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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-26-15853-2026</article-id><title-group><article-title>Drivers of biogenic secondary organic aerosol  from the past to the future</article-title><alt-title>Drivers of biogenic secondary organic aerosol from the past to the future</alt-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2">
          <name><surname>Shi</surname><given-names>Yang</given-names></name>
          <email>yang.shi@pnnl.gov</email>
        <ext-link>https://orcid.org/0000-0002-6111-5085</ext-link></contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff3">
          <name><surname>Heald</surname><given-names>Colette L.</given-names></name>
          <email>colette.heald@env.ethz.ch</email>
        <ext-link>https://orcid.org/0000-0003-2894-5738</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Kroll</surname><given-names>Jesse H.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6275-521X</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Civil and Environmental Engineering Department, Massachusetts Institute of Technology, Cambridge, MA 02139, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Atmospheric, Climate, and Earth Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Institute for Atmospheric and Climate Science, ETH Zurich, Zurich, 8092, Switzerland</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Yang Shi (yang.shi@pnnl.gov) and Colette L. Heald (colette.heald@env.ethz.ch)</corresp></author-notes><pub-date><day>11</day><month>November</month><year>2026</year></pub-date>
      
      <volume>26</volume>
      <issue>21</issue>
      <fpage>15853</fpage><lpage>15875</lpage>
      <history>
        <date date-type="received"><day>20</day><month>March</month><year>2026</year></date>
           <date date-type="rev-request"><day>26</day><month>March</month><year>2026</year></date>
           <date date-type="rev-recd"><day>15</day><month>August</month><year>2026</year></date>
           <date date-type="accepted"><day>28</day><month>September</month><year>2026</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2026 Yang Shi et al.</copyright-statement>
        <copyright-year>2026</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026.html">This article is available from https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d2e120">Biogenic secondary organic aerosol (SOA) makes up a substantial fraction of atmospheric fine particulate mass, with implications for climate and human health. However, its chemical formation processes remain poorly understood and are often oversimplified in 3D models. Recent studies have found that the peroxy radical (RO<sub>2</sub>) isomerization and the RO<sub>2</sub> accretion reactions (RO<sub>2</sub> <inline-formula><mml:math id="M4" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub>) can lead to SOA formation. We expand the RO<sub>2</sub> chemical mechanism in the Community Earth System Model version 2 to include these two additional pathways for biogenic SOA formed through the OH oxidation of volatile organic compounds (VOCs). Using this mechanism, we quantify the contribution of each RO<sub>2</sub> pathway to biogenic SOA formation and examine how these contributions evolve from the pre-industrial (PI) to present-day (PD) and future (F). We find that in PD conditions, RO<sub>2</sub> isomerization accounts for nearly half of monoterpene SOA, while the contribution from RO<sub>2</sub> <inline-formula><mml:math id="M10" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> pathways is minor. From PI to F, the RO<sub>2</sub> fate varies in response to atmospheric NO<sub><italic>x</italic></sub> levels and climate, but the contribution from RO<sub>2</sub> isomerization is consistently high for monoterpenes, underscoring the importance of representing this pathway in SOA parameterizations. Total biogenic SOA formed through OH oxidation decreases by 41 % from PI to PD and increases by 112 % from PD to F. This evolution from PI to F is largely driven by changes in biogenic VOC emissions, rather than shifts in chemistry or thermodynamic partitioning. Our results highlight the need to better constrain RO<sub>2</sub> pathways for SOA formation through laboratory studies and represent this RO<sub>2</sub> chemistry in SOA modeling.</p>
  </abstract>
    
<funding-group>
<award-group id="gs1">
<funding-source>U.S. Department of Energy</funding-source>
<award-id>DE-SC0022017</award-id>
</award-group>
<award-group id="gs2">
<funding-source>Pacific Northwest National Laboratory</funding-source>
<award-id>86140</award-id>
</award-group>
</funding-group>
</article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d2e274">Aerosols impact the Earth's climate by directly scattering and absorbing radiation as well as indirectly altering cloud properties (Forster et al., 2021). They also contribute to air pollution and the associated harm to human health (Burnett et al., 2018). Organic aerosol (OA) makes up a substantial fraction (20 %–90 %) of submicron particulate mass in the troposphere, with formation of secondary organic aerosol (SOA) generally outweighing primary OA (Jimenez et al., 2009; Zhang et al., 2007). Biogenic sources are estimated to be a major contributor to global SOA formation (Hallquist et al., 2009; Hodzic et al., 2016; Kanakidou et al., 2005; Tilmes et al., 2019). Despite this, there remain large uncertainties in our understanding of biogenic SOA, largely due to the complex chemical processes involved in the formation of SOA.</p>
      <p id="d2e277">SOA is formed through the oxidation of volatile organic compounds (VOCs) followed by gas-to-particle conversion of the products. VOC oxidation generates organic peroxy radicals (RO<sub>2</sub>), the chemical fate of which is a determining factor in SOA formation. Historically, chamber studies explored SOA formation when RO<sub>2</sub> reacts with NO under high-NO<sub><italic>x</italic></sub> (polluted) conditions and with HO<sub>2</sub> under low-NO<sub><italic>x</italic></sub> (clean) conditions (Kroll et al., 2005, 2006; Ng et al., 2007; Song et al., 2005). For small biogenic VOC (BVOC) molecules (e.g., isoprene and monoterpenes), the SOA yields (i.e., the mass of SOA formed per mass of VOC reacted) are generally larger for the RO<sub>2</sub> <inline-formula><mml:math id="M23" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> pathway than the RO<sub>2</sub> <inline-formula><mml:math id="M26" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO pathway, because the products formed from the former reaction are less volatile (Kroll et al., 2006; Presto et al., 2005). But this NO<sub><italic>x</italic></sub> dependence is reversed in the oxidation of large VOC molecules (e.g., sesquiterpenes) (Ng et al., 2007).</p>
      <p id="d2e376">Recent studies have elucidated additional RO<sub>2</sub> reaction pathways for SOA formation. Chamber experiments on <inline-formula><mml:math id="M29" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene oxidation have shown that RO<sub>2</sub> unimolecular isomerization, also known as autooxidation, generates large amounts of extremely low-volatility products that can easily condense to form SOA (Ehn et al., 2014). The reaction rates of isomerization highly depend on the chemical structures of RO<sub>2</sub> (Bianchi et al., 2019; Vereecken and Nozière, 2020; Otkjær et al., 2018; Borcher et al., 2026). For some RO<sub>2</sub> species, the isomerization is sufficiently fast and can outcompete bimolecular reactions (Xu et al., 2019; Xu et al., 2022). Also, isomerization rates exhibit a large positive temperature dependence, enhancing the relative importance of this pathway at higher temperatures (Bianchi et al., 2019). In addition, chamber experiments with <inline-formula><mml:math id="M33" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene and aromatic compounds have revealed that RO<sub>2</sub> self- and cross- reactions (i.e., RO<sub>2</sub> <inline-formula><mml:math id="M36" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions) can rapidly form accretion (dimer) products, which feature remarkably low volatility and are thus effective sources for SOA (Berndt et al., 2018a, b; Zhao et al., 2018). The reaction rates of the RO<sub>2</sub> <inline-formula><mml:math id="M39" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions are highly uncertain, with measured rates varying by up to 2 orders of magnitude in these chamber studies.</p>
      <p id="d2e490">VOC oxidation and the subsequent RO<sub>2</sub> chemistry are often simplified in SOA parameterizations in regional and global models. In earlier models lacking comprehensive chemical mechanisms, emissions of SOA or gas-phase condensable organic products were scaled directly from VOC emissions with fixed mass yields (Chin et al., 2002; Colarco et al., 2010; Liu et al., 2012). A more advanced approach is to oxidize VOC into two or more condensable product bins (Bergman et al., 2022; Chung and Seinfeld, 2002; Hoyle et al., 2007; Lou et al., 2020; Tilmes et al., 2019; Tsimpidi et al., 2014). However, this method does not account for the NO<sub><italic>x</italic></sub> dependence of the RO<sub>2</sub> fate, and some models use only the low-NO<sub><italic>x</italic></sub> conditions for biogenic SOA, assuming that most biogenic emissions are oxidized in relatively clean environments (e.g., Lou et al., 2020; Tilmes et al., 2019; Tsimpidi et al., 2014). The first explicit treatment of NO<sub><italic>x</italic></sub>-dependent RO<sub>2</sub> chemistry was introduced by Henze et al. (2008), who parameterized aromatic SOA yields from both the low-NO<sub><italic>x</italic></sub> and high-NO<sub><italic>x</italic></sub> pathways as products of the RO<sub>2</sub> <inline-formula><mml:math id="M50" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> and RO<sub>2</sub> <inline-formula><mml:math id="M53" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO reactions, respectively. Some large-scale models have adopted this approach for both anthropogenic and biogenic SOA (Hodzic et al., 2016; Jo et al., 2021; Pye et al., 2010). More recently, a few attempts have been made to include the isomerization and RO<sub>2</sub> <inline-formula><mml:math id="M55" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reaction pathways with more comprehensive RO<sub>2</sub> chemistry in large scale models (Mayhew et al., 2025; Xu et al., 2022; Zhao et al., 2020, 2024). Xu et al. (2022) represent the two pathways for RO­<sub>2</sub> generated from isoprene and monoterpene OH reactions and ozonolysis in a chemical transport model. However, they do not couple the gas-phase chemistry with aerosol formation and use the formed low-volatility gas-phase products as an analogue for SOA. Mayhew et al. (2025) examined the accretion reactions for all the RO<sub>2</sub> generated in the same chemical transport model, but the isomerization of terpene RO<sub>2</sub> is precluded. Zhao et al. (2020) developed an RO<sub>2</sub>-pathway (including autooxidation and dimerization) SOA formation scheme for monoterpenes, which they implement in a regional model over the Amazon. This scheme was subsequently implemented in a global climate model to better simulate organic-mediated nucleation (Zhao et al., 2024). To our knowledge, the impact of these two newly identified RO<sub>2</sub> fates on total biogenic SOA formation has not yet been explored in a global model.</p>
      <p id="d2e689">The RO<sub>2</sub> fate and biogenic SOA formation under different climate conditions are controlled by complex interactions between natural biogenic VOC emissions, anthropogenic emissions, and climate factors (e.g., temperature, CO<sub>2</sub> concentrations). For example, global biogenic VOC emissions are influenced by anthropogenic land use change (Heald and Geddes, 2016; Shi et al., 2025; Unger, 2014), temperatures (Guenther et al., 2012), and CO<sub>2</sub> level (Arneth et al., 2007; Heald et al., 2009). Changes in anthropogenic NO emissions may perturb the RO<sub>2</sub> <inline-formula><mml:math id="M67" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO pathway and thus shift the RO<sub>2</sub> fate and SOA formation (Jo et al., 2021). Also, global warming from the past to the future may lead to opposing effects – increasing SOA formation through accelerating RO<sub>2</sub> isomerization while reducing SOA by pushing gas-particle partitioning toward the gas-phase. The role of these factors on biogenic SOA formation remains poorly constrained, partly due to a lack of representation of comprehensive RO<sub>2</sub> chemistry in the SOA parameterizations in global climate models. As a result, the SOA loadings under different climate conditions are not well assessed, which imposes large uncertainties in the aerosol-induced climate radiative forcing and potential climate feedback involving biogenic SOA.</p>
      <p id="d2e763">In this study, we incorporate the latest understanding of RO<sub>2</sub> chemistry for biogenic SOA initially formed from gas-phase OH-initiated oxidation in a global climate model. We focus on the fate of the initial RO<sub>2</sub> formed upon VOC oxidation. We note that SOA can also form through VOC reaction with other oxidants (e.g., O<sub>3</sub> and NO<sub>3</sub>) and through multiphase chemistry. Although these pathways also involve RO<sub>2</sub> chemistry, their specific RO<sub>2</sub> fates are not the primary focus of this study and thus they are excluded from our analysis. Our work aims to answer three questions: (1) How does our recent understanding of RO<sub>2</sub> fate alter the global simulated burden of OH-initiated biogenic SOA?; (2) What fraction of RO<sub>2</sub> undergoes each reaction pathway (i.e., RO<sub>2</sub> fate) and how much SOA is formed through each pathway?; and (3) How does the burden of SOA and RO<sub>2</sub> fate change from the past to the present and to the future?</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Methods</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>CESM2.2</title>
      <p id="d2e872">Our study uses the Community Earth System Model version 2.2 (CESM2.2; Danabasoglu et al., 2020). The atmosphere component of CESM2.2 is the Community Atmosphere Model version 6 with full chemistry (CAM6-Chem; Emmons et al., 2020). CAM6-Chem incorporates the MOZART-TS2 gas-phase chemistry (Model of Ozone And Related chemical Tracers; Schwantes et al., 2020) with the volatility basis set (VBS) scheme for SOA formation (Tilmes et al., 2019). The VBS scheme considers the OH, O<sub>3</sub>, and NO<sub>3</sub> gas-phase oxidation of six BVOC species, including isoprene (ISOP), four monoterpenes (MTERP) – <inline-formula><mml:math id="M83" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene (APIN), <inline-formula><mml:math id="M84" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula>-pinene (BPIN), limonene (LIMON), and myrcene (MYRC) – and one lumped sesquiterpene, beta-caryophyllene (BCARY). Our work focuses on ISOP and MTERP. BCARY SOA is not considered, due to the large uncertainties surrounding the reaction sequence leading to formation and negligible contribution (<inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> %) to total OH-initiated biogenic SOA. The OH-oxidation accounts for the high-NO<sub><italic>x</italic></sub> (RO<sub>2</sub> <inline-formula><mml:math id="M88" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO) and low-NO<sub><italic>x</italic></sub> (RO<sub>2</sub> <inline-formula><mml:math id="M91" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub>) conditions (Hodzic et al., 2016; Jo et al., 2021) (Table 1). The VBS reactions produce semi-volatile SOA precursor gases (SOAG) into five logarithmically spaced bins based on their saturation concentration (<inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:msup><mml:mi>C</mml:mi><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>). These bins have <inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:msup><mml:mi>C</mml:mi><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> of 0.01, 0.1, 1, 10, and 100 <inline-formula><mml:math id="M95" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>g m<sup>−3</sup> at 300 K and are designated as SOAG0, SOAG1, SOAG2, SOAG3, SOAG4 in the model, respectively. The enthalpy of vaporization (<inline-formula><mml:math id="M97" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>H<sub>vap</sub>) for the five bins is 153, 142, 131, 120, and 109 kJ mol<sup>−1</sup> (Epstein et al., 2010; Hodzic et al., 2016), respectively. The SOAGs undergo gas-aerosol partitioning and form SOA in the Aitken and accumulation modes of the 4-mode version of the Modal Aerosol Model (MAM4; Liu et al., 2016). SOA is subject to photolysis loss at a constant rate of 0.04 % of <inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:msub><mml:mi>J</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (Hodzic et al., 2015). The MOZART-TS2 gas phase mechanism includes a more comprehensive BVOC gas-phase oxidation than is treated in the default VBS scheme. In addition to the reactions of RO<sub>2</sub>s with HO<sub>2</sub> and NO, its OH-oxidation mechanism includes the reactions of MTERP RO<sub>2</sub>s with NO<sub>3</sub>, CH<sub>3</sub>O<sub>2</sub>, CH<sub>3</sub>CO<sub>3</sub>, and selected RO<sub>2</sub> species, as well as reactions of ISOP RO<sub>2</sub>s with CH<sub>3</sub>O<sub>2</sub> and CH<sub>3</sub>CO<sub>3</sub>, along with the isomerization and dissociation of ISOP RO<sub>2</sub>s. These additional RO<sub>2</sub> loss pathways are not connected to SOA simulation. Also, the MOZART-TS2 reactions do not form SOAG.</p>

<table-wrap id="T1" specific-use="star"><label>Table 1</label><caption><p id="d2e1214">BVOC OH oxidation and RO<sub>2</sub> reactions in default CAM6-Chem VBS. For simplicity in this table, we use MTERP to represent the four monoterpenes in CAM6-Chem (APIN, BPIN, LIMON, and MYRC). ISOPO2VBS (C<sub>5</sub>H<sub>9</sub>O<sub>3</sub>) and MTERPO2VBS (C<sub>10</sub>H<sub>17</sub>O<sub>3</sub>) are first-generation peroxy radicals formed from isoprene (ISOP) and monoterpene (MTERP) oxidation by OH in VBS, respectively. Chemical formula for other species can be found in Table S2 of Schwantes et al. (2020).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="12cm"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Reactions</oasis:entry>
         <oasis:entry colname="col2">Rate (cm<sup>3</sup> molecule<sup>−1</sup> s<sup>−1</sup>)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">ISOP <inline-formula><mml:math id="M135" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH <inline-formula><mml:math id="M136" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> ISOP <inline-formula><mml:math id="M137" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH <inline-formula><mml:math id="M138" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPO2VBS</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.7</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">390</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">ISOPO2VBS <inline-formula><mml:math id="M140" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> <inline-formula><mml:math id="M142" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> HO<sub>2</sub> <inline-formula><mml:math id="M144" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0031SOAG0 <inline-formula><mml:math id="M145" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0035SOAG1 <inline-formula><mml:math id="M146" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0003 SOAG2 <inline-formula><mml:math id="M147" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0271SOAG3 <inline-formula><mml:math id="M148" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0474SOAG4</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.12</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">13</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1300</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">ISOPO2VBS <inline-formula><mml:math id="M150" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO <inline-formula><mml:math id="M151" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> NO <inline-formula><mml:math id="M152" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0003SOAG0 <inline-formula><mml:math id="M153" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0003SOAG1 <inline-formula><mml:math id="M154" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0073 SOAG2 <inline-formula><mml:math id="M155" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0057SOAG3 <inline-formula><mml:math id="M156" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0623SOAG4</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.7</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">360</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MTERP <inline-formula><mml:math id="M158" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH <inline-formula><mml:math id="M159" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> MTERP <inline-formula><mml:math id="M160" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH <inline-formula><mml:math id="M161" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MTERPO2VBS</oasis:entry>
         <oasis:entry colname="col2">See note<sup>*</sup></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MTERPO2VBS <inline-formula><mml:math id="M163" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> <inline-formula><mml:math id="M165" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> HO<sub>2</sub> <inline-formula><mml:math id="M167" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0508SOAG0 <inline-formula><mml:math id="M168" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.1149SOAG1 <inline-formula><mml:math id="M169" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0348 SOAG2 <inline-formula><mml:math id="M170" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0554SOAG3 <inline-formula><mml:math id="M171" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.1278SOAG4</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.6</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">13</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1300</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MTERPO2VBS <inline-formula><mml:math id="M173" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO <inline-formula><mml:math id="M174" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> NO <inline-formula><mml:math id="M175" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0245SOAG0 <inline-formula><mml:math id="M176" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0082SOAG1 <inline-formula><mml:math id="M177" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0772 SOAG2 <inline-formula><mml:math id="M178" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0332SOAG3 <inline-formula><mml:math id="M179" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.13SOAG4</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.7</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">360</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d2e1281"><sup>*</sup> The reaction rates for the OH oxidation of APIN, BPIN, LIMON, and MYRC are <inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.34</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">410</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.62</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">460</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.41</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">470</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> cm<sup>3</sup> molecule<sup>−1</sup> s<sup>−1</sup>, respectively.</p></table-wrap-foot></table-wrap>

      <p id="d2e2020">CAM6-Chem is coupled with the land component of CESM2 – the Community Land Model version 5 (CLM5, Lawrence et al., 2019). The model is run with the satellite phenology biogeochemistry configuration, where the land use and leaf area index are prescribed and not impacted by changes in CO<sub>2</sub> and climate. CLM5 includes the Model of Emissions of Gases and Aerosols from Nature (MEGAN) version 2.1 (Guenther et al., 2012), which prognostically calculates BVOC emissions accounting for vegetation types, light, temperature, leaf age, and CO<sub>2</sub>. In MEGAN, ISOP emissions are inhibited by elevated CO<sub>2</sub> level (Heald et al., 2009), while this effect does not influence MTERP emissions.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Expanded RO<sub>2</sub> chemistry</title>
      <p id="d2e2068">To improve the representation of biogenic SOA formation, we expand the RO<sub>2</sub> chemistry in the VBS scheme. As mentioned above, we focus on the RO<sub>2</sub> reactions related to OH-initiated biogenic SOA formation from MTERP and ISOP oxidation, which represents 58 % of total biogenic SOA in the baseline CAM6-chem under present-day (PD) climate conditions (estimated from the BASE experiment as described in Sect. 2.4). Hereafter, the RO<sub>2</sub> reactions and the formed SOA exclusively refer to those initiating from <inline-formula><mml:math id="M188" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MTERP</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">ISOP</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M189" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH reactions. We note that our mechanism focuses on gas-phase reactions, whereas the SOA formation through heterogeneous chemistry is not considered as in baseline CAM6-Chem and many other models (e.g., Lou et al., 2020; Bergman et al., 2022; Kirkevåg et al., 2018). The aqueous-phase reactions are particularly important for isoprene SOA formation (Marais et al., 2016; Paulot et al., 2009). Ignoring these pathways may overemphasize sensitivity to volatility and overlook the impact of SO<sub>2</sub> emissions on SOA formation through perturbations in aerosol acidity (Jo et al., 2021; Marais et al., 2016). Also, we only represent the fate of the first generation RO<sub>2</sub>, though later generation RO<sub>2</sub> are included in the RO<sub>2</sub> <inline-formula><mml:math id="M194" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions (see below for more details). Following the treatment in default MOZART-TS2, the RO<sub>2</sub> formed from the four MTERPs are lumped together in the modified VBS and assumed to have the same yields and reaction rates for the RO<sub>2</sub> reactions, due to a lack of comprehensive speciated data. We note that MTERP species have different structures and thus different distributions of reaction products. For example, LIMON has been found to have generally higher SOA yields than the other MTERPs (Lee et al., 2006; Pye et al., 2010). Therefore, the lumping treatment may bias the MTERP SOA burden and distributions.</p>
      <p id="d2e2189">Our modifications primarily focus on incorporating isomerization and RO<sub>2</sub> <inline-formula><mml:math id="M199" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions for the first-generation MTERP-RO<sub>2</sub> (Table 2). Following Pye et al. (2019), we allow 22 % of the formed MTERP-RO<sub>2</sub> to undergo isomerization and with a 50 % yield to the lowest volatility bin of SOAG (SOAG0) (Table 2, part 1). This is implemented by partitioning the total MTERP-RO<sub>2</sub> into two species (0.78 and 0.22 fractions) that undergo identical chemistry, except that only the latter is allowed to isomerize. The 22 % branching ratio is taken from the revised product yield of APINCO2 in the Table S1 of Pye et al. (2019), following the mechanism in Berndt et al. (2016) and Vereecken et al. (2007). The 50 % SOA yield is calculated following Eq. (S1) from Pye et al (2019) and their Table S2. To maintain computational efficiency and accommodate the complexity of the chemical mechanism in global models (consistent with the representation of other RO<sub>2</sub> pathways in the VBS), we collapse the multi-step autooxidation in Pye et al. (2019) into a single-step reaction, by only representing the first-generation branching point and the final SOA yield. In the original mechanism of Pye et al. (2019), the subsequent reactions of the first generation RO<sub>2</sub> and its products are also NO<sub><italic>x</italic></sub>-dependent, with reactions with NO forming volatile compounds and competing with subsequent autooxidation. The SOA yield (50 %) in our implementation is the maximum yield, assuming no subsequent competing bimolecular reactions. Therefore, our simplification does not fully represent the sensitivity of isomerization yields to NO<sub><italic>x</italic></sub>, which may particularly result in overestimation of SOA formation from isomerization under high-NO<sub><italic>x</italic></sub> conditions. This bias can influence our estimates of the SOA trends from the past to the future, as further discussed in Sect. 3.2. The temperature-dependent isomerization reaction rate was estimated using a rate constant of 0.28 s<sup>−1</sup> at 293 K (Pye et al., 2019) and an activation energy barrier of 18 kcal mol<sup>−1</sup> (Bianchi et al., 2019). It is important to note that the branching ratio, SOA yields, and reaction rates are subjected to significant uncertainties, and we have applied the values from Pye et al. (2019) for <inline-formula><mml:math id="M211" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene to all monoterpenes. This may introduce substantial uncertainty into our mechanism, given differences in the related parameters for other MTERPs. For example, Piletic and Kleindienst (2022) suggest that the branching ratio of RO<sub>2</sub> that can isomerize is similar for <inline-formula><mml:math id="M213" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene and <inline-formula><mml:math id="M214" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula>-pinene but is likely higher for limonene. However, these uncertainties are generally poorly constrained. Also, the isomerization rate used in this study may lie at the lower end – Xu et al. (2019) reported unimolecular rate constants of 4 <inline-formula><mml:math id="M215" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 2 and 16 <inline-formula><mml:math id="M216" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 5 s<sup>−1</sup> at 296 K for <inline-formula><mml:math id="M218" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene and <inline-formula><mml:math id="M219" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula>-pinene, respectively. Nevertheless, even with these slower rates, isomerization remains relatively fast compared with competing bimolecular reactions, especially under clean and/or warm conditions (Fig. 1). Overall, more chamber experiments and ambient observations are needed to better constrain the MTERP-RO<sub>2</sub> isomerization pathway. The fast rate, along with the high SOAG yields, leads to rapid production of large amounts of SOA from isomerization. Moreover, isomerization is highly temperature-dependent as compared to the bimolecular reactions (Fig. 1).</p>

<table-wrap id="T2" specific-use="star"><label>Table 2</label><caption><p id="d2e2398">Newly implemented reactions for MTERP-RO<sub>2</sub> (MTERPO2VBS) in VBS. Units for isomerization reaction rate constants are s<sup>−1</sup> and those for the RO<sub>2</sub> <inline-formula><mml:math id="M224" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions and other terpene RO<sub>2</sub> reactions are cm<sup>3</sup> molecule<sup>−1</sup> s<sup>−1</sup>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Reactions</oasis:entry>
         <oasis:entry namest="col2" nameend="col3">Reaction rate constant </oasis:entry>
         <oasis:entry colname="col4">References</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3"><italic>Part 1. Isomerization</italic><sup>*</sup></oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MTERPO2VBS <inline-formula><mml:math id="M250" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.5SOAG0 <sup>[a]</sup></oasis:entry>
         <oasis:entry namest="col2" nameend="col3"><inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:mn mathvariant="normal">7.48</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">12</mml:mn></mml:msup><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">9058</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>[</mml:mo><mml:mi mathvariant="normal">a</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">b</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><sup>[a]</sup> Pye et al. (2019);</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"><sup>[b]</sup> Bianchi et al. (2019)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3"><italic>Part 2. RO</italic><sub><italic>2</italic></sub> <inline-formula><mml:math id="M256" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <italic>RO</italic><sub><italic>2</italic></sub> <italic>reactions</italic></oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Fast</oasis:entry>
         <oasis:entry colname="col3">Slow</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry rowsep="1" colname="col1">MTERPO2VBS <inline-formula><mml:math id="M258" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOP-RO<sub>2</sub><sup>†</sup> <inline-formula><mml:math id="M261" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.04SOAG0 <sup>[c]</sup></oasis:entry>
         <oasis:entry rowsep="1" colname="col2"><inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <sup>[d]</sup></oasis:entry>
         <oasis:entry rowsep="1" colname="col3"><inline-formula><mml:math id="M265" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <sup>[d]</sup></oasis:entry>
         <oasis:entry colname="col4"><sup>[c]</sup> Zhao et al. (2018);</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry rowsep="1" colname="col1">MTERPO2VBS <inline-formula><mml:math id="M268" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> IEPOXOO<sup>‡</sup> <inline-formula><mml:math id="M270" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.04SOAG0 <sup>[c]</sup></oasis:entry>
         <oasis:entry rowsep="1" colname="col2"><inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <sup>[d]</sup></oasis:entry>
         <oasis:entry rowsep="1" colname="col3"><inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <sup>[d]</sup></oasis:entry>
         <oasis:entry colname="col4"><sup>[d]</sup> Berndt et al. (2018b);</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry rowsep="1" colname="col1">MTERPO2VBS <inline-formula><mml:math id="M277" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MTERPO2VBS <inline-formula><mml:math id="M278" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.04SOAG0 <sup>[c]</sup></oasis:entry>
         <oasis:entry rowsep="1" colname="col2"><inline-formula><mml:math id="M280" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <sup>[d]</sup></oasis:entry>
         <oasis:entry rowsep="1" colname="col3"><inline-formula><mml:math id="M282" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <sup>[c]</sup></oasis:entry>
         <oasis:entry colname="col4"><sup>[e]</sup> Berndt et al. (2018a)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry rowsep="1" colname="col1">MTERPO2VBS <inline-formula><mml:math id="M285" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> BCARYO2VBS<sup><italic>§</italic></sup> <inline-formula><mml:math id="M287" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.04SOAG0 <sup>[c]</sup></oasis:entry>
         <oasis:entry rowsep="1" colname="col2"><inline-formula><mml:math id="M289" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <sup>[d]</sup></oasis:entry>
         <oasis:entry rowsep="1" colname="col3"><inline-formula><mml:math id="M291" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <sup>[c]</sup></oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MTERPO2VBS <inline-formula><mml:math id="M293" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> TP2-RO<sub>2</sub><sup><italic>¶</italic></sup> <inline-formula><mml:math id="M296" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.04SOAG0 <sup>[c]</sup></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M298" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.6</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <sup>[e]</sup></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M300" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <sup>[c]</sup></oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3"><italic>Part 3. Other terpene RO</italic><sub><italic>2</italic></sub> <italic>reactions that are newly added to VBS but do not form SOAG</italic></oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry rowsep="1" colname="col1">MTERPO2VBS <inline-formula><mml:math id="M303" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO<sub>3</sub> <inline-formula><mml:math id="M305" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> NO<sub>3</sub></oasis:entry>
         <oasis:entry rowsep="1" namest="col2" nameend="col3" align="center"><inline-formula><mml:math id="M307" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.3</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">Schwantes et al. (2020)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry rowsep="1" colname="col1">MTERPO2VBS <inline-formula><mml:math id="M308" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub> <inline-formula><mml:math id="M311" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub></oasis:entry>
         <oasis:entry rowsep="1" namest="col2" nameend="col3" align="center"><inline-formula><mml:math id="M314" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MTERPO2VBS <inline-formula><mml:math id="M315" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>CO<sub>3</sub> <inline-formula><mml:math id="M318" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> CH<sub>3</sub>CO<sub>3</sub></oasis:entry>
         <oasis:entry namest="col2" nameend="col3" align="center"><inline-formula><mml:math id="M321" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">500</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d2e2490"><sup>*</sup> Only 22 % of MTERPO2VBS can isomerize (Pye et al., 2019). <sup>†</sup> ISOP-RO<sub>2</sub> denotes six first generation ISOP-RO<sub>2</sub> species from MOZART-TS2, including ISOPED1O2, ISOPB1O2, ISOPZD1O2, ISOPED4O2, ISOPB4O2, and ISOPZD4O2. <sup>‡</sup> IEPOXOO (C<sub>5</sub>H<sub>9</sub>O<sub>5</sub>) is the peroxy radical formed from IEPOX <inline-formula><mml:math id="M238" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH. <sup><italic>§</italic></sup> BCARYO2VBS (C<sub>15</sub>H<sub>25</sub>O<sub>3</sub>, also referred to as BCARY-RO<sub>2</sub> in the text) is the first-generation RO<sub>2</sub> generated from BCARY <inline-formula><mml:math id="M245" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH. <sup><italic>¶</italic></sup> TP2-RO<sub>2</sub> denotes RO<sub>2</sub> formed through terpenes ozonolysis and those from the second and later generation oxidation in MOZART-TS2 (Schwantes et al., 2020), including TERP1OOHO2, TERP2OOHO2, TERPA1O2, TERPA2CO3, TERPA2O2, TERPA3CO3, TERPA3O2, TERPA4O2, TERPACO3, TERPF1O2, and TERPF2O2.</p></table-wrap-foot></table-wrap>

      <fig id="F1" specific-use="star"><label>Figure 1</label><caption><p id="d2e3714">Loss rates for various MTERP-RO<sub>2</sub> reactions as a function of temperature at <bold>(a)</bold> Beijing, <bold>(b)</bold> Seattle, and <bold>(c)</bold> Amazon. The rates are calculated based on reactant concentrations in June from the NEW_slow experiment, except for the fast RO<sub>2</sub> <inline-formula><mml:math id="M324" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions, which use results from the NEW_fast experiment.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f01.png"/>

        </fig>

      <p id="d2e3767">Next, we introduce RO<sub>2</sub> <inline-formula><mml:math id="M327" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> for MTERP-RO<sub>2</sub>, considering the reactions with first-generation ISOP-RO<sub>2</sub>, IEPOXOO, first-generation MTERP-RO<sub>2</sub> and BCARY-RO<sub>2</sub> (formed through the BCARY <inline-formula><mml:math id="M333" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH reaction), the terpene RO<sub>2</sub> formed through terpene ozonolysis and the second or later generation oxidation (Table 2, part 2). These reactants are produced in MOZART-TS2. The reactions with nitrogen-containing biogenic RO<sub>2</sub> and RO<sub>2</sub> formed from the oxidation of other organics are not included. We note that for the same set of reactions, the rate coefficients reported by different laboratory studies vary by up to two orders of magnitude (Berndt et al., 2018a, b; Zhao et al., 2018), highlighting the substantial uncertainty associated with these reactions rates. Therefore, following Xu et al. (2022), we classified and tested the RO<sub>2</sub> <inline-formula><mml:math id="M338" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reaction rates as either fast or slow combinations. Moreover, the SOA yields of the RO<sub>2</sub> <inline-formula><mml:math id="M341" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions are another source of uncertainty. Zhao et al. (2018) conducted experiments on <inline-formula><mml:math id="M343" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula>-pinene oxidation and reported a lower-limit dimer formation branching ratio of 4 %. They estimated that the volatility of these accretion products is well below 0.01 <inline-formula><mml:math id="M344" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>g m<sup>−3</sup>. Therefore, we assume all the RO<sub>2</sub> <inline-formula><mml:math id="M347" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions form 4 % of SOAG0. This 4 % molar yield is also incorporated in the modeling study of Xu et al. (2022). However, it is noted that SOAG0 has a fixed molar mass of 250 g mol<sup>−1</sup>, while the molar mass of the accretion products varies from 302 to 438 g mol<sup>−1</sup>. Ideally, the molar yield should be scaled according to the molar mass ratio of the dimers to SOAG0, and our current fixed yield likely results in a modest underprediction of RO<sub>2</sub> <inline-formula><mml:math id="M352" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> SOA. In addition, this fixed yield is likely an uncertain simplification, since the yields of accretion products are expected to be higher for reactions involving larger and/or more oxygenated RO<sub>2</sub> species (Berndt et al., 2018b; Franzon, 2023). The SOA formed through non-accretion products from the RO<sub>2</sub> <inline-formula><mml:math id="M356" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions is neglected, which likely underpredicts SOA formed through this pathway. Overall, our representation of SOA formed through RO<sub>2</sub> <inline-formula><mml:math id="M359" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions likely lies at the lower end. Moreover, to examine the RO<sub>2</sub> fate and contribution to SOA formation from each reaction, we track SOA formed from individual BVOC reactions separately in our experiments. SOA formed through MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M363" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOP-RO<sub>2</sub> are classified as MTERP SOA.</p>
      <p id="d2e4115">Finally, we characterize the fates of the RO<sub>2</sub> that are included in the MOZART chemistry but do not form SOA in the VBS. For MTERP-RO<sub>2</sub>, we implement their reactions with NO<sub>3</sub>, CH<sub>3</sub>O<sub>2</sub>, and CH<sub>3</sub>CO<sub>3</sub> in the VBS (Table 2, part 3). Assuming these reactions do not form SOA may result in some underprediction in total MTERP SOA amount. Mayhew et al. (2025) reported that reactions with CH<sub>3</sub>CO<sub>3</sub> can contribute to regional SOA formation by implementing accretion reactions generated by a chemical mechanism generator into a chemical transport model. A laboratory study also implies that highly oxygenated organic compounds (HOM) alkoxy radicals formed through HOM-RO<sub>2</sub> <inline-formula><mml:math id="M375" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions may undergo isomerization and propagate low volatility HOM formation (Kang et al., 2025). However, these pathways are not well constrained. For ISOP-RO<sub>2</sub>, instead of generating a new RO<sub>2</sub> species (i.e., ISOPO2VBS in Table 1), we directly use the six ISOP-RO<sub>2</sub> (ISOPED1O2, ISOPB1O2, ISOPZD1O2, ISOPED4O2, ISOPB4O2, and ISOPZD4O2) formed from the MOZART-TS2 chemistry in the RO<sub>2</sub> <inline-formula><mml:math id="M381" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> and RO<sub>2</sub> <inline-formula><mml:math id="M384" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO reactions in VBS (i.e., replace the ISOP reactions in Table 1 with those in Table 3, part 1). In this way, the VBS and MOZART-TS2 are coupled for ISOP-RO<sub>2</sub>, and additional key ISOP-RO<sub>2</sub> reactions (isomerization, dissociation, and reactions with CH<sub>3</sub>O<sub>2</sub>, and CH<sub>3</sub>CO<sub>3</sub>) (Table 3, part 2) are considered in the VBS. These reactions do not form SOAG but represent additional loss pathways for RO<sub>2</sub> within the VBS, which would reduce SOA formation via competition with the SOAG-producing reactions. In our mechanism, we assume that ISOP-RO<sub>2</sub> isomerization does not form SOAG because the isomerization products are volatile (D'Ambro et al., 2017). However, a recent study found that isomerization of ISOP-RO<sub>2</sub> forms SOA with molar yields of 0.13 %–0.35 % (Berndt et al., 2025), suggesting that the global total isoprene SOA yields in our simulations may be a lower limit. In addition, we did not represent ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M395" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOP-RO<sub>2</sub> reactions, which may potentially contribute to ISOP-RO<sub>2</sub> fate and SOA formation but are highly uncertain (Wennberg et al., 2018).</p>

<table-wrap id="T3" specific-use="star"><label>Table 3</label><caption><p id="d2e4415">ISOP-RO<sub>2</sub> reactions in the modified VBS and the related RO<sub>2</sub> fate in MOZART. Units for reaction rate constants are cm<sup>3</sup> molecule<sup>−1</sup> s<sup>−1</sup>, except for specific notations.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="11cm"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Reactions</oasis:entry>

         <oasis:entry colname="col2">Rate constant</oasis:entry>

       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">

         <oasis:entry namest="col1" nameend="col2" align="left"><italic>Part 1. ISOP-RO</italic><sub><italic>2</italic></sub><sup>*</sup> <italic>reactions in VBS</italic></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M411" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> <inline-formula><mml:math id="M413" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M415" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> <inline-formula><mml:math id="M417" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0031SOAG0 <inline-formula><mml:math id="M418" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0035 SOAG1 <inline-formula><mml:math id="M419" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0003SOAG2 <inline-formula><mml:math id="M420" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0271SOAG3 <inline-formula><mml:math id="M421" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0474SOAG4</oasis:entry>

         <oasis:entry colname="col2"><inline-formula><mml:math id="M422" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.12</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">13</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1300</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M424" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO <inline-formula><mml:math id="M425" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M427" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO <inline-formula><mml:math id="M428" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0003SOAG0 <inline-formula><mml:math id="M429" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0003 SOAG1 <inline-formula><mml:math id="M430" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0073SOAG2 <inline-formula><mml:math id="M431" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0057SOAG3 <inline-formula><mml:math id="M432" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.0623SOAG4</oasis:entry>

         <oasis:entry colname="col2"><inline-formula><mml:math id="M433" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.7</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">360</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry namest="col1" nameend="col2" align="left"><italic>Part 2. Related ISOP-RO</italic><sub><italic>2</italic></sub> <italic>fate in MOZART</italic></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPZD1O2 <inline-formula><mml:math id="M435" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.15HPALDB1C <inline-formula><mml:math id="M436" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.25HPALD1 <inline-formula><mml:math id="M437" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.4HO<sub>2</sub>  <inline-formula><mml:math id="M439" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.6OH <inline-formula><mml:math id="M440" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.6DHPMPAL <inline-formula><mml:math id="M441" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.6CO</oasis:entry>

         <oasis:entry colname="col2"><inline-formula><mml:math id="M442" display="inline"><mml:mrow><mml:mn mathvariant="normal">5.05</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">15</mml:mn></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12200</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">8</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msup><mml:mi>T</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mo>)</mml:mo><mml:mo>†</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPZD4O2 <inline-formula><mml:math id="M443" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.15HPALDB4C <inline-formula><mml:math id="M444" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.25HPALD4 <inline-formula><mml:math id="M445" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.4HO<sub>2</sub>  <inline-formula><mml:math id="M447" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.6OH <inline-formula><mml:math id="M448" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.6DHPMPAL <inline-formula><mml:math id="M449" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.6CO</oasis:entry>

         <oasis:entry colname="col2"><inline-formula><mml:math id="M450" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.22</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">9</mml:mn></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7160</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">8</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msup><mml:mi>T</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mo>)</mml:mo><mml:mo>†</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPB1O2 <inline-formula><mml:math id="M451" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> MVK <inline-formula><mml:math id="M452" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>2</sub>O <inline-formula><mml:math id="M454" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH</oasis:entry>

         <oasis:entry colname="col2"><inline-formula><mml:math id="M455" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.04</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">11</mml:mn></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">9746</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo><mml:mo>†</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPB4O2 <inline-formula><mml:math id="M456" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M457" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>2</sub>O <inline-formula><mml:math id="M459" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH</oasis:entry>

         <oasis:entry colname="col2"><inline-formula><mml:math id="M460" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.88</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">11</mml:mn></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">9752</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo><mml:mo>†</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1">ISOPED1O2 <inline-formula><mml:math id="M461" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub> <inline-formula><mml:math id="M464" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.25CH<sub>3</sub>OH <inline-formula><mml:math id="M466" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.25ISOPOH <inline-formula><mml:math id="M467" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.75CH<sub>2</sub>O  <inline-formula><mml:math id="M469" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.72HO<sub>2</sub> <inline-formula><mml:math id="M471" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28CO <inline-formula><mml:math id="M472" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28OH <inline-formula><mml:math id="M473" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28MVKOOH <inline-formula><mml:math id="M474" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.47HYDRALD</oasis:entry>

         <oasis:entry rowsep="1" colname="col2" morerows="1"><inline-formula><mml:math id="M475" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPZD1O2 <inline-formula><mml:math id="M476" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub> <inline-formula><mml:math id="M479" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.25CH<sub>3</sub>OH <inline-formula><mml:math id="M481" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.25ISOPOH <inline-formula><mml:math id="M482" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.75CH<sub>2</sub>O  <inline-formula><mml:math id="M484" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.72HO<sub>2</sub> <inline-formula><mml:math id="M486" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28CO <inline-formula><mml:math id="M487" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28OH <inline-formula><mml:math id="M488" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28MVKOOH <inline-formula><mml:math id="M489" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.47HYDRALD</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPB4O2 <inline-formula><mml:math id="M490" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub> <inline-formula><mml:math id="M493" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.25CH<sub>3</sub>OH <inline-formula><mml:math id="M495" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.25HYDRALD <inline-formula><mml:math id="M496" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.25ISOPOH  <inline-formula><mml:math id="M497" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 1.25CH<sub>2</sub>O <inline-formula><mml:math id="M499" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> <inline-formula><mml:math id="M501" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.5MACR</oasis:entry>

         <oasis:entry colname="col2"><inline-formula><mml:math id="M502" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.4</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1">ISOPZD4O2 <inline-formula><mml:math id="M503" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub> <inline-formula><mml:math id="M506" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.25CH<sub>3</sub>OH <inline-formula><mml:math id="M508" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.25ISOPOH <inline-formula><mml:math id="M509" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.75CH<sub>2</sub>O  <inline-formula><mml:math id="M511" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.72HO<sub>2</sub> <inline-formula><mml:math id="M513" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28CO <inline-formula><mml:math id="M514" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28OH <inline-formula><mml:math id="M515" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28MACROOH <inline-formula><mml:math id="M516" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.47HYDRALD</oasis:entry>

         <oasis:entry rowsep="1" colname="col2" morerows="1"><inline-formula><mml:math id="M517" display="inline"><mml:mrow><mml:mn mathvariant="normal">9.8</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">13</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPED4O2 <inline-formula><mml:math id="M518" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub> <inline-formula><mml:math id="M521" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.25CH<sub>3</sub>OH <inline-formula><mml:math id="M523" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.25ISOPOH <inline-formula><mml:math id="M524" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.75CH<sub>2</sub>O  <inline-formula><mml:math id="M526" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.72HO<sub>2</sub> <inline-formula><mml:math id="M528" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28CO <inline-formula><mml:math id="M529" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28OH <inline-formula><mml:math id="M530" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.28MACROOH <inline-formula><mml:math id="M531" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.47HYDRALD</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPB1O2 <inline-formula><mml:math id="M532" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub> <inline-formula><mml:math id="M535" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 1.75CH<sub>2</sub>O <inline-formula><mml:math id="M537" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.25ISOPOH <inline-formula><mml:math id="M538" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.75MVK <inline-formula><mml:math id="M539" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 1.5HO<sub>2</sub></oasis:entry>

         <oasis:entry colname="col2"><inline-formula><mml:math id="M541" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.6</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">13</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1">ISOPED1O2 <inline-formula><mml:math id="M542" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>CO<sub>3</sub> <inline-formula><mml:math id="M545" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.45HO<sub>2</sub> <inline-formula><mml:math id="M547" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.45HYDRALD <inline-formula><mml:math id="M548" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.55CO <inline-formula><mml:math id="M549" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.55 OH <inline-formula><mml:math id="M550" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.55MVKOOH <inline-formula><mml:math id="M551" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CO<sub>2</sub> <inline-formula><mml:math id="M553" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub></oasis:entry>

         <oasis:entry colname="col2" morerows="5"><inline-formula><mml:math id="M556" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup><mml:mo>×</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">500</mml:mn><mml:mo>/</mml:mo><mml:mi>T</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPB1O2 <inline-formula><mml:math id="M557" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>  CH<sub>3</sub>CO<sub>3</sub> <inline-formula><mml:math id="M560" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> MVK <inline-formula><mml:math id="M561" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>2</sub>O <inline-formula><mml:math id="M563" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> <inline-formula><mml:math id="M565" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CO<sub>2</sub> <inline-formula><mml:math id="M567" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPZD1O2 <inline-formula><mml:math id="M570" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>CO<sub>3</sub> <inline-formula><mml:math id="M573" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.45HO<sub>2</sub> <inline-formula><mml:math id="M575" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.45HYDRALD <inline-formula><mml:math id="M576" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.55CO <inline-formula><mml:math id="M577" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.55OH <inline-formula><mml:math id="M578" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.55MVKOOH <inline-formula><mml:math id="M579" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CO<sub>2</sub> <inline-formula><mml:math id="M581" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPED4O2 <inline-formula><mml:math id="M584" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>CO<sub>3</sub> <inline-formula><mml:math id="M587" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.45HO<sub>2</sub> <inline-formula><mml:math id="M589" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.45HYDRALD <inline-formula><mml:math id="M590" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.55CO <inline-formula><mml:math id="M591" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>  0.55OH <inline-formula><mml:math id="M592" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.55MACROOH <inline-formula><mml:math id="M593" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CO<sub>2</sub> <inline-formula><mml:math id="M595" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">ISOPB4O2 <inline-formula><mml:math id="M598" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>CO<sub>3</sub> <inline-formula><mml:math id="M601" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M602" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>2</sub>O <inline-formula><mml:math id="M604" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> <inline-formula><mml:math id="M606" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CO<sub>2</sub> <inline-formula><mml:math id="M608" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">ISOPZD4O2 <inline-formula><mml:math id="M611" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>CO<sub>3</sub> <inline-formula><mml:math id="M614" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> 0.45HO<sub>2</sub> <inline-formula><mml:math id="M616" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.45HYDRALD <inline-formula><mml:math id="M617" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.55CO <inline-formula><mml:math id="M618" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>  0.55OH <inline-formula><mml:math id="M619" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.55MACROOH <inline-formula><mml:math id="M620" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CO<sub>2</sub> <inline-formula><mml:math id="M622" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> CH<sub>3</sub>O<sub>2</sub></oasis:entry>

       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d2e4469"><sup>*</sup> ISOP-RO<sub>2</sub> denotes six first generation ISOP-RO<sub>2</sub> species from MOZART-TS2, including ISOPED1O2, ISOPB1O2, ISOPZD1O2, ISOPED4O2, ISOPB4O2, and ISOPZD4O2. <sup>†</sup> Units: s<sup>−1</sup>.</p></table-wrap-foot></table-wrap>

</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Modifications to SOA photolysis</title>
      <p id="d2e6687">Another source of uncertainty lies in the representation of SOA photolysis. The standard CAM6-Chem assumes that all SOA is subject to photolysis at a constant rate. However, laboratory studies have reported a photo-recalcitrant fraction ranging from 7 % to 90 % (O'Brien and Kroll, 2019; Sun and Smith, 2024; Zawadowicz et al., 2020). Neglecting this fraction likely results in an overestimation of SOA photochemical loss and thus an underprediction of SOA mass in model simulations. Therefore, as a simple step to mimic the photo-recalcitrant fraction as observed in laboratory studies, we turn off the photolysis of SOA in the lowest volatility bin. This modification results in a mean photo-recalcitrant fraction of 29 % in the modified mechanism (calculated based on 1-year experiment using NEW_slow chemical mechanism; see Sect. 2.4 for details about NEW_slow). However, this simplification may overemphasize the isomerization and RO<sub>2</sub> <inline-formula><mml:math id="M626" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions, which form SOA solely in the lowest volatility bin (Table 2, part 1 and part 2). We conduct a sensitivity experiment to show that this does not substantially change the fraction of SOA from each RO<sub>2</sub> pathway (see details in Sect. S1). In addition, the SOA photolysis rate is another important source of uncertainty. Some chamber experiments show that the rate can reach as high as 2 % of <inline-formula><mml:math id="M629" display="inline"><mml:mrow><mml:msub><mml:mi>J</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (Henry and Donahue, 2012; Krapf et al., 2016), while recent laboratory studies reported rate of 0.025 % <inline-formula><mml:math id="M630" display="inline"><mml:mrow><mml:msub><mml:mi>J</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (Baboomian et al., 2020; Sun and Smith, 2024). Since the rate used in standard CAM6-Chem (0.04 % <inline-formula><mml:math id="M631" display="inline"><mml:mrow><mml:msub><mml:mi>J</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) is in general agreement with the more recent studies (Baboomian et al., 2020; Sun and Smith, 2024), we leave the photolysis rate unchanged.</p>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Experiments</title>
      <p id="d2e6778">We conduct three sets of CAM6-Chem experiments with prescribed sea surface temperature (SST) and sea ice. First, we compare the default configuration with the modified RO<sub>2</sub> chemistry through three experiments: BASE, NEW_fast, and NEW_slow. The BASE experiment represents the default chemical mechanism (with our updates to the treatment of SOA photolysis), while NEW_fast and NEW_slow incorporate modified RO<sub>2</sub> chemistry with fast and slow RO<sub>2</sub> <inline-formula><mml:math id="M635" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reaction rates, respectively. These three experiments utilize SST, sea ice, CO<sub>2</sub> concentrations, anthropogenic and natural emissions of aerosols and reactive gases, and land use data from 2010, representing PD conditions. Second, we perform two experiments – the PI and F experiments – with modified RO<sub>2</sub> chemistry that incorporates slow RO<sub>2</sub> <inline-formula><mml:math id="M640" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reaction rates under pre-industrial (PI; 1850) and future (F; 2100) conditions (i.e., SST, CO<sub>2</sub> concentrations, anthropogenic and natural emissions, and land use). Detailed settings for the PI, PD, and F conditions are provided in Sect. S2. The future conditions follow the Shared Socioeconomic Pathway 5-8.5 (hereafter SSP5), which assumes a fossil-based economy with high CO<sub>2</sub> levels and projected temperature increase (Riahi et al., 2017). This is also a strong pollution control scenario, which reduces future anthropogenic emissions of aerosols and reactive gases compared to PD levels (Rao et al., 2017). We chose SSP5 because it is considered as the most severe scenario, providing the strongest contrast to PD and PI in temperature and CO<sub>2</sub> level. However, it is noted that SSP5 is an extreme case and debated to be implausible (Hausfather and Peters, 2020). Thus, the magnitude (though not the sign) of our PD to F results may be significantly different if considering another future scenario. By comparing PI and F with the NEW_slow (PD) experiment, we investigate how the RO<sub>2</sub> fate and SOA formation change from the past to present and future. Finally, to isolate the chemistry impacts, we conduct two additional experiments that are the same as PI and F, except with fixed BVOC emissions at PD level (i.e., PI_PDB and F_PDB). All experiments are performed with a horizontal resolution of 0.9° <inline-formula><mml:math id="M646" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 1.25° and 32 vertical layers. The model is integrated for 11 years in a free-running configuration and using cyclically repeated one-year input data. Therefore, the simulated results represent repeated time-slice forcing. The first simulation year is treated as spin-up, and the results are shown as 10-year averages to minimize interannual climate variability.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>SOA formation in PD</title>
      <p id="d2e6928">We examine the globally and annually averaged RO<sub>2</sub> fate (<inline-formula><mml:math id="M648" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub>) and the contribution of each reaction pathway to total SOA (<inline-formula><mml:math id="M650" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA) in PD in Fig. 2. To calculate <inline-formula><mml:math id="M651" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub>, we scale the <inline-formula><mml:math id="M653" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> for individual RO<sub>2</sub> species with the corresponding branching ratios and weight the gridded <inline-formula><mml:math id="M656" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> by RO<sub>2</sub> concentrations (see Sect. S3 for more details).</p>

      <fig id="F2" specific-use="star"><label>Figure 2</label><caption><p id="d2e7033">Vertically integrated and globally and annually averaged RO<sub>2</sub> fate (<inline-formula><mml:math id="M660" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub>; left panel) weighted by gridded RO<sub>2</sub> concentrations and the percentage contribution of each reaction pathway to total SOA burden (<inline-formula><mml:math id="M663" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA; right panel) for MTERP (upper panel) and ISOP (lower panel). Results are shown for the BASE, NEW_fast, and NEW_slow experiments. Different reactions are categorized by colors. For MTERP-RO<sub>2</sub>, the RO<sub>2</sub> <inline-formula><mml:math id="M666" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions include those between MTERP-RO<sub>2</sub> and ISOP-RO<sub>2</sub>, IEPOXOO, MTERP-RO<sub>2</sub> itself, BCARY-RO<sub>2</sub>, and later generations of terpene RO<sub>2</sub> (Table 2, part 2), while the reactions with NO<sub>3</sub>, CH<sub>3</sub>O<sub>2</sub>, and CH<sub>3</sub>CO<sub>3</sub> are included in “Others” (Table 2, part 3). For ISOP-RO<sub>2</sub>, the RO<sub>2</sub> <inline-formula><mml:math id="M680" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions include ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M683" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MTERP-RO<sub>2</sub> and ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M686" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> BCARY-RO<sub>2</sub> reactions, while “Others” include ISOP-RO<sub>2</sub> decomposition and the reactions with CH<sub>3</sub>O<sub>2</sub> and CH<sub>3</sub>CO<sub>3</sub>. To avoid double counting, we classify the SOA formed through ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M694" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MTERP-RO<sub>2</sub> solely as MTERP SOA.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f02.png"/>

        </fig>

      <p id="d2e7367">For MTERP-RO<sub>2</sub>, isomerization accounts for <inline-formula><mml:math id="M697" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 19 % of <inline-formula><mml:math id="M698" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> in the two NEW experiments (Fig. 2a). Since we assume that only 22 % of MTERP-RO<sub>2</sub> can isomerize, this contribution is substantial, indicating that isomerization is nearly saturated in this branch because the reaction rate of isomerization generally exceeds that of bimolecular reactions (Fig. 1). This agrees with Xu et al. (2022), who also found isomerization to be the dominant fate for the MTERP-RO<sub>2</sub> branch that can undergo unimolecular reaction. Isomerization forms a large amount of low volatility products, making it a major contributor to total MTERP SOA formation (46 % in NEW_fast and 44 % in NEW_slow) (Fig. 2b). This highlights the important role of including MTERP-RO<sub>2</sub> isomerization in SOA formation parameterizations. We note that uncertainties in model parameters discussed in Sect. 2.2 and 2.3 could alter the estimated contribution of the isomerization pathway. In particular, the upper-limit 50 % yield and applying the photo-recalcitrant fraction only to the lowest volatility bin (see Sect. S1) could over-emphasize isomerization. Conversely, neglecting higher branching ratios and yields for limonene SOA may underestimate the importance of isomerization for total SOA formation from monoterpenes.</p>
      <p id="d2e7431">The contribution of MTERP RO<sub>2</sub> <inline-formula><mml:math id="M704" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions to <inline-formula><mml:math id="M706" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> depends on the reactions rates (36 % with faster reaction rates in NEW_fast and 17 % with slower reaction rates in NEW_slow). However, their contribution to total MTERP SOA is minor (8 % in NEW_fast and 3 % in NEW_slow). This is likely an underprediction, because only 4 % of SOAG0 is formed through these reactions, and SOA formation through non-accretion products is neglected (as discussed in Sect. 2.2). Overall, the newly included reactions account for 40 %–57 % of <inline-formula><mml:math id="M708" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> and 47 %–54 % of <inline-formula><mml:math id="M710" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA in the NEW experiments, significantly modifying the MTERP-RO<sub>2</sub> chemistry from the BASE experiment. MTERP-RO<sub>2</sub> reactions with HO<sub>2</sub> and NO account for 20 % and 24 % of <inline-formula><mml:math id="M714" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> in NEW_fast, and 31 % and 29 % in NEW_slow, respectively (Fig. 2a). Compared with BASE (<inline-formula><mml:math id="M716" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> for the HO<sub>2</sub> pathway is 62 %), the contributions of RO<sub>2</sub> <inline-formula><mml:math id="M720" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> to <inline-formula><mml:math id="M722" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> in the NEW experiments are largely supplemented by the isomerization and accretion reactions, which also favor clean conditions. We note that Xu et al. (2022) show a higher RO<sub>2</sub> fate from MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M726" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> reaction, which may indicate different global distributions of NO and VOCs. For <inline-formula><mml:math id="M728" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA, the contribution from MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M730" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> (31 %–37 %) is higher than that from MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M733" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO (15 %–16 %), as expected, because products formed through reactions with NO are generally more volatile than those formed through reactions with HO<sub>2</sub>. Reactions with NO<sub>3</sub>, CH<sub>3</sub>O<sub>2</sub>, and CH<sub>3</sub>CO<sub>3</sub> only account for 2 %–4 % of <inline-formula><mml:math id="M740" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub>. Thus, should any of these reactions form SOA, their contribution to the total MTERP SOA is likely to be minor.</p>
      <p id="d2e7765">The two NEW experiments have identical isoprene RO<sub>2</sub> chemistry and thus show similar <inline-formula><mml:math id="M743" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> distributions for ISOP-RO<sub>2</sub>, with the exception that the NEW_slow has a slightly larger RO<sub>2</sub> <inline-formula><mml:math id="M747" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> fate than NEW_fast due to higher terpene RO<sub>2</sub> concentrations resulting from slower MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M751" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reaction rates (Fig. 2c). In NEW_slow, contributions from RO<sub>2</sub> <inline-formula><mml:math id="M754" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub>, RO<sub>2</sub> <inline-formula><mml:math id="M757" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO, isomerization, RO<sub>2</sub> <inline-formula><mml:math id="M759" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub>, and other reactions are 50 %, 30 %, 11 %, 1 %, and 9 %, respectively. Compared to BASE, the NEW experiments show 20 %–21 % additional RO<sub>2</sub> loss due to the newly introduced reactions. However, these reactions do not produce SOA precursors and thus the relative contributions to ISOP SOA are similar in all three experiments. The contributions to <inline-formula><mml:math id="M762" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA in NEW_slow from RO<sub>2</sub> <inline-formula><mml:math id="M764" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> and RO<sub>2</sub> <inline-formula><mml:math id="M767" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO are 72 % and 28 %, respectively.</p>
      <p id="d2e7988">The global distributions of <inline-formula><mml:math id="M768" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> from NEW_slow are shown in Fig. 3. The contribution from MTERP-RO<sub>2</sub> isomerization is generally spatially uniform over the land, with exceptions over highly polluted environments (e.g., Eastern China), where the isomerization pathway is of little importance (Fig. 3a). Its contribution maximizes in North Africa, tropical South America, and Australia, driven by high temperatures over these regions. The MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M772" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions contribute significantly (up to 40 %) over tropical forests, including the Amazon, Congo Basin, and Southeast Asia (Fig. 3b). These regions have strong MTERP emissions and thus high RO<sub>2</sub> concentrations, favoring RO<sub>2</sub> cross and self-reactions. In addition, for both ISOP-RO<sub>2</sub> and MTERP-RO<sub>2</sub>, reactions with NO dominate the RO<sub>2</sub> fate over terrestrial polluted regions with high NO emissions, accounting for more than 50 % of <inline-formula><mml:math id="M779" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> in the US, most of Eurasia, the Sahel and surrounding areas, and Southern Africa (Fig. 3d and g). In contrast, RO<sub>2</sub> <inline-formula><mml:math id="M782" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> reactions become more important in relatively clean regions, such as the tropical and boreal forests as well as the ocean (Fig. 3c and f). Spatial distributions of the annual mean surface MTERP-RO<sub>2</sub> and ISOP-RO<sub>2</sub> reaction rates are shown in Figs. S1 and S2, respectively.</p>

      <fig id="F3" specific-use="star"><label>Figure 3</label><caption><p id="d2e8150">Vertically integrated and annually averaged <inline-formula><mml:math id="M786" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> in % for MTERP-RO<sub>2</sub> reactions (panels <bold>a</bold>–<bold>e</bold>) and ISOP-RO<sub>2</sub> reactions (panels <bold>f</bold>–<bold>h</bold>) from NEW_slow. The sum of reactions for the same RO<sub>2</sub> (i.e., the sum of <bold>a</bold> to <bold>e</bold> and <bold>f</bold> to <bold>h</bold>, respectively) is equal to 100 %. Global mean <inline-formula><mml:math id="M791" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> weighted by gridded RO<sub>2</sub> concentrations are shown at the top right of each panel.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f03.jpg"/>

        </fig>

      <fig id="F4" specific-use="star"><label>Figure 4</label><caption><p id="d2e8255">Vertically integrated and annually averaged <inline-formula><mml:math id="M794" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA in % for MTERP-RO<sub>2</sub> reactions (panels <bold>a</bold>–<bold>d</bold>) and ISOP-RO<sub>2</sub> reactions (panel <bold>e</bold>–<bold>f</bold>) from NEW_slow. The sum of reactions for the same RO<sub>2</sub> (i.e., the sum of <bold>a</bold> to <bold>d</bold> and <bold>e</bold> to <bold>f</bold>, respectively) is equal to 100 %. Global mean <inline-formula><mml:math id="M798" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA are shown at the top right of each panel.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f04.jpg"/>

        </fig>

      <p id="d2e8332">Figure 4 shows the global distributions of <inline-formula><mml:math id="M799" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA in NEW_slow. Isomerization accounts for more than 40 % of MTERP SOA in the North Hemisphere and across land in the Southern Hemisphere (Fig. 4a). RO<sub>2</sub> <inline-formula><mml:math id="M801" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> reactions is another major pathway, contributing 20 %–40 % of MTERP SOA formation in the Northern Hemisphere and 30 %–60 % in the Southern Hemisphere (Fig. 4c). MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M804" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO contributes 20 %–40 % over the polluted regions in the Northern Hemisphere but less than 20 % elsewhere (Fig. 4d). The contribution from MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M806" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions is minor globally (Fig. 4b), due to the small SOA yields and the relatively slow reactions rates. We note that our findings differ from Mayhew et al. (2025) – who identify a critical contribution from the RO<sub>2</sub> <inline-formula><mml:math id="M809" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions to the SOA in tropical forest regions. The conservative SOA yields for this pathway applied in our simulations likely contribute to this discrepancy. Moreover, Mayhew et al. (2025) did not account for isomerization of terpene RO<sub>2</sub>, which may compete with the RO<sub>2</sub> <inline-formula><mml:math id="M813" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions, and they include the accretion reactions of a broader range of RO<sub>2</sub> species, including those of anthropogenic origin. The different treatments and results from various studies highlight the substantial uncertainties that remain in our understanding of RO<sub>2</sub> <inline-formula><mml:math id="M817" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions. For ISOP SOA, RO<sub>2</sub> <inline-formula><mml:math id="M820" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> is responsible for more than 60 % of SOA formation most of the globe, except in North America, Europe, and South and East Asia (Fig. 4e), where RO<sub>2</sub> <inline-formula><mml:math id="M823" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO contributes 40 %–60 % because of the high local NO emissions (Fig. 4f).</p>
      <p id="d2e8546">The newly added isomerization and RO<sub>2</sub> <inline-formula><mml:math id="M825" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions compete with the RO<sub>2</sub> <inline-formula><mml:math id="M828" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> and RO<sub>2</sub> <inline-formula><mml:math id="M831" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO reactions, leading to decreased MTERP SOA formation through the latter two pathways in the NEW experiments compared with BASE (Fig. 5a). At the same time, including isomerization increases MTERP SOA by more than 50 %, while the RO<sub>2</sub> <inline-formula><mml:math id="M833" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions account for additional 4 %–9 % increase. The isomerization pathway produces a large amount of low-volatility products and is thus more efficient in SOA formation than the RO<sub>2</sub> <inline-formula><mml:math id="M836" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> and RO<sub>2</sub> <inline-formula><mml:math id="M839" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO pathways. Therefore, compared to BASE, total MTERP SOA increases by 19 % (0.029 Tg) in NEW_fast and 30 % (0.046 Tg) in NEW_slow. The increase in NEW_slow is higher than that in NEW_fast, because RO<sub>2</sub> <inline-formula><mml:math id="M841" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> and RO<sub>2</sub> <inline-formula><mml:math id="M844" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO contribute more in NEW_slow due to slower RO<sub>2</sub> <inline-formula><mml:math id="M846" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reaction rates (Fig. 2a), and these two pathways form more SOA than the accretion reaction. The total MTERP SOA increases globally in the two NEW experiments compared to BASE, except over the Amazon and in Congo Forest in NEW_fast (Fig. 6a–c), where the RO<sub>2</sub> <inline-formula><mml:math id="M849" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions contribute substantially to the RO<sub>2</sub> fate. For ISOP SOA, the newly implemented reactions introduce extra losses of ISOP-RO<sub>2</sub> that compete with the RO<sub>2</sub> <inline-formula><mml:math id="M854" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> and RO<sub>2</sub> <inline-formula><mml:math id="M857" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO reactions but do not form SOA. As a result, the ISOP SOA decreases by 16 % in the two NEW experiments (0.038 Tg in NEW_fast and 0.037 Tg in NEW_slow) (Fig. 5b), and the decrease is globally consistent (Fig. 6d–f).</p>

      <fig id="F5" specific-use="star"><label>Figure 5</label><caption><p id="d2e8838">Percentage changes from BASE to NEW_fast and NEW_slow in the global burden of <bold>(a)</bold> MTERP <inline-formula><mml:math id="M858" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH SOA and <bold>(b)</bold> ISOP <inline-formula><mml:math id="M859" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH SOA. Different reactions are categorized by colors. Panel <bold>(c)</bold> shows the percentage change in the total BVOC <inline-formula><mml:math id="M860" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH SOA burden, with VOC precursors shown in shades of green. The percentages are calculated with respect to BASE. Black dots in all three panels are global total changes.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f05.png"/>

        </fig>

      <fig id="F6" specific-use="star"><label>Figure 6</label><caption><p id="d2e8880">Global distributions of SOA column concentrations from BASE (left panel), and the differences between NEW_fast and BASE (middle panel), as well as between NEW_slow and BASE (right panel). Top, middle, and bottom panels show results for SOA burden from MTERP <inline-formula><mml:math id="M861" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH, ISOP <inline-formula><mml:math id="M862" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH, and Total SOA burden from OH oxidation. Dotted regions on the middle and right panels are where the changes are significant to the 0.05 levels, based on Welch's <inline-formula><mml:math id="M863" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>-test using yearly annual means from the 10-year experiments. Global average changes in burden are shown above each panel.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f06.jpg"/>

        </fig>

      <p id="d2e8910">The increase in MTERP SOA compensates for the ISOP SOA decrease (Fig. 5c). As a result, even though the RO<sub>2</sub> chemistry and SOA contribution are significantly altered (Fig. 2), total biogenic SOA in the two NEW experiments is similar to that in BASE (<inline-formula><mml:math id="M865" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> % difference). Globally, the NEW experiments predict a decrease from BASE over the tropical forest regions (Fig. 6g–i), which is dominated by ISOP SOA (Fig. 6d–f), and an increase over the rest of the world due to changes in MTERP SOA (Fig. 6a–c). We note that these results are based on our choices of SOA yields, reaction rates, and branching ratios from various laboratory studies. The measurements from different laboratory studies can vary widely, indicating large uncertainties associated with these results. Moreover, a recent study suggests that previous chamber experiments used to inform SOA yields do not fully represent atmospheric RO<sub>2</sub> fates (Kenagy et al., 2024). Furthermore, Goss et al. (2025) suggest that the reaction conditions and RO<sub>2</sub> fate in many experiments are dynamic and may differ from previous interpretations. In particular, they infer that isomerization was an important RO<sub>2</sub> pathway for previous experiments under low-NO<sub><italic>x</italic></sub> conditions used to estimate VBS yields for the RO<sub>2</sub> <inline-formula><mml:math id="M871" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> pathway. This suggests that some isomerization may have already been included in the RO<sub>2</sub> <inline-formula><mml:math id="M874" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> pathway yields, and our newly implemented isomerization pathway may double count these contributions. Overall, these large uncertainties highlight the urgent need to better constrain parameters related to SOA formation in the laboratory.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Changes in SOA formation from PI to F</title>
      <p id="d2e9028">Biogenic SOA formation is impacted by biogenic VOC emissions, anthropogenic emissions, and temperature. These factors vary globally over time and thus the biogenic SOA formation can be different from the past to the future. In this section, we examine the RO<sub>2</sub> fate and biogenic SOA formation in PI (1850), PD (2010), and F (2100 following SSP5).</p>
      <p id="d2e9040">Global mean CO<sub>2</sub> mixing ratios in our simulations are 284, 389, and 1135 ppm in PI, PD, and F, respectively. In response to the elevated global CO<sub>2</sub> levels, global mean surface temperature increases by 0.9 K from PI to PD and 5.9 K from PD to F (Fig. 7a and b). The temperature increase is more severe over the Arctic than the rest of the world, which is known as Arctic amplification. The NO emissions increase by 86.7 Tg yr<sup>−1</sup> from PI to PD (78 % as compared to PD; all the percentage changes in this section are reported as compared to PD hereafter) and decrease by 37.2 Tg yr<sup>−1</sup> (34 %) from PD to F (Fig. 7c and d). The changes in NO emissions are dominated by changes in anthropogenic emissions. However, North Africa exhibits decreases in NO emissions from PI to PD and increases from PD to F, driven by changes in biomass burning emissions. From PI to PD, global MTERP emissions decrease slightly by 7.9 Tg yr<sup>−1</sup> (6 %) (Fig. 7e), due to the compensating effects of deforestation and global warming. In contrast, global ISOP emission decrease more substantially (85.3 Tg yr<sup>−1</sup>; 22 %) (Fig. 7g), because the ISOP emissions are further inhibited by increases in CO<sub>2</sub>. BVOC emissions decrease over regions with strong deforestation, including Eastern US, South and East Asia, South America, and Central Africa except the Congo Forest, while the temperature-driven emission increase occurs over the areas with none or little deforestation (e.g., the center of the Amazon forest). The increase over France and Central Europe is related to a local reforestation from PI to PD. In the Congo forest and Southern Africa, MTERP emissions increase over this region in response to temperature increases, while ISOP emissions decrease due to the dominating effect of CO<sub>2</sub> inhibition and deforestation. From PD to F, the steep temperature increase in the SSP5 projection results in strong BVOC emission increases – 177.6 Tg yr<sup>−1</sup> (139 %) for MTERP emission and 129.3 Tg yr<sup>−1</sup> (33 %) for ISOP emission (Fig. 7f and h). The MTERP emissions increase globally despite the impact of the moderate deforestation from PD to F, while localized ISOP emission decreases occur over the US, Central Africa, Brazil, and Argentina due to the deforestation and CO<sub>2</sub> inhibition. We note large uncertainties remain in modeling BVOC emissions (Cao et al., 2021; Guenther et al., 2012), and the predicted changes between different climate conditions may vary depending on whether/how changing vegetation is represented (e.g. Jo et al., 2023). The oxidant levels also vary in response to the changes in NO and VOC emissions (Fig. 8). From PI to PD, the surface concentrations of HO<sub><italic>x</italic></sub> (i.e., OH and HO<sub>2</sub>) generally increase, primarily due to NO emission increase (Fig. 8a and c). However, in regions characterized by increased NO and decreased VOC emissions (e.g., East US, Europe, and East Asia), the OH-to-HO<sub>2</sub> ratio increases from PI to PD, leading to a reduction in HO<sub>2</sub> concentrations and thus decreasing the RO<sub>2</sub> <inline-formula><mml:math id="M893" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> fate over these regions. From PD to F, the NO emission decrease and the substantial increase in VOC emissions reduces the OH-to-HO<sub>2</sub> ratio. As a result, OH (HO<sub>2</sub>) surface concentrations generally decrease (increase) over land (Fig. 8b and d). The decrease in OH decreases total OH-initiated SOA formation, while the HO<sub>2</sub> increase contributes to a higher RO<sub>2</sub> <inline-formula><mml:math id="M899" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> fate. The oxidant changes aloft are in general consistent with the surface changes (not shown), except that HO<sub>2</sub> increases slightly over the polluted regions from PI to PD. The oxidant changes can also be impacted by changes in VOC emissions from anthropogenic and biomass burning sources (Fig. S3). The trends in anthropogenic VOC emissions are generally opposite to the changes in BVOC emissions, likely counteracting some of the impacts of BVOC emissions on oxidant changes. Other than the abovementioned factors, the emissions of primary organic aerosols increase from PI to PD and decrease from PD to F (not shown), which can impact gas-particle partitioning accordingly.</p>

      <fig id="F7" specific-use="star"><label>Figure 7</label><caption><p id="d2e9288">Global distributions of changes in surface temperatures (first row), NO emissions (second row), MTERP emissions (third row), and ISOP emissions (fourth row) from PI to PD (left column) and PD to F (right column). Global average changes in temperatures and global total changes in emissions are shown above each panel.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f07.jpg"/>

        </fig>

      <fig id="F8" specific-use="star"><label>Figure 8</label><caption><p id="d2e9300">Global distributions of percentage changes in surface concentrations of OH (top row) and HO<sub>2</sub> (bottom row) from PI to PD (left column) and from PD to F (right column). All percentage changes are calculated with respect to PD levels.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f08.jpg"/>

        </fig>

      <p id="d2e9318">The <inline-formula><mml:math id="M903" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> and <inline-formula><mml:math id="M905" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA for MTERP-RO<sub>2</sub> and ISOP-RO<sub>2</sub> in PI, PD, and F are shown in Fig. 9. Since NO emissions peak in PD, <inline-formula><mml:math id="M908" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">ISOP</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mi mathvariant="normal">MTERP</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M909" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO contributes the most to <inline-formula><mml:math id="M910" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> and <inline-formula><mml:math id="M912" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA in this period compared to PI and F. Isomerization consistently dominates the MTERP-RO<sub>2</sub> fate in its branch under all climate conditions – accounting for 19 % in PI and PD, and slightly higher in F with 20 % due to the extreme warming that further accelerates this pathway in F (Fig. 9a). Its contribution to total MTERP SOA is substantial and increases from 38 % in PI to 44 % in PD and further to 51 % in F (Fig. 9b), highlighting the critical role of MTERP isomerization to SOA formation across all climate conditions. The isomerization <inline-formula><mml:math id="M914" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>SOA increases from PI to PD and to F reflect not only the <inline-formula><mml:math id="M915" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub>, but also how SOA volatility responds to temperature changes (i.e. the gas-phase is favored under higher temperatures for more semi-volatile SOA), which favors the contribution from isomerization. It is noted that the simplified representation of the isomerization process may overpredict SOA formed through this pathway under high-NO<sub><italic>x</italic></sub> conditions (see Sect. 2.2 for details). Since the NO emissions peak in PD (Fig. 7c and d), this high bias is likely to be more significant in PD than in PI and F, which may impact the continuous increasing trend in isomerization SOA contribution from PI to F and would further reduce the minimum predicted SOA in PD (see Fig. 10a and the discussion below). In addition, our results may be oversensitive to volatility, due to the absence of aqueous phase isoprene SOA formation pathways.</p>

      <fig id="F9" specific-use="star"><label>Figure 9</label><caption><p id="d2e9463">Same as Fig. 2, except that results are shown for PI, PD, and F climate conditions. All the experiments follow the same RO<sub>2</sub> chemistry as in NEW_slow.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f09.png"/>

        </fig>

      <p id="d2e9481">From PI to PD, the MTERP and ISOP SOA burden decreases by 23 % (0.045 Tg) and 59 % (0.117 Tg), respectively (Fig. 10a and b). The global distributions of SOA burden changes generally follow the changes in BVOC emissions (Figs. 11, 7e, and g), except for the RO<sub>2</sub> <inline-formula><mml:math id="M920" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO pathway. The changes in SOA formed through the MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M922" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO pathway are associated with changes in NO emissions (Figs. 11d and 7c), driven by the influence of NO on both RO<sub>2</sub> chemistry (Fig. 9a) and OH concentrations (Fig. 8a). The impacts of NO emission changes on SOA formed through ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M925" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO is also evident over the west coast of the US, East Asia, and Southeast Asia, despite the strong ISOP emission decrease (Fig. 11f). The decrease in MTERP and ISOP SOA burden are both dominated by the reduction in the RO<sub>2</sub> <inline-formula><mml:math id="M927" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> pathway (Fig. 10a and b), which is caused by VOC emission decreases (Fig. 7e and g) and higher NO fate in PD (Fig. 9a and c). The shift in RO<sub>2</sub> fate from RO<sub>2</sub> <inline-formula><mml:math id="M931" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> to RO<sub>2</sub> <inline-formula><mml:math id="M934" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO reduces SOA formed through bimolecular reactions, since the products from the latter pathway are more volatile. In addition, the overall SOA decrease results in less condensation, which further decreases SOA burden. As a result, the decrease in SOA burden is stronger than that in the corresponding VOC emissions.</p>

      <fig id="F10" specific-use="star"><label>Figure 10</label><caption><p id="d2e9620">Same as Fig. 5, except showing historical and future changes in SOA burden. All the percentages are calculated with respect to PD.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f10.png"/>

        </fig>

      <fig id="F11" specific-use="star"><label>Figure 11</label><caption><p id="d2e9632">Changes in annual mean SOA column concentrations from PI to PD, calculated as PD minus PI, through <bold>(a)</bold> MTERP-RO<sub>2</sub> isomerization, <bold>(b)</bold> MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M937" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub>, <bold>(c)</bold> MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M940" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub>, <bold>(d)</bold> MTERP-RO<sub>2</sub> <inline-formula><mml:math id="M943" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO, <bold>(e)</bold> ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M945" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub>, <bold>(f)</bold> ISOP-RO<sub>2</sub> <inline-formula><mml:math id="M948" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO reaction pathways. Dotted regions are where the changes are significant to the 0.05 levels, based on Welch's <inline-formula><mml:math id="M949" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>-test using yearly annual means from the 10-year experiments. Global changes in total burden are shown above each panel.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f11.jpg"/>

        </fig>

      <p id="d2e9785">From PD to F, the substantial increase in MTERP emissions enhances SOA formation via all RO<sub>2</sub> pathways globally (Figs. 7f, 10a, and 12a–d). This increase in SOA promotes additional condensation, which in turn further amplifies SOA production. However, the warming in F tends to push the gas-particle partitioning towards gas phase and reduces the condensation of precursor gases, partly offsetting the SOA increase. We note that the assumed <inline-formula><mml:math id="M951" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>H<sub>vap</sub> values in CAM6-Chem lead to strong evaporation in response to temperature increase. If a smaller <inline-formula><mml:math id="M953" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>H<sub>vap</sub> were used, the overall increase in SOA would be greater due to weaker changes in gas-particle partitioning. Overall, the MTERP SOA burden increases by 205 % (0.403 Tg) (Fig. 10a). Isomerization is the dominant contributor to this increase, because the low volatility products it forms are less prone to evaporation under increasing temperature. However, the increase from isomerization may be slightly overpredicted due to turning off the photolysis of SOA from the lowest volatility bin (see also Sect. S1). Indeed, we notice that the MTERP SOA lifetime due to photolytic loss is longer in F than PD (Table S1), likely because a large fraction of MTERP SOA is formed through isomerization in F but not photolyzed. The increase in SOA formed through the isomerization pathway may also be related to the favoring of this pathway under the extreme warming in SSP5. However, such impact is likely limited, since isomerization is already nearly saturated in PD and the <inline-formula><mml:math id="M955" display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula>RO<sub>2</sub> increase from PD to F is minor (Fig. 9a). The total ISOP SOA increases by 19 % (0.037 Tg) from PD to F (Fig. 10b). This is dominated by the increase in SOA formed through the RO<sub>2</sub> <inline-formula><mml:math id="M958" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> pathway (Fig. 12e), which is driven by ISOP emission increases (Fig. 7h) and a shift in RO<sub>2</sub> fate from the RO<sub>2</sub> <inline-formula><mml:math id="M962" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO pathway toward the RO<sub>2</sub> <inline-formula><mml:math id="M964" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> pathway (Fig. 9c) due to reductions in NO emissions and increases in HO<sub>2</sub> concentrations from PD to F (Figs. 7d and 8d). Wet removal is another critical factor that can impact the evolution of SOA burden. We find that SOA lifetime due to wet deposition varies from PI to F, contributing, in particular, to the simulated burden decrease from PI to PD (Table S1).</p>

      <fig id="F12" specific-use="star"><label>Figure 12</label><caption><p id="d2e9933">Same as Fig. 11, except for changes from PD to F, calculated as F minus PD.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/26/15853/2026/acp-26-15853-2026-f12.png"/>

        </fig>

      <p id="d2e9942">Overall, the total BVOC SOA decreases by 41 % (0.162 Tg) from PI to PD, mainly due to reductions in ISOP SOA (Fig. 10c). In contrast, from PD to F, it increases by 112 % (0.440 Tg), primarily due to enhanced MTERP SOA. These changes are largely driven by changes in BVOC emissions, with contributions from changes in wet removal, RO<sub>2</sub> chemical fate, and gas-particle partitioning. Also, the PD-to-F changes largely depend on the selected future scenario. Using an alternative scenario with different NO emissions, temperature, and/or CO<sub>2</sub> level can lead to substantially different results.</p>
      <p id="d2e9963">To further isolate how the chemistry is perturbed in different climate conditions, we compare PD with PI_PDB and F_PDB (Fig. 10) – these two experiments are the same as PI and F, respectively, but have VOC emissions fixed at the PD level (see details in Sect. 2.4). When removing the impacts of BVOC emission changes, MTERP SOA from isomerization increases from both PI_PDB to PD and PD to F_PDB, reflecting the acceleration of MTERP-RO<sub>2</sub> isomerization with increasing temperatures. In contrast, the SOA formed through bimolecular reactions declines continuously from the past to the present and the future. The decrease from PI_PDB to PD is mainly due to the decreased SOA formation through the RO<sub>2</sub> <inline-formula><mml:math id="M971" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> HO<sub>2</sub> pathway as a result of the shift of RO<sub>2</sub> fate under higher NO emissions in PD, while the reduction from PD to F_PDB results from stronger warming that shifts gas-particle partitioning toward the gas phase. Overall, about half of the simulated decrease in total biogenic SOA from PI to PD is due to chemistry, thermodynamics, and wet deposition (24 % from PI_PDB to PD compared to 41 % from PI to PD; Fig. 10c and Table S1). Chemical and thermodynamics factors lead to a moderate decrease (14 %) from PD to F_PDB (Fig. 10c); this effect is overwhelmed by the increase in BVOC emissions from PD to F.</p>
</sec>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <label>4</label><title>Conclusions</title>
      <p id="d2e10018">In this study, we expand the biogenic SOA formation mechanism in CESM2.2 based on the latest understanding of RO<sub>2</sub> chemistry. Specifically, we implement the isomerization and RO<sub>2</sub> <inline-formula><mml:math id="M976" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reaction pathways for monoterpene SOA formation and add isoprene product reactions included in MOZART but absent from the standard VBS. Both fast and slow RO<sub>2</sub> <inline-formula><mml:math id="M979" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reaction rates combinations are tested.</p>
      <p id="d2e10081">We find that MTERP isomerization plays a critical role in SOA formation. The RO<sub>2</sub> branch capable of isomerization is nearly saturated due to its fast reaction rate and this pathway contributes almost half of MTERP SOA formation by producing large amounts of low-volatility products. The RO<sub>2</sub> <inline-formula><mml:math id="M983" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions contribute moderately to the MTERP RO<sub>2</sub> fate but make a minor contribution to the MTERP SOA formation. However, we note that the SOA contribution from RO<sub>2</sub> <inline-formula><mml:math id="M987" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions is likely underestimated, due to the low and fixed yields applied to the reactions along with the absence of SOA formation from non-accretion products. The updated RO<sub>2</sub> chemistry increases MTERP SOA by 19 %–30 % compared with the baseline configuration, mainly due to the isomerization pathway. In addition, because of extra RO<sub>2</sub> loss introduced by the newly implemented reactions, the ISOP SOA decreases by 16 %. The increase in MTERP SOA and the decrease in ISOP SOA compensate for each other. As a result, the total biogenic SOA burden is similar in the baseline and new configurations, despite the substantial changes in RO<sub>2</sub> chemistry and SOA formation pathways.</p>
      <p id="d2e10180">With the new chemistry, we investigate how the RO<sub>2</sub> fate and the SOA formation varies from the past to the present and the future. We find that for MTERP, the isomerization pathway is nearly saturated under all climate conditions, with a higher contribution in F because of the extreme global warming that further accelerates this pathway. The contribution from the RO<sub>2</sub> <inline-formula><mml:math id="M994" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> NO pathway to both the RO<sub>2</sub> fate and SOA formation peaks in PD, due to higher NO emissions in PD than PI and F. The total biogenic SOA decreases by nearly half from PI to PD and is doubled from PD to F. The changes in SOA are dominated by changes in BVOC emissions, with contributions from shifts in RO<sub>2</sub> chemical fate and gas-particle partitioning playing a more important role in the changes from PI to PD.</p>
      <p id="d2e10226">We simulate large changes in the fate of biogenic RO<sub>2</sub> and SOA burden from the past to the future. RO<sub>2</sub> chemistry plays an important role in determining SOA formation but is still subject to substantial uncertainties. To improve the representation of SOA in 3D models and better quantify their climate impacts, more laboratory studies are needed to constrain the uncertainties on the reaction rates and SOA yields for isomerization and RO<sub>2</sub> <inline-formula><mml:math id="M1000" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> RO<sub>2</sub> reactions as well as the isomerization branching ratio. Additional work is needed to translate laboratory SOA yields into model parameterizations that balance chemical complexity with computational efficiency.</p>
</sec>

      
      </body>
    <back><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d2e10277">This work is based on CESM2.2 (<uri>https://github.com/ESCOMP/CESM/releases/tag/release-cesm2.2.2</uri>, NCAR, 2023). The modified chemical mechanisms and the data shown in the figures are available on Zenodo (<ext-link xlink:href="https://doi.org/10.5281/zenodo.21877569" ext-link-type="DOI">10.5281/zenodo.21877569</ext-link>, Shi et al., 2026).</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d2e10286">The supplement related to this article is available online at <inline-supplementary-material xlink:href="https://doi.org/10.5194/acp-26-15853-2026-supplement" xlink:title="pdf">https://doi.org/10.5194/acp-26-15853-2026-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d2e10295">YS, CLH, and JHK formulated the overarching research goals and aims. YS and CLH designed the methodology. YS developed the model code, performed the simulations, analyzed the results, and created the figures. YS and CLH wrote the initial draft of this paper. All authors reviewed this paper.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d2e10301">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d2e10307">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. The authors bear the ultimate responsibility for providing appropriate place names. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.</p>
  </notes><ack><title>Acknowledgements</title><p id="d2e10313">We acknowledge high-performance computing support from the Derecho system (Computational and Information Systems Laboratory, 2023) provided by the NSF National Center for Atmospheric Research (NCAR), sponsored by the National Science Foundation.  PNNL is operated for DOE by the Battelle Memorial Institute under contract no. DE-AC06-76RLO1830.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d2e10318">This work was supported by the U.S. Department of Energy (DE-SC0022017) grant to CLH and JHK at MIT. YS also acknowledges the support of Linus Pauling Distinguished Postdoctoral Fellowship program (Proposal Scope 86140) through the Laboratory Directed Research and Development Program at Pacific Northwest National Laboratory (PNNL).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d2e10324">This paper was edited by Stefania Gilardoni and reviewed by four anonymous referees.</p>
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