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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-26-7949-2026</article-id><title-group><article-title>Prognostic modeling of total specific humidity variance induced by shallow convective clouds in a GCM</article-title><alt-title>Modeling of humidity variance in a GCM</alt-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>d'Alençon</surname><given-names>Louis</given-names></name>
          <email>louis.dalencon@lmd.ipsl.fr</email>
        <ext-link>https://orcid.org/0000-0003-0389-5375</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Hourdin</surname><given-names>Frédéric</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2083-8647</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Rio</surname><given-names>Catherine</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>LMD/IPSL/Sorbonne Université, CNRS, Paris 75005, France</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>CNRM, Université de Toulouse, Météo-France, CNRS, Toulouse, France</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Louis d'Alençon (louis.dalencon@lmd.ipsl.fr)</corresp></author-notes><pub-date><day>10</day><month>June</month><year>2026</year></pub-date>
      
      <volume>26</volume>
      <issue>11</issue>
      <fpage>7949</fpage><lpage>7966</lpage>
      <history>
        <date date-type="received"><day>21</day><month>November</month><year>2025</year></date>
           <date date-type="rev-request"><day>17</day><month>December</month><year>2025</year></date>
           <date date-type="rev-recd"><day>13</day><month>April</month><year>2026</year></date>
           <date date-type="accepted"><day>14</day><month>April</month><year>2026</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2026 Louis d'Alençon et al.</copyright-statement>
        <copyright-year>2026</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/26/7949/2026/acp-26-7949-2026.html">This article is available from https://acp.copernicus.org/articles/26/7949/2026/acp-26-7949-2026.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/26/7949/2026/acp-26-7949-2026.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/26/7949/2026/acp-26-7949-2026.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d2e106">Shallow convective cloud cover prediction is a critical element of climate modeling. In most global climate models (GCMs), the cloud scheme relies on a statistical description of the atmospheric water content. While the mean value of specific humidity is a standard output of the climate model, the upper moments, in particular the variance and skewness, must be prescribed by a dedicated model. Observations and large eddy simulations (LES) have shown that the asymmetry of water distribution is linked to the presence of organized convective cells. To capture this asymmetry, the boundary layer convective cells are represented in this work by an eddy diffusivity mass flux model, coupled to a bi-Gaussian statistical cloud scheme. Previously, the variance of each component has been prescribed diagnostically from the difference in specific humidity between updrafts and environment. This cloud scheme has demonstrated its capacity to represent dry shallow convective boundary layers, however, it reveals significant inaccuracies in deep convection situations and in the prediction of skewness. We propose here to develop a prognostic model for the total specific humidity variance. We show in particular that the transport of specific humidity and its square in the mass-flux scheme permits to implement the generic prognostic equations of the variance into a GCM. Furthermore, model adjustment is carried out using recently added automatic tuning methods. Based on this adjustment, we show that the prognostic model is consistent with previous work on shallow convective cases while providing significant improvements in the description of variance and third-order moment profiles.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d2e118">The importance of cloud representation in the radiative budget of the earth is widely documented <xref ref-type="bibr" rid="bib1.bibx3 bib1.bibx47 bib1.bibx58" id="paren.1"/> which has led climate modelers to integrate increasingly accurate cloud schemes in global climate models. Among these cloud schemes, a classical approach consists of building a sub-grid distribution of the (total or relative) humidity or of another thermodynamic quantity such as the saturation deficit <xref ref-type="bibr" rid="bib1.bibx33 bib1.bibx45 bib1.bibx23" id="paren.2"/>, which allows to characterize a saturated fraction of the mesh defining the cloud fraction. These distributions were gradually refined in their form, they were first symmetrical (triangle in <xref ref-type="bibr" rid="bib1.bibx44" id="text.3"/>, rectangle in <xref ref-type="bibr" rid="bib1.bibx30" id="text.4"/>) before observation and large-eddy simulations (LES) studies have shown the importance of asymmetrical distribution especially in the convective boundary layer with cumulus clouds <xref ref-type="bibr" rid="bib1.bibx29 bib1.bibx27" id="paren.5"/>. Therefore it became essential to capture this asymmetry leading to various forms of the probability density functions (PDF) with non-zero skewness such as log-normal in <xref ref-type="bibr" rid="bib1.bibx2" id="text.6"/>, beta in <xref ref-type="bibr" rid="bib1.bibx50" id="text.7"/> or bi-Gaussian distributions in <xref ref-type="bibr" rid="bib1.bibx16" id="text.8"/> or <xref ref-type="bibr" rid="bib1.bibx23" id="text.9"/>. The modeling of the moments of the distribution has also evolved: first a priori <xref ref-type="bibr" rid="bib1.bibx44 bib1.bibx30" id="paren.10"/> then diagnosed <xref ref-type="bibr" rid="bib1.bibx2 bib1.bibx23" id="paren.11"/> from thermodynamical variables or prognosed <xref ref-type="bibr" rid="bib1.bibx50 bib1.bibx54" id="paren.12"/> with various closure hypothesis. It has been therefore necessary to develop a good understanding of the physical sources of these distribution moments, in particular to close the higher-order terms related to turbulent transport.</p>
      <p id="d2e159">One approach for the determination of the moments of the subgrid water distribution in a GCM is to rely on the parameterziation of subgrid turbulent or convective transport. Most GCMs include a parametrisation of turbulent diffusion, the eddy diffusivity relying most often today on a prognostic equation of the turbulent kinetic energy <xref ref-type="bibr" rid="bib1.bibx34" id="paren.13"/>. Whatever the sophistication of the  computation of the eddy diffusivity however, this approach assumes a symmetrical distribution of turbulent motions resulting in downgradient transport. Though, alongside turbulent diffusion, the importance of convective structures carrying out non-local countergradient transport has long been established <xref ref-type="bibr" rid="bib1.bibx11" id="paren.14"/>. In fact, this non-local transport is a key element in explaining the asymmetry of the distributions that was highlighted before. Several approaches exist to represent this non-local transport by using for example a joint bi-Gaussian PDF of velocity, liquid potential temperature and total specific humidity with higher-order closure <xref ref-type="bibr" rid="bib1.bibx15 bib1.bibx16 bib1.bibx27" id="paren.15"/>. In this work we place ourselves within the framework of so-called mass flux schemes to represent non-local transport by organized convective plumes. The association of a mass flux scheme with a classical <inline-formula><mml:math id="M1" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula>-diffusion theory modeling small-scale turbulence <xref ref-type="bibr" rid="bib1.bibx34 bib1.bibx57" id="paren.16"/>, has led to the so-called “eddy diffusivity mass flux” (EDMF) models, an idea initially proposed by <xref ref-type="bibr" rid="bib1.bibx6" id="text.17"/>, first tested by <xref ref-type="bibr" rid="bib1.bibx19" id="text.18"/> and widely disseminated since <xref ref-type="bibr" rid="bib1.bibx25 bib1.bibx39 bib1.bibx37 bib1.bibx35" id="paren.19"/>.</p>
      <p id="d2e191">In the Laboratoire de Météorologie Dynamique atmospheric model (LMDZ), the EDMF scheme is associated with a bi-Gaussian statistical model of total specific humidity to determine cloud fraction for all clouds except those created by the deep convection scheme. The humidity variance within each Gaussian component is diagnosed from the specific humidity difference between the ascending plumes and the environment, while the asymmetry of the distribution is related to the relative weight of each Gaussian, given by the surface fraction of the updrafts. This cloud scheme has proven to be very effective in representing convective boundary layers with cloud formation at the tops of ascending plumes so as cumulus and stratocumulus clouds <xref ref-type="bibr" rid="bib1.bibx23 bib1.bibx21 bib1.bibx22 bib1.bibx31" id="paren.20"/>. In this scheme however, when the thermal plumes are absent or weak, the subgrid distribution reduces to a single gaussian, with a width imposed as a constant times the total water. In some cases with coexistence of shallow and deep convection, the bad representation of clouds in single columns simulations with LMDZ led us to hypothesize that the Gaussian width may be underestimated due to the omission of other sources of subgrid variance than thermal plumes as arising for instance from the detrainment of deep convection or from precipitating downdrafts. The importance of the detrainment terms of convective air masses, in particular, was demonstrated in <xref ref-type="bibr" rid="bib1.bibx24" id="text.21"/> (thereafter K05) based on CRM studies, after establishing the corresponding source terms in the prognostic equation of variance. Rather than adding ad-hoc diagnostic terms of variance with more free parameters, our main objective in this work is to present the implementation of K05's prognostic approach within a GCM, which has not been achieved yet. In fact K05 doubted the feasibility of implementing his developments in large-scale models because of the lack of information on the variance in the thermal plume scheme. Relying on an original methodology to circumvent this difficulties by transporting the specific humidity and its square within the thermal plume scheme, we propose here to integrate into a GCM the complete coupling of the mass flux scheme to the statistical cloud scheme via a prognostic variance equation. This approach allow us to build up a unified vision of the variance evolution and its sources with very limited free parameters. We focus here on the implementation of this prognostic model in the context of shallow convection. This first step is important to lay the theoretical and methodological foundations of the new model and to compare it to the pre-existing model and to LES in cumulus and stratocumulus scenes for which a robust tuning strategy has been developed <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx22" id="paren.22"/>. This tuning process employs statistical learning tools based on Bayesian inference models. The principle is to use a set of one-dimensional (1D) simulations of the model to produce a Gaussian statistical emulator of some specific metrics over the whole space of parameters. These metrics are then compared to LES simulations to determine a subspace of satisfactory parameters.</p>
      <p id="d2e203">The paper is organized as follows. Section 2 presents a description of the LMDZ model setup and the methods used to develop and calibrate the prognostic parameterization, Sect. 3 presents the theoretical framework in which the prognostic model is developed, in particular the method leading to its integration into the convective transport scheme. Section 4 documents the results obtained after tuning the free parameters of the prognostic model, especially concerning cloud fraction and specific humidity variance and skewness as well as comparisons with the previous model and discussions on the different sources of variability.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Model and methods</title>
      <p id="d2e214">In this part, we present the LMDZ model as well as the experimental methodologies and the principle of semi-automatic tuning used to calibrate and develop the prognostic physical parameterization.</p>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>The LMDZ model</title>
      <p id="d2e224">The parameterization presented in this paper is tested and integrated into the global climate model of Laboratoire de Météorologie Dynamique LMDZ. LMDZ is the atmospheric component of the IPSL coupled atmosphere-ocean model, IPSL-CM, used in particular for the CMIP exercises. Concerning boundary layer subgrid scale vertical transport, LMDZ combines a <inline-formula><mml:math id="M2" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula>-diffusion model based on a prognostic equation of the turbulent kinetic energy (TKE) with a mass flux parameterization <xref ref-type="bibr" rid="bib1.bibx39" id="paren.23"/>. This so-called “thermal plume model” and its coupling to a bi-Gaussian cloud scheme <xref ref-type="bibr" rid="bib1.bibx23" id="paren.24"/> is presented in Sect. <xref ref-type="sec" rid="Ch1.S3.SS1"/>, <xref ref-type="sec" rid="Ch1.S3.SS2"/> and <xref ref-type="sec" rid="Ch1.S3.SS3"/> as it is an essential element of the proposed parameterization. Deep convection on the other hand is modeled by the Emanuel's scheme <xref ref-type="bibr" rid="bib1.bibx12 bib1.bibx13" id="paren.25"/> in interaction with an original parameterization of cold pools created by reevaporation of convective rainfall <xref ref-type="bibr" rid="bib1.bibx17 bib1.bibx40" id="paren.26"/>. The LMDZ6A configuration used here, developed for CMIP6, includes developments in many aspects of the model <xref ref-type="bibr" rid="bib1.bibx31" id="paren.27"/> compared to previous CMIP5 configurations, as for example a modification of the thermal plume detrainment which led to a significant improvement of stratocumulus representation <xref ref-type="bibr" rid="bib1.bibx21" id="paren.28"/>. The LMDZ model is a flexible tool which contains in particular a single column model (SCM) version. The SCM is extensively used for parameterization development, assesment and tuning based on 1D/LES comparisons.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>The LES cases</title>
      <p id="d2e267">The 1D/LES strategy is applied here with LES cases that embrace shallow convection scenes over earth and ocean as well as stratocumulus/cumulus transitions cases. These test cases were widely used in the development of the thermal plume model <xref ref-type="bibr" rid="bib1.bibx39" id="paren.29"/>, the bi-Gaussian cloud scheme <xref ref-type="bibr" rid="bib1.bibx23" id="paren.30"/> and the modified formulation of the thermal plume detrainment <xref ref-type="bibr" rid="bib1.bibx21" id="paren.31"/>. They will be refered as IHOP/REF, ARMCU/REF, RICO/REF and SANDU/REF, FAST and SLOW and we will briefly recall the context of these different 1D cases.</p>
      <p id="d2e279">IHOP comes from observations carried out during the International H<sub>2</sub>O  project on 14 June 2002 on the Great Plains <xref ref-type="bibr" rid="bib1.bibx7" id="paren.32"/>. It represents an almost cloudless boundary layer.</p>
      <p id="d2e294">The ARM case is derived from observations collected on 21 June 1997 at the Atmospheric Radiation Measurement site in Oklahoma, USA <xref ref-type="bibr" rid="bib1.bibx5" id="paren.33"/>. It represents a typical diurnal cycle of the shallow convective boundary layer with appearance of a few cumuli clouds in the middle of the day.</p>
      <p id="d2e300">The RICO case (Rain In Cumulus over the Ocean, <xref ref-type="bibr" rid="bib1.bibx52" id="altparen.34"/>) is a case of shallow cumuli clouds over the ocean characterized by frequent precipitation.</p>
      <p id="d2e307">Finally, the SANDU REF, FAST and SLOW cases are described in <xref ref-type="bibr" rid="bib1.bibx42" id="text.35"/>. They were built by compositing the large-scale conditions encountered along a set of individual Lagrangian 3 d trajectories performed for the northeastern Pacific during the summer months of 2006 and 2007. They are meant to represent oceanic boundary layers overhung by stratocumulus clouds which become thinner with a gradual transition to shallow cumulus. REF, FAST and SLOW refer to different configurations involving more or less rapid transitions.</p>
      <p id="d2e313">LES reference simulations used in this study have been performed with the MESO-NH non-hydrostatic model <xref ref-type="bibr" rid="bib1.bibx26" id="paren.36"/> for the IHOP, ARM and RICO cases. The LES used as a reference for the SANDU case is the one performed with the UCLA LES <xref ref-type="bibr" rid="bib1.bibx46" id="paren.37"/> and described in <xref ref-type="bibr" rid="bib1.bibx42" id="text.38"/>.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Model calibration</title>
      <p id="d2e333">As explained in <xref ref-type="bibr" rid="bib1.bibx20" id="text.39"/>, the calibration of the parameterizations of a GCM is a very sensitive step in climate modeling with the multiplication of sub-grid schemes and their associated free parameters. In LMDZ the calibration is done in successive stages from the scale of individual parameterization to the scale of the Earth's climate system as a whole. To facilitate this multi step and multi parameter tuning, automatic tuning techniques were developed <xref ref-type="bibr" rid="bib1.bibx55 bib1.bibx56 bib1.bibx9 bib1.bibx22" id="paren.40"/> based on the “history matching” approach, implemented in the “High-Tune explorer” or <monospace>htexplo</monospace> tool. The tool explores the model parameter space in successive waves and build an emulator of given metrics. Once this emulator is built, the parameter space is reduced at each wave according to the gap between the emulated values of the metrics and the target values of the LES. This tuning process on 1D simulations not only makes it possible to significantly reduce the parameter space but it also permits to focus and improve our understanding of the physical processes involved in the parameterizations and thus to adapt the underlying modeling work. More than a simple statistical calibration tool, it is therefore a real working support for the modeler. SCM tuning is then completed by one or several 3D waves.</p>
      <p id="d2e345">Based on this approach, and using the previous mentioned 1D cases, <xref ref-type="bibr" rid="bib1.bibx22" id="text.41"/> were able to finely calibrate the key parameterizations on which we step on in the present work, the thermal plume parameterization and the cloud scheme. Here, we will reinvest the same tuning approach in order to obtain reliable and consistent comparison criteria with previous work.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Thermal and cloud parameterization in LMDZ</title>
      <p id="d2e360">In this part, we describe the implementation of the variance prognostic model within the statistical cloud scheme. In LMDZ, the asymmetry of the total specific humidity distribution is captured by a bi-Gaussian PDF. One Gaussian is associated with the distribution within the thermal plumes and the other one within the environment of the plumes. The mass-flux scheme representing the thermal plumes and the statistical cloud scheme are therefore strongly coupled through the parameters of the PDF, and they will be even more so through the establishment of the prognostic equation of the variance. Thus, we will start this section by presenting the mass-flux parameterization of the updrafts before introducing the statistical cloud scheme, in which the specific humidity variance model is integrated.</p>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>The thermal plume model</title>
      <p id="d2e370">Let <inline-formula><mml:math id="M4" display="inline"><mml:mi mathvariant="italic">ψ</mml:mi></mml:math></inline-formula> be a conservative variable, <inline-formula><mml:math id="M5" display="inline"><mml:mi mathvariant="bold-italic">v</mml:mi></mml:math></inline-formula> the wind field and <inline-formula><mml:math id="M6" display="inline"><mml:mi mathvariant="italic">ρ</mml:mi></mml:math></inline-formula> the density. Using an Reynolds decomposition of the physical quantities <inline-formula><mml:math id="M7" display="inline"><mml:mi mathvariant="italic">ψ</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M8" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> and in the case of non-viscous transport, we can write:

            <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M10" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mo mathvariant="bold">.</mml:mo><mml:mi mathvariant="bold-italic">g</mml:mi><mml:mi mathvariant="bold-italic">r</mml:mi><mml:mi mathvariant="bold-italic">a</mml:mi><mml:mi mathvariant="bold-italic">d</mml:mi><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mtext>div</mml:mtext><mml:mfenced open="(" close=")"><mml:mover accent="true"><mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi><mml:msup><mml:mi>w</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mfenced></mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>

          The first term on the right-hand side is the tendency due to large-scale advection, computed by the dynamical core of the model. The second term is the tendency due to turbulent transport. It is computed in LMDZ as the sum of a <inline-formula><mml:math id="M11" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula>-diffusive term and a mass flux term:

            <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M12" display="block"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi><mml:msup><mml:mi>w</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mi>K</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>f</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e573">The <inline-formula><mml:math id="M13" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula>-diffusion term follows <xref ref-type="bibr" rid="bib1.bibx34" id="text.42"/> and includes a prognostic equation for the TKE. The mass flux transport relies on the so-called thermal plume model <xref ref-type="bibr" rid="bib1.bibx19 bib1.bibx39 bib1.bibx41" id="paren.43"/>. It is activated only if the surface layer is unstable and relies on an original closure in Convective Availabale Potential Energy (CAPE) described by <xref ref-type="bibr" rid="bib1.bibx19" id="text.44"/>. It represents a population of thermal plumes through a single equivalent thermal plume with vertical velocity <inline-formula><mml:math id="M14" display="inline"><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> and surface fraction <inline-formula><mml:math id="M15" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>. The vertical variation of the convective mass flux <inline-formula><mml:math id="M16" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M17" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi mathvariant="italic">α</mml:mi><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula>, assumed stationary during one physics time step, is related to a lateral entrainment <inline-formula><mml:math id="M19" display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula> and detrainment <inline-formula><mml:math id="M20" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula> through a mass conservation equation:

            <disp-formula id="Ch1.E3" content-type="numbered"><label>3</label><mml:math id="M21" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>f</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi>e</mml:mi><mml:mo>-</mml:mo><mml:mi>d</mml:mi></mml:mrow></mml:math></disp-formula>

          The value of variable <inline-formula><mml:math id="M22" display="inline"><mml:mi mathvariant="italic">ψ</mml:mi></mml:math></inline-formula> within the thermal plume, noted <inline-formula><mml:math id="M23" display="inline"><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula>, is given by the conservation equation:

            <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M24" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>f</mml:mi><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi>e</mml:mi><mml:mover accent="true"><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mi>d</mml:mi><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi>S</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M25" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> is a source term for variable <inline-formula><mml:math id="M26" display="inline"><mml:mi mathvariant="italic">ψ</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M27" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M28" display="inline"><mml:mo>≡</mml:mo></mml:math></inline-formula> 0 for a conserved variable).</p>
      <p id="d2e798">The entrainment rate <inline-formula><mml:math id="M29" display="inline"><mml:mi mathvariant="italic">ϵ</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M30" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M31" display="inline"><mml:mrow><mml:mi>e</mml:mi><mml:mo>/</mml:mo><mml:mi>f</mml:mi></mml:mrow></mml:math></inline-formula> depends positively upon the plume buoyancy <inline-formula><mml:math id="M32" display="inline"><mml:mi>B</mml:mi></mml:math></inline-formula>, according to the following equation:

            <disp-formula id="Ch1.E5" content-type="numbered"><label>5</label><mml:math id="M33" display="block"><mml:mrow><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>=</mml:mo><mml:mo movablelimits="false">max⁡</mml:mo><mml:mfenced open="[" close="]"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>B</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi>B</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced open="(" close=")"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>A</mml:mi><mml:mn mathvariant="normal">1</mml:mn><mml:mi>B</mml:mi></mml:mrow><mml:mrow><mml:msup><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mi>A</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:mi>A</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mi>B</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mi>A</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> are tunable parameters.</p>
      <p id="d2e929">The presence of parameters <inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:mi>A</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mi>A</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> in the computation of entrainment comes from the source term of the conservation equation for the vertical momentum (Eq. <xref ref-type="disp-formula" rid="Ch1.E4"/>, with <inline-formula><mml:math id="M39" display="inline"><mml:mi mathvariant="italic">ψ</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M40" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M41" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula>). This source term reads <inline-formula><mml:math id="M42" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M43" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:mi>A</mml:mi><mml:mn mathvariant="normal">1</mml:mn><mml:mi>B</mml:mi><mml:mo>-</mml:mo><mml:mi>A</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> and is the sum of a buoyancy and drag terms. Note that the plume fraction <inline-formula><mml:math id="M45" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula> is computed at each vertical level as <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mi>f</mml:mi><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ρ</mml:mi><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula>), <inline-formula><mml:math id="M47" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> being computed from the mass conservation equation and <inline-formula><mml:math id="M48" display="inline"><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> from this vertical momentum conservation equation.</p>
      <p id="d2e1073">For a given value of <inline-formula><mml:math id="M49" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula>, the source term in the vertical momentum conservation equation, parameter <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mi>B</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> (taking values in <inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>) controls whether the plume velocity increases rapidly with no lateral entrainment <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>B</mml:mi><mml:mn mathvariant="normal">1</mml:mn><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> or increases less rapidly with strong lateral entrainment of air from the environment, assumed at rest (large values of <inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:mi>B</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>).</p>
      <p id="d2e1137">The detrainment rate, <inline-formula><mml:math id="M54" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M55" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M56" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>/</mml:mo><mml:mi>f</mml:mi></mml:mrow></mml:math></inline-formula>, is mainly positive in the regions where the buoyancy is negative and reads

            <disp-formula id="Ch1.E6" content-type="numbered"><label>6</label><mml:math id="M57" display="block"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>=</mml:mo><mml:mo movablelimits="false">max⁡</mml:mo><mml:mfenced close="]" open="["><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>A</mml:mi><mml:mn mathvariant="normal">1</mml:mn><mml:mo>×</mml:mo><mml:mi>B</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi>B</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi>B</mml:mi><mml:mo>*</mml:mo></mml:msup></mml:mrow><mml:mrow><mml:msup><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>C</mml:mi><mml:mi>Q</mml:mi><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>/</mml:mo><mml:msub><mml:mi>w</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">0.5</mml:mn></mml:msup></mml:mrow></mml:mfenced></mml:mrow></mml:math></disp-formula>

          with <inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M59" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 1 m s<sup>−1</sup>. <inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the contrast in humidity between the plume and its environment, and <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:mi>C</mml:mi><mml:mi>Q</mml:mi></mml:mrow></mml:math></inline-formula> is a tunable parameter. The <inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:mi>C</mml:mi><mml:mi>Q</mml:mi></mml:mrow></mml:math></inline-formula> term was introduced to represent in part the enhancement of detrainment by the negative buoyancy subsequent to the evaporation of cloud water. The term is however active below the cloud as well. Note that a more physical parameterization of this <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:mi>C</mml:mi><mml:mi>Q</mml:mi></mml:mrow></mml:math></inline-formula> term is currently under development.</p>
      <p id="d2e1352">The computation of the buoyancy in the detrainment formulation reads:

            <disp-formula id="Ch1.E7" content-type="numbered"><label>7</label><mml:math id="M65" display="block"><mml:mrow><mml:msup><mml:mi>B</mml:mi><mml:mo>*</mml:mo></mml:msup><mml:mo>=</mml:mo><mml:mi>g</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mrow><mml:mi mathvariant="normal">v</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">th</mml:mi></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mrow><mml:mi>z</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:mi>z</mml:mi></mml:mrow></mml:mfenced></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>z</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">δ</mml:mi><mml:mi>z</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M66" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the virtual potential temperature. In this formula, the buoyancy is computed by comparing the plume internal properties  at altitude <inline-formula><mml:math id="M67" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> with the environment at altitude, <inline-formula><mml:math id="M68" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M69" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula>, with <inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M72" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:mi>D</mml:mi><mml:mi>Z</mml:mi><mml:mo>×</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:mi>D</mml:mi><mml:mi>Z</mml:mi></mml:mrow></mml:math></inline-formula> being an adjustable parameter as well). This modification enabled the thermal plume model to simulate correctly the stratocumulus and transition cases, by making the plume “aware” of the top boundary layer inversion before reaching it, thus increasing artificially detrainment just below. As explained in <xref ref-type="bibr" rid="bib1.bibx21" id="text.45"/>, it may in part account for the fact that the air detrained at a given level has followed an overshoot and then a rapid downward motion, as occuring in fountains structures above stratocumulus or in so-called subsiding shells created around cumulus clouds by reevaporation of the detrained cloud water.</p>
      <p id="d2e1513">For the derivation of the variance model, below, we use the following Eq. (<xref ref-type="disp-formula" rid="Ch1.E8"/>), obtained by combining Eqs. (<xref ref-type="disp-formula" rid="Ch1.E1"/>) and (<xref ref-type="disp-formula" rid="Ch1.E2"/>) without the diffusive term:

            <disp-formula id="Ch1.E8" content-type="numbered"><label>8</label><mml:math id="M75" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>d</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ψ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>f</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">ψ</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>

          The first term on the right-hand is the tendency due to the thermal detrainment towards the environment, the second term is the tendency associated with the compensatory subsidence in the environment, the impact of which depends on the vertical gradient of the variable in the environment. Because the mass flux <inline-formula><mml:math id="M76" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> is positive, a positive vertical gradient of the physical variable results in a positive tendency, as air with larger values of <inline-formula><mml:math id="M77" display="inline"><mml:mi mathvariant="italic">ψ</mml:mi></mml:math></inline-formula> is transported downward by subsidence. Here the fact that the tendency of the variable does not depend on entrainment is linked to the assumption that the entrained air is the average air of the environment. This hypothesis, which may be questioned, notably by investigating the impact of subsiding shells on the thermodynamic properties of the air in the vicinity of cumulus clouds <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx53 bib1.bibx32" id="paren.46"/>, simplifies both mean and variance equation.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>The cloud scheme</title>
      <p id="d2e1618">The LMDZ statistical cloud scheme is based on a bi-Gaussian PDF of saturation deficit in the presence of thermals <xref ref-type="bibr" rid="bib1.bibx23" id="paren.47"/>. The saturation deficit is given by <inline-formula><mml:math id="M78" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M79" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>l</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">sat</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">l</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> where <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the liquid temperature, <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the total specific humidity, <inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">sat</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the total specific humidity at saturation and <inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is a factor depending on thermodynamic variables defined in <xref ref-type="bibr" rid="bib1.bibx33" id="text.48"/> and <xref ref-type="bibr" rid="bib1.bibx45" id="text.49"/>. The bi-Gaussian PDF of the deficit at saturation reads:

            <disp-formula id="Ch1.E9" content-type="numbered"><label>9</label><mml:math id="M85" display="block"><mml:mrow><mml:mtext>PDF</mml:mtext><mml:mo>(</mml:mo><mml:mi>s</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:mi mathvariant="script">G</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mi>s</mml:mi><mml:mo>,</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mi mathvariant="script">G</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mi>s</mml:mi><mml:mo>,</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M86" display="inline"><mml:mi mathvariant="script">G</mml:mi></mml:math></inline-formula> is a Gaussian function of the variable s with mean value <inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and variance <inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> in the environment and <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> inside the thermal plume, <inline-formula><mml:math id="M91" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula> being the fraction of the grid covered by the thermal plume. Because the fraction covered by thermal plumes is small (<inline-formula><mml:math id="M92" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M93" display="inline"><mml:mo>≪</mml:mo></mml:math></inline-formula> 1) and the thermal plumes are moister than their environment (<inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M95" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), this distribution is positively skewed. We should notice that this PDF fails representing the negative asymmetry that may appear due to the presence of organised downward plumes within the compensatory subsidence. These plumes are however generally less organized than the ascending plumes forced by surface energy fluxes, and the asymmetry induced is also predominant near the surface, far from the boundary layer top where cumulus or stratocumulus clouds form.</p>
      <p id="d2e1913">With this choice of PDF, using the thermal plume fraction <inline-formula><mml:math id="M97" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula> to fix the weights of each Gaussian term, the variance and skewness of the saturation deficit are determined by the following equations being given the standard deviations <inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the mean values in both environment and thermals (the detailed derivation being given in Appendix A).

                <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M100" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E10"><mml:mtd><mml:mtext>10</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>V</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E11"><mml:mtd><mml:mtext>11</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi>S</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">α</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi mathvariant="italic">α</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:msup><mml:mi>V</mml:mi><mml:mfrac><mml:mn mathvariant="normal">3</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d2e2165">Once the PDF is given, the cloud fraction <inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> of the mesh and the cloud water content <inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> can be computed as:

                <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M103" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E12"><mml:mtd><mml:mtext>12</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mi mathvariant="normal">∞</mml:mi></mml:munderover><mml:mtext>PDF</mml:mtext><mml:mo>(</mml:mo><mml:mi>s</mml:mi><mml:mo>)</mml:mo><mml:mi mathvariant="normal">d</mml:mi><mml:mi>s</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E13"><mml:mtd><mml:mtext>13</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">c</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mi mathvariant="normal">∞</mml:mi></mml:munderover><mml:mi>s</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>PDF</mml:mtext><mml:mo>(</mml:mo><mml:mi>s</mml:mi><mml:mo>)</mml:mo><mml:mi mathvariant="normal">d</mml:mi><mml:mi>s</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d2e2266">If the mean values of the saturation deficit in the updrafts and in the environment are explicitly calculated in the GCM, it remains to determine the values of the standard deviations in order to close this cloud scheme.</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>The original diagnostic variance model</title>
      <p id="d2e2277">In the current diagnostic version, the standard deviations of humidity in thermals and the environment are parameterized as follows:

            <disp-formula id="Ch1.E14" content-type="numbered"><label>14</label><mml:math id="M104" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>B</mml:mi><mml:mi>G</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.01</mml:mn><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mi>b</mml:mi><mml:msub><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></disp-formula>

          and

            <disp-formula id="Ch1.E15" content-type="numbered"><label>15</label><mml:math id="M105" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>B</mml:mi><mml:mi>G</mml:mi><mml:mn mathvariant="normal">1</mml:mn><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mi mathvariant="italic">α</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:msup></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mi>b</mml:mi><mml:msub><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

          <inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:mi>B</mml:mi><mml:mi>G</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M107" display="inline"><mml:mrow><mml:mi>B</mml:mi><mml:mi>G</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>  and <inline-formula><mml:math id="M110" display="inline"><mml:mi>b</mml:mi></mml:math></inline-formula> being tunable parameters. This specific parameterization of the variance is based on a  heuristic reasoning using the exchange surface and the specific humidity difference between the thermals and the environment <xref ref-type="bibr" rid="bib1.bibx23" id="paren.50"/>. Our aim is to replace this multiparameter heuristic parameterization with a parameterization based on a well-established variance equation including all the air mass exchanges.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>The variance prognostic model</title>
      <p id="d2e2487">Equation (<xref ref-type="disp-formula" rid="Ch1.E8"/>) cannot apply to the variance of a variable because the variance is not conservative. Analytical equations for the variance evolution in the presence of detraining mass fluxes have been proposed by K05 with one single plume, or by <xref ref-type="bibr" rid="bib1.bibx49" id="text.51"/> for a general formalism with <inline-formula><mml:math id="M111" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> plumes. However their implementation in the climate model requires knowledge of the humidity variance in thermals. Although this is not an insurmountable difficulty in our model where it is predicted, we have chosen to implement a more straightforward, but theoretically equivalent, methodology consisting in transporting <inline-formula><mml:math id="M112" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> within the mass flux scheme. Let us first write the evolution of the variance of the total specific humidity in terms of <inline-formula><mml:math id="M114" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> et <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>:

            <disp-formula id="Ch1.E16" content-type="numbered"><label>16</label><mml:math id="M116" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:msup><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e2655">To compute the convective variance tendency we only need knowledge of the mean total specific humidity <inline-formula><mml:math id="M117" display="inline"><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula>, its convective tendency <inline-formula><mml:math id="M118" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula> and the convective tendency of the total specific humidity square <inline-formula><mml:math id="M119" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula>. <inline-formula><mml:math id="M120" display="inline"><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> and <inline-formula><mml:math id="M121" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula> are already calculated in the thermal plume model, therefore only <inline-formula><mml:math id="M122" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula> remains to be estimated. Noting that the total specific humidity is treated as a conservative variable in the thermal plume transport model, we initially assumed that its square is also conservative. Indeed, the material derivative of a squared quantity is zero if the material derivative of this quantity is zero. We would then be justified in transporting the square of the total specific humidity as a conservative tracer, just like the total specific humidity itself. However, the square is not a purely conserved quantity within the thermal plume because air parcels entering with a different humidity will mix. To subsequently account for this mixing, we added a relaxation term to the thermal plume equation.</p>
      <p id="d2e2767">To compute Eq. (<xref ref-type="disp-formula" rid="Ch1.E16"/>) in our first conservative approach (without the relaxation term) we only have to call the plume transport routine for both total humidity and its square, instead of just the first one, with no need to implement explicit equations. The consistency of this approach can be checked by deriving the analytical development which joins and provides another perspective on the K05's formalism of variance transport. Applying the Eq. (<xref ref-type="disp-formula" rid="Ch1.E8"/>) both to <inline-formula><mml:math id="M123" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, we obtain:

            <disp-formula id="Ch1.E17" content-type="numbered"><label>17</label><mml:math id="M125" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>d</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>f</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mfenced open="[" close="]"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>d</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>f</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e2939">Subsidence terms combine as follows: <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>f</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>f</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>f</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>. Detrainment terms can also be rearranged: <inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. And the convective variance tendency finally reads:

            <disp-formula id="Ch1.E18" content-type="numbered"><label>18</label><mml:math id="M128" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>d</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mfenced open="[" close="]"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>f</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e3276">This approach leads to a similar equation that K05 derives from the mixing of two air masses and its impact on the humidity variance in the environment. This is not surprising because both approaches ultimately rely on the air mass conservation equations. In the present formalism we can underline the absence of the entrainment term, due to the already mentioned fact that we assumed that the entrained air had the average composition of the  environment. We can interpret the different terms of the Eq. (<xref ref-type="disp-formula" rid="Ch1.E18"/>) as follows: <list list-type="bullet"><list-item>
      <p id="d2e3283">The first term represents the impact of the mean values difference between the thermal plume and the environment</p></list-item><list-item>
      <p id="d2e3287">The second one expresses the impact of the variances difference between the thermal plume and the environment</p></list-item><list-item>
      <p id="d2e3291">The last one expresses the vertical transport of variance due to compensatory subsidence. Since the mass flux is positive, this term implies that a positive vertical gradient of variance contributes positively to the variance budget at the level considered. In physical terms, a larger variance at an upper level will tend to enhance the variance at the level below, and conversely, a smaller variance above will reduce it.</p></list-item></list></p>
      <p id="d2e3294">This variance transport equation is limited so far to organized convective sources which are supposed to be dominant in the studied cases, it could subsequently include however the diffusive terms, computed with the same approach by calling the diffusive transport model for both <inline-formula><mml:math id="M129" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>. We could also include possible source/sink terms due to evaporation of precipitation for instance, or large-scale advection. This will be the subject of forthcoming publication. Here we place ourselves in a framework where the transport of variance is carried out by the organized convective terms and we only add a classical exponential dissipation term representing the small scale homogenization processes which will be discussed in Sect. <xref ref-type="sec" rid="Ch1.S3.SS5"/>. The present model finally reads:

            <disp-formula id="Ch1.E19" content-type="numbered"><label>19</label><mml:math id="M131" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>d</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mo>[</mml:mo><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:mo>]</mml:mo><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>f</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="italic">τ</mml:mi></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M132" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> represents the relaxation time of the variance in the environment. In practice we can either implement this variance equation term by term or call the thermal transport equation for <inline-formula><mml:math id="M133" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> as described before. However, the two methods lead to very different implementation of the variance model, each of which having its own interest. In the first method we explicitly calculate the different terms of the Eq. (<xref ref-type="disp-formula" rid="Ch1.E19"/>) which allows us to compare the relative importance of this terms, especially the one associated to the difference in humidity mean and variance. The second way is simpler to implement and can be transposed to other transport processes (diffusive transport or large-scale advection for example). In this case it is no longer necessary to extract all the physical quantities from the thermal model, only the tendencies of <inline-formula><mml:math id="M135" display="inline"><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> and <inline-formula><mml:math id="M136" display="inline"><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> are necessary.</p>
      <p id="d2e3517">As highlighted by K05, an important question underlying this theoretical approach is the determination of humidity variance in updrafts: <inline-formula><mml:math id="M137" display="inline"><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula>. In the diagnostic parameterization, it was prescribed using the humidity difference with the environment. However, the transport of <inline-formula><mml:math id="M138" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> within the thermal model now gives us direct access to <inline-formula><mml:math id="M140" display="inline"><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> <inline-formula><mml:math id="M141" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:msup><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d2e3615">With the same algebra as above, starting from the Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>) applied to <inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, we obtain the following expression for the vertical evolution of the variance in the thermal.

            <disp-formula id="Ch1.E20" content-type="numbered"><label>20</label><mml:math id="M145" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mfenced open="[" close="]"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced></mml:mrow></mml:math></disp-formula>

          when considering <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> as a conserved quantity. This expression can be completed by a relaxation term representing small-scale diffusion processes in the thermal. The advective-diffusive coupling leads to the introduction of a characteristic diffusion height <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M148" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the thermal plume where <inline-formula><mml:math id="M150" display="inline"><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> is the vertical advection and <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the diffusion timescale in the plume.

            <disp-formula id="Ch1.E21" content-type="numbered"><label>21</label><mml:math id="M152" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mfenced close="]" open="["><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e3929">In practice, <inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> can be computed applying the thermal plume model to <inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> instead of <inline-formula><mml:math id="M155" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula>, adding the relaxation term in the computation, which requires to provide the value of <inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> obtained in the transport computation of <inline-formula><mml:math id="M157" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> by the thermal plume model.</p>
</sec>
<sec id="Ch1.S3.SS5">
  <label>3.5</label><title>The relaxation time in the variance model</title>
      <p id="d2e3992">The Newton relaxation time <inline-formula><mml:math id="M158" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> which appears in the dissipation term is an important parameter of the variance calculation. It can be estimated as the relaxation time of the turbulent energy as was proposed in <xref ref-type="bibr" rid="bib1.bibx36" id="text.52"/> and <xref ref-type="bibr" rid="bib1.bibx35" id="text.53"/>. <xref ref-type="bibr" rid="bib1.bibx50" id="text.54"/> proposes to add to this small-scale relaxation a second dissipation process associated with slower large-scale two-dimensional (2D) dissipation due to horizontal wind shear instability. This second component would be present even in case of strong temperature stratification. Although it will be a part of our reflection when extending our work to the upper atmosphere, we neglect it here, as we only focus on shallow convective cases where the first component is expected to be dominant. The order of magnitude of the turbulence relaxation time is:

            <disp-formula id="Ch1.E22" content-type="numbered"><label>22</label><mml:math id="M159" display="block"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>l</mml:mi><mml:msqrt><mml:mtext>TKE</mml:mtext></mml:msqrt></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>

          <inline-formula><mml:math id="M160" display="inline"><mml:mi>l</mml:mi></mml:math></inline-formula> being a mixing length of roughly 100 m <xref ref-type="bibr" rid="bib1.bibx1" id="paren.55"/>. We obtain an order of magnitude of 100 to 1000 s for <inline-formula><mml:math id="M161" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> which is a fairly fast relaxation, especially compared to the 10 d estimated 2D relaxation <xref ref-type="bibr" rid="bib1.bibx50" id="paren.56"/>. The prognostic model depends on a unique tunable parameter. We tested two options which led to small differences in the results either considering <inline-formula><mml:math id="M162" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> or <inline-formula><mml:math id="M163" display="inline"><mml:mi>l</mml:mi></mml:math></inline-formula> as the tunable parameter in Eq. (<xref ref-type="disp-formula" rid="Ch1.E22"/>). In the second case, it was necessary, as in <xref ref-type="bibr" rid="bib1.bibx15" id="text.57"/>, to define an upper limit to the relaxation time as our TKE is likely to cancel out even below 3000 m. This prevents the relaxation terms from becoming too small and leading the variance to accumulate too strongly.</p>
</sec>
<sec id="Ch1.S3.SS6">
  <label>3.6</label><title>Injecting the total specific humidity variance into the cloud scheme</title>
      <p id="d2e4077">To replace the previous diagnostic model with a prognostic model based on humidity variance transport equations, it is first necessary to connect the humidity variance to the variance of the saturation deficit which drives the statistical cloud scheme. This well-known relationship <xref ref-type="bibr" rid="bib1.bibx50" id="paren.58"/> can be written as:

            <disp-formula id="Ch1.E23" content-type="numbered"><label>23</label><mml:math id="M164" display="block"><mml:mrow><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>(</mml:mo><mml:mi>s</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:msubsup><mml:mi>a</mml:mi><mml:mi>l</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:msubsup><mml:mi mathvariant="italic">α</mml:mi><mml:mi>l</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>T</mml:mi><mml:mi mathvariant="normal">l</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi>l</mml:mi></mml:msub><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>T</mml:mi><mml:mi>l</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mi>l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M166" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:msub><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">sat</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>T</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">l</mml:mi></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> was mentioned in Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/> and <inline-formula><mml:math id="M169" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the liquid temperature.</p>
      <p id="d2e4247">We see that a liquid temperature variance term appears in this equation as well as a cross-correlation term whose physical interpretations are described in <xref ref-type="bibr" rid="bib1.bibx51" id="text.59"/>. Several studies have analyzed the relative importance of humidity and temperature contributions to the variance <xref ref-type="bibr" rid="bib1.bibx38 bib1.bibx51" id="paren.60"/>. Although the temperature contribution is not completely negligible, it appears from these analyzes that order 1 is mostly dominated by the variability of specific humidity. In the context of this work, it seemed relevant to mainly concentrate on the specific humidity variability. Orders of magnitude of these variabilities can be estimated in LMDZ by simply diagnosing the differences in humidity and liquid temperature between the thermals and the environment.  On this basis we obtain an order of magnitude of <inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M171" display="inline"><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:math></inline-formula> and closer to <inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">α</mml:mi><mml:mi>l</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>T</mml:mi><mml:mi mathvariant="normal">l</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula>. The comparison in LES of the standard deviations of total specific humidity multiplied by <inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>l</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the saturation deficit also show an excellent first-order agreement. In this work the hypothesis is made that the variance of <inline-formula><mml:math id="M175" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula> is controlled by the variance of the total specific humidity.</p>
      <p id="d2e4347">In the new approach, the diagnosed value of <inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is finally simply replaced by <inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>l</mml:mi></mml:msub><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> by <inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mi>l</mml:mi></mml:msub><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula>.</p>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Results</title>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Tuning setup</title>
      <p id="d2e4437">A long standing issue in parameterization development and improvement was the difficulty of retuning simultaneously the free parameters after a parameterization change, without which a physics improvement could be overled by a bad parameter tuning. This retuning is now made automatic thanks to the <monospace>htexplo</monospace> tool. The same tuning was applied here to the old model version and the new one with prognostic scheme. After a number of “waves”, we identify a number of configurations for both models, for which a series of metrics computed on SCM simulations of the IHOP, ARMCU, RICO and SANDU cases <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx22" id="paren.61"/> match the metrics values computed on LES to less than a given tolerance to error <inline-formula><mml:math id="M180" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>. We use the same metrics as in Sect. 5.1 of <xref ref-type="bibr" rid="bib1.bibx22" id="text.62"/>. These metrics are based on three model variables: potential temperature, humidity and cloud fraction. They are defined as temporal and spatial integrations over time and altitudes. For cloud fraction, three specific metrics are used: the first one is linked to the maximum cloud fraction on the vertical <inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mrow><mml:mi mathvariant="normal">cld</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">max</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, the second one represents an average altitude of clouds <inline-formula><mml:math id="M182" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mrow><mml:mi mathvariant="normal">cld</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">ave</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, and the last one corresponds to the altitude of the maximum cloud fraction <inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mrow><mml:mi mathvariant="normal">cld</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">max</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, computed as an averaged altitude weighted by the fourth power of the cloud fraction. Table <xref ref-type="table" rid="T1"/> details all the different metrics used in this tuning (the three cloud metrics, and those concerning potential temperature <inline-formula><mml:math id="M184" display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula> and humidity <inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi>v</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>).</p>

<table-wrap id="T1" specific-use="star"><label>Table 1</label><caption><p id="d2e4528">Metrics for the 1D/LES tuning. Time average is given in hours from the beginning of the simulation. Potential temperature is given in K, humidity in kg kg<sup>−1</sup> and height in m.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:colspec colnum="6" colname="col6" align="center"/>
     <oasis:colspec colnum="7" colname="col7" align="center"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Case</oasis:entry>
         <oasis:entry colname="col2">IHOP</oasis:entry>
         <oasis:entry colname="col3">ARMCU</oasis:entry>
         <oasis:entry colname="col4">RICO</oasis:entry>
         <oasis:entry colname="col5">SANDU</oasis:entry>
         <oasis:entry colname="col6">SANDU</oasis:entry>
         <oasis:entry colname="col7">SANDU</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Subcase</oasis:entry>
         <oasis:entry colname="col2">REF</oasis:entry>
         <oasis:entry colname="col3">REF</oasis:entry>
         <oasis:entry colname="col4">REF</oasis:entry>
         <oasis:entry colname="col5">REF</oasis:entry>
         <oasis:entry colname="col6">SLOW</oasis:entry>
         <oasis:entry colname="col7">FAST</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">time</oasis:entry>
         <oasis:entry colname="col2">7–9</oasis:entry>
         <oasis:entry colname="col3">7–9</oasis:entry>
         <oasis:entry colname="col4">19–25</oasis:entry>
         <oasis:entry colname="col5">50–60</oasis:entry>
         <oasis:entry colname="col6">50–60</oasis:entry>
         <oasis:entry colname="col7">50–60</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mrow><mml:mn mathvariant="normal">400</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">600</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M188" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M189" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mrow><mml:mi>v</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">400</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">600</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M191" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M192" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mrow><mml:mi mathvariant="normal">cld</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">max</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M193" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M194" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mrow><mml:mi mathvariant="normal">cld</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">ave</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M196" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M197" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mrow><mml:mi mathvariant="normal">cld</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">max</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M199" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M200" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M201" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M202" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d2e4888">The free parameters are also kept the same as in <xref ref-type="bibr" rid="bib1.bibx22" id="text.63"/> except for the diagnostic model parameter of the diagnostic variance scheme BG1 and BG2 (Eqs. <xref ref-type="disp-formula" rid="Ch1.E15"/> and <xref ref-type="disp-formula" rid="Ch1.E14"/>) which are replaced by parameters <inline-formula><mml:math id="M203" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the prognostic scheme, allowed to vary between 100 and 2000 s. The other free parameters, common to both tuning exercises, are: (1) those involved in the modeling of the entrainment and detrainment rates of the thermal plume model (Eqs. <xref ref-type="disp-formula" rid="Ch1.E5"/> and <xref ref-type="disp-formula" rid="Ch1.E6"/>): A1, B1, B2, CQ and DZ and (2) the CLC and EVAP parameters are involved in the precipitation and rain re-evaporation model, CLC being associated with the critical incloud water from which precipitation is activated and EVAP being a free parameter of the precipitation flux equation which controls the fraction of precipitation that re-evaporates at a given altitude. The formalism of these parameterizations was introduced by the work of <xref ref-type="bibr" rid="bib1.bibx48" id="text.64"/>. Table <xref ref-type="table" rid="T2"/> presents a summary of the different parameters to be tuned. More details on the parameterizations and free parameters can be found in <xref ref-type="bibr" rid="bib1.bibx22" id="text.65"/>.</p>

<table-wrap id="T2" specific-use="star"><label>Table 2</label><caption><p id="d2e4933">Free parameters of the 1D/LES tuning.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Name</oasis:entry>
         <oasis:entry colname="col2">Min</oasis:entry>
         <oasis:entry colname="col3">Max</oasis:entry>
         <oasis:entry colname="col4">Ref</oasis:entry>
         <oasis:entry colname="col5">Sampling</oasis:entry>
         <oasis:entry colname="col6">controls</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">A1</oasis:entry>
         <oasis:entry colname="col2">0.5</oasis:entry>
         <oasis:entry colname="col3">1.2</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">linear</oasis:entry>
         <oasis:entry colname="col6">contribution of buoyancy to the plume acceleration</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">A2</oasis:entry>
         <oasis:entry colname="col2">1.5 <inline-formula><mml:math id="M205" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col3">4 <inline-formula><mml:math id="M207" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col4">2 <inline-formula><mml:math id="M209" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col5">linear</oasis:entry>
         <oasis:entry colname="col6">drag term in the plume acceleration</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">B1</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">1</oasis:entry>
         <oasis:entry colname="col4">0.95</oasis:entry>
         <oasis:entry colname="col5">linear</oasis:entry>
         <oasis:entry colname="col6">scaling factor for entrainment and detrainment</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CQ</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">0.02</oasis:entry>
         <oasis:entry colname="col4">0.012</oasis:entry>
         <oasis:entry colname="col5">linear</oasis:entry>
         <oasis:entry colname="col6">influence of humidity contrast on detrainment</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">DZ</oasis:entry>
         <oasis:entry colname="col2">0.05</oasis:entry>
         <oasis:entry colname="col3">0.2</oasis:entry>
         <oasis:entry colname="col4">0.07</oasis:entry>
         <oasis:entry colname="col5">linear</oasis:entry>
         <oasis:entry colname="col6">environmental air altitude shift for buoyancy computation</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">EVAP</oasis:entry>
         <oasis:entry colname="col2">5 <inline-formula><mml:math id="M211" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<sup>−5</sup></oasis:entry>
         <oasis:entry colname="col3">5 <inline-formula><mml:math id="M213" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<sup>−4</sup></oasis:entry>
         <oasis:entry colname="col4">1 <inline-formula><mml:math id="M215" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<sup>−4</sup></oasis:entry>
         <oasis:entry colname="col5">log</oasis:entry>
         <oasis:entry colname="col6">reevaporation of rainfall</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CLC</oasis:entry>
         <oasis:entry colname="col2">1 <inline-formula><mml:math id="M217" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<sup>−4</sup></oasis:entry>
         <oasis:entry colname="col3">1 <inline-formula><mml:math id="M219" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<sup>−3</sup></oasis:entry>
         <oasis:entry colname="col4">6.5 <inline-formula><mml:math id="M221" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<sup>−4</sup></oasis:entry>
         <oasis:entry colname="col5">linear</oasis:entry>
         <oasis:entry colname="col6">autoconversion of cloud liquid water to rainfall</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M223" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">100</oasis:entry>
         <oasis:entry colname="col3">2000</oasis:entry>
         <oasis:entry colname="col4">700</oasis:entry>
         <oasis:entry colname="col5">linear</oasis:entry>
         <oasis:entry colname="col6">timescale for variance dissipation in the environment</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M224" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">100</oasis:entry>
         <oasis:entry colname="col3">2000</oasis:entry>
         <oasis:entry colname="col4">700</oasis:entry>
         <oasis:entry colname="col5">linear</oasis:entry>
         <oasis:entry colname="col6">timescale for variance dissipation in the plume</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Simulation scores according to the tuning tool</title>
      <p id="d2e5365">At each tuning wave, LMDZ SCM-simulations are computed within the range of authorized parameters by the previous wave (NROY: not-ruled out yet). For each of this simulations, a score is assigned per metric, this score being defined from the difference between the target value of the metric (the average value of the LES) and the value for the given simulation, as well as from the accepted tolerance. The closer the score is to 0, the closer the simulation metric is to the target value, a score equal to 1 indicates that the difference between the simulated metric and the target value corresponds exactly to the tolerance which we are willing to accept. The simulations can thus be classified according to the obtained scores, either on an average score criterion or on a maximum criterion. Here we use the maximum criterion to classify the ten most efficient simulations in order to prevent large errors on certain metrics from being compensated by very good results on others.</p>
      <p id="d2e5368">Figure <xref ref-type="fig" rid="F1"/> compares the results obtained on all the metrics between the diagnostic and prognostic models after 20 waves of tuning. From bottom to top, the figure displays the scores of the 10 best simulations across the 11 studied metrics. The second row shows the average score for each simulation, and the top row shows the maximum score of each simulation, corresponding to the worst score obtained among all metrics. As mentioned previously, the simulations are ranked according to the order of their maximum scores. In particular we see that the ten best simulations achieve almost identical maximum scores in both cases, close to 0.75 which means that the worst metric is at a distance of 0.75 <inline-formula><mml:math id="M225" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula> from the target value. Note however that this score is obtained for a somewhat reduced tolerance to error <inline-formula><mml:math id="M226" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula> in the case of the prognostic case for the metrics relative to the cloud height, <inline-formula><mml:math id="M227" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mrow><mml:mi mathvariant="normal">cld</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">ave</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mrow><mml:mi mathvariant="normal">cld</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">max</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>. This lower values were adjusted since the new scheme was globally producing a better adjustment of the cloud height.</p>

      <fig id="F1" specific-use="star"><label>Figure 1</label><caption><p id="d2e5421">Metric scores (<inline-formula><mml:math id="M229" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>) for the ten best simulations with <bold>(a)</bold> the previous diagnostic model and <bold>(b)</bold> the prognostic model. The SCM simulations are indexed by their wave number and by their number within that wave (out of 90 simulations per wave). The maximum and average scores of these ten best simulations are shown first, followed by their explicit scores for each metric. The 11 metrics are recalled on the left side with their acceptable margins of error <inline-formula><mml:math id="M230" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/7949/2026/acp-26-7949-2026-f01.png"/>

        </fig>

      <p id="d2e5456">It is important to underline that the tuning process does not aim to select an optimized configuration of the model but rather to highlight a range of parameters leading to acceptable results within the framework we have defined and the typical performance of the model in this range. In this context this tuning showed that the acceptable range of the relaxation time is 100 to 1300 s which is consistent with the previous qualitative considerations.</p>
      <p id="d2e5459">When using the TKE to define the relaxation time, the performance of the diagnostic scheme are comparable (results not shown) and the acceptable range of the mixing lengths shows up to be between 70 and 160 m.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Representation of the moments of the humidity distribution and cloud fraction</title>
      <p id="d2e5470">In this section, we focus on the variance, skewness, and cloud fraction profiles, which constitute the main diagnostics examined in this study. Most other physical quantities are only weakly affected by the change in the variance parameterization, as shown in Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>. The results for the almost cloud-free IHOP case – used to control the potential temperature profile, which remains largely unchanged by the new parameterization – are not discussed here. Figure <xref ref-type="fig" rid="F2"/> presents the time evolution of the vertical cloud fraction profile simulated by the LES (left column) for the ARMCU, RICO, and SANDU cases, together with the differences between the LMDZ SCM and the LES for the diagnostic (middle) and prognostic models (right). Overall, the cloud fraction simulated by the two models remains very similar, with the prognostic formulation leading to a slight reduction in biases. Even if biased, the representation of the cloud fraction has been much improved in comparison with general model performances in simulating the ARM cumulus case 20 years ago <xref ref-type="bibr" rid="bib1.bibx28" id="paren.66"/>, in particular regarding the cloud base and cloud top. Also, the RICO and SANDU cases involve precipitation processes and radiation, to which the cloud fraction simulated by LES is also quite sensitive <xref ref-type="bibr" rid="bib1.bibx52 bib1.bibx42" id="paren.67"/>.</p>

      <fig id="F2" specific-use="star"><label>Figure 2</label><caption><p id="d2e5485">Total cloud fraction (%) in the ARMCU/REF (top), RICO/REF (middle) and SANDU/REF (bottom) cases. On the left the LES simulation. In the middle the difference in cloud fraction between the best tuning simulation with the old diagnostic model and the LES, black contours indicating the cloud fraction in the SCM simulation. On the right the difference in cloud fraction between the best tuning simulation with the prognostic model and the LES, black contours indicating the cloud fraction in the SCM simulation.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/7949/2026/acp-26-7949-2026-f02.png"/>

        </fig>

      <p id="d2e5494">Figure <xref ref-type="fig" rid="F3"/> separates the total standard deviation into the standard deviation within thermals and within their environment, along with the corresponding difference in total specific humidity. Figure <xref ref-type="fig" rid="F4"/> shows the vertical profile of cloud fraction and the associated standard deviation of specific humidity for specific times of simulations, as well as the time evolution of the standard deviation averaged within the cloud layer. Figure <xref ref-type="fig" rid="F5"/> evaluates the representation of the third order moment and skewness.</p>

      <fig id="F3" specific-use="star"><label>Figure 3</label><caption><p id="d2e5506">Difference in total specific humidity between thermals and the environment (left), standard deviation of the saturation deficit in the thermals (middle) and in the environment (right). Top ARMCU/REF at 19:00 LT, bottom RICO/REF at 20:00 LT. Blue: SCM with prognostic variance, dashed red: SCM with diagnostic variance, thick gray: LES.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/7949/2026/acp-26-7949-2026-f03.png"/>

        </fig>

      <fig id="F4" specific-use="star"><label>Figure 4</label><caption><p id="d2e5517">Cloud fraction and standard deviation of the saturation deficit, including the contribution of thermals, in the ARMCU/REF (top), RICO/REF (middle) and SANDU/REF (bottom) cases. Thick gray is the LES, blue is the LMDZ simulation with prognostic variance and dashed red with previous diagnostic model. On the left the cloud fraction profile at 19:00 LT for ARMCU, 20:00 LT for RICO and midnight on the last day for SANDU. In the middle the standard deviation of the saturation deficit profile at the same dates. On the right temporal evolutions of the averaged standard deviation between 500  and 2500 m for ARMCU and RICO and 400 and 2200 m for SANDU. These data were obtained with the best tuning simulations for each model.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/7949/2026/acp-26-7949-2026-f04.png"/>

        </fig>

      <fig id="F5" specific-use="star"><label>Figure 5</label><caption><p id="d2e5528">Centered third order moment (numerator of Eq. <xref ref-type="disp-formula" rid="Ch1.E11"/>) of the saturation deficit distribution on the left, skewness of the saturation deficit distribution profile on the middle and its evolution in time averaged from 500 and 2500 m for ARMCU and RICO, and from 400 and 2200 m for SANDU on the right. Top ARMCU/REF, middle RICO/REF and bottom SANDU/REF. Left and middle profiles are represented at 19:00 LT for ARMCU, 20:00 LT for RICO and midnight on the last day for SANDU. Blue: SCM with prognostic variance, dashed red: SCM with diagnostic variance, thick gray: LES.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/7949/2026/acp-26-7949-2026-f05.png"/>

        </fig>

      <p id="d2e5539">While the cloud fraction and the standard deviation of total specific humidity are quite close between the two model versions and the LES (Fig. <xref ref-type="fig" rid="F4"/>), the prognostic model improves the representation of the standard deviation within thermals (Fig. <xref ref-type="fig" rid="F3"/>). It can be seen that in the diagnostic model, the standard deviation is almost proportional to the specific humidity difference between the thermals and the environment and one order of magnitude too large. This strongly impacts the third-order moment (Fig. <xref ref-type="fig" rid="F5"/>) through the first term of Eq. (<xref ref-type="disp-formula" rid="Ch1.E11"/>). This major flaw is largely corrected by the prognostic model, although the standard deviation is there slightly underestimated. The third-order moment, which reflects the asymmetry of the humidity distribution, is now in better agreement with the LES. This demonstrates that an improved representation of the higher moments of the distribution profiles can be obtained by simply exploiting the transport of <inline-formula><mml:math id="M231" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> within the thermals, with a tunable parameter that is easy to estimate using TKE. A possible flaw of the prognostic model is the lack of representation in the PDF of organized subsiding structures which tend to locally dry out the environment. Although subsidences are taken into account as sources of variance, they cannot negatively impact the third order moment because of the binary structure of our PDF with only thermal plume and environment. This is particularly visible in rare areas of negative skewness but it should not overshadow the quite accurate estimation of the third-order moments of the model.</p>
      <p id="d2e5569">Figure <xref ref-type="fig" rid="F6"/> further shows the contribution of the different terms of Eq. (<xref ref-type="disp-formula" rid="Ch1.E18"/>) in the variance transport. It shows the clear predominance of the first term of the variance transport equation, a term which represents the squared difference in humidity between thermals and environment. The two other terms, difference of variance and subsidence, appear to be an order of magnitude smaller so that they could be neglected if one wants to simplify the implementation of the explicit transport equation in the model. This result is specific to shallow convective cases, where the standard deviations of humidity, both in thermals and in the environment, are small compared to the mean values and their difference (see Fig. <xref ref-type="fig" rid="F3"/>). In contrast, in a deep convective case, such as that studied in K05, the ratio <inline-formula><mml:math id="M233" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M234" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M235" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi mathvariant="italic">σ</mml:mi><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">t</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula> is much higher, and one can therefore expect a significant impact from the variance difference term. K05 indeed shows that, in this case, the variance difference term is of the same order of magnitude as the squared humidity difference term. This point should not be overlooked when extending this study to deep convection cases. In that context, however, particular attention will also need to be paid to precipitating downdrafts, which can have a significant, and often negative, impact on the variance and skewness.</p>

      <fig id="F6" specific-use="star"><label>Figure 6</label><caption><p id="d2e5611">Various profiles in the ARMCU/REF (top) RICO/REF (middle) and SANDU/REF (bottom) cases. On the left: comparison between the 3 source terms of variance in Eq. (<xref ref-type="disp-formula" rid="Ch1.E18"/>), blue being <inline-formula><mml:math id="M236" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>d</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> the squared mean difference term, dashed red the variance difference term <inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>d</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>q</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and thick gray the subsidence term <inline-formula><mml:math id="M238" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi>f</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>∂</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>. In the middle the normalized profiles of some physical quantities involved in the variance model: the detrainment rate <inline-formula><mml:math id="M239" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula> (thick dashed blue), the thermal fraction multiplicative term in the diagnostic model <inline-formula><mml:math id="M240" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msup><mml:mi mathvariant="italic">α</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:msup></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula> (dashed red) and the square of the total humidity difference between thermal and environment <inline-formula><mml:math id="M241" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>q</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> (black). The quotient of the detrainement term by the termal fraction term is also represented (thick gray). On the right the total humidity variance profiles are remained: blue for the prognostic variance model, dashed red for the diagnostic one and thick gray for the LES. This profiles were computed at 19:00 LT for ARMCU, 20:00 LT for RICO and midnight on the last day for SANDU.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/7949/2026/acp-26-7949-2026-f06.png"/>

        </fig>

      <p id="d2e5798">Accurately representing the vertical profile of cloud fraction during the stratocumulus-to-cumulus transition remains particularly challenging (SANDU case). <xref ref-type="bibr" rid="bib1.bibx21" id="text.68"/> showed that a carefully tuned modification of the detrainment parameterization represents an important first step toward simulating this transition. However, Fig. <xref ref-type="fig" rid="F2"/> shows that the cloud fraction still tends to remain saturated with the diagnostic model while it gradually fades in the LES. Moreover this cloud fraction is too thick at night in LMDZ especially from the second day of the simulation where it becomes significantly finer in the LES, leading to sometimes large differences in Fig. <xref ref-type="fig" rid="F2"/>. Figures <xref ref-type="fig" rid="F2"/> and <xref ref-type="fig" rid="F4"/> show that both aspects are attenuated with the variance prognostic model, even though some notable differences still persist. Looking deeper at the variance profile, we can attribute this improvement to a better representation of the variance peak at the top of the clouds. Let's remind, indeed, that an increase in the variance of the statistical cloud scheme, in case of high cloud fraction, is likely to reduce the cloud fraction by increasing the fraction of air with lower humidity. This better representation of the variance peak can partly be attributed to the thermal plume detrainment peak in this area as we can see in Fig. <xref ref-type="fig" rid="F6"/> (in the middle bottom) even if this peak occurs a little too high. In fact, the detrainment is directly involved in the variance transport equation but was not taken into account in the diagnostic model which rather involves a term dependent on the thermal fraction (dashed red curve in the middle of Fig. <xref ref-type="fig" rid="F6"/>). This term vanishes to zero while the detrainment reaches its peak which explains the difference in behavior between the two models. We can notice, however, that the difference in humidity between thermals and environment also plays a crucial role at these altitudes (in black in Fig. <xref ref-type="fig" rid="F6"/> in the middle) but in the diagnostic model this term is multiplied by a factor which tends quickly to zero while in the prognostic model the multiplicative factor, which depends on the detrainment, cancels out higher and can even reach a local maximum at the top of the clouds.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusions</title>
      <p id="d2e5828">This study first confirms that the choice of a weighted bivariate Gaussian PDF, based on the fraction of thermals, provides a satisfactory framework for representing the asymmetric distribution of humidity at different atmospheric levels especially when associated with the prognostic variance model, which helps avoid inconsistent behaviors of the saturation deficit in the thermals and at the cloud tops through the thermal detrainment term.</p>
      <p id="d2e5831">It shows how the heuristic parameterization of the width of the two Gaussian proposed by <xref ref-type="bibr" rid="bib1.bibx23" id="text.69"/> can be replaced by a prognostic model of the variance of the total specific humidity whose physical content is based on a general transport equations.</p>
      <p id="d2e5837">In the context of shallow convection considered here, we make use of the thermal plume model in which the specific humidity is treated as a conservative variable. This property is used to transport its square and to derive the equation of evolution of the variance by assimilating the diffusive homogenization to a simple Newtonian relaxation of the humidity variance toward zero, both in the plume and in its environment, involving a time parameter which can be estimated from the TKE.</p>
      <p id="d2e5840">The new approach, coupling the thermal plume model, and a bi-Gaussian cloud scheme with width computed from the prognostic equation of <inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:msup><mml:mi>q</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, was implemented in the LMDZ model and tested in SCM mode against LES results on cumulus and transition test cases.</p>
      <p id="d2e5855">Thanks to an automatic tuning of the model free parameters, we were able to obtain results consistent with those obtained previously with the diagnostic model of the Gaussian widths.</p>
      <p id="d2e5858">The new approach significantly improves the representation of the higher moments of the specific humidity distribution without degrading, or even improving slightly the representation of cloud fractions.</p>
      <p id="d2e5861">These improvements are closely related to the consideration of detrainment, which plays a key role in the prognostic equations of the variance. Certain inaccuracies of the diagnostic model could therefore be corrected, in particular in the thermal plumes and at the top of the clouds where detrainment is significant.</p>
      <p id="d2e5864">Note however that the present study is restricted to cases of shallow convection and that the variance model only accounts so far for source terms coming from thermal plumes and sink coming from small scale turbulence.</p>
      <p id="d2e5867">Negative asymmetries due to downdrafts cannot be accounted so far within the framework with the bi-Gaussian scheme.</p>
      <p id="d2e5870">Furthermore, subsiding shells, whose convective transport contribution can reach from 5 % to 10 % <xref ref-type="bibr" rid="bib1.bibx14 bib1.bibx43 bib1.bibx4" id="paren.70"/>, are not explicitly represented in our mass-flux model. However, as previously said, the detrainment parameterization includes certain aspects that indirectly account for their influence. The parameterization of sub-cloud layer downdrafts, also referred to as dry tongues <xref ref-type="bibr" rid="bib1.bibx8" id="paren.71"/>, is currently under development and could further contribute to the variance budget.</p>
      <p id="d2e5880">This study focuses on liquid boundary-layer clouds. In the presence of ice, beyond thermodynamic effects associated with latent heat release (which enhances thermal updrafts), additional microphysical processes (e.g., condensation nuclei, supersaturation) should be considered and are indeed an active area of research within LMDZ.</p>
      <p id="d2e5883">As a natural extension of this study, we are working on integrating the formalism of the Emanuel's scheme for deep convection into the variance model and further source terms associated with convective transport and evaporation of precipitation, with a particular focus on representing the impact of precipitating downdrafts from the Emanuel scheme on specific humidity variance. In contrast to shallow convection, these downdrafts are expected to have a significant effect on variance. Two competing processes may be involved: a drying effect associated with the descent of dry air, and a moistening effect linked to rain re-evaporation.</p>
      <p id="d2e5886">The final objective would be to transport the large-scale variance as a state variable in the dynamics of the GCM with the same approach proposed in the present study. This work is therefore an important step to incorporate into a GCM a unified global model of the upper moments of the atmospheric specific humidity relying on the fundamental physical equations and with a minimum of free parameters. It has helped to improve our understanding of the role of thermal updrafts in the variability of specific humidity, particularly through the detrainment process.</p>
</sec>

      
      </body>
    <back><app-group>

<app id="App1.Ch1.S1">
  <label>Appendix A</label><title>Calculation of second- and third-order moments of saturation deficit</title>
<sec id="App1.Ch1.S1.SS1">
  <label>A1</label><title>Second order moment of saturation deficit</title>
      <p id="d2e5907">The second order moment of saturation deficit writes by simply separating the spatial average into a thermal part and an environmental part:

            <disp-formula id="App1.Ch1.S1.E24" content-type="numbered"><label>A1</label><mml:math id="M243" display="block"><mml:mrow><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>s</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mi>s</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mfenced><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e5999">Let us calculate the two terms separately:

            <disp-formula id="App1.Ch1.S1.E25" content-type="numbered"><label>A2</label><mml:math id="M244" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mover accent="true"><mml:mrow><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d2e6194">The last term is zero, the first one is the variance <inline-formula><mml:math id="M245" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> of the saturation deficit in the thermal part, and the middle one can be rearranged as follow noting that <inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula>:

            <disp-formula id="App1.Ch1.S1.E26" content-type="numbered"><label>A3</label><mml:math id="M247" display="block"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e6319">Finally it leads to:

            <disp-formula id="App1.Ch1.S1.E27" content-type="numbered"><label>A4</label><mml:math id="M248" display="block"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e6389">In the same way we calculate:

            <disp-formula id="App1.Ch1.S1.E28" content-type="numbered"><label>A5</label><mml:math id="M249" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mover accent="true"><mml:mrow><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          which becomes:

            <disp-formula id="App1.Ch1.S1.E29" content-type="numbered"><label>A6</label><mml:math id="M250" display="block"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="italic">α</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e6654">By introducing Eqs. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E27"/>) and (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E29"/>) into Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E24"/>), we obtain as announced:

            <disp-formula id="App1.Ch1.S1.E30" content-type="numbered"><label>A7</label><mml:math id="M251" display="block"><mml:mrow><mml:mi>V</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>s</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></disp-formula></p>
</sec>
<sec id="App1.Ch1.S1.SS2">
  <label>A2</label><title>Third order moment of saturation deficit</title>
      <p id="d2e6772">In the same way, we derive the expression for the third-order moment:

            <disp-formula id="App1.Ch1.S1.E31" content-type="numbered"><label>A8</label><mml:math id="M252" display="block"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mi>s</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mi>s</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e6864">Which splits into

            <disp-formula id="App1.Ch1.S1.E32" content-type="numbered"><label>A9</label><mml:math id="M253" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          by noting that <inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:mover accent="true"><mml:mrow><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M255" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0. In our framework, the distribution of the saturation deficit is Gaussian in the thermal part. Therefore, the first term of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E32"/>), which represents the third-order moment in the thermal part, is zero. Thus, using Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E26"/>), it remains:

            <disp-formula id="App1.Ch1.S1.E33" content-type="numbered"><label>A10</label><mml:math id="M256" display="block"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:math></disp-formula></p>
      <p id="d2e7231">By applying the same reasoning in the environmental part:

            <disp-formula id="App1.Ch1.S1.E34" content-type="numbered"><label>A11</label><mml:math id="M257" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mover accent="true"><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          which leads to:

            <disp-formula id="App1.Ch1.S1.E35" content-type="numbered"><label>A12</label><mml:math id="M258" display="block"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mrow><mml:mo>′</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msup><mml:mi mathvariant="italic">α</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mi mathvariant="italic">α</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced></mml:mrow></mml:math></disp-formula>

          And after some simple algebra we obtain the third-order moment by injecting Eqs. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E33"/>) and (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E35"/>) into Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E31"/>):

            <disp-formula id="App1.Ch1.S1.E36" content-type="numbered"><label>A13</label><mml:math id="M259" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">α</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mfenced close=")" open="("><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">th</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="normal">env</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>+</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">α</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi mathvariant="italic">α</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfenced><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">th</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mi mathvariant="normal">env</mml:mi></mml:msub></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d2e7658">The skewness is then obtained by dividing by <inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:msup><mml:mi>V</mml:mi><mml:mfrac><mml:mn mathvariant="normal">3</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:msup></mml:mrow></mml:math></inline-formula> as in the main text (Eq. <xref ref-type="disp-formula" rid="Ch1.E11"/>).</p>
</sec>
</app>
  </app-group><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d2e7682">The LMDZ GCM is available at: <uri>http://svn.lmd.jussieu.fr/LMDZ/LMDZ6/trunk</uri> (last access: 27 May 2026). It can be installed automatically on a laptop with the command <uri>http://lmdz.lmd.jussieu.fr/pub/install_lmdz.sh</uri> (last access: 27 May 2026). The htexplo tool for tuning is available at: <uri>https://svn.lmd.jussieu.fr/HighTune/trunk</uri> (last access: 27 May 2026). The data and scripts used to produce the figures in this manuscript are available through the following <ext-link xlink:href="https://doi.org/10.5281/zenodo.19725264" ext-link-type="DOI">10.5281/zenodo.19725264</ext-link> <xref ref-type="bibr" rid="bib1.bibx10" id="paren.72"/>. The released materials include scripts to download and install the appropriate versions of the LMDZ and htexplo software, as well as all necessary inputs to reproduce the results.</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d2e7703">L.A.: work design, diagnostics, analysis, figures and writing. F.H.: work design, diagnostics, analysis and writing. C.R.: analysis and writing.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d2e7709">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d2e7715">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. The authors bear the ultimate responsibility for providing appropriate place names. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.</p>
  </notes><ack><title>Acknowledgements</title><p id="d2e7721">The authors thank Jean-Yves Grandpeix for helpful discussions. The work benefited from the development of the htexplo tool and from the automation of LES/SCM simulations through the standardization of I/O formats performed within the research group DEPHY of the CLIMERI infrastructure.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d2e7726">This research has been supported by the French Ministère de la Transition Écologique et Solidaire under the Climaviation project (grant no. DGAC N2021-39), with support from France's Plan National de Relance et de Résilience (PNRR) and the European Union's NextGenerationEU.</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d2e7733">This paper was edited by Thijs Heus and reviewed by two anonymous referees.</p>
  </notes><ref-list>
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