O3 and NO3 has been investigated in the nocturnal oxidation of VOCs (Brown and Stutz, 2012; Barber et al., 2018; Kwan et al., 2012; Chen et al., 2022). Compared with a single oxidant, the introduction of multiple oxidants leads to the possible complex reaction mechanisms for VOCs. The regeneration of OH would change the O3 oxidation process to form SOA (Sato et al., 2013). Chamber experiments show that SOA from NO3 oxidation of VOCs is affected by oxidation of NO2 by O3 (Ng et al., 2017). Therefore, VOCs are oxidized through the synergistic effects of multiple oxidants, driving the chemical formation of ON. However, ON formation from the VOCs oxidation governed by mixing oxidants has not been fully understood. In particular, the impact of oxidation pathways on the ON formation and spatial distribution is still unclear.
As one of the typical biogenic volatile organic compounds (BVOCs) (10 % of monoterpenes), limonene is mostly emitted from citrus plants and coniferous trees, with a total emission rate of (Guenther et al., 2012; Sindelarova et al., 2014). Limonene has a unique structure with an endocyclic double bond and an exocyclic double bond, which makes it reactive towards atmospheric oxidants (Surratt et al., 2008). Higher ON (30 %–72 %) and SOA yields (17 %–40 %) through NO3-initiated oxidation of limonene than other monoterpenes have been observed in laboratory experiments (Fry et al., 2014, 2011; Hallquist et al., 1999; Spittler et al., 2006; Moldanova and Ljungström, 2000). It has been well demonstrated that limonene + NO3 is the most important pathway to form limonene-derived ON (Kilgour et al., 2024; Ehn et al., 2014; Jokinen et al., 2015; Zhao et al., 2015). Furthermore, a recent study found the primary nitrooxy RO2 formed through NO3 addition to limonene occurs both at the endocyclic double bond and the exocyclic double bond. These products could undergo autoxidation, which is fast enough to compete with RO2 bimolecular reactions (Mayorga et al., 2022). The molecular compositions and formation mechanism of limonene-derived ON have been well investigated through observations and laboratory studies, while their description in models remains not explicit and advanced.
The early atmospheric model utilizes empirical yields and empirical coefficients for predicting the limonene-derived SOA production in simulation (Yu et al., 2019). Currently, chemical mechanisms are simplified according to analogies with structurally similar compounds in most regional and global models due to simplicity and efficiency in calculation (Fisher et al., 2016; Wu et al., 2020; Li et al., 2023). Nevertheless, previous model studies have not included the formation mechanisms of limonene-derived ON in detail (Pye et al., 2015; Li et al., 2023; Zare et al., 2019). Thus, incorporating explicit mechanisms is helpful to understand the limonene-derived ON formation process and the influence of interaction between multiple oxidation pathways on ON formation.
Herein, we investigated the impacts of multiple oxidation pathways on limonene-derived ON using both a chemical box model and a global model, which were developed to include explicit chemical mechanisms for limonene-derived ON formation. The effects of competition among individual oxidation pathways on limonene-derived ON formation were discussed using a chemical box model based on proposed mechanisms. The simulation framework of explicit chemical mechanisms was integrated into a global model to evaluate the spatial distributions of limonene-derived ON and contributions of individual oxidation pathways. This study presents a numerical simulation framework for atmospheric chemical processes and aims to enhance the ability of models to simulate ON and understand the competition effects among atmospheric oxidation pathways of SOA formation, improving atmospheric composition forecasts and informing interaction between biogenic and anthropogenic emissions.
2.1 Limonene-derived ON formation mechanism
In order to simulate ON via the gas-phase oxidation of limonene, the chemical mechanism used in our model was updated with gas-phase chemical mechanisms of limonene-derived ON based on recent laboratory studies (Mayorga et al., 2022) and the Master Chemical Mechanism (MCM, v3.3.1). The explicit chemical mechanism of limonene-derived ON involves three initial oxidation pathways: OH-, O3- and NO3-initiated oxidation (Fig. 1). The detailed formulas of species can be found in Table S1 in the Supplement. The updated explicit formation mechanisms are listed in Fig. S1 and Table S2 in the Supplement. Compared to the MCM, the chemical mechanism of limonene-derived ON formation used in this study is developed to include the following:
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NO3 addition at three different carbon sites. Based on previous laboratory studies, the exocyclic double-bond oxidation branching ratio is ∼0.03 (Fry et al., 2011; Donahue et al., 2007), while the branching ratios of the two endocyclic C10H16NO5–RO2 isomers are 0.65:0.35 (Mayorga et al., 2022). Thus, these branching ratios of the three C10H16NO5–RO2 isomers were used in our work.
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Sequential NO3 oxidation reactions to form ON for all the products that contain double bonds from OH- and O3-initiated oxidation in the MCM. The rate constants were set to be the same as those used in MCM for limononaldehyde.
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The formation of a ring-opened nitrooxy RO2 in the presence of O2 due to bond scission of the two endocyclic nitrooxy RO and its branching ratio was estimated (Draper et al., 2019; Kurten et al., 2017; Guo et al., 2022).
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H shifts of the exocyclic C10H16NO4–RO.
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Bimolecular and unimolecular reactions of the C10H16NO6–RO2 and C10H16NO7–RO2. The rate constants for the bimolecular reactions are the same as those used in the MCM, and autoxidation rate constants are calculated by quantum chemical calculations (Mayorga et al., 2022).
In addition, photolysis, widely recognized as the predominant removal pathway of limonene-derived ON (Picquet-Varrault et al., 2020; Wang et al., 2023), is included in our mechanism. While heterogeneous processes and hydrolysis of limonene-derived ON are not included in our model, potentially resulting in a slight overestimation of simulated limonene-derived ON concentrations, their contributions to ON removal are expected to be substantially smaller than that of photolysis. Consequently, this omission introduces only minor uncertainties in our results. In our explicit chemical mechanism, more intermediates and chemical processes of limonene-derived ON were distinguished than simplified mechanisms used in previous models.
We assumed highly oxidized ON products (C10H13NO7, C10H15NO4, C10H15NO5, C10H15NO6, C10H15NO7, C10H15NO8, C10H17NO5, C10H17NO6, C10H17NO7) that have levels of semi-volatility to low volatility and can condense into the particulate phase upon formation. Their vapor pressures are estimated to calculate gas–particle partitioning (Table S3).
The vapor pressures of the above-mentioned ON species were estimated using two group contribution methods: EVAPORATION (Compernolle et al., 2011) and SIMPOL (Pankow and Asher, 2008). They are both widely used structure–activity relationship (SAR)-based group contribution models to predict molecular vapor pressures. The key difference is that EVAPORATION considers proximity-based functional group interactions, so it considers differences in the locations of functional groups, while predictions from SIMPOL do not vary based on functional group locations. As a result, isomeric compounds with the same functional groups but different structures may have different predicted vapor pressures using EVAPORATION but the same using SIMPOL. Therefore, the EVAPORATION model is preferred when chemicals structures are known, while the SIMPOL model could be biased. In a recent study, we showed that the EVAPORATION-based kinetic model predicts isoprene SOA more accurately than the SIMPOL-based model, which underpredicts by ∼20 % (Shen et al., 2024).
In this work, because the chemical structures of the major ON species are known based on our recent work (Mayorga et al., 2022), we adopted the EVAPORATION method in all our simulations. As the EVAPORATION model input, the structures of the ON species from Mayorga et al. (2022) were converted to SMILES strings. To illustrate the difference between the two models, the EVAPORATION-predicted vapor pressures were compared with SIMPOL predictions (Table S3). The two methods predict vapor pressures within 1 order of magnitude in most cases, which is typically considered an acceptable uncertainty for group contribution vapor pressure estimations.
2.2 Chemical box model
A zero-dimensional (0-D) chemical box model was used to examine the chemical processes of limonene-derived ON, investigating the contributions of atmospheric oxidants and oxidant pathways. The chemical mechanism presented in Fig. S1 and Table S2 was applied in this box model. To calculate the total production of limonene-derived ON, processes such as photolysis, dilution and deposition were ignored for all chemical species in the model. The temperature was set to 298 K in the model. The initial concentrations of limonene and other atmospheric components for all cases were set as shown in Table S5. Limonene at a concentration of was used as the precursor for ON, which falls within the range of values reported in laboratory and observation studies (Guo et al., 2022; Luo et al., 2023; Ham et al., 2016). The initial concentration of OH, O3 and NO3 spanned 1.0×105–1.0×1019, 1.0×1011–1.0×1018 and 1.0×109–1.0×1017 , respectively. The low values represent typical atmospheric concentrations of these species, which are within the range of those reported in previous studies (Shen et al., 2021; Liu et al., 2023; Matsunaga and Ziemann, 2019). The medium to high values represent extreme conditions, in order to investigate the significant impact of oxidants on limonene-derived ON across a broad spectrum of oxidant levels. Chamber experiments were simulated by the box model under an ideal situation, which has been specifically design to analyze chemical processes, while simulations under real atmospheric conditions were carried out using a global model in Sect. 2.3. We conducted sensitivity tests (Sect. S1 in the Supplement) to examine oxidation pathways for the formation of limonene-derived ON. Sensitivity tests under a single initial oxidation pathway were set. Building upon this foundation, sensitivity tests with multiple oxidation pathways were implemented: (1) introducing secondary oxidant across three concentration gradients under fixed primary oxidant levels, followed by (2) increasing concentration of a third oxidant with three concentration gradients. A summary of all cases can be found in Table S4.
2.3 Simulation of global limonene-derived ON
We used the Community Earth System Model (CESM) version 1.2.2.1 coupled with the University of Michigan Integrated Massively Parallel Atmospheric Chemical Transport (IMPACT) aerosol model with a resolution of 1.9°×2.5° for this study. The CESM–IMPACT model has included a fully explicit gas-phase photochemical mechanism to predict the formation of semi-volatile organic compounds (SVOCs), which then partition to an aerosol phase (Lin et al., 2014), facilitating the incorporation of an explicit limonene-derived ON mechanism to simulate their global burden. The IMPACT aerosol module gets the meteorology field from the CESM at each time step, while changes in the aerosols in IMPACT do not provide feedback to the CESM. The emissions of BVOC precursors are estimated by the Model of Emissions of Gases and Aerosols from Nature (MEGAN) inventory coupled to the CESM–IMPACT model. The developed explicit gas-phase chemical mechanism, the same as used in the above chemical box model, was applied to simulate the formation of limonene-derived ON. The highly oxidized limonene-derived ON, considered a semi-volatile species partitioning from the gas phase to the particle phase, contributes to SOA. A base case (Case 0) was designed to simulate limonene-derived ON under all three initial oxidation pathways, and six sensitivity experiments were designed for simulating global burden limonene-derived ON under two initial oxidation pathways (Case 1–3) and a single initial oxidation pathway (Case 4–6), respectively. The above seven cases are summarized in Sect. S2 and Table S6.
3.1 Limonene-derived ON formation through individual initial oxidation pathway
We employed a chemical box model to simulate limonene-derived ON formed through three initial oxidation pathways, considering various oxidant concentrations (Fig. 2). These simulations were designed to evaluate the effect of increasing oxidant concentrations on the yield of limonene-derived ON from each initial oxidation pathway. In the case with an individual OH oxidation pathway, the concentration of limonene-derived ON increases as the initial OH concentration increases (Fig. 2a), following the pattern of limonene consumption (Fig. S2a). Initial OH concentration increases from 1.0×105 to , resulting in a ∼20.0-fold increase in the production of limonene-derived ON. At this stage, limonene is not completely consumed by OH, indicating that higher initial OH concentration will increase consumption of limonene to produce more ON.

Figure 2Variations of limonene-derived ON in an individual oxidation pathway under different oxidant concentrations. The triangles represent the concentration of limonene-derived ON in each experiment. The lines represent the trend of limonene-derived ON. The three data point colors represent three initial oxidation pathways (red for OH-initiated oxidation, yellow for O3-initiated oxidation, green for NO3-initiated oxidation).
In the case with an individual O3 oxidation pathway, the limonene-derived ON increases first and then maintains a relatively stable production with the increase in initial O3 concentration (Fig. 2b). Limonene is not completely consumed when initial O3 concentrations are below . Increased consumption of limonene leads to an increase in ON production with increased O3 concentration.
The same as the cases of the OH- and O3-initiated oxidation pathways, limonene-derived ON increases when initial NO3 concentrations below could be caused by incompletely consumed limonene (Fig. 2c). The increased consumption of limonene with an increase in concentrations of NO3 leads to the increased production of ON. However, different from the cases of OH- and O3-initiated oxidation pathways, as initial NO3 concentrations continued to increase, limonene-derived ON production decreases. When limonene-derived ON concentrations reached a steady state within 30 min, compared to the case with initial NO3 concentration of , reactions of LIMAL and NO3 became the dominant pathway in the case with an initial NO3 concentration of . The lower yield of the NO3 oxidation pathway (9.2 %) of LIMAL relative to the OH oxidation pathway (28.8 %) results in decreased limonene-derived ON (green box in Fig. S1). The results mean that at low initial oxidant concentration, limonene-derived ON shows a strong dependence on the initial oxidant concentration, and the dependence on intermediate reaction rates becomes more important at high initial oxidant concentration.
In addition, the average concentrations of ON of OH-, O3- and NO3-initiated oxidation pathways when oxidations are sufficient are calculated separately. The O3-initiated oxidation pathway ( limonene-derived ON produced) yields more ON than the OH- ( limonene-derived ON produced) and NO3-initiated ( limonene-derived ON produced) oxidation pathways when limonene initial concentration is constant. This indicates that under initial conditions with sufficient oxidation, the O3-initiated oxidation pathway of limonene has highest yield of ON, which is about 15.0 %, while the yield is low for the OH- (2.1 %) and NO3-initiated (0.7 %) oxidation pathway. This difference in the ON yield among various oxidation pathways will be used to explain the contributions of each oxidation pathway to ON concentration in the following discussion.
3.2 Effects of multiple oxidation pathways on limonene-derived ON formation
Compared to the simulation scheme with individual oxidation pathways discussed above, introducing multiple oxidation pathways leads to comprehensive competition among them, which results in a nonlinear response of ON concentration to changes in the initial concentrations of oxidants. Figure 3 shows the dependence of limonene-derived ON on the initial concentration of oxidants when two initial oxidation pathways are included. The addition of oxidants has various effects on the yield of limonene-derived ON. When the initial concentration of oxidant is low ( for OH, for O3, for NO3), the initial limonene will not be completely consumed. In all cases with a low concentration of oxidants, adding another oxidant with an oxidation pathway will increase the consumption of limonene, leading to an increase in the limonene-derived ON production. When the initial concentration of oxidants is high, limonene will be nearly or completely consumed. In these cases, the production of limonene-derived ON will be determined by the competition between the two oxidation pathways. The product of limonene-derived ON steadily increased as the initial concentration of O3 increased from 0 to when the initial concentration of OH or NO3 was constant (Fig. 3a and f). According to the chemical mechanism applied in the model, the reaction between limonene and O3 has higher rate than OH and NO3 in these cases (Table S7). As a result, in the presence of O3, the oxidation of limonene with O3 proceeds more rapidly than with OH or NO3, leading to higher concentration of limonene-derived ON due to the high yield of the O3 oxidation pathway, as discussed in the section above (compare Fig. 2b with Fig. 2a and c). In contrast, compared to only including the O3 oxidation pathway, adding oxidation pathways with OH or NO3 will result in a decrease in limonene-derived ON production (Fig. 3c and d) because some limonene that would have reacted with O3 is converted to ON instead through the OH or NO3 pathways with a lower yield. Therefore, the dominant oxidation pathway and its ON yield determine the impact of the competition between the two oxidation pathways on the final limonene-derived ON production. A similar phenomenon observed in laboratory study shows that NOx influences γ-terpinene ozonolysis by enhancing NO3 production at high NOx levels, which subsequently leads to NO3 preferentially consuming γ-terpinene over O3 (Xu et al., 2020), illustrating the competition between oxidants. The addition of the OH-initiated oxidation pathway results in a small increase in ON production compared to NO3-initiated oxidation alone (Fig. 3e), due to the slightly higher yields of limonene-derived ON for OH-initiated oxidation pathway. The ON production would not change much when the NO3-initiated oxidation pathway is added compared to the case with the OH-initiated oxidation pathway alone (Fig. 3b) because of the main initial oxidation pathway that is unchanged. These sensitivity experiments suggest that the competition of oxidation pathways plays an important role in the formation of limonene-derived ON.

Figure 3Simulated limonene-derived ON in two initial oxidation pathways under different oxidant conditions, including variation of production of limonene-derived ON with adding (a) initial O3 concentration and (b) initial NO3 concentration in the three OH levels; variation of limonene-derived ON production with adding (c) initial OH concentration and (d) initial NO3 concentration in the three O3 levels; and variation of limonene-derived ON production with adding (e) initial OH concentration and (f) initial O3 concentration in the three NO3 levels.
Based on the production variations of limonene-derived ON in the cases with one and two initial oxidation pathways discussed above, the comprehensive impact of multiple oxidants on limonene-derived ON formation in the cases with multiple initial oxidation pathways is analyzed (Fig. 4). The results can be summarized as belonging to three types:
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Type 1 includes the cases when limonene is not completely consumed (Fig. S4). When two initial oxidant concentrations are low (Fig. 4a, d, and g) and medium (Fig. 4d and g), the addition of a third oxidant increases the production of limonene-derived ON because the addition of the third oxidant increases the consumption of limonene. If the oxidant concentration is sufficient to consume up limonene, the production of limonene-derived ON will be determined by the competition between initial oxidation pathways.
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Type 2 includes the cases with large changes of limonene-derived ON. Under low NO3 and moderate and high O3 conditions, the production of limonene-derived ON decreases when OH is added (Fig. 4a and b) because some limonene that would have reacted with O3 is converted to ON instead through the OH pathways with lower yield. The formation of limonene-derived ON shows a similar pattern for Type 2 in Fig. 4h and i. On the one hand, the yield of limonene-derived ON from NO3-initiated oxidation is lowest, so the production of limonene-derived ON will decrease when the formation of limonene-derived ON from this pathway becomes the dominant formation route. On the other hand, adding the NO3-initiated oxidation pathway also consumes NO3 that would have reacted with the product of the OH- and O3-initiated oxidation, resulting in decreased production of limonene-derived ON. The changes in ON production with constant initial concentration of limonene and various oxidation pathways indicate the interactions of different oxidation processes of limonene. In contrast to OH- and NO3-initiated oxidation pathways, adding oxidation pathways with O3 will result in an increase in limonene-derived ON production (Fig. 4e), due to a higher yield of limonene-derived ON from the O3-initiated oxidation pathway than OH- and NO3-initiated oxidation pathways. Since the yield of limonene-derived ON of OH-initiated oxidation is higher than NO3-initiated oxidation, the production of limonene-derived ON decreases (Fig. 4c) as the main oxidation pathway changes from NO3 to OH oxidation (Table S8).
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Type 3 includes some sensitivity experiments (Fig. 4d–i) in which ON concentration does not change much with the addition of an oxidation pathway. This could be explained by minimal competition with the rapid main oxidation pathway.
These sensitivity experiments suggest that the limonene-derived ON production in the simulated system is not only controlled by limonene concentration but also affected by synergic effects of multiple oxidants and oxidation pathways.

Figure 4The influence of adding OH-, O3- and NO3-initiated oxidation pathways on the production of limonene-derived ON under different oxidant conditions, including variation of limonene-derived ON production with adding initial OH concentration in the three O3 levels under (a) low, (b) moderate and (c) high NO3 levels; variation of limonene-derived ON production with adding initial O3 concentration in the three OH levels under (d) low, (e) moderate and (f) high NO3 levels; variation of limonene-derived ON production with adding initial NO3 concentration in the three OH levels under (d) low, (e) moderate and (f) high O3 levels. In each panel, the types marked above the columns show the cases when limonene is not completely consumed (Type 1) and almost completely consumed (large (Type 2) and small (Type 3) changes in limonene-derived ON production).
3.3 Contribution of each oxidation pathway to global limonene-derived ON
A global simulation using the CESM–IMPACT model was performed to characterize the spatial and temporal distribution of limonene-derived ON and the contributions of each oxidation pathway to global burden. Incorporation of formation of limonene-derived ON reduces underestimation of simulated ON through comparison with observations summarized in the literature (Sect. S3) (Li et al., 2023). The spatial distribution of limonene-derived ON is shown in Fig. 5a. The simulated global mean limonene-derived ON burden is about 60.5 µg m−2, and the highest burdens () are predicted over tropical forest regions of central Africa. As the primary precursor of limonene-derived ON, the concentration of limonene dominates the yield of these ON compounds. The seasonal cycle of simulated limonene-derived ON is presented in Fig. S6, which is mainly dependent on limonene levels. The global average limonene-derived ON burden peaks in the summer (69.2 µg m−2) due to the highest global average limonene concentration (Fig. S7b), while the large burden of limonene-derived ON in fall is driven by the presence of both a high limonene concentration (Fig. S7c) and a high NO concentration (Fig. S8c) compared to spring and winter. In contrast, the burden of limonene-derived ON is lowest in winter (48.1 µg m−2) because of the lowest concentration of limonene (Fig. S7d). Beyond the effects of limonene and NO concentrations, oxidant levels and oxidation pathways also affect the formation mechanisms and production of limonene-derived ON, which may explain the highest burden in regions such as Central Africa, rather than the Amazon, where limonene concentrations are highest over the world (Fig. S9a). The concentration of oxidants is inherently low in the Amazon (Fig. S9b–d), and oxidant scavenging in the presence of isoprene with high concentrations greatly reduces the photochemical formation of limonene-derived ON (McFiggans et al., 2019). Thus, oxidant competition with isoprene leads to a low burden of limonene-derived ON in the Amazon despite the highest burden of limonene there. Therefore, high concentrations of limonene-derived ON can only form when both high limonene and high oxidant concentrations are present simultaneously.

Figure 5Annual mean column concentration of limonene-derived ON with different simulation schemes. (a) Run with three initial oxidation pathways (Case 0), (b) without the OH-initiated oxidation pathway (Case 1), (c) without the O3-initiated oxidation pathway (Case 2), (d) without the NO3-initiated oxidation pathway (Case 3), (e) without the O3- and NO3-initiated oxidation pathways (Case 4), (f) without the OH- and NO3-initiated oxidation pathways (Case 5), and (g) without the OH- and O3-initiated oxidation pathway (Case 6).
To quantify the contribution of each oxidation pathway to the formation of limonene-derived ON in different regions, we conducted a series of sensitivity experiments (Case 1–6 introduced in the Methodology section) on the oxidation pathways (Fig. 5b–g). Our simulations indicate that increasing O3- and NO3-initiated oxidation pathways result in a 15.5 % and 18.0 % increase in the global average burden of limonene-derived ON, respectively, compared to the OH-initiated oxidation pathway alone (Fig. S10a and b). This is primarily because higher yields of limonene-derived ON are associated with the O3- and NO3-initiated oxidation pathways rather than the OH-initiated oxidation pathways. When compared to the O3-initiated oxidation pathway alone (Fig. S10c and d), the addition of OH- or NO3-initiated pathways results in an increased burden of limonene-derived ON in the limonene-sufficient region (e.g., Amazon), owing to adding a limonene-derived ON formation pathway to consume more limonene. However, in the limonene-deficient yet NO3-sufficient regions (e.g., Central Africa, the Mediterranean, and middle and low latitudes of Asia), increasing the OH- or NO3-initiated oxidation pathways reduces the burden of limonene-derived ON. This occurs because the oxidation of limonene by OH or NO3 suppresses O3-initiated oxidation, which otherwise produces limonene-derived ON with a high yield. Additionally, if limonene undergoes oxidation by NO3, the availability of NO3 for the nitration of OH- and O3-initiated oxidation products of limonene will decrease, resulting in a reduction in limonene-derived ON. The addition of OH- and O3-initiated oxidation pathways reduces the global average burden of limonene-derived ON by 60.5 % and 78.1 %, respectively, compared to the case with the NO3-initiated oxidation pathway alone (Fig. S10e and f). This reduction is likely due to insufficient NO3 oxidation at night to further oxidize intermediates produced from OH- and O3-initiated limonene oxidation during the day, limiting the formation of limonene-derived ON at night.
The burden of limonene-derived ON undergoes a noticeable change when an additional oxidation pathway is introduced to the existing two pathways (Fig. S11). Adding the OH-initiated oxidation pathway increases the global average burden of limonene-derived ON from 41.8 to 60.5 µg m−2, by 44.7 %, while adding the O3-initiated oxidation pathway decreases it from 75.5 to 60.5 µg m−2, by 19.9 % (Fig. S11a and b), which was attributed to the competition between the OH and O3 oxidation pathways for reactions with limonene. Compared to the simplified conditions in simulations using the chemical box model, the global simulation considers diurnal variations of oxidation. When the O3-initiated oxidation pathway produces the same amount of limonene-derived ON as the OH-initiated pathway, it consumes more NO3. As a result, increasing the O3 oxidation pathway reduces the availability of NO3 for the nitration of intermediate oxidation products in the nighttime, thereby lowering the total limonene-derived ON yield across all three pathways. In contrast, enhancing the OH oxidation pathway increases the total yield. Moreover, the addition of the NO3-initiated oxidation pathway increases the burden of limonene-derived ON in the limonene-sufficient region even over 150 µg m−2 (Fig. S11c). However, in the region with high NO3 concentration, the burden of limonene-derived ON decreases (Fig. S11c) because the NO3-initiated oxidation pathway yields less limonene-derived ON than the O3- and OH-initiated oxidation pathways. These results highlight the different nonlinear responses of limonene-derived ON to multiple oxidation pathways under varying oxidation conditions and precursor concentrations. This discrepancy highlights differences between global-scale dynamics and idealized box model conditions, emphasizing the importance of developing explicit chemical mechanisms in global models for understanding SOA formation processes. A prior laboratory study has also demonstrated that investigating the response of ON reveals complex and nonlinear behavior with implications that could inform expectations of changes to ON concentrations as efforts are made to reduce oxidant concentrations (Mayhew et al., 2023).
In this work, the explicit chemical mechanism is developed to simulate formation and spatial distribution of limonene-derived ON using a chemical box model and the global model CESM–IMPACT. Under multiple initial oxidation pathways, limonene-derived ON shows nonlinear variations with different oxidant conditions, which is controlled by the synergetic effects of multiple oxidants. When limonene is not consumed, adding another oxidant with oxidation pathway will increase limonene-derived ON due to increased consumption of limonene. When limonene is completely consumed, limonene-derived ON production is dominated by competition of oxidation pathways. The production of limonene-derived ON is increased by the O3-initiated oxidation pathway, while it is decreased by the OH and NO3-initiated oxidation pathway. This is mainly because limonene oxidized by O3 produces more ON than OH and NO3, resulting from the simulation under individual initial oxidation pathway.
The global model simulation indicates that the oxidation process is important for limonene-derived ON formation in addition to limonene concentration. Global limonene-derived ON burden decreases by 19.9 % and 17.3 % due to the O3- and NO3-initiated oxidation pathway, while the OH-initiated oxidation pathway increases global limonene-derived ON burden by 44.7 % compared to the case only including the other two oxidation pathways. These differences can be attributed to the complex nonlinear response of limonene-derived ON yield to different reaction pathways under varying precursor and oxidant conditions.
The chemical mechanism of ON formation may influence the formation and spatial distribution of ON. We only include the main oxidation processes published to date in the model, while some pathways (i.e., heterogeneous NO3 reactions) of ON are missing in this work. Gas-phase oxidation in our mechanism is considered the dominant formation pathway of ON (Fan et al., 2022; Perring et al., 2013). Future inclusion of newly identified and quantified ON chemistry may lead to unpredictable nonlinear impacts on simulation outcomes. Although uncertainties remain in simulating limonene-derived ON due to limited knowledge of its formation mechanism, this work offers an improvement in the global model's ability to simulate ON and presents a methodological framework for simulating SOA and their chemical processes. This framework can be used in the future to improve SOA burden predictions and provide a comprehensive understanding of the complex interactions between multiple oxidation pathways, which are crucial for SOA formation (Chen et al., 2022; Zang et al., 2024). Quantitative understanding of these complex interactions in contributing to SOA formation can definitely facilitate better understanding of the contributions of interactions and antagonistic actions between anthropogenic and natural emissions to atmospheric aerosols. This work provides valuable insights for making more effective secondary aerosol pollution control strategies to improve air quality.
Simulation data are available upon request to the corresponding authors.
The supplement related to this article is available online at https://doi.org/10.5194/acp-25-9249-2025-supplement.
QG and JZ designed the study, developed the chemical box model and global model, conducted the simulations, analyzed the data, and wrote the manuscript. HZ and BL provided the laboratory data. PF, LC, YS, HL, YL and YX contributed to the discussion and revision of the paper.
The contact author has declared that none of the authors has any competing interests.
Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. While Copernicus Publications makes every effort to include appropriate place names, the final responsibility lies with the authors. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.
This article is part of the special issue “Atmospheric Chemistry of the Suburban Forest – multiplatform observational campaign of the chemistry and physics of mixed urban and biogenic emissions”. It is not associated with a conference.
The authors acknowledge the financial support of the National Natural Science Foundation of China.
This study was supported by the National Natural Science Foundation of China (grant no. 42177082).
This paper was edited by Zhibin Wang and reviewed by three anonymous referees.
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