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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-25-17159-2025</article-id><title-group><article-title>German methane fluxes estimated top-down  using ICON–ART – Part 1: Ensemble-enhanced   scaling inversion</article-title><alt-title>German methane fluxes estimated top-down using ICON–ART – Part 1</alt-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Bruch</surname><given-names>Valentin</given-names></name>
          <email>valentin.bruch@dwd.de</email>
        <ext-link>https://orcid.org/0000-0001-5562-9285</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Rösch</surname><given-names>Thomas</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Jiménez de la Cuesta Otero</surname><given-names>Diego</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-0364-8182</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Ellerhoff</surname><given-names>Beatrice</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Mamtimin</surname><given-names>Buhalqem</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Becker</surname><given-names>Niklas</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-8077-430X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Blechschmidt</surname><given-names>Anne-Marlene</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Förstner</surname><given-names>Jochen</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7989-462X</ext-link></contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Kaiser-Weiss</surname><given-names>Andrea K.</given-names></name>
          <email>andrea.kaiser-weiss@dwd.de</email>
        </contrib>
        <aff id="aff1"><label>1</label><institution>Deutscher Wetterdienst, Frankfurter Str. 135, 63067 Offenbach, Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Valentin Bruch (valentin.bruch@dwd.de) and Andrea K. Kaiser-Weiss (andrea.kaiser-weiss@dwd.de)</corresp></author-notes><pub-date><day>1</day><month>December</month><year>2025</year></pub-date>
      
      <volume>25</volume>
      <issue>23</issue>
      <fpage>17159</fpage><lpage>17185</lpage>
      <history>
        <date date-type="received"><day>27</day><month>March</month><year>2025</year></date>
           <date date-type="accepted"><day>5</day><month>November</month><year>2025</year></date>
           <date date-type="rev-recd"><day>24</day><month>October</month><year>2025</year></date>
           <date date-type="rev-request"><day>15</day><month>May</month><year>2025</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2025 Valentin Bruch et al.</copyright-statement>
        <copyright-year>2025</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025.html">This article is available from https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d2e157">This two-part study explores the quantification of greenhouse gas emissions using atmospheric observations in order to validate national emission inventories. Inverse methods can support emission quantification at the national scale based on observations and atmospheric transport simulations, yet, they are often limited by the observation coverage, transport model uncertainties, and inversion methodologies. Here, we introduce a system for regional estimation of methane fluxes and apply this to Central Europe with a focus on Germany, where we distinguish emissions from different anthropogenic sectors. We evaluate the robustness of the method using sensitivity tests with in-situ observations from the Integrated Carbon Observation System (ICOS). Using synthetic observation experiments, we estimate the impact of transport errors on the flux estimates. The atmospheric transport is calculated employing the numerical weather prediction model ICON with its module ART at 6.5 km resolution, sampling the meteorological uncertainty with a 12-member transport ensemble. The same transport ensemble is used to generate pseudo-observations with a simulated transport uncertainty. Posterior fluxes are estimated with a synthesis inversion method for three different approximations of the model–observation error covariance matrix. We find that using ensemble-estimated transport uncertainties can significantly reduce the random error of emission estimates. Our results highlight the importance of analyzing biases in flux inversions for reliable, observation-based emission estimates.</p>
  </abstract>
    
<funding-group>
<award-group id="gs1">
<funding-source>Bundesministerium für Bildung und Forschung</funding-source>
<award-id>01LK2102B</award-id>
<award-id>01LK2104A</award-id>
</award-group>
</funding-group>
</article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d2e169">Quantifying greenhouse gas (GHG) emissions is essential for effective mitigation of anthropogenic climate change. Atmospheric GHG inversions provide such quantification by connecting the observed atmospheric composition to surface fluxes using transport models. This so-called “top-down” approach is complementary to “bottom-up” emission estimates, which are based on activity data and emission factors <xref ref-type="bibr" rid="bib1.bibx21" id="paren.1"/>. Top-down emission estimates can be used to validate national bottom-up GHG inventories reported to the United Nations Framework Convention on Climate Change (UNFCCC) <xref ref-type="bibr" rid="bib1.bibx30 bib1.bibx31 bib1.bibx18" id="paren.2"/>. Such national-scale estimates are typically limited by the observation coverage <xref ref-type="bibr" rid="bib1.bibx35" id="paren.3"/> and uncertainties in atmospheric transport modeling <xref ref-type="bibr" rid="bib1.bibx15" id="paren.4"/>. This motivates estimating methane emissions in the comparably well-observed Central Europe using a high-resolution transport model and applying methods from numerical weather prediction (NWP) to estimate the transport uncertainty.</p>
      <p id="d2e184">Regional top-down estimates of long-lived GHG can be based on different types of transport models. Lagrangian models calculate trajectories from selected locations by moving with air parcels transported by the wind. They have been widely used for inversions of trace gases like halocarbons, nitrous oxide and methane (<inline-formula><mml:math id="M1" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) in European regions, see e.g., <xref ref-type="bibr" rid="bib1.bibx46" id="text.5"/>, <xref ref-type="bibr" rid="bib1.bibx14" id="text.6"/>, <xref ref-type="bibr" rid="bib1.bibx18" id="text.7"/>. In contrast, Eulerian models – such as ICON–ART – continuously transport trace gas concentrations through three-dimensional grid boxes. Although they are computationally more expensive for cases where a relatively small number of trajectories would suffice, they become superior when the amount of data grows and, as <xref ref-type="bibr" rid="bib1.bibx12" id="text.8"/> pointed out, open the road for data assimilation methods as used in NWP. Among the Eulerian models, also NWP models have been used for regional flux inversions of <inline-formula><mml:math id="M2" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx27" id="paren.9"/> and <inline-formula><mml:math id="M3" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx45" id="paren.10"/>. Regardless whether Lagrangian or Eulerian or even combined approaches <xref ref-type="bibr" rid="bib1.bibx38" id="paren.11"/> are applied, the top-down estimation requires solving an inverse problem <xref ref-type="bibr" rid="bib1.bibx13" id="paren.12"/>. Eulerian transport model based inversions may employ emission ensembles, as in <xref ref-type="bibr" rid="bib1.bibx45" id="text.13"/> with a localized Kalman filter, and other data assimilation methods <xref ref-type="bibr" rid="bib1.bibx32" id="paren.14"><named-content content-type="pre">see, e.g.,</named-content></xref>. Alternatively, the method of synthesis inversion scales a set of a priori emission categories <xref ref-type="bibr" rid="bib1.bibx23" id="paren.15"/>.</p>
      <p id="d2e257">In this work, we introduce a system for national-scale top-down estimation of <inline-formula><mml:math id="M4" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emissions based on modeling experience from NWP. We analyze the benefit of constraining the transport uncertainty using a meteorological ensemble as proposed by <xref ref-type="bibr" rid="bib1.bibx16" id="text.16"/> and <xref ref-type="bibr" rid="bib1.bibx44" id="text.17"/>. A synthesis inversion method is used to estimate emissions with a focus on Germany based on high-resolution a priori emissions from national reporting and in situ observations of atmospheric <inline-formula><mml:math id="M5" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations.</p>
      <p id="d2e288">In the present Part 1 of this two-part study, we describe our new inversion system and evaluate its performance. Section <xref ref-type="sec" rid="Ch1.S2"/> introduces the method with a detailed description of the uncertainty estimation. The description of the inversion system is completed by the input data described in Sect. <xref ref-type="sec" rid="Ch1.S3"/>. In Sect. <xref ref-type="sec" rid="Ch1.S4"/>, we analyze the performance using synthetic observation experiments and test the sensitivity to tuning parameters with real observations. We conclude in Sect. <xref ref-type="sec" rid="Ch1.S5"/> and refer to Part 2 <xref ref-type="bibr" rid="bib1.bibx6" id="paren.18"/> for a discussion of the emission estimates obtained using real observations.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Method</title>
      <p id="d2e310">We use a synthesis inversion method <xref ref-type="bibr" rid="bib1.bibx23" id="paren.19"/> that scales the <inline-formula><mml:math id="M6" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes to optimize the agreement of model predictions and observations. In this method, the fluxes are initially grouped into a manageable set of flux categories. Here, these are 46 categories that subdivide the fluxes by region and emission sector. With the Eulerian transport model, the concentration from each flux category is calculated separately at all grid cells and time points. At the location and time of the observations, the model writes out the predicted concentrations from the flux category contributions and their sum is compared to the observed concentration. The inversion then minimizes the mismatch between model prediction and observations by scaling each of the flux categories by one number – the scaling factor – making use of the linear relation between fluxes and concentrations in the atmosphere. Thus, the inversion result consists of one scaling factor for each flux category. By multiplying the a priori fluxes with the scaling factors we obtain the a posteriori fluxes. This scaling method cannot provide a correction where a priori fluxes are zero <xref ref-type="bibr" rid="bib1.bibx24" id="paren.20"/>. However, this is less of a problem for <inline-formula><mml:math id="M7" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, as inventories can collect where methane-emitting activities are normally located, but emission factors which translate the activities into bottom-up emissions are uncertain <xref ref-type="bibr" rid="bib1.bibx11" id="paren.21"/>.</p>
      <p id="d2e344">The described method relies on high quality model predictions as well as accurate concentration observations. To match these requirements, we have carefully chosen the configuration of the transport model (Sect. <xref ref-type="sec" rid="Ch1.S2.SS1"/>) and consider the specific difficulties in modeling strong plumes (Sect. <xref ref-type="sec" rid="Ch1.S2.SS2"/>). Selected observational data are employed to remedy model boundary effects and therefore improve the overall model predictions (Sect. <xref ref-type="sec" rid="Ch1.S2.SS3"/>). In Sect. <xref ref-type="sec" rid="Ch1.S2.SS4"/>, we introduce the Bayesian inversion framework. To assess whether deviations between model and observations contain information on the fluxes, we estimate the model uncertainty and error correlations. We compare three different methods for estimating these uncertainties and correlations (Sects. <xref ref-type="sec" rid="Ch1.S2.SS5"/> and <xref ref-type="sec" rid="Ch1.S2.SS6"/>). Furthermore, we define the time window and a priori uncertainties of the inversion (Sect. <xref ref-type="sec" rid="Ch1.S2.SS7"/> and <xref ref-type="sec" rid="Ch1.S2.SS8"/>). A summary of the method and data streams will be provided in Sect. <xref ref-type="sec" rid="Ch1.S3.SS5"/>.</p>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Transport simulation</title>
<sec id="Ch1.S2.SS1.SSS1">
  <label>2.1.1</label><title>Transport model</title>
      <p id="d2e380">The atmospheric transport is simulated using the NWP model ICON <xref ref-type="bibr" rid="bib1.bibx54" id="paren.22"/> in a configuration close to operational NWP at Germany's Meteorological Service (DWD), extended with the module for Aerosol and Reactive Trace gases (ART) <xref ref-type="bibr" rid="bib1.bibx37 bib1.bibx41" id="paren.23"/>. The model is run in limited area mode for a domain covering large parts of the European continent (latitudes 34 to 70° N, longitudes 21° W to 59° E, see Fig. <xref ref-type="fig" rid="F1"/>) with a horizontal resolution of <inline-formula><mml:math id="M8" display="inline"><mml:mn mathvariant="normal">6.5</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M9" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> (ICON grid R3B8) and 74 vertical levels up to a maximal height of <inline-formula><mml:math id="M10" display="inline"><mml:mn mathvariant="normal">22.77</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M11" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula>. The ICON model simulates the meteorology and the tracer transport. Re-initialization of the meteorological fields every <inline-formula><mml:math id="M12" display="inline"><mml:mn mathvariant="normal">24</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M13" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula> with operationally produced analysis fields ensures that the meteorology stays close to reality. The surface <inline-formula><mml:math id="M14" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes are provided to the transport model using the online emission module <xref ref-type="bibr" rid="bib1.bibx22 bib1.bibx45" id="paren.24"/>. We do not simulate any chemical reactions, because the typical lifetime of <inline-formula><mml:math id="M15" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in the atmosphere is much longer than the time that an air parcel typically spends in our modeling domain.</p>

      <fig id="F1" specific-use="star"><label>Figure 1</label><caption><p id="d2e465">Model domain, colored to distinguish 35 patches defining regional flux categories. Observation sites (dots) are colored by the choice of model equivalent height (see Table <xref ref-type="table" rid="TC1a"/>). Dark blue at the domain boundary indicates regions for which emissions are not categorized and therefore not modified in the inversion. Other colors only distinguish neighboring patches. In white hatched regions, natural fluxes are also categorized and scaled. A white ellipse marks the Upper Silesian Coal Basin, in which fugitive emissions define their own flux category. In Germany, the map shows the six regions used for the agricultural sector. For other sectors in Germany, we use four regions: south (yellow and light green), west (dark blue), north (light green), and east (dark green and yellow).</p></caption>
            <graphic xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025-f01.png"/>

          </fig>

      <p id="d2e476">For long living tracers like methane, the correct treatment of the lateral boundary concentrations is of importance. Therefore, we extended the model by implementing lateral boundary nudging for ART tracers in order to obtain smooth fields and avoid strong spatial gradients. The nudging is limited to a boundary zone of width <inline-formula><mml:math id="M16" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">250</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M17" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula>. Further, so-called meteogram output has been implemented for ART tracers, providing model output in the vicinity of observation locations with high temporal resolution.</p>
</sec>
<sec id="Ch1.S2.SS1.SSS2">
  <label>2.1.2</label><title>Meteorological ensemble</title>
      <p id="d2e505">For improved uncertainty estimates, we run a meteorological ensemble of 12 members. Each ensemble member uses different meteorological initial and lateral boundary conditions from the operational ensemble data assimilation used for global NWP at DWD <xref ref-type="bibr" rid="bib1.bibx40 bib1.bibx36" id="paren.25"/>. Since our meteorological input fields and the transport model setup are taken from operational NWP at DWD, the ensemble provides a reasonable estimate for the meteorological uncertainty in our model, including uncertainties in the simulated wind field and atmospheric stability.</p>
      <p id="d2e511">In the following, we distinguish a so-called deterministic model run providing the best estimate of the modeled <inline-formula><mml:math id="M18" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration, and the ensemble runs providing 12 different <inline-formula><mml:math id="M19" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations to estimate the uncertainty. The ensemble will only be used to estimate model uncertainties and error covariances (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS5"/>), and to generate pseudo-observations (Sect. <xref ref-type="sec" rid="Ch1.S3.SS4"/>).</p>
</sec>
<sec id="Ch1.S2.SS1.SSS3">
  <label>2.1.3</label><title>Definition of flux categories</title>
      <p id="d2e548">Estimating <inline-formula><mml:math id="M20" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes in <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> grid cells based on 50 observation sites seems impossible without reducing the number of degrees of freedom of the fluxes. Here, we reduce the degrees of freedom drastically by parametrizing the fluxes using only 46 basis vectors. A basis vector in this parametrization is a flux category that contains all fluxes from one region, possibly limited to specific emission sectors. For example, we define all anthropogenic emissions from Denmark as one flux category. We thereby assume that the distribution of anthropogenic emissions within Denmark is correct in the a priori and only allow the inversion to adjust the total emissions from Denmark.</p>
      <p id="d2e575">We define the flux categories with the primary aim of providing an accurate estimate of emissions from Germany, resolving federated states where possible, to address the requirements of potential stakeholders. When distinguishing emission sectors, we stay close to the national reporting by using definitions from the gridded aggregated nomenclature for reporting <xref ref-type="bibr" rid="bib1.bibx51" id="paren.26"><named-content content-type="pre">GNFR,</named-content></xref>. For the agricultural sector (GNFR sectors K+L), which contributes roughly two thirds of all German <inline-formula><mml:math id="M22" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emissions, we distinguish six regions within Germany as depicted in Fig. <xref ref-type="fig" rid="F1"/>. For the sum of all other sectors – excluding natural and LULUCF fluxes – we distinguish four regions, i.e., the federated states south: Baden-Wuerttemberg and Bavaria, west: North Rhine-Westphalia, Hesse, Rhineland-Palatinate and Saarland, north: Lower Saxony, Bremen, Hamburg and Schleswig-Holstein, as well as east: Mecklenburg-Western Pomerania, Brandenburg, Berlin, Saxony, Saxony-Anhalt and Thuringia. Natural plus LULUCF fluxes in Germany are treated as a single flux category.</p>
      <p id="d2e596">Outside Germany, we do not distinguish sectoral emissions, with one exception. Agriculture emissions in the Netherlands form their own category, as we found that they strongly influence the <inline-formula><mml:math id="M23" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations in Germany, caused by the proximity and high emission rates in the Netherlands. We define further categories by area for anthropogenic emissions excluding LULUCF such that a comparably high resolution is obtained in regions near Germany with high observation coverage. These area-defined flux categories follow borders as feasible for the inversion. Areas with small expected influence on inversion results for Germany are combined in large categories, such as Spain plus Portugal, Türkiye plus Greece, and large areas east of Poland. All area-defined categories are shown in Fig. <xref ref-type="fig" rid="F1"/> and an overview of the sector resolution is given in Table <xref ref-type="table" rid="T1"/>.</p>

<table-wrap id="T1" specific-use="star"><label>Table 1</label><caption><p id="d2e618">Overview of sectors distinguished in the inversion and number of flux categories. We distinguish the focus region, well-observed regions near the focus region, and regions in large distance from the focus region (“remote”). The latter are split in very large flux categories with low a priori uncertainty. Natural plus LULUCF fluxes are separated from other anthropogenic emissions only in regions where the natural fluxes are strong and in Germany. One extra category in the well-observed regions is the Upper Silesian Coal Basin (marked * in the last column). See Fig. <xref ref-type="fig" rid="F1"/> for the definition of flux categories on the map.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="120pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="140pt"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="60pt"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Classification</oasis:entry>
         <oasis:entry colname="col2" align="left">Countries and regions</oasis:entry>
         <oasis:entry colname="col3" align="left">Sectors</oasis:entry>
         <oasis:entry colname="col4" align="left"># of areas</oasis:entry>
         <oasis:entry colname="col5"># of flux categories</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">focus region</oasis:entry>
         <oasis:entry colname="col2" align="left">Germany</oasis:entry>
         <oasis:entry colname="col3" align="left">agriculture, LULUCF + natural, other</oasis:entry>
         <oasis:entry colname="col4" align="left">6 agr., 4 other, 1 LULUCF</oasis:entry>
         <oasis:entry colname="col5">11</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">focus region</oasis:entry>
         <oasis:entry colname="col2" align="left">the Netherlands</oasis:entry>
         <oasis:entry colname="col3" align="left">agriculture, other</oasis:entry>
         <oasis:entry colname="col4" align="left">1</oasis:entry>
         <oasis:entry colname="col5">2</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">well observed</oasis:entry>
         <oasis:entry colname="col2" align="left">Sweden, Norway</oasis:entry>
         <oasis:entry colname="col3" align="left">LULUCF + natural, anthropogenic</oasis:entry>
         <oasis:entry colname="col4" align="left">2</oasis:entry>
         <oasis:entry colname="col5">4</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">well observed</oasis:entry>
         <oasis:entry colname="col2" align="left">DK, PL, CZ, AU, SK, HU, SV, HR, BA, CH, FR, BE, LU, UK, IE, northern IT, North Sea</oasis:entry>
         <oasis:entry colname="col3" align="left">anthropogenic (excl. LULUCF)</oasis:entry>
         <oasis:entry colname="col4" align="left">16</oasis:entry>
         <oasis:entry colname="col5">17*</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">remote</oasis:entry>
         <oasis:entry colname="col2" align="left">Finland, north-western Russia</oasis:entry>
         <oasis:entry colname="col3" align="left">LULUCF + natural, anthropogenic</oasis:entry>
         <oasis:entry colname="col4" align="left">2</oasis:entry>
         <oasis:entry colname="col5">4</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">remote</oasis:entry>
         <oasis:entry colname="col2" align="left">other</oasis:entry>
         <oasis:entry colname="col3" align="left">anthropogenic (excl. LULUCF)</oasis:entry>
         <oasis:entry colname="col4" align="left">8</oasis:entry>
         <oasis:entry colname="col5">8</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d2e772">We treat natural plus LULUCF fluxes separately and categorize them only in Germany, Scandinavia, and the north-eastern part of our domain (hatched regions in Fig. <xref ref-type="fig" rid="F1"/>). This is motivated by strong <inline-formula><mml:math id="M24" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emissions from wetlands in summer in Scandinavia and northern Russia in our prior <xref ref-type="bibr" rid="bib1.bibx42" id="paren.27"/>. Uncategorized fluxes – whether natural or anthropogenic – are not scaled in the inversion, but still included in the transport simulation such that no fluxes are discarded. To avoid strong spatial gradients in the concentration fields, the boundaries between different area-defined categories are smoothened as visualized in Fig. <xref ref-type="fig" rid="F1"/>.</p>
      <p id="d2e793">We furthermore define a separate flux category for the strongest <inline-formula><mml:math id="M25" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> plume in Central Europe to mitigate the plume localization problem described below (Sect. <xref ref-type="sec" rid="Ch1.S2.SS2"/>). These are fugitive emissions from the Upper Silesian Coal Basin with yearly emissions of <inline-formula><mml:math id="M26" display="inline"><mml:mn mathvariant="normal">567</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M27" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">kt</mml:mi></mml:mrow></mml:math></inline-formula> in our prior (white ellipse in Fig. <xref ref-type="fig" rid="F1"/>).</p>
</sec>
<sec id="Ch1.S2.SS1.SSS4">
  <label>2.1.4</label><title>Tracer assignment in the transport model</title>
      <p id="d2e834">In the transport simulation, we consider not only the categorized fluxes, but also the <inline-formula><mml:math id="M28" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from lateral boundaries and from uncategorized emissions. Overall, we simulate the transport of 50 tracer fields in the deterministic model run:<fn id="Ch1.Footn1"><p id="d2e848">Technically, the simulation includes 58 tracers in an attempt to split up the sector “other” in Germany in three sectors. Since we do not use these additional data here, we describe the setup for the 50 tracers we actually used.</p></fn></p>
      <p id="d2e851"><list list-type="custom">
              <list-item><label>(i)</label>

      <p id="d2e856"><italic>Sum of all anthropogenic emissions excluding LULUCF.</italic> This constitutes a single, common tracer.</p>
              </list-item>
              <list-item><label>(ii)</label>

      <p id="d2e864"><italic>Sum of all natural plus LULUCF fluxes.</italic> This constitutes another single, common tracer, which summed with (i) covers all a priori emissions in the domain.</p>
              </list-item>
              <list-item><label>(iii)</label>

      <p id="d2e872"><italic>Far field.</italic> The far field contains the <inline-formula><mml:math id="M29" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from initial and lateral boundary conditions.</p>
              </list-item>
            </list>The sum of (i)–(iii) is the total a priori <inline-formula><mml:math id="M30" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration. The a posteriori concentration is not computed directly. Instead, we treat the deviation of the posterior concentration from the prior as a perturbation. To compute this perturbation, we simulate the transport of each flux category: <list list-type="custom"><list-item><label>(iv)</label>
      <p id="d2e904"><italic>Flux categories.</italic> For each of the 46 flux categories an own tracer field is defined. To avoid the accumulation of categorized <inline-formula><mml:math id="M31" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> beyond the time scale on which we consider the modeled transport reliable, we set an artificial decay rate of these concentrations. After emission, the concentration in these tracer fields decays exponentially with a mean lifetime of 5 d. This technical feature constitutes a localization in time similar to the commonly used localization in space <xref ref-type="bibr" rid="bib1.bibx45" id="paren.28"><named-content content-type="pre">e.g.,</named-content></xref> and allows a waning of sectoral and regional attribution over a few days. This regulates that any attribution of a <inline-formula><mml:math id="M32" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> anomaly to a certain region or sector is only attempted if the emission was fresh or a few days ago. Furthermore, this allows us to save computing time by limiting the transport of these flux category tracer fields to altitudes below <inline-formula><mml:math id="M33" display="inline"><mml:mn mathvariant="normal">8</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M34" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula>. The artificial decay rate affects the posterior concentration and the sensitivity of the inversion to changes in the emissions. However, assuming that the typical time between emission and observation is short compared to the artificial lifetime and in the presence of transport model errors, we expect that this feature of our inversion system leads to more robust results.</p></list-item><list-item><label>(v)</label>
      <p id="d2e952"><italic>Auxiliary field for plume detection.</italic> For the purpose of investigating the model uncertainty due to the plume from the Upper Silesian Coal Basin, an auxiliary tracer is added (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS1"/>). This tracer is never added to the total <inline-formula><mml:math id="M35" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration but only serves as an indicator for the plume location.</p></list-item></list></p>
</sec>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Plume localization problem</title>
      <p id="d2e979">In our transport simulation and inversion, we address the specific challenge posed by plumes from high emissions in small areas. The inversion may be biased for such plumes due to the so-called double penalty issue <xref ref-type="bibr" rid="bib1.bibx50" id="paren.29"/>. In cases where our model falsely predicts that the plume reaches an observation site, the inversion will reduce the emissions to improve the agreement with the observation. In the opposite case, when the model fails to predict that a plume reaches the observation, the inversion will not change the plume emission amount but will wrongly increase emissions in other areas instead. This can cause a systematic underestimation of fluxes from localized plumes. To avoid biases in the inversion results, we suggest to treat strong plumes separately, with their own flux categories. This allows us to quantify the problem (see Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>) and to limit the plume penalty influence on other flux categories.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Far-field correction</title>
      <p id="d2e996">For cases where the model predicts almost no influence from our categorized emissions (i.e., clean air cases), deviations between model and observations point to the need for correcting the <inline-formula><mml:math id="M36" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> advected across the lateral boundaries – here referred to as “far field”.<fn id="Ch1.Footn2"><p id="d2e1010">Technically, the far field also includes the initial <inline-formula><mml:math id="M37" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration. But this is hardly relevant due to our generous spin-up period of 17 d.</p></fn> For our regional inversion problem, it is essential to separate the <inline-formula><mml:math id="M38" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emitted within the domain from the far field, in order to avoid model biases which would confound the aspired flux scaling <xref ref-type="bibr" rid="bib1.bibx9" id="paren.30"><named-content content-type="pre">see, e.g.,</named-content><named-content content-type="post">for <inline-formula><mml:math id="M39" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></named-content></xref>. To minimize potential biases arising from imperfect boundary conditions, we construct a correction field which is added to the modeled far-field concentration in the whole domain after the transport simulation. We require this correction field to be smooth on spatial and temporal scales <inline-formula><mml:math id="M40" display="inline"><mml:mn mathvariant="normal">320</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M41" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> (horizontal), <inline-formula><mml:math id="M42" display="inline"><mml:mn mathvariant="normal">1</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M43" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> (vertical), and <inline-formula><mml:math id="M44" display="inline"><mml:mn mathvariant="normal">16</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M45" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula> (time). We construct this far-field correction using a Kalman smoother as described in detail in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>. This construction uses only clean-air observations with a cumulated signal of all flux categories of <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M47" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> and a total signal from emissions within our domain of <inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M49" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d2e1138">Figure <xref ref-type="fig" rid="F2"/> shows a statistical overview of the far-field correction when using real observations (red line) or pseudo-observations (shaded area). The considered pseudo-observations are generated from the ensemble members of the transport simulation and represent the case where simulated emissions and boundary conditions are perfect, i.e., equal to the truth. The far-field correction range is usually limited to <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M51" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> when using real observation data and <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M53" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> in the synthetic observation experiments (Fig. <xref ref-type="fig" rid="F2"/>a) with variations of a few ppb per day (Fig. <xref ref-type="fig" rid="F2"/>b). The broad distribution of the root mean square (RMS) for different observation sites and months in Fig. <xref ref-type="fig" rid="F2"/>c indicates significant differences among the stations when using real observations.</p>

      <fig id="F2" specific-use="star"><label>Figure 2</label><caption><p id="d2e1188">Statistical evaluation of the far-field correction at the observation coordinates when using synthetic observations (light blue area) or real observations (dark red line). Considering all data points used in the inversion, histograms of the far-field correction show <bold>(a)</bold> the range of the correction and <bold>(b)</bold> its temporal variation. For each station, month, and realization of pseudo-observations, we compute the root mean square (RMS) and the mean (or bias). Histograms combining these values for all stations and months are shown in <bold>(c)</bold> and <bold>(d)</bold>.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025-f02.png"/>

        </fig>

      <p id="d2e1210">Figure <xref ref-type="fig" rid="F2"/>d shows that the correction has a small bias towards positive corrections even when using synthetic observations with unbiased fluxes and boundary conditions. This is partially due to the pseudo-observations, which are biased by <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M55" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> compared to the simulated concentrations due to details of the transport model configuration. The other part of the bias hints to a more general problem. We construct the far-field correction using observations for which the model predicts clean air, i.e., a low signal from the emissions. Since the transport model is not perfect, this introduces a sampling bias: We select more observations for which the model underestimates the concentrations and thereby increase the bias to <inline-formula><mml:math id="M56" display="inline"><mml:mn mathvariant="normal">1.2</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M57" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>. In response to this bias, the far-field correction increases the simulated concentrations by <inline-formula><mml:math id="M58" display="inline"><mml:mn mathvariant="normal">1.0</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M59" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d2e1264">The sampling bias will likely also occur when working with real observations. But the estimated correction bias of <inline-formula><mml:math id="M60" display="inline"><mml:mn mathvariant="normal">0.6</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M61" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> due to the sampling is small compared to the accuracy of the Copernicus Atmosphere Monitoring Service (CAMS) inversion-optimized data product used for our boundary conditions <xref ref-type="bibr" rid="bib1.bibx43" id="paren.31"/> (see Sect. <xref ref-type="sec" rid="Ch1.S3.SS1"/>). We therefore do not expect a significant impact on the emission estimates.</p>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>General approach of the inversion framework</title>
      <p id="d2e1295">We use a Bayesian inversion to optimize the agreement of model and observations. We define a vector of scaling factors – in our application <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mn mathvariant="normal">46</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> – consisting of one prefactor for each flux category. This low-dimensional parametrization of the fluxes leads to the optimization problem

            <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M63" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>post</mml:mtext></mml:msup><mml:mo>=</mml:mo><mml:munder><mml:mtext>arg min</mml:mtext><mml:mi mathvariant="bold-italic">s</mml:mi></mml:munder><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo mathvariant="italic" mathsize="2.5em">{</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">B</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>)</mml:mo><mml:mo mathvariant="italic" mathsize="2.5em">}</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

          for the posterior scaling factors <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>post</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula>. Here, the first term penalizes the deviation from the observed concentrations, and the second term penalizes the deviation from the prior fluxes. In the first term, the vector <inline-formula><mml:math id="M65" display="inline"><mml:mi mathvariant="bold-italic">y</mml:mi></mml:math></inline-formula> of observed concentrations is compared to the model prediction, which consists of the contribution <inline-formula><mml:math id="M66" display="inline"><mml:mrow><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi></mml:mrow></mml:math></inline-formula> of fluxes within the model domain and the modeled far field <inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> including the far-field correction. All model predictions (<inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi></mml:mrow></mml:math></inline-formula>) are already projected to the observation space. The contribution of fluxes <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi></mml:mrow></mml:math></inline-formula> depends linearly on the vector <inline-formula><mml:math id="M71" display="inline"><mml:mi mathvariant="bold-italic">s</mml:mi></mml:math></inline-formula>. The difference between modeled and observed values is weighted by the error covariance matrix <inline-formula><mml:math id="M72" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> describing the combined uncertainty of the transport model and the observations. With the second term we constrain the deviation of <inline-formula><mml:math id="M73" display="inline"><mml:mi mathvariant="bold-italic">s</mml:mi></mml:math></inline-formula> from a priori scaling factors <inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mi>k</mml:mi><mml:mtext>prior</mml:mtext></mml:msubsup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> for all <inline-formula><mml:math id="M76" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>) with an error covariance matrix <inline-formula><mml:math id="M77" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula> characterizing the a priori uncertainty (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS8"/>).</p>
      <p id="d2e1586">In Eq. (<xref ref-type="disp-formula" rid="Ch1.E1"/>), the model observation operator <inline-formula><mml:math id="M78" display="inline"><mml:mi mathvariant="bold">H</mml:mi></mml:math></inline-formula> connects the space of scaling factors (vectors <inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>post</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula>) to the observation space (vectors <inline-formula><mml:math id="M81" display="inline"><mml:mi mathvariant="bold-italic">y</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula>). Computing <inline-formula><mml:math id="M83" display="inline"><mml:mi mathvariant="bold">H</mml:mi></mml:math></inline-formula> requires the transport model which distinguishes the flux categories. The setup is designed for optimizing a low-dimensional vector <inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>post</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> of scaling factors (<inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> degrees of freedom) using a large number of observations (<inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">4</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>), but an extension to more degrees of freedom and/or more observations is possible.</p>
</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>Approximations for the error covariance matrix <inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></title>
      <p id="d2e1702">The definition of the error covariance matrix <inline-formula><mml:math id="M88" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> in Eq. (<xref ref-type="disp-formula" rid="Ch1.E1"/>) is crucial for the inversion. <inline-formula><mml:math id="M89" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> describes the combined uncertainties and correlations of observations and model predictions. In our case, the observation uncertainty <xref ref-type="bibr" rid="bib1.bibx19" id="paren.32"><named-content content-type="pre">usually <inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:mo>≲</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M91" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>,</named-content></xref> is small compared to the ensemble-estimated transport uncertainty (typically <inline-formula><mml:math id="M92" display="inline"><mml:mn mathvariant="normal">5</mml:mn></mml:math></inline-formula> to <inline-formula><mml:math id="M93" display="inline"><mml:mn mathvariant="normal">10</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M94" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>). We therefore focus on the model uncertainty.</p>
      <p id="d2e1767">Many works have used diagonal <inline-formula><mml:math id="M95" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> matrices <xref ref-type="bibr" rid="bib1.bibx3 bib1.bibx35 bib1.bibx45" id="paren.33"><named-content content-type="pre">e.g.</named-content></xref> and others found non-diagonal approximations for <inline-formula><mml:math id="M96" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx16 bib1.bibx44" id="paren.34"/>. Here, we use the diagonal <inline-formula><mml:math id="M97" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> for comparison to two different ways of constructing a non-diagonal <inline-formula><mml:math id="M98" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> matrix from our transport ensemble. We therefore compare three ways of constructing <inline-formula><mml:math id="M99" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>:
          <def-list>
            <def-item><term>Diagonal <bold>R</bold>:</term><def>

      <p id="d2e1823">This baseline scenario considers a diagonal <inline-formula><mml:math id="M100" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> matrix and discards all information from the transport ensemble.</p>
            </def></def-item>
            <def-item><term>Prior <bold>R</bold>:</term><def>

      <p id="d2e1842">In a standard ensemble approach, we construct <inline-formula><mml:math id="M101" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> using the transport ensemble with a priori fluxes.</p>
            </def></def-item>
            <def-item><term>Posterior <bold>R</bold>:</term><def>

      <p id="d2e1861">We extend the standard approach by estimating <inline-formula><mml:math id="M102" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> using the posterior fluxes in the transport ensemble.</p>
            </def></def-item>
          </def-list>
          The construction of the different <inline-formula><mml:math id="M103" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> matrices consists of two steps that are described below. First, we construct a matrix <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> that estimates the dominant uncertainties and correlations using one of the three methods. Second, we obtain <inline-formula><mml:math id="M105" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> from <inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> by inflating and adding additional uncertainties to mitigating some known issues of the inversion (Sect. <xref ref-type="sec" rid="Ch1.S2.SS6"/>).</p>
<sec id="Ch1.S2.SS5.SSS1">
  <label>2.5.1</label><title>Diagonal <inline-formula><mml:math id="M107" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula></title>
      <p id="d2e1927">In the baseline scenario of a diagonal <inline-formula><mml:math id="M108" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> matrix, all observation and model uncertainties are assumed to be uncorrelated. However, it is known that model predictions for observations separated by only 1 h usually have correlated errors. To avoid underestimating the overall uncertainty without introducing correlations in <inline-formula><mml:math id="M109" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>, we assume high uncertainties of each observation. Following <xref ref-type="bibr" rid="bib1.bibx45" id="text.35"/>, we assume that the signal from <inline-formula><mml:math id="M110" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emissions within our domain will generally increase the model uncertainty in the predicted <inline-formula><mml:math id="M111" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration. This motivates defining <inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow><mml:mo>′</mml:mo></mml:msubsup><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>const</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mi mathvariant="bold">H</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:msubsup><mml:mo>)</mml:mo><mml:mi>i</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> where <inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>const</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M114" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:mi mathvariant="italic">β</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> are scalar tuning factors. Index <inline-formula><mml:math id="M116" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> labels observation data points that are typically distinguished by location, time, and sampling height. The diagonal <inline-formula><mml:math id="M117" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> scenario uses crude approximations because the selection of observations is designed for an inversion that can handle correlations. However, we will obtain qualitative insights from the comparison to the other approximations for <inline-formula><mml:math id="M118" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S2.SS5.SSS2">
  <label>2.5.2</label><title>Prior <inline-formula><mml:math id="M119" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula></title>
      <p id="d2e2089">This approximation of <inline-formula><mml:math id="M120" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> is based on an ensemble of <inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:mi>M</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:math></inline-formula> different transport realizations. The potential of using a small transport ensemble for estimating model uncertainties was demonstrated by <xref ref-type="bibr" rid="bib1.bibx44" id="text.36"/>. We can use the covariance of the ensemble members to estimate the transport uncertainty. We define

              <disp-formula id="Ch1.E2" content-type="numbered"><label>2</label><mml:math id="M122" display="block"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mo>′</mml:mo></mml:msubsup><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mi>M</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mfrac></mml:mstyle><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>m</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>M</mml:mi></mml:munderover><mml:mo mathsize="1.1em">(</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo mathsize="1.1em">)</mml:mo><mml:mo mathsize="1.1em">(</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>j</mml:mi><mml:mi>m</mml:mi></mml:msubsup><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:mo mathsize="1.1em">)</mml:mo><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>const</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

            where <inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> is the prediction of ensemble member <inline-formula><mml:math id="M124" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> for observation <inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> assuming a priori fluxes, <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mi>M</mml:mi></mml:mfrac></mml:mstyle><mml:msub><mml:mo>∑</mml:mo><mml:mi>m</mml:mi></mml:msub><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> is the ensemble mean, and <inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>const</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M128" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> is a constant uncertainty added to each observation. With this uncorrelated uncertainty <inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>const</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, we account for additional uncertainties, such as representativity errors inherent to a simulation at finite resolution. Indices <inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:math></inline-formula> label observation data points. By <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> we denote a localization in space and time such that <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> for any observations <inline-formula><mml:math id="M134" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M135" display="inline"><mml:mi>j</mml:mi></mml:math></inline-formula> that we expect to be uncorrelated because of their temporal or spatial separation. In the application to Germany, we choose <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> to be a Gaussian localization matrix with standard deviations <inline-formula><mml:math id="M137" display="inline"><mml:mn mathvariant="normal">6</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M138" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula> (time), <inline-formula><mml:math id="M139" display="inline"><mml:mn mathvariant="normal">319</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M140" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> (horizontal), and <inline-formula><mml:math id="M141" display="inline"><mml:mn mathvariant="normal">400</mml:mn></mml:math></inline-formula> m (vertical). We use the notation <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> if <inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> if <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mi>i</mml:mi><mml:mo>≠</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S2.SS5.SSS3">
  <label>2.5.3</label><title>Posterior <inline-formula><mml:math id="M146" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula></title>
      <p id="d2e2530">The posterior <inline-formula><mml:math id="M147" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> approximation is a variation of the prior <inline-formula><mml:math id="M148" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> approximation. In Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>), we use model predictions for the concentrations <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula>. Instead of using the prior concentrations as in the prior <inline-formula><mml:math id="M150" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> construction, we can define <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> as the posterior concentrations and thereby allow <inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula> to change as the inversion changes the fluxes. This leads to a self-consistent estimate of <inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> in the inversion. Consequently, Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>) remains valid but <inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M156" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> become functions of the scaling factors <inline-formula><mml:math id="M157" display="inline"><mml:mi mathvariant="bold-italic">s</mml:mi></mml:math></inline-formula>. Since <inline-formula><mml:math id="M158" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> is estimated using posterior scaling factors, we call this method the posterior <inline-formula><mml:math id="M159" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion as opposed to the prior <inline-formula><mml:math id="M160" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> estimate. To compute the posterior concentration <inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> for each ensemble member without prohibitive computational effort, we use an approximation described in Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>.</p>
      <p id="d2e2691">As opposed to the diagonal <inline-formula><mml:math id="M162" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and prior <inline-formula><mml:math id="M163" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion with fixed <inline-formula><mml:math id="M164" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>, the posterior <inline-formula><mml:math id="M165" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion does not allow for a closed form solution of Eq. (<xref ref-type="disp-formula" rid="Ch1.E1"/>). To solve the minimization problem in Eq. (<xref ref-type="disp-formula" rid="Ch1.E1"/>) numerically, we used SciPy's “trust-exact” implementation of a trust-region method <xref ref-type="bibr" rid="bib1.bibx52 bib1.bibx33 bib1.bibx10" id="paren.37"/>. Within each iteration, the incomplete LU decomposition <xref ref-type="bibr" rid="bib1.bibx29 bib1.bibx28" id="paren.38"/> of the sparse matrix <inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:mi mathvariant="bold">R</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the most computationally expensive task when the number of observations is large.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS6">
  <label>2.6</label><title>Additional uncertainties and final error covariance matrix <inline-formula><mml:math id="M167" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula></title>
      <p id="d2e2764">The previously derived approximations for the error covariance matrices <inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> describe our knowledge of the transport uncertainty and the observation uncertainty. In the next four steps, we increase uncertainties and include other possible sources of uncertainty to obtain approximations for <inline-formula><mml:math id="M169" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> that are suitable for the inversion.</p>
<sec id="Ch1.S2.SS6.SSS1">
  <label>2.6.1</label><title>Mitigating the plume localization problem</title>
      <p id="d2e2792">To reduce the bias which we predicted for strong plumes in Sect. <xref ref-type="sec" rid="Ch1.S2.SS2"/>, we increase the uncertainty for all observations that are likely affected by a plume. The transport ensemble will already lead to an increased uncertainty when the model cannot predict reliably whether a plume hits an observation site. But with an ensemble of only 12 members, this will not cover all cases where model and observations deviate. We therefore introduce an auxiliary tracer that contains emissions from the Upper Silesian Coal Basin, spatially smoothened on a length scale of <inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.4</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (one standard deviation of a Gaussian filter). Denoting the concentration of this tracer at observation <inline-formula><mml:math id="M171" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> by <inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, we increase the uncertainties to <inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mtext>step 1</mml:mtext></mml:msup><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mo>′</mml:mo></mml:msubsup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.25</mml:mn><mml:msubsup><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi>i</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S2.SS6.SSS2">
  <label>2.6.2</label><title>Dynamic uncertainty inflation</title>
      <p id="d2e2875">To avoid potential biases through site-specific small-scale features not captured in the model, we aim to base our inversion on many observations. To this end, we limit the influence of individual data points on the inversion result by inflating the uncertainty further in the case of a very large disagreement between model and observation. This is achieved by an uncertainty inflation of individual observations until the deviation <inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> between model and observations is at most three standard deviations of the resulting error covariance matrix <inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 2</mml:mtext></mml:msubsup><mml:mo>=</mml:mo><mml:msub><mml:mi>g</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mi>g</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 1</mml:mtext></mml:msubsup></mml:mrow></mml:math></inline-formula>, i.e., <inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:msub><mml:mi>g</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>max⁡</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>|</mml:mo></mml:mrow><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:msqrt><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow><mml:mtext>step 1</mml:mtext></mml:msubsup></mml:mrow></mml:msqrt></mml:mrow></mml:mfrac></mml:mstyle><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula>. This is justified because large deviations between model and observations, <inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:msqrt><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow><mml:mtext>step 1</mml:mtext></mml:msubsup></mml:mrow></mml:msqrt></mml:mrow></mml:math></inline-formula>, are likely caused by local pollution or modeling problems that are not captured appropriately in our uncertainty estimate. This correction makes sure that inversion results will be based on many observations and no single measurement can have an extreme impact. At the same time, this method it is less sensitive to tuning parameters than discarding outliers completely.</p>
</sec>
<sec id="Ch1.S2.SS6.SSS3">
  <label>2.6.3</label><title>Static uncertainty inflation</title>
      <p id="d2e3034">The transport ensemble in the prior <inline-formula><mml:math id="M178" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M179" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> construction may not necessarily include the full uncertainty of the transport model, and the localization <inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> further reduces the simulated uncertainty by suppressing correlations. This motivates another inflation of the uncertainty to avoid overconfidence in the model prediction. We inflate the uncertainty by a factor <inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> depending on the observation site of observation <inline-formula><mml:math id="M182" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>, leading to <inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 3</mml:mtext></mml:msubsup><mml:mo>=</mml:mo><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mi>f</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 2</mml:mtext></mml:msubsup></mml:mrow></mml:math></inline-formula>. We choose <inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> except for some stations with known difficulties, for which <inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> (see Table <xref ref-type="table" rid="TC1a"/>). To keep the methods for constructing <inline-formula><mml:math id="M186" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> comparable, we apply this inflation also to the diagonal <inline-formula><mml:math id="M187" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> matrix.</p>
</sec>
<sec id="Ch1.S2.SS6.SSS4">
  <label>2.6.4</label><title>Far-field uncertainty</title>
      <p id="d2e3180">We furthermore account for the uncertainty in the far-field correction, although the effect of this additional uncertainty is small. We define <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 4</mml:mtext></mml:msubsup><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 3</mml:mtext></mml:msubsup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> where <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> denotes the smooth correction field introduced in Sect. <xref ref-type="sec" rid="Ch1.S2.SS3"/> at observation <inline-formula><mml:math id="M190" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is the Gaussian localization matrix constructed by the length and time scales of the far-field correction (see Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>).</p>
</sec>
<sec id="Ch1.S2.SS6.SSS5">
  <label>2.6.5</label><title><inline-formula><mml:math id="M192" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> analysis</title>
      <p id="d2e3312">To assess whether the estimated uncertainties are reasonable, one can compute the <inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> value <xref ref-type="bibr" rid="bib1.bibx34" id="paren.39"/>. This value compares the a priori model–observation mismatch to the uncertainty assumed for this mismatch (see Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/> for details). A value of <inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> indicates that uncertainties are underestimated, whereas values smaller than one indicate the opposite. When comparing the observations to the far-field-corrected model, we find <inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0.16</mml:mn></mml:mrow></mml:math></inline-formula> for the prior <inline-formula><mml:math id="M196" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion when using real observations (see Table <xref ref-type="table" rid="T2"/>). In an idealized setup, this indicates that the uncertainties of the model-data mismatch are overestimated by a factor <inline-formula><mml:math id="M197" display="inline"><mml:mn mathvariant="normal">2.5</mml:mn></mml:math></inline-formula>. This implies that our uncertainty inflation by a factor <inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> for most observations seems unnecessary in the idealized setup. However, our data can contain unknown biases in transport and boundary conditions, and simplifying assumptions about the representativity of the low-dimensional state space of the inversion. We contain these potential issues of unknown error components by inflating the uncertainties.</p>

<table-wrap id="T2"><label>Table 2</label><caption><p id="d2e3417">Median of <inline-formula><mml:math id="M199" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> for different configurations. <inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> for the prior <inline-formula><mml:math id="M201" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion also serves as an approximation for the posterior <inline-formula><mml:math id="M202" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion. Synthetic observations are generated using the ensemble simulation, assuming that the a priori fluxes and the <inline-formula><mml:math id="M203" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration on lateral boundaries are known exactly.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Observations</oasis:entry>
         <oasis:entry colname="col2">Far-field</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>,</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M205" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>,</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">correction</oasis:entry>
         <oasis:entry colname="col3">diagonal <inline-formula><mml:math id="M206" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">prior <inline-formula><mml:math id="M207" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">real</oasis:entry>
         <oasis:entry colname="col2">yes</oasis:entry>
         <oasis:entry colname="col3">0.18</oasis:entry>
         <oasis:entry colname="col4">0.16</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">real</oasis:entry>
         <oasis:entry colname="col2">no</oasis:entry>
         <oasis:entry colname="col3">0.21</oasis:entry>
         <oasis:entry colname="col4">0.18</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">synthetic</oasis:entry>
         <oasis:entry colname="col2">yes</oasis:entry>
         <oasis:entry colname="col3">0.05</oasis:entry>
         <oasis:entry colname="col4">0.03</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">synthetic</oasis:entry>
         <oasis:entry colname="col2">no</oasis:entry>
         <oasis:entry colname="col3">0.06</oasis:entry>
         <oasis:entry colname="col4">0.03</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d2e3637">In the synthetic experiments, the idealized transport uncertainty and perfect a priori emissions lead to even lower <inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, which is expected because not all uncertainties are contained in the pseudo-observations of these synthetic experiments. Computing <inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> for the posterior <inline-formula><mml:math id="M210" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion is more difficult, but the result is expected to be similar to the prior <inline-formula><mml:math id="M211" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion. The tuning parameters of the diagonal <inline-formula><mml:math id="M212" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> matrix were chosen such that the posterior uncertainties are similar to the prior <inline-formula><mml:math id="M213" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion, which also leads to similar <inline-formula><mml:math id="M214" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (see Table <xref ref-type="table" rid="T2"/>).</p>
</sec>
</sec>
<sec id="Ch1.S2.SS7">
  <label>2.7</label><title>Inversion time window and temporal aggregation</title>
      <p id="d2e3727">We simulate the transport for the whole year 2021 without any interruption. The inversion is then applied to each month separately by selecting only observations within 1 month. The scaling factors of the months are treated as independent, each month starting with the same a priori scaling factors (<inline-formula><mml:math id="M215" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mi>k</mml:mi><mml:mtext>prior</mml:mtext></mml:msubsup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> for all <inline-formula><mml:math id="M216" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>) and the same a priori scaling uncertainties (<inline-formula><mml:math id="M217" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula> matrix). The continuous transport simulation over the whole year implies that the initial <inline-formula><mml:math id="M218" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration is hardly relevant after the spin-up. At the beginning of each month, the modeled <inline-formula><mml:math id="M219" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration already consists of the far field – the contribution of the lateral boundaries – and the contribution of the fluxes, which will be adjusted by the inversion.</p>
      <p id="d2e3783">In summary, we correct the contribution of the lateral boundaries on the time scale of <inline-formula><mml:math id="M220" display="inline"><mml:mn mathvariant="normal">16</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M221" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula> by the far-field correction, and the fluxes on the time scale of 1 month defined by the inversion time window. The inversion results consist of one vector <inline-formula><mml:math id="M222" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>post</mml:mtext></mml:msup><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mn mathvariant="normal">46</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> of scaling factors and the corresponding error covariance matrix for each month. When aggregating results for the whole year, we treat the uncertainties of the prior or posterior fluxes of different months as correlated because these likely include systematic uncertainties and biases which we cannot fully separate from the statistical uncertainty. We therefore aggregate by adding up absolute emissions and their uncertainties linearly.</p>
</sec>
<sec id="Ch1.S2.SS8">
  <label>2.8</label><title>Prior uncertainties</title>
      <p id="d2e3827">In each inversion time window, we consider a priori scaling factors with a two standard deviation (<inline-formula><mml:math id="M223" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>) uncertainty of <inline-formula><mml:math id="M224" display="inline"><mml:mn mathvariant="normal">0.8</mml:mn></mml:math></inline-formula> for most flux categories, corresponding to a <inline-formula><mml:math id="M225" display="inline"><mml:mrow><mml:mn mathvariant="normal">95</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> confidence interval of <inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula>. Throughout this paper, uncertainties will denote two standard deviations or <inline-formula><mml:math id="M227" display="inline"><mml:mrow><mml:mn mathvariant="normal">95</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> confidence intervals. Categories resolving emission sectors have a higher prior <inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> uncertainty of <inline-formula><mml:math id="M229" display="inline"><mml:mn mathvariant="normal">1.0</mml:mn></mml:math></inline-formula>, and within Germany categories describing the same sector have an a priori uncertainty correlation of <inline-formula><mml:math id="M230" display="inline"><mml:mn mathvariant="normal">0.5</mml:mn></mml:math></inline-formula> (e.g., uncertainties of agriculture emissions in the German states of Bavaria and Baden-Wuerttemberg are assumed to be correlated). All other categories are treated as uncorrelated in the a priori. For the Upper Silesian Coal Basin as well as regions with low observation density outside of our primary focus in Central Europe (marked “remote” in Table <xref ref-type="table" rid="T1"/>), the <inline-formula><mml:math id="M231" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> uncertainty is set to <inline-formula><mml:math id="M232" display="inline"><mml:mn mathvariant="normal">0.5</mml:mn></mml:math></inline-formula>.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Input data and processing</title>
      <p id="d2e3933">We apply the method to estimate <inline-formula><mml:math id="M233" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes in the year 2021 in Germany and in the surrounding European domain, relying on input data for the transport simulation, <inline-formula><mml:math id="M234" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration on the lateral boundary (Sect. <xref ref-type="sec" rid="Ch1.S3.SS1"/>), a priori fluxes (Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/>), and observations (Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>).</p>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Initial and lateral boundary conditions</title>
      <p id="d2e3971">The meteorological initial and lateral boundary conditions used to drive our transport model are taken from the archive of DWD's operational NWP, which also employs the ICON model. As we do not assimilate meteorological data in our application, we re-initialize the meteorological fields every night at 00:00 UTC, using the analysis fields from the operational NWP data assimilation. Lateral boundary conditions for the meteorological fields are taken from the NWP short term forecasts with hourly resolution.</p>
      <p id="d2e3974">For the <inline-formula><mml:math id="M235" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations, we use initial and lateral boundary concentrations from the CAMS global inversion-optimized dataset <xref ref-type="bibr" rid="bib1.bibx42" id="paren.40"/>, version v22r2, in the variant based on surface air-sample data for the inversion. The CAMS data have a resolution of <inline-formula><mml:math id="M236" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">°</mml:mi><mml:mo>×</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> and are interpolated onto our model grid. In contrast to the meteorological fields, the <inline-formula><mml:math id="M237" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations are only transported and never re-initialized. Each transport ensemble member uses slightly different initial and lateral boundary conditions for meteorological fields (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS1.SSS2"/>), but equal <inline-formula><mml:math id="M238" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations on the lateral boundaries.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>A priori <inline-formula><mml:math id="M239" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes</title>
      <p id="d2e4052">For the inversion, we employ a priori <inline-formula><mml:math id="M240" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes that were compiled from six datasets of anthropogenic and natural fluxes, as detailed in Table <xref ref-type="table" rid="T3"/>. We ensured mass conservation when interpolating to our model grid. We generally distinguish between anthropogenic emissions excluding LULUCF, and natural fluxes plus LULUCF. Since the input datasets for anthropogenic emissions are based on reporting to the UNFCCC, these distinguish between GNFR sectors following the reporting conventions <xref ref-type="bibr" rid="bib1.bibx51" id="paren.41"/>. For the inversion, we combine these sectors and only distinguish between agriculture and the sum of all other sectors as described in Sect. <xref ref-type="sec" rid="Ch1.S2.SS1.SSS3"/>. Natural plus LULUCF fluxes of <inline-formula><mml:math id="M241" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are mostly dominated by wetland emissions, for which we do not distinguish between natural and anthropogenic origin.</p>

<table-wrap id="T3" specific-use="star"><label>Table 3</label><caption><p id="d2e4087">Input data for a priori <inline-formula><mml:math id="M242" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes. The second column lists where these fluxes were considered. Here, “Germany” refers to all model grid cells that lie fully within the German borders. The national reporting distinguishes emissions by GNFR sectors of which A–M include all anthropogenic emissions excluding land use, land use change and forestry (LULUCF).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="70pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="70pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="50pt"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="50pt"/>
     <oasis:colspec colnum="5" colname="col5" align="justify" colwidth="40pt"/>
     <oasis:colspec colnum="6" colname="col6" align="justify" colwidth="150pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1" align="left">Data provider</oasis:entry>
         <oasis:entry colname="col2" align="left">Domain</oasis:entry>
         <oasis:entry colname="col3" align="left">Fluxes</oasis:entry>
         <oasis:entry colname="col4">Original grid</oasis:entry>
         <oasis:entry colname="col5" align="left">Time profile</oasis:entry>
         <oasis:entry colname="col6" align="left">Remarks</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1" align="left">Umweltbundesamt (UBA)</oasis:entry>
         <oasis:entry colname="col2" align="left">Germany</oasis:entry>
         <oasis:entry colname="col3" align="left">GNFR sectors A–M</oasis:entry>
         <oasis:entry colname="col4">native (ICON)</oasis:entry>
         <oasis:entry colname="col5" align="left">constant</oasis:entry>
         <oasis:entry colname="col6" align="left">Based on reporting to the UNFCCC <xref ref-type="bibr" rid="bib1.bibx48" id="paren.42"/>, spatially distributed using the Gridding Emission Tool for ArcGIS (GRETA 1.2.01) (S. Feigenspan, T. Wernicke, and C. Mielke, personal communication, 2024)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1" align="left">Thünen Institute</oasis:entry>
         <oasis:entry colname="col2" align="left">Germany</oasis:entry>
         <oasis:entry colname="col3" align="left">organic and mineral soils (part of LULUCF)</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:mn mathvariant="normal">100</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> m</oasis:entry>
         <oasis:entry colname="col5" align="left">constant</oasis:entry>
         <oasis:entry colname="col6" align="left">Emissions from organic and mineral soils, including wetlands but excluding artificial ponds (approx. <inline-formula><mml:math id="M244" display="inline"><mml:mn mathvariant="normal">160</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M245" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">kt</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">yr</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) (R. Fuß and J. Akubia, personal communication, 2024)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1" align="left">CAMS-REG-ANT, v7.0</oasis:entry>
         <oasis:entry colname="col2" align="left">model domain excl. Germany</oasis:entry>
         <oasis:entry colname="col3" align="left">GNFR sectors A–M</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.05</mml:mn><mml:mi mathvariant="italic">°</mml:mi><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5" align="left">constant</oasis:entry>
         <oasis:entry colname="col6" align="left">Based on data reported to the UNFCCC for countries in Western and Central Europe (incl. Finland and the Baltic states) <xref ref-type="bibr" rid="bib1.bibx25 bib1.bibx26" id="paren.43"/></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1" align="left">CAMS inversion optimized, v22r2</oasis:entry>
         <oasis:entry colname="col2" align="left">model domain excl. Germany, excl. oceans</oasis:entry>
         <oasis:entry colname="col3" align="left">wetlands</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">°</mml:mi><mml:mo>×</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5" align="left">monthly averages</oasis:entry>
         <oasis:entry colname="col6" align="left">Variant using surface air-sample data for the inversion <xref ref-type="bibr" rid="bib1.bibx42" id="paren.44"/>; Fluxes in model grid cells located over the ocean are set to zero.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1" align="left"><xref ref-type="bibr" rid="bib1.bibx39" id="text.45"/>, version 1.1</oasis:entry>
         <oasis:entry colname="col2" align="left">full model domain</oasis:entry>
         <oasis:entry colname="col3" align="left">rivers and streams</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.25</mml:mn><mml:mi mathvariant="italic">°</mml:mi><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.25</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5" align="left">monthly averages</oasis:entry>
         <oasis:entry colname="col6" align="left"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1" align="left">
                      <xref ref-type="bibr" rid="bib1.bibx53" id="text.46"/>
                    </oasis:entry>
         <oasis:entry colname="col2" align="left">oceans (full model domain)</oasis:entry>
         <oasis:entry colname="col3" align="left">oceans</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M249" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.25</mml:mn><mml:mi mathvariant="italic">°</mml:mi><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.25</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5" align="left">constant</oasis:entry>
         <oasis:entry colname="col6" align="left"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d2e4396">For Germany, we obtained a priori fluxes directly from the national inventory agencies. The a priori LULUCF fluxes obtained from the Thünen Institute cover the emissions from mineral and organic soils. Notably, this excludes emissions from artificial water bodies in Germany – such as ponds – amounting to <inline-formula><mml:math id="M250" display="inline"><mml:mn mathvariant="normal">160</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M251" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">kt</mml:mi></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:mn mathvariant="normal">8.5</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> of the total German emissions in the national reporting, though these numbers are associated with large uncertainties <xref ref-type="bibr" rid="bib1.bibx49" id="paren.47"><named-content content-type="post">Table 399</named-content></xref>. These emissions are missing in our a priori estimate, leading to a low bias in the a priori.</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Observations and pre-processing</title>
      <p id="d2e4438">We compare our model predictions to the high quality ground-based in situ observations of <inline-formula><mml:math id="M253" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations collected in the European Obspack <xref ref-type="bibr" rid="bib1.bibx20" id="paren.48"/>, which includes the ICOS stations among others. These observations are assumed to be representative for a larger area <xref ref-type="bibr" rid="bib1.bibx47" id="paren.49"/>. Table <xref ref-type="table" rid="TC1a"/> lists all 53 available stations and Fig. <xref ref-type="fig" rid="F1"/> shows 50 stations that were used for the inversion. For tower observations, we use up to three sampling heights per station, preferring the highest three sampling heights and discarding observations below 50 m above ground level to reduce the influence of very local emissions. Due to significant model–observation mismatch, we exclude the IPR, FKL and LMP stations. For LUT, BIR and HUN we only consider some seasons, specified in Table <xref ref-type="table" rid="TC1a"/>.</p>
      <p id="d2e4465">The model data are interpolated horizontally and vertically to the station sampling locations. The vertical sampling locations in model coordinates are derived from the station sampling heights and the modeled station elevations, depending on the station characteristics (column “mountain” in Table <xref ref-type="table" rid="TC1a"/>). For high mountain stations, the modeled station elevation is given by the real station elevation above mean sea level. For stations on smaller mountains, we consider the arithmetic mean between real station elevation and model topography as proposed by <xref ref-type="bibr" rid="bib1.bibx8" id="text.50"/> and <xref ref-type="bibr" rid="bib1.bibx18" id="text.51"/>, and for all other stations the modeled station elevation is set to the model topography.</p>
      <p id="d2e4476">To make use of observations which are likely well represented by the model, we filter the observations based on the local time of day, wind speed, and model–data mismatch. Table <xref ref-type="table" rid="T4"/> lists how the root mean square error (RMSE) of the model output changes during these pre-processing steps. We start by smoothing both observations and modeled concentrations in a time window of approximately <inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M255" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula> around each observation time as depicted in Fig. <xref ref-type="fig" rid="F3"/>. This allows for some uncertainty in the timing of modeled tracer transport. The resulting correlation of neighboring time steps is automatically considered in the ensemble-based uncertainty estimate.</p>

<table-wrap id="T4" specific-use="star"><label>Table 4</label><caption><p id="d2e4505">Average root mean square error (RMSE in ppb), mean absolute bias of the model prediction minus observation (in ppb), and number of available data points after each processing step (1–6) for synthetic (left) and real observations (right). Each row adds a processing step to all previous steps and improves the RMSE. Three numbers for steps 7 and 8 distinguish diagonal <inline-formula><mml:math id="M256" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>, prior <inline-formula><mml:math id="M257" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>, and posterior <inline-formula><mml:math id="M258" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion. Step 7 (uncertainty weighting) is not a processing step in the inversion since it uses only the diagonal of the uncertainty matrix <inline-formula><mml:math id="M259" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>, but it underscores the importance of accurate uncertainty estimation. Step 8 refers to the result of the inversion. RMSE and absolute bias are computed separately for each station, sampling height and month. The obtained values are weighted by the number of data points and averaged. By taking the mean of multiple RMSEs for different stations, sampling heights and months, we obtain lower numbers than for the RMSE of the combined dataset, which would average squared values and thereby would give higher weight to large deviations between model and observations.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="8">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right" colsep="1"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Step</oasis:entry>
         <oasis:entry rowsep="1" namest="col3" nameend="col5" align="center" colsep="1">Synthetic observations (ppb) </oasis:entry>
         <oasis:entry rowsep="1" namest="col6" nameend="col8" align="center">Real observations (ppb) </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">RMSE</oasis:entry>
         <oasis:entry colname="col4">Absolute bias</oasis:entry>
         <oasis:entry colname="col5">Data points</oasis:entry>
         <oasis:entry colname="col6">RMSE</oasis:entry>
         <oasis:entry colname="col7">Absolute bias</oasis:entry>
         <oasis:entry colname="col8">Data points</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">1</oasis:entry>
         <oasis:entry colname="col2">horizontal and vertical interpolation</oasis:entry>
         <oasis:entry colname="col3">–</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">27.6</oasis:entry>
         <oasis:entry colname="col7">9.6</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.02</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2</oasis:entry>
         <oasis:entry colname="col2">time average (3 h)</oasis:entry>
         <oasis:entry colname="col3">11.1</oasis:entry>
         <oasis:entry colname="col4">0.9</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M261" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.02</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">25.8</oasis:entry>
         <oasis:entry colname="col7">9.6</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M262" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.02</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3</oasis:entry>
         <oasis:entry colname="col2">time window 11:00–17:00/23:00–05:00 LMT</oasis:entry>
         <oasis:entry colname="col3">10.2</oasis:entry>
         <oasis:entry colname="col4">1.1</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.48</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">23.5</oasis:entry>
         <oasis:entry colname="col7">9.8</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M264" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.48</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">4</oasis:entry>
         <oasis:entry colname="col2">minimal wind speed <inline-formula><mml:math id="M265" display="inline"><mml:mn mathvariant="normal">2</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M266" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">9.6</oasis:entry>
         <oasis:entry colname="col4">1.0</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M267" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.30</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">22.4</oasis:entry>
         <oasis:entry colname="col7">9.7</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M268" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.30</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">5</oasis:entry>
         <oasis:entry colname="col2">exclude extreme deviations</oasis:entry>
         <oasis:entry colname="col3">9.6</oasis:entry>
         <oasis:entry colname="col4">1.0</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M269" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.30</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">21.5</oasis:entry>
         <oasis:entry colname="col7">9.4</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M270" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.29</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">6</oasis:entry>
         <oasis:entry colname="col2">far-field correction</oasis:entry>
         <oasis:entry colname="col3">9.0</oasis:entry>
         <oasis:entry colname="col4">0.9</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.30</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">19.4</oasis:entry>
         <oasis:entry colname="col7">7.2</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.29</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">7</oasis:entry>
         <oasis:entry colname="col2">weight by inverse uncertainty</oasis:entry>
         <oasis:entry colname="col3">7.1, 6.9, 6.9</oasis:entry>
         <oasis:entry colname="col4">0.7, 0.8, 0.8</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M273" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.30</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">14.4, 16.6, 16.6</oasis:entry>
         <oasis:entry colname="col7">5.7, 6.6, 6.6</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.29</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">8</oasis:entry>
         <oasis:entry colname="col2">inversion (posterior)</oasis:entry>
         <oasis:entry colname="col3">6.9, 6.8, 6.8</oasis:entry>
         <oasis:entry colname="col4">0.6, 0.8, 0.6</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M275" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.30</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">12.4, 14.2, 14.0</oasis:entry>
         <oasis:entry colname="col7">2.5, 3.4, 3.0</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M276" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.29</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <fig id="F3"><label>Figure 3</label><caption><p id="d2e5049">Weighting function for time interpolation of model and observations. For example, an interpolated model point at 16:30 UTC averages over all model output between 15:30 and 17:30 UTC with full weight and another 1 h with linearly decreasing relative weight. The model yields instantaneous values every 15 min, whereas observations are provided as hourly averages, three of which contribute to the observational time average. Reference times are those times for which observations are available.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025-f03.png"/>

        </fig>

      <p id="d2e5058">In the next steps, we filter the data by time in order to keep only observations expected to be representative for large regions. Observations within the planetary boundary layer are most representative in the afternoon hours whereas measurements at high mountains are less influenced by very local fluxes at night time. Inversions therefore commonly use afternoon observations for flat land stations and night times at mountain sites <xref ref-type="bibr" rid="bib1.bibx4 bib1.bibx45" id="paren.52"/>. We use the time windows 23:00 to 05:00 LMT (local mean time) for stations on high mountains and 11:00 to 17:00 LMT for all other stations.</p>
      <p id="d2e5064">We furthermore exclude times with no wind to avoid a strong influence of local emissions that are not resolved in the model, motivated by <xref ref-type="bibr" rid="bib1.bibx14" id="text.53"/>. All data points for which the model predicts a wind speed of <inline-formula><mml:math id="M277" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M278" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> are excluded, which improves the overall agreement of model and observations as shown in Table <xref ref-type="table" rid="T4"/> (step 4). Figure <xref ref-type="fig" rid="F4"/> shows that the RMSE indeed increases significantly at low wind speeds. This increase is partially captured by an increase of the ensemble spread, supporting the idea of an uncertainty estimate depending on wind speed as proposed by <xref ref-type="bibr" rid="bib1.bibx5" id="text.54"/>.</p>

      <fig id="F4"><label>Figure 4</label><caption><p id="d2e5108">Dependency of RMSE and proxies for the model uncertainty on wind speed (left axis). All data points from step 3 in Table <xref ref-type="table" rid="T4"/> were ordered by the model-predicted wind speed and split into 100 bins, each containing approximately 1500 data points. The blue line indicates the cumulative fraction of observations (right axis). The figure shows the RMSE difference of model and observation (black line), the mean ensemble spread multiplied by factor 4 (red line), and the mean a priori concentration due to categorized emissions (green line) for each of these bins. The ensemble spread is the standard deviation of the model prediction in the 12 ensemble members. It is a main contribution to our uncertainty estimate for the model–data mismatch in the prior <inline-formula><mml:math id="M279" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M280" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion. The signal of categorized emissions is used to estimate the uncertainty for the diagonal <inline-formula><mml:math id="M281" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> matrix. Much of the larger RMSE at low wind speed is well captured by the ensemble spread inflated by factor 4 and by the mean a priori emission signal. In the inversion, we discard data points with wind speeds below <inline-formula><mml:math id="M282" display="inline"><mml:mn mathvariant="normal">2</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M283" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> (gray vertical line).</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025-f04.png"/>

        </fig>

      <p id="d2e5166">In the last filtering step – step 5 in Table <xref ref-type="table" rid="T4"/> – we exclude data points with extreme mismatch between far-field corrected a priori and observations, where <inline-formula><mml:math id="M284" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:msub><mml:mo>)</mml:mo><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mtext>ff</mml:mtext></mml:msubsup><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M285" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>. Data points where <inline-formula><mml:math id="M286" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mtext>ff</mml:mtext></mml:msubsup><mml:mo>&lt;</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M287" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> are also discarded. Since no strong sinks of <inline-formula><mml:math id="M288" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are expected, the contribution of <inline-formula><mml:math id="M289" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from the lateral boundaries should not exceed the observations. Thus, an observation below the model-predicted far field indicates an error in this far field. Steps 6–8 in Table <xref ref-type="table" rid="T4"/> complete our processing chain by applying the far-field correction (Sect. <xref ref-type="sec" rid="Ch1.S2.SS3"/>), indicating the relevance of the model uncertainty (Sect. <xref ref-type="sec" rid="Ch1.S2.SS5"/> and <xref ref-type="sec" rid="Ch1.S2.SS6"/>), and finally using the inversion results.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Synthetic observation experiments</title>
      <p id="d2e5295">To test our setup and analyze biases, we use synthetic experiments in which observation data are replaced by model-generated pseudo-observations. These synthetic experiments use exactly the same setup and the same observation coordinates. Only the observation values are replaced by the simulation result of one of our 12 ensemble members. We thus obtain 12 separate datasets of pseudo-observations, in which a transport error is simulated by using the transport ensemble members. The true fluxes assumed for these synthetic experiments are identical to the prior fluxes. This allows us to estimate a bias and a random error in the posterior scaling factor. We will repeat this procedure with modified true fluxes in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>. An analysis of the sensitivity to random changes in the true fluxes is included in Part 2 <xref ref-type="bibr" rid="bib1.bibx6" id="paren.55"/>.</p>

      <fig id="F5" specific-use="star"><label>Figure 5</label><caption><p id="d2e5305">Overview of the inversion system including input data sources. Arrows indicate data streams. Dashed lines indicate data streams with small or negligible impact on the inversion results. Colored areas group the input data (top), the deterministic model run and data processing (left), and the ensemble model run including processing of the resulting data (right). Colored text boxes distinguish gridded fluxes (green), data in observation space (blue, matrices in purple), and data in the space of scaling factors (red). Observation data are included when working in observation space (not explicitly marked). At the end of the processing chain (bottom), the three methods for estimating <inline-formula><mml:math id="M290" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> lead to different scaling factors from which we can compute national emission estimates.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025-f05.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS5">
  <label>3.5</label><title>Summary and overview</title>
      <p id="d2e5329">We can now summarize the inversion method following the required data streams in Fig. <xref ref-type="fig" rid="F5"/>. After collecting the input data for the transport simulation (Sect. <xref ref-type="sec" rid="Ch1.S3.SS1"/> and <xref ref-type="sec" rid="Ch1.S3.SS2"/>, top of Fig. <xref ref-type="fig" rid="F5"/>), we prepare the inversion by categorizing the fluxes (Sect. <xref ref-type="sec" rid="Ch1.S2.SS1.SSS3"/>). The transport is simulated separately for the deterministic and ensemble run (Sect. <xref ref-type="sec" rid="Ch1.S2.SS1.SSS1"/>, white ellipses in Fig. <xref ref-type="fig" rid="F5"/>). Using observation data from the ICOS carbon portal and the simulation output, we compute model equivalents and filter these to ensure a high quality of the model predictions (Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>). The data from the deterministic run are used to construct a far-field correction to mitigate uncertainties in the boundary conditions (Sect. <xref ref-type="sec" rid="Ch1.S2.SS3"/>). The ensemble data are used to construct the uncertainty matrix <inline-formula><mml:math id="M291" display="inline"><mml:mrow><mml:mi mathvariant="bold">R</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> as required for the prior <inline-formula><mml:math id="M292" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M293" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion (Sect. <xref ref-type="sec" rid="Ch1.S2.SS5.SSS2"/>). The far-field corrected data and the <inline-formula><mml:math id="M294" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> matrix serve as input for the Bayesian inversion (Sect. <xref ref-type="sec" rid="Ch1.S2.SS4"/>). By combining the resulting posterior scaling factors with the categorized fluxes, we obtain posterior flux estimates.</p>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Results and discussion</title>
      <p id="d2e5400">In this section, we examine the presented inversion system using synthetic experiments and sensitivity tests. We start by considering synthetic observation experiments in which the synthetic truth is equal to the a priori fluxes. Figure <xref ref-type="fig" rid="F6"/> shows a statistical evaluation of inversion results for this case, which we analyze for multiple aspects.</p>

      <fig id="F6" specific-use="star"><label>Figure 6</label><caption><p id="d2e5407">Mean <bold>(a, c)</bold> and standard deviation <bold>(b, d)</bold> of monthly flux estimates relative to the prior in synthetic experiments for diagonal <inline-formula><mml:math id="M295" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> (blue), prior <inline-formula><mml:math id="M296" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> (orange), and posterior <inline-formula><mml:math id="M297" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion (green). Each bar represents the posterior fluxes for 144 inversions, obtained from 12 datasets of pseudo-observations, each covering 12 monthly time windows. Black horizontal lines indicate the <inline-formula><mml:math id="M298" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> statistical uncertainty estimate. Panels <bold>(a)</bold>, <bold>(c)</bold> show the bias as the relative deviation of the mean posterior from the prior, which is equal to the synthetic truth. The standard deviation <bold>(b, d)</bold> among the 144 emission estimates indicates the random error expected in each monthly inversion. Colored lines in <bold>(b)</bold>, <bold>(d)</bold> show the mean posterior <inline-formula><mml:math id="M299" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> uncertainty, which is similar for all three methods.</p></caption>
        <graphic xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025-f06.png"/>

      </fig>

<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Random error</title>
      <p id="d2e5487">In Fig. <xref ref-type="fig" rid="F6"/>, we see the bias (panels a and c) and random error (b and d) of the inversion results for selected countries or emission sources relative to the a priori emissions, distinguishing the three methods for constructing <inline-formula><mml:math id="M300" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>. The random error is estimated by the standard deviation obtained from 144 inversions and indicates the precision or reliability of these results for a single month. The comparison of the three methods shows that the prior <inline-formula><mml:math id="M301" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M302" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> method lead to a very similar random error, which is considerably lower than for the diagonal <inline-formula><mml:math id="M303" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> in all considered regions. This leads to the conclusion that using a transport ensemble to estimate uncertainties and their correlations can significantly reduce the random error in emission estimates, independent of the far-field correction.</p>
      <p id="d2e5520">Since the diagonal <inline-formula><mml:math id="M304" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> construction uses different tuning parameters than the prior <inline-formula><mml:math id="M305" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M306" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion, we need to make sure that the chosen configurations are comparable. This is achieved by aiming for a similar posterior uncertainty in all methods for constructing <inline-formula><mml:math id="M307" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>. Thin lines in Fig. <xref ref-type="fig" rid="F6"/>b and d show the posterior <inline-formula><mml:math id="M308" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> uncertainties to validate the similarity.</p>
      <p id="d2e5564">By comparing emission estimates without (panels a and b) and with the far-field correction (c and d), one can identify that the far-field correction changes the bias and slightly reduces the random error. Both effects are very similar for all three choices of <inline-formula><mml:math id="M309" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>. Since the far-field correction pulls the simulated prior concentrations towards the observations, we can expect that it brings the emission estimates closer to the prior. But we can see in Fig. <xref ref-type="fig" rid="F6"/>b and d that the resulting reduction in random error is only weak.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Inversion bias</title>
      <p id="d2e5585">The bias shown in Fig. <xref ref-type="fig" rid="F6"/>a and c clearly depends on the far-field correction. The pseudo-observations without far-field correction have a bias of <inline-formula><mml:math id="M310" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M311" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>. The far-field correction reverts this to a negative bias of <inline-formula><mml:math id="M312" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M313" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> due to a sampling bias as explained in Sect. <xref ref-type="sec" rid="Ch1.S2.SS3"/>. Ideally, we would therefore expect a small positive bias in Fig. <xref ref-type="fig" rid="F6"/>a and an equally strong negative bias in panel (c). But the bias differs depending on how <inline-formula><mml:math id="M314" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> is constructed.</p>
      <p id="d2e5638">For the diagonal <inline-formula><mml:math id="M315" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion, we see overall a positive bias for most regions. This approximation for <inline-formula><mml:math id="M316" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> assumes a large uncertainty if the model predicts a strong signal from emissions. For an imperfect transport model, this implies that the model will tend to have a higher uncertainty when it overestimates the concentration and a lower uncertainty when it underestimates the real emission signal. As the model is more confident when observations are higher than the model prediction, it will tend to overestimate the emissions.</p>
      <p id="d2e5655">For the prior <inline-formula><mml:math id="M317" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> approximation, we find a negative bias in the emission estimates in many regions. This may be due do the plume bias problem introduced in Sect. <xref ref-type="sec" rid="Ch1.S2.SS2"/>. For the Upper Silesian Coal Basin as a very strong and localized source, all methods show the expected negative bias. Notably, a considerable negative bias is also found for the Netherlands as a small country with high emission rates.</p>
      <p id="d2e5667">In the posterior <inline-formula><mml:math id="M318" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> approximation, the negative bias for plumes is reduced, but also all other emission estimates are higher compared to the prior <inline-formula><mml:math id="M319" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion. To understand this, we recall that a transport error in our model only leads to an error in the predicted <inline-formula><mml:math id="M320" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration if the concentration field contains spatial gradients. Such gradients are caused by emissions. Stronger emissions directly cause higher uncertainty estimates in the meteorological ensemble. In the posterior <inline-formula><mml:math id="M321" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion, the inversion can adjust the emissions of the transport ensemble and thereby change the uncertainties. As we optimize the agreement of model and observations relative to the uncertainties, the system will prefer larger uncertainties. Thus, the inversion will tend to overestimate emissions to reach higher uncertainties. This counteracts the negative plume bias, but it may also lead to a positive bias.</p>
      <p id="d2e5703">By combining bias and random error, we obtain the RMSE. For Germany, the monthly results with far-field correction show an RMSE between <inline-formula><mml:math id="M322" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.4</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> (posterior <inline-formula><mml:math id="M323" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>) and <inline-formula><mml:math id="M324" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.3</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> (diagonal <inline-formula><mml:math id="M325" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>). For yearly totals, this reduces to <inline-formula><mml:math id="M326" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.2</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> for posterior <inline-formula><mml:math id="M327" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M328" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.8</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> for diagonal <inline-formula><mml:math id="M329" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>, while the prior <inline-formula><mml:math id="M330" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion is dominated by the bias and has an RMSE of <inline-formula><mml:math id="M331" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.9</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>. This indicates that the simulated transport error in our synthetic experiments leads to an error of approximately <inline-formula><mml:math id="M332" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> on the German yearly total emission estimate. Overall, the posterior <inline-formula><mml:math id="M333" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion shows the best performance as it has a lower random error and only a small bias.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Sensitivity to increased true emissions</title>
      <p id="d2e5824">To test the sensitivity of the inversion to true fluxes, we repeat the synthetic experiments with an identical setup but different pseudo-observations. For these new pseudo-observations, we increase all anthropogenic emissions by <inline-formula><mml:math id="M334" display="inline"><mml:mrow><mml:mn mathvariant="normal">20</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>. The a priori emissions remain unchanged and are thus lower than the synthetic truth. The inversion results are summarized in Fig. <xref ref-type="fig" rid="F7"/>, which is analogous to Fig. <xref ref-type="fig" rid="F6"/>.</p>

      <fig id="F7" specific-use="star"><label>Figure 7</label><caption><p id="d2e5844">Mean <bold>(a, c)</bold> and standard deviation <bold>(b, d)</bold> of monthly flux estimates relative to the prior in synthetic experiments with <inline-formula><mml:math id="M335" display="inline"><mml:mrow><mml:mn mathvariant="normal">20</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> increased anthropogenic emissions in the synthetic truth for diagonal <inline-formula><mml:math id="M336" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> (blue), prior <inline-formula><mml:math id="M337" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> (orange), and posterior <inline-formula><mml:math id="M338" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion (green). In <bold>(a, c)</bold>, the a priori has value <inline-formula><mml:math id="M339" display="inline"><mml:mn mathvariant="normal">1.0</mml:mn></mml:math></inline-formula> and a black vertical line shows the synthetic truth. Bars connect the prior to the posterior. Like in Fig. <xref ref-type="fig" rid="F6"/>, each bar represents the posterior fluxes for 144 inversions, combining 12 months with 12 datasets of pseudo-observations. Horizontal lines show <inline-formula><mml:math id="M340" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> statistical uncertainties and colored lines in <bold>(b)</bold>, <bold>(d)</bold> indicate the posterior <inline-formula><mml:math id="M341" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> uncertainty.</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025-f07.png"/>

        </fig>

      <p id="d2e5931">Figure <xref ref-type="fig" rid="F7"/>a and c show the mean posterior (bars) compared to the synthetic truth (black vertical line). Without the far-field correction, the inversion is too sensitive in many regions, as it increases the emissions beyond the synthetic truth. This leads to an overestimation, which is likely due to the artificial lifetime of the flux category tracers (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS1.SSS4"/>). With the far-field correction (panel c), the deviation of the posterior from the prior is damped and we obtain a low bias compared to the truth, as expected when the a priori emissions are underestimated. The random error (b and d) remains similar to the case with perfect prior emissions, albeit a small increase can be seen (compare Fig. <xref ref-type="fig" rid="F6"/>). Like for the perfect prior emissions, the best performance with the lowest RMSE is found for the posterior <inline-formula><mml:math id="M342" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion.</p>
</sec>
<sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Sensitivity to bias and noise in observations</title>
      <p id="d2e5955">We now turn from the focus on the transport error to uncertainties in the observations. To this end, we consider different pseudo-observations without any transport error that follow scenarios defined in Fig. <xref ref-type="fig" rid="F8"/>. To avoid the transport error, we generate these pseudo-observations based on the deterministic model run. For simplicity, we only consider the average of prior <inline-formula><mml:math id="M343" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M344" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion.</p>

      <fig id="F8" specific-use="star"><label>Figure 8</label><caption><p id="d2e5976">Total posterior emissions in 2021 of selected countries and German sectors for synthetic experiments with perfect transport. Markers show the average of the emission estimates obtained from the prior <inline-formula><mml:math id="M345" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M346" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion. Thin horizontal lines indicate the synthetic truth. Vertical lines show uncertainties (<inline-formula><mml:math id="M347" display="inline"><mml:mrow><mml:mn mathvariant="normal">95</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> confidence intervals).</p></caption>
          <graphic xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025-f08.png"/>

        </fig>

      <p id="d2e6010">In the first scenarios, we shift all pseudo-observations by <inline-formula><mml:math id="M348" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M349" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> (case 01 in Fig. <xref ref-type="fig" rid="F8"/>) and <inline-formula><mml:math id="M350" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M351" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> (case 02). This bias is mostly compensated by the far-field correction with monthly averages of <inline-formula><mml:math id="M352" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.75</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M353" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.8</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M354" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>, the sign depends on the scenario. Because of this correction, the effect on the estimated German total emissions remains well within the posterior uncertainty. This is in stark contrast to the same scenarios without the far-field correction (cases 03 and 04) and demonstrates the benefits of the far-field correction.</p>
      <p id="d2e6081">We furthermore test the effect of correlated and uncorrelated Gaussian noise added to the observations (cases 10–12), finding that the effect on the posterior emissions is small compared to the posterior uncertainties. The correlated Gaussian noise is a three-dimensional Gaussian random field in flat (longitude, latitude, time) coordinates with a lower cutoff for fluctuations on scales <inline-formula><mml:math id="M355" display="inline"><mml:mrow><mml:mo>≲</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (horizontal) and <inline-formula><mml:math id="M356" display="inline"><mml:mrow><mml:mo>≲</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:math></inline-formula> d (time) such that it acts as a slowly varying random bias. The RMS of the noise is normalized to <inline-formula><mml:math id="M357" display="inline"><mml:mn mathvariant="normal">5</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M358" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>. For the last three test cases (20–22), we scale either the natural and LULUCF fluxes or all other emissions in the synthetic truth while leaving the a priori emissions unchanged. Overall, the emission estimates follow the change in the synthetic truth well as already found in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>.</p>
</sec>
<sec id="Ch1.S4.SS5">
  <label>4.5</label><title>Sensitivity to inversion parameters</title>
      <p id="d2e6131">Our inversion method has various tuning parameters. Above we have described the inversion and synthetic experiments for one choice of these parameters. We analyze the sensitivity to these parameters by repeating the inversion 50 times with real observations and modified parameters. Table <xref ref-type="table" rid="TE1a"/> lists these test cases with their ID, parameters, and influence on the inversion results. An overview of the national emission estimates for each test case is provided in Fig. <xref ref-type="fig" rid="FE1"/>. Here, we summarize the main results and refer to Table <xref ref-type="table" rid="TE1a"/> for details. We use the average of the prior <inline-formula><mml:math id="M359" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M360" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion results and focus on the influence of the parameters on the emission estimates, leaving the discussion of the inversion results for Part 2 <xref ref-type="bibr" rid="bib1.bibx6" id="paren.56"/>.</p>
<sec id="Ch1.S4.SS5.SSS1">
  <label>4.5.1</label><title>Comparison to observations</title>
      <p id="d2e6165">Before comparing model and observations, we apply multiple filtering steps that influence the inversion results considerably. Most prominently, selecting nighttime observations for high mountain stations and afternoon hours for other stations strongly affects the inversion and improves the model representativeness (case 201 in Table <xref ref-type="table" rid="TE1a"/>). This is one of only five sensitivity tests with posterior fluxes deviating from the reference case by <inline-formula><mml:math id="M361" display="inline"><mml:mrow><mml:mo>≳</mml:mo><mml:mn mathvariant="normal">30</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> of the posterior uncertainty, which we call a strong change in inversion results. Other filtering parameters such as the number of sampling heights used per station (case 202) and the minimal wind speed (cases 203–205) affect the inversion results noticeably, although changes are small compared to the uncertainties. Limiting the influence of outliers with model–observation mismatch <inline-formula><mml:math id="M362" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:msqrt><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:msqrt></mml:mrow></mml:math></inline-formula> by increasing their uncertainty (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS2"/>) has a considerable impact (cases 208, 209). Completely neglecting extreme outliers – defined by <inline-formula><mml:math id="M363" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:msub><mml:mo>)</mml:mo><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mtext>ff</mml:mtext></mml:msubsup><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M364" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M365" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mtext>ff</mml:mtext></mml:msubsup><mml:mo>&lt;</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M366" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> – has only a small effect (cases 206, 207).</p>
      <p id="d2e6301">The choice of observation sites is analyzed in cases 601 and 602, which select subsets of stations with good observation coverage over the full year. When using only 27 stations (case 602), the results change strongly compared to the reference case with 50 stations, also because some regions are hardly observed in case 602. Varying the elevation of high mountain stations has only little impact on the inversion results (case 100). The effect of time-averaging over <inline-formula><mml:math id="M367" display="inline"><mml:mn mathvariant="normal">3</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M368" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula> (as chosen in step 2 of Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>) is noticeable in the results, but small compared to the uncertainties (case 101).</p>
</sec>
<sec id="Ch1.S4.SS5.SSS2">
  <label>4.5.2</label><title>Uncertainty</title>
      <p id="d2e6330">The diagonal <inline-formula><mml:math id="M369" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion deviates from the reference case by one third of the posterior uncertainty (case 311). Also the construction of the error covariance matrix <inline-formula><mml:math id="M370" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> following Sects. <xref ref-type="sec" rid="Ch1.S2.SS5"/> and <xref ref-type="sec" rid="Ch1.S2.SS6"/> contains numerous tuning parameters. Key parameters are the overall uncertainty inflation factors <inline-formula><mml:math id="M371" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS3"/>, cases 302 and 303 in Table <xref ref-type="table" rid="TE1a"/>) and the uncorrelated additive uncertainty <inline-formula><mml:math id="M372" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>const</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (see Eq. <xref ref-type="disp-formula" rid="Ch1.E2"/>) of each data point (cases 309, 310). Variations of these parameters change the inversion results considerably. The tuning parameter <inline-formula><mml:math id="M373" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>const</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> illustrates the importance of hidden patterns in the considered data. Increasing to <inline-formula><mml:math id="M374" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>const</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M375" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> effectively reduces the weight of observations with a small ensemble-estimated transport uncertainty. As observations with strong emission signals and high transport uncertainty become more relevant, the emission estimate for Germany is increased by <inline-formula><mml:math id="M376" display="inline"><mml:mrow><mml:mn mathvariant="normal">5</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> (case 310 in Fig. <xref ref-type="fig" rid="FE1"/>).</p>
      <p id="d2e6428">Other important parameters are the correlation scales in the localization matrix <inline-formula><mml:math id="M377" display="inline"><mml:mi mathvariant="bold">C</mml:mi></mml:math></inline-formula> for the ensemble-based uncertainty estimate (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS5.SSS2"/>). The overall effect of these scales on the posterior scaling factors is small (cases 304–308), but these parameters also influence the posterior uncertainties. The sensitivity tests indicate that 12 ensemble members are sufficient to estimate the uncertainties and correlations even without a strong localization. In general, we expect that a larger transport ensemble will yield better statistical estimates for uncertainties and their correlations. This reduces the need for a localization which suppresses spurious correlations. The considered additional plume localization uncertainty (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS1"/>, cases 300 and 301) arising from the Upper Silesian Coal Basin seems negligible when considering the full domain. However, the additional plume localization uncertainty reduces the negative bias for the plume emissions that was discussed in Sect. <xref ref-type="sec" rid="Ch1.S2.SS2"/>.</p>
</sec>
<sec id="Ch1.S4.SS5.SSS3">
  <label>4.5.3</label><title>Far-field correction</title>
      <p id="d2e6452">The synthetic experiments already showed that the far-field correction introduced in Sect. <xref ref-type="sec" rid="Ch1.S2.SS3"/> influences the results considerably (see Figs. <xref ref-type="fig" rid="F6"/> and <xref ref-type="fig" rid="F7"/>). When using real observations, removing the correction field leads to strong changes in the inversion results (case 400), albeit the results remain within the posterior uncertainty bounds. Without the correction, the scaling factors for some natural fluxes in Scandinavia even become negative for some months – a clearly unrealistic result that underlines the importance of the far-field correction. However, changing various tuning parameters of the far-field correction within a reasonable range has much smaller effects. The selection of data points used for the far-field correction (cases 409, 410) and the overall correction strength (cases 401, 402) have modest influence, whereas correlation scales in the correction play a minor role (cases 403–408). The additional uncertainty added to <inline-formula><mml:math id="M378" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> due to the far-field correction (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS4"/>) has little influence on the inversion results (cases 412–414).</p>
</sec>
<sec id="Ch1.S4.SS5.SSS4">
  <label>4.5.4</label><title>A priori error covariance matrix</title>
      <p id="d2e6479">Modifying the a priori uncertainty or correlations of the scaling factors (<inline-formula><mml:math id="M379" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula> in Eq. <xref ref-type="disp-formula" rid="Ch1.E1"/>) changes the results quantitatively, but not qualitatively (cases 500–502). A coarser spatial resolution in Germany (case 504) and different choices of sectors (cases 503, 506) yield aggregated German sector emissions that agree well with the reference case.</p>
</sec>
<sec id="Ch1.S4.SS5.SSS5">
  <label>4.5.5</label><title>Inversion time windows</title>
      <p id="d2e6499">In the reference case, we considered each month independently. Increasing the inversion time windows to 3 months has a considerable influence on the results (case 702). As the inversion time window increases, the overall weight of the observations in the inversion also increases. Thus, posterior uncertainties are reduced and the deviations between posterior and prior are amplified.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusions</title>
      <p id="d2e6513">This study introduced a new flux inversion system that explores the potential of a transport ensemble from NWP for observation-based regional estimation of methane emissions. In experiments with pseudo-observations and simulated transport error, we found that using a transport ensemble can substantially reduce the random error of the flux estimates compared to a simple baseline scenario (“diagonal <inline-formula><mml:math id="M380" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>”). This is in line with findings by <xref ref-type="bibr" rid="bib1.bibx16" id="text.57"/> and by <xref ref-type="bibr" rid="bib1.bibx44" id="text.58"/>, who estimated <inline-formula><mml:math id="M381" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emissions in Europe using an ensemble Kalman smoother. But in contrast to <xref ref-type="bibr" rid="bib1.bibx16" id="text.59"/>, who studied <inline-formula><mml:math id="M382" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> at urban scale using an ensemble transform Kalman filter, we identified no significant improvement in the bias of the emission estimates. Instead, our results indicate systematic biases depending on the emissions characteristics. Most notably, localized sources causing strong plumes can be underestimation by <inline-formula><mml:math id="M383" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> by our synthesis inversion. To benefit from the transport ensemble and to reduce such biases, we proposed to use the posterior concentrations in the ensemble when constructing <inline-formula><mml:math id="M384" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>. This posterior <inline-formula><mml:math id="M385" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion showed the best performance in the synthetic experiments. Overall, we expect an error of <inline-formula><mml:math id="M386" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> for the total German <inline-formula><mml:math id="M387" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emissions in 2021 in our inversion system due to random transport errors.</p>
      <p id="d2e6602">When applying our regional inversion system to real observations, we face the challenge of uncertain <inline-formula><mml:math id="M388" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations at the lateral boundaries. Different approaches exist to correct biased boundary conditions. In some cases, selected measurements can provide a baseline <xref ref-type="bibr" rid="bib1.bibx27" id="paren.60"/>. At national or continental scale, a coarse discretization of the boundaries allows optimization along with the emissions <xref ref-type="bibr" rid="bib1.bibx14 bib1.bibx45" id="paren.61"/>. Here, we followed a different path by adding a smooth correction field for the simulated concentrations. This allowed us to use different time scales for the inversion and the far-field correction. The far-field correction causes a small bias towards the prior fluxes, but without the correction we expect errors from wrongly projecting any boundary bias onto the fluxes. We demonstrated the potential of the far-field correction using biased pseudo-observations and analyzed its importance in sensitivity tests, for which we repeated the inversion with different tuning parameters. These tests with real observations show that switch on the far-field correction changes the results considerably within the uncertainty ranges, but the specific choices made in constructing the correction field have only minor or moderate effects. Also other tested changes in tuning parameters only lead to variations of the full-year flux estimates well within the uncertainty ranges, indicating that we found robust settings for our application. This establishes a basis for applying our system to validate the German emission inventory in Part 2 <xref ref-type="bibr" rid="bib1.bibx6" id="paren.62"/>.</p>
      <p id="d2e6625">The presented novel inversion system leverages the potential of the ICON–ART model and the ensemble modeling capabilities from operational NWP for national scale estimation of <inline-formula><mml:math id="M389" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes. It is tailored to the validation of national inventories by using high-resolution a priori emission estimates from national reporting and allowing for distinguishing emission sectors, as will be discussed in detail in Part 2. With synthetic experiments and sensitivity tests we demonstrated the suitability for estimating national <inline-formula><mml:math id="M390" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emissions.</p>
</sec>

      
      </body>
    <back><app-group>

<app id="App1.Ch1.S1">
  <label>Appendix A</label><title>Formal definition of far-field correction</title>
      <p id="d2e6661">This appendix provides details for the far-field correction introduced in Sect. <xref ref-type="sec" rid="Ch1.S2.SS3"/>. We correct the computed far field by a smooth field that is determined using all data points where the cumulated signal of all flux categories is at most <inline-formula><mml:math id="M391" display="inline"><mml:mn mathvariant="normal">20</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M392" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>, the total concentration due to all fluxes in the domain – including natural and uncategorized fluxes – is at most <inline-formula><mml:math id="M393" display="inline"><mml:mn mathvariant="normal">50</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M394" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>, and natural plus LULUCF fluxes contribute at most <inline-formula><mml:math id="M395" display="inline"><mml:mn mathvariant="normal">20</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M396" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>. These criteria aim to select only measurements of sufficiently clean air for the far-field correction.</p>
      <p id="d2e6712">The far-field correction is realized as a Kalman smoother on the selected data points. For simplicity, we only provide the definition of the correction at the observation coordinates. Consider the vector of all model predictions <inline-formula><mml:math id="M397" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula>, which is aligned with the observation vector <inline-formula><mml:math id="M398" display="inline"><mml:mi mathvariant="bold-italic">y</mml:mi></mml:math></inline-formula>. By <inline-formula><mml:math id="M399" display="inline"><mml:mi mathvariant="bold">P</mml:mi></mml:math></inline-formula> we denote the projector selecting those data points that shall be used to determine the far-field correction. We aim to find a correction vector <inline-formula><mml:math id="M400" display="inline"><mml:mi mathvariant="bold-italic">c</mml:mi></mml:math></inline-formula> aligned with <inline-formula><mml:math id="M401" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M402" display="inline"><mml:mi mathvariant="bold-italic">y</mml:mi></mml:math></inline-formula> that minimizes

          <disp-formula id="App1.Ch1.S1.E3" content-type="numbered"><label>A1</label><mml:math id="M403" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:munder><mml:mtext>arg min</mml:mtext><mml:mi mathvariant="bold-italic">c</mml:mi></mml:munder><mml:mo mathvariant="italic" mathsize="1.1em">{</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mo mathsize="1.1em">(</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:msup><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mo mathsize="1.1em">(</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo mathsize="1.1em" mathvariant="italic">}</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

        where <inline-formula><mml:math id="M404" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mn mathvariant="normal">16</mml:mn><mml:mi mathvariant="bold">I</mml:mi></mml:mrow></mml:math></inline-formula> is a diagonal matrix and <inline-formula><mml:math id="M405" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:math></inline-formula> a Gaussian localization matrix with standard deviations <inline-formula><mml:math id="M406" display="inline"><mml:mn mathvariant="normal">16</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M407" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula> (time), <inline-formula><mml:math id="M408" display="inline"><mml:mn mathvariant="normal">319</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M409" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> (horizontal) and <inline-formula><mml:math id="M410" display="inline"><mml:mn mathvariant="normal">1</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M411" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> (vertical), normalize to <inline-formula><mml:math id="M412" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> for all <inline-formula><mml:math id="M413" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>. The matrix <inline-formula><mml:math id="M414" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:math></inline-formula> ensures that the correction field <inline-formula><mml:math id="M415" display="inline"><mml:mi mathvariant="bold-italic">c</mml:mi></mml:math></inline-formula> is smooth on these scales. For the under-determined Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E3"/>) we use the solution

          <disp-formula id="App1.Ch1.S1.E4" content-type="numbered"><label>A2</label><mml:math id="M416" display="block"><mml:mrow><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mo mathsize="1.1em">[</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">]</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

        This only defines <inline-formula><mml:math id="M417" display="inline"><mml:mi mathvariant="bold-italic">c</mml:mi></mml:math></inline-formula> at the observations, but we can generalize Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E4"/>) to arbitrary locations and times by including these coordinates in <inline-formula><mml:math id="M418" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:math></inline-formula>. Formally, this then defines a smooth field.</p>
      <p id="d2e7107">To prove that Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E4"/>) is one possible – albeit not unique – solution of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E3"/>), we use that Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E3"/>) is a quadratic form and compute its gradient with respect to <inline-formula><mml:math id="M419" display="inline"><mml:mi mathvariant="bold-italic">c</mml:mi></mml:math></inline-formula>:

          <disp-formula id="App1.Ch1.S1.E5" content-type="numbered"><label>A3</label><mml:math id="M420" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mover><mml:mo>=</mml:mo><mml:mo>!</mml:mo></mml:mover></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mo mathsize="1.1em">(</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mo mathsize="1.1em">(</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

        Since <inline-formula><mml:math id="M421" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">PP</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> has full rank, this implies that

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M422" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mn mathvariant="normal">0</mml:mn><mml:mover><mml:mo>=</mml:mo><mml:mo>!</mml:mo></mml:mover></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo mathsize="1.1em">[</mml:mo><mml:mo mathsize="1.1em">(</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>+</mml:mo><mml:mo mathsize="1.1em">(</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo mathsize="1.1em">]</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mi mathvariant="bold-italic">c</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.S1.E6"><mml:mtd><mml:mtext>A4</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>+</mml:mo><mml:mo mathsize="1.1em">(</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S1.E7"><mml:mtd><mml:mtext>A5</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>⟹</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo mathsize="1.1em">[</mml:mo><mml:mn mathvariant="bold">1</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mo mathsize="1.1em">(</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:msup><mml:mo mathsize="1.1em">]</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S1.E8"><mml:mtd><mml:mtext>A6</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mo mathsize="1.1em">[</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">]</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

        It follows that Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E4"/>) is a solution of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E3"/>) that is independent of the non-selected data points. One can furthermore show that Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E4"/>) is optimal in the sense that it minimizes <inline-formula><mml:math id="M423" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold-italic">c</mml:mi></mml:mrow></mml:math></inline-formula> under constraint that <inline-formula><mml:math id="M424" display="inline"><mml:mi mathvariant="bold-italic">c</mml:mi></mml:math></inline-formula> is a solution of Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E3"/>). Thus, this solution is as close as possible to zero under the constraint of smoothness (quantified by <inline-formula><mml:math id="M425" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:math></inline-formula>). By defining <inline-formula><mml:math id="M426" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo>=</mml:mo><mml:mo>[</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo>]</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and introducing Lagrange multipliers <inline-formula><mml:math id="M427" display="inline"><mml:mi mathvariant="bold-italic">λ</mml:mi></mml:math></inline-formula>, we obtain

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M428" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">λ</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.S1.E9"><mml:mtd><mml:mtext>A7</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>f</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>f</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">λ</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S1.E10"><mml:mtd><mml:mtext>A8</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="bold-italic">c</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">λ</mml:mi><mml:mtext mathvariant="normal">from </mml:mtext><mml:msub><mml:mo>∂</mml:mo><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">λ</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S1.E11"><mml:mtd><mml:mtext>A9</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="bold">P</mml:mi><mml:mi mathvariant="bold-italic">c</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mtext mathvariant="normal">from </mml:mtext><mml:msub><mml:mo>∂</mml:mo><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">λ</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:msub><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">λ</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

        Since <inline-formula><mml:math id="M429" display="inline"><mml:mrow><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> has full rank, combining Eqs. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E10"/>) and (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E11"/>) implies that <inline-formula><mml:math id="M430" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">λ</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="bold-italic">ξ</mml:mi></mml:mrow></mml:math></inline-formula> and thereby <inline-formula><mml:math id="M431" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">ξ</mml:mi></mml:mrow></mml:math></inline-formula> is the unique solution of the optimization problem <inline-formula><mml:math id="M432" display="inline"><mml:mrow><mml:msub><mml:mtext>arg min</mml:mtext><mml:mi mathvariant="bold-italic">c</mml:mi></mml:msub><mml:mi>f</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> under the constraint that <inline-formula><mml:math id="M433" display="inline"><mml:mrow><mml:mi mathvariant="bold">P</mml:mi><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="bold">P</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:msup><mml:mi mathvariant="bold">P</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">ξ</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
</app>

<app id="App1.Ch1.S2">
  <label>Appendix B</label><title>Posterior <inline-formula><mml:math id="M434" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> with reduced ensemble</title>
      <p id="d2e7996">When using a priori scaling factors to estimate the model uncertainty in <inline-formula><mml:math id="M435" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>, we need only the total concentration <inline-formula><mml:math id="M436" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> for each ensemble member <inline-formula><mml:math id="M437" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> and each observation <inline-formula><mml:math id="M438" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>, where <inline-formula><mml:math id="M439" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> is known. Thus, only a single tracer field is required in the ensemble transport simulation. To compute <inline-formula><mml:math id="M440" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> for arbitrary <inline-formula><mml:math id="M441" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mn mathvariant="normal">46</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, the flux categories need to be distinguished for each ensemble member, resulting in <inline-formula><mml:math id="M442" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> tracer fields in the ensemble simulation. To avoid wasting numerical resources, we chose to approximate <inline-formula><mml:math id="M443" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> by only a few tracer fields, using additional information from the deterministic model run which distinguishes all tracer fields.</p>
      <p id="d2e8117">From the deterministic model run, we know the operator <inline-formula><mml:math id="M444" display="inline"><mml:mi mathvariant="bold">H</mml:mi></mml:math></inline-formula> mapping scaling factors <inline-formula><mml:math id="M445" display="inline"><mml:mi mathvariant="bold-italic">s</mml:mi></mml:math></inline-formula> to a model prediction <inline-formula><mml:math id="M446" display="inline"><mml:mrow><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> for the concentrations. For ensemble member <inline-formula><mml:math id="M447" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula>, we would ideally know <inline-formula><mml:math id="M448" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mi>m</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M449" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mrow><mml:mtext>ff</mml:mtext><mml:mo>,</mml:mo><mml:mi>m</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> to compute a model prediction <inline-formula><mml:math id="M450" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mi>m</mml:mi></mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mrow><mml:mtext>ff</mml:mtext><mml:mo>,</mml:mo><mml:mi>m</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>. In lack of computational resources to compute <inline-formula><mml:math id="M451" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mi>m</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> for every ensemble member, we combine information from the deterministic run (<inline-formula><mml:math id="M452" display="inline"><mml:mi mathvariant="bold">H</mml:mi></mml:math></inline-formula>) and selected tracers for the ensemble run to approximate <inline-formula><mml:math id="M453" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mi>m</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>. We group the flux categories into groups <inline-formula><mml:math id="M454" display="inline"><mml:mrow><mml:mo mathvariant="italic">{</mml:mo><mml:mi>g</mml:mi><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula> and denote by <inline-formula><mml:math id="M455" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">P</mml:mi><mml:mi>g</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the projector of scaling vectors <inline-formula><mml:math id="M456" display="inline"><mml:mi mathvariant="bold-italic">s</mml:mi></mml:math></inline-formula> on the subspace spanned by the flux categories in group <inline-formula><mml:math id="M457" display="inline"><mml:mi>g</mml:mi></mml:math></inline-formula>. In the ensemble members, we compute the total concentration from group <inline-formula><mml:math id="M458" display="inline"><mml:mi>g</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M459" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mtext>mg</mml:mtext></mml:msubsup><mml:mo>=</mml:mo><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mi>m</mml:mi></mml:msup><mml:msub><mml:mi mathvariant="bold">P</mml:mi><mml:mi>g</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula>. We distribute the 46 flux categories to only three groups and thereby reduce the computational effort considerably. To estimate the full dependence on the scaling factors in the ensemble, we approximate:

          <disp-formula id="App1.Ch1.S2.E12" content-type="numbered"><label>B1</label><mml:math id="M460" display="block"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mi>m</mml:mi></mml:msubsup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo><mml:mo>≈</mml:mo><mml:munder><mml:mo movablelimits="false">∑</mml:mo><mml:mi>g</mml:mi></mml:munder><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold">HP</mml:mi><mml:mi>g</mml:mi></mml:msub><mml:mi mathvariant="bold-italic">s</mml:mi><mml:msub><mml:mo>)</mml:mo><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo mathsize="1.1em">(</mml:mo><mml:msub><mml:mi mathvariant="bold">HP</mml:mi><mml:mi>g</mml:mi></mml:msub><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:msub><mml:mo mathsize="1.1em">)</mml:mo><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mtext>mg</mml:mtext></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mrow><mml:mtext>ff</mml:mtext><mml:mo>,</mml:mo><mml:mi>m</mml:mi></mml:mrow></mml:msubsup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

        Thus, we compute the transport ensemble for a few tracer groups and estimate <inline-formula><mml:math id="M461" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>m</mml:mi></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> for arbitrary <inline-formula><mml:math id="M462" display="inline"><mml:mi mathvariant="bold-italic">s</mml:mi></mml:math></inline-formula> by using the ratios of tracer fields within the tracer groups from the deterministic run. Using the approximation in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E12"/>), we estimate the posterior model uncertainties with only five tracer fields in an ensemble of 12 transport simulations: <list list-type="order"><list-item>
      <p id="d2e8428">far field (initial and lateral boundary conditions)</p></list-item><list-item>
      <p id="d2e8432">total anthropogenic fluxes</p></list-item><list-item>
      <p id="d2e8436">total natural fluxes</p></list-item><list-item>
      <p id="d2e8440">total anthropogenic fluxes from Germany with lifetime 5 d</p></list-item><list-item>
      <p id="d2e8444">total anthropogenic fluxes from outside Germany with lifetime 5 d</p></list-item></list></p>
</app>

<app id="App1.Ch1.S3">
  <label>Appendix C</label><title>Observation sites</title>

<table-wrap id="TC1a"><label>Table C1</label><caption><p id="d2e8460">Observation stations from the European Obspack <xref ref-type="bibr" rid="bib1.bibx20" id="paren.63"/>. Column 6 (“mountain”) characterizes the stations as high mountains, small mountains, and other stations. This serves as a reference for computing the station height in the model and for the daily time window. We indicate the sampling heights used in the inversion (column 7) and mark those sampling heights with an asterisk that have good observation coverage in each month (used in sensitivity test 602). Column 8 indicates times in which the station was excluded due to modeling problems. Column 9 (“inflation”) defines the factor <inline-formula><mml:math id="M463" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> of the static uncertainty inflation (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS3"/>).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="9">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="90pt"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="left"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Code</oasis:entry>
         <oasis:entry colname="col2" align="left">Name</oasis:entry>
         <oasis:entry colname="col3">Country</oasis:entry>
         <oasis:entry colname="col4">ICOS</oasis:entry>
         <oasis:entry colname="col5">Elevation</oasis:entry>
         <oasis:entry colname="col6">Mountain</oasis:entry>
         <oasis:entry colname="col7">Sampling heights</oasis:entry>
         <oasis:entry colname="col8">Limitations</oasis:entry>
         <oasis:entry colname="col9">Inflation</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2" align="left"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">class</oasis:entry>
         <oasis:entry colname="col5">(m)</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">(m)</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">BIK</oasis:entry>
         <oasis:entry colname="col2" align="left">Białystok</oasis:entry>
         <oasis:entry colname="col3">PL</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">183</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">90, 180, 300</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BIR</oasis:entry>
         <oasis:entry colname="col2" align="left">Birkenes</oasis:entry>
         <oasis:entry colname="col3">NO</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">219</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">75</oasis:entry>
         <oasis:entry colname="col8">excl. Apr–Aug</oasis:entry>
         <oasis:entry colname="col9">3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BIS</oasis:entry>
         <oasis:entry colname="col2" align="left">Biscarrosse</oasis:entry>
         <oasis:entry colname="col3">FR</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">73</oasis:entry>
         <oasis:entry colname="col6">small</oasis:entry>
         <oasis:entry colname="col7">47<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BRM</oasis:entry>
         <oasis:entry colname="col2" align="left">Beromunster</oasis:entry>
         <oasis:entry colname="col3">CH</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">797</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">72, 132, 212</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">BSD</oasis:entry>
         <oasis:entry colname="col2" align="left">Bilsdale</oasis:entry>
         <oasis:entry colname="col3">UK</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">382</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">108, 248</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CBW</oasis:entry>
         <oasis:entry colname="col2" align="left">Cabauw</oasis:entry>
         <oasis:entry colname="col3">NL</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">0</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">67, 127<sup>∗</sup>, 207<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CMN</oasis:entry>
         <oasis:entry colname="col2" align="left">Monte Cimone</oasis:entry>
         <oasis:entry colname="col3">IT</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">2165</oasis:entry>
         <oasis:entry colname="col6">high</oasis:entry>
         <oasis:entry colname="col7">8</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CRA</oasis:entry>
         <oasis:entry colname="col2" align="left">Centre de Recherches Atmosphériques</oasis:entry>
         <oasis:entry colname="col3">FR</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">600</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">60<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CRP</oasis:entry>
         <oasis:entry colname="col2" align="left">Carnsore Point</oasis:entry>
         <oasis:entry colname="col3">IE</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">9</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">14</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ERS</oasis:entry>
         <oasis:entry colname="col2" align="left">Ersa</oasis:entry>
         <oasis:entry colname="col3">FR</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">533</oasis:entry>
         <oasis:entry colname="col6">small</oasis:entry>
         <oasis:entry colname="col7">40</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">FKL</oasis:entry>
         <oasis:entry colname="col2" align="left">Finokalia</oasis:entry>
         <oasis:entry colname="col3">GR</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">250</oasis:entry>
         <oasis:entry colname="col6">small</oasis:entry>
         <oasis:entry colname="col7">–</oasis:entry>
         <oasis:entry colname="col8">excluded</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">GAT</oasis:entry>
         <oasis:entry colname="col2" align="left">Gartow</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">70</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">132<sup>∗</sup>, 216<sup>∗</sup>, 341<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HEI</oasis:entry>
         <oasis:entry colname="col2" align="left">Heidelberg</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">113</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">30<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HEL</oasis:entry>
         <oasis:entry colname="col2" align="left">Helgoland</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">43</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">110<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HPB</oasis:entry>
         <oasis:entry colname="col2" align="left">Hohenpeissenberg</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">934</oasis:entry>
         <oasis:entry colname="col6">small</oasis:entry>
         <oasis:entry colname="col7">50, 93<sup>∗</sup>, 131<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HTM</oasis:entry>
         <oasis:entry colname="col2" align="left">Hyltemossa</oasis:entry>
         <oasis:entry colname="col3">SE</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">115</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">70, 150</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">HUN</oasis:entry>
         <oasis:entry colname="col2" align="left">Hegyhátsál</oasis:entry>
         <oasis:entry colname="col3">HU</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">248</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">82, 115</oasis:entry>
         <oasis:entry colname="col8">incl. Mar–Oct</oasis:entry>
         <oasis:entry colname="col9">3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">IPR</oasis:entry>
         <oasis:entry colname="col2" align="left">Ispra</oasis:entry>
         <oasis:entry colname="col3">IT</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">210</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">–</oasis:entry>
         <oasis:entry colname="col8">excluded</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">JFJ</oasis:entry>
         <oasis:entry colname="col2" align="left">Jungfraujoch</oasis:entry>
         <oasis:entry colname="col3">CH</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">3571.8</oasis:entry>
         <oasis:entry colname="col6">high</oasis:entry>
         <oasis:entry colname="col7">13.9</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">JUE</oasis:entry>
         <oasis:entry colname="col2" align="left">Jülich</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">98</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">120<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">KAS</oasis:entry>
         <oasis:entry colname="col2" align="left">Kasprowy Wierch</oasis:entry>
         <oasis:entry colname="col3">PL</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">1987</oasis:entry>
         <oasis:entry colname="col6">high</oasis:entry>
         <oasis:entry colname="col7">7<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">KIT</oasis:entry>
         <oasis:entry colname="col2" align="left">Karlsruhe</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">110</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">60<sup>∗</sup>, 100<sup>∗</sup>, 200<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">KRE</oasis:entry>
         <oasis:entry colname="col2" align="left">Křešín u Pacova</oasis:entry>
         <oasis:entry colname="col3">CZ</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">534</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">50, 125, 250</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">LHW</oasis:entry>
         <oasis:entry colname="col2" align="left">Laegern-Hochwacht</oasis:entry>
         <oasis:entry colname="col3">CH</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">840</oasis:entry>
         <oasis:entry colname="col6">small</oasis:entry>
         <oasis:entry colname="col7">32</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">LIN</oasis:entry>
         <oasis:entry colname="col2" align="left">Lindenberg</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">73</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">98</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">LMP</oasis:entry>
         <oasis:entry colname="col2" align="left">Lampedusa</oasis:entry>
         <oasis:entry colname="col3">IT</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">45</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">–</oasis:entry>
         <oasis:entry colname="col8">excluded</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">LMU</oasis:entry>
         <oasis:entry colname="col2" align="left">La Muela</oasis:entry>
         <oasis:entry colname="col3">ES</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">571</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">79</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">LUT</oasis:entry>
         <oasis:entry colname="col2" align="left">Lutjewad</oasis:entry>
         <oasis:entry colname="col3">NL</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">1</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">60</oasis:entry>
         <oasis:entry colname="col8">excl. Nov–Dec</oasis:entry>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MHD</oasis:entry>
         <oasis:entry colname="col2" align="left">Mace Head</oasis:entry>
         <oasis:entry colname="col3">IE</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">5</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">24<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MLH</oasis:entry>
         <oasis:entry colname="col2" align="left">Malin Head</oasis:entry>
         <oasis:entry colname="col3">IE</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">22</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">47</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">NOR</oasis:entry>
         <oasis:entry colname="col2" align="left">Norunda</oasis:entry>
         <oasis:entry colname="col3">SE</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">46</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">58<sup>∗</sup>, 100<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">OHP</oasis:entry>
         <oasis:entry colname="col2" align="left">Observatoire de Haute Provence</oasis:entry>
         <oasis:entry colname="col3">FR</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">650</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">50, 100</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">OPE</oasis:entry>
         <oasis:entry colname="col2" align="left">Observatoire pérenne de l'environnement</oasis:entry>
         <oasis:entry colname="col3">FR</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">390</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">50<sup>∗</sup>, 120<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">OXK</oasis:entry>
         <oasis:entry colname="col2" align="left">Ochsenkopf</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">1022</oasis:entry>
         <oasis:entry colname="col6">small</oasis:entry>
         <oasis:entry colname="col7">90, 163</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">PAL</oasis:entry>
         <oasis:entry colname="col2" align="left">Pallas</oasis:entry>
         <oasis:entry colname="col3">FI</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">565</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">12<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">PDM</oasis:entry>
         <oasis:entry colname="col2" align="left">Pic du Midi</oasis:entry>
         <oasis:entry colname="col3">FR</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">2877</oasis:entry>
         <oasis:entry colname="col6">high</oasis:entry>
         <oasis:entry colname="col7">28</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">PRS</oasis:entry>
         <oasis:entry colname="col2" align="left">Plateau Rosa</oasis:entry>
         <oasis:entry colname="col3">IT</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">3480</oasis:entry>
         <oasis:entry colname="col6">high</oasis:entry>
         <oasis:entry colname="col7">10</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">PUI</oasis:entry>
         <oasis:entry colname="col2" align="left">Puijo</oasis:entry>
         <oasis:entry colname="col3">FI</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">232</oasis:entry>
         <oasis:entry colname="col6">small</oasis:entry>
         <oasis:entry colname="col7">84<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">PUY</oasis:entry>
         <oasis:entry colname="col2" align="left">Puy de Dôme</oasis:entry>
         <oasis:entry colname="col3">FR</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">1465</oasis:entry>
         <oasis:entry colname="col6">small</oasis:entry>
         <oasis:entry colname="col7">10<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">RGL</oasis:entry>
         <oasis:entry colname="col2" align="left">Ridge Hill</oasis:entry>
         <oasis:entry colname="col3">UK</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">207</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">90<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ROC</oasis:entry>
         <oasis:entry colname="col2" align="left">Roc'h Trédudon</oasis:entry>
         <oasis:entry colname="col3">FR</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">362</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">25, 80, 140</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SAC</oasis:entry>
         <oasis:entry colname="col2" align="left">Saclay</oasis:entry>
         <oasis:entry colname="col3">FR</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">160</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">60<sup>∗</sup>, 100<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SMR</oasis:entry>
         <oasis:entry colname="col2" align="left">Hyytiälä</oasis:entry>
         <oasis:entry colname="col3">FI</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">181</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">67.2<sup>∗</sup>, 125<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SSL</oasis:entry>
         <oasis:entry colname="col2" align="left">Schauinsland</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">1205</oasis:entry>
         <oasis:entry colname="col6">small</oasis:entry>
         <oasis:entry colname="col7">12, 35</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<table-wrap id="TC1b"><label>Table C1</label><caption><p id="d2e10146">Continued.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="9">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="90pt"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="left"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Code</oasis:entry>
         <oasis:entry colname="col2" align="left">Name</oasis:entry>
         <oasis:entry colname="col3">Country</oasis:entry>
         <oasis:entry colname="col4">ICOS</oasis:entry>
         <oasis:entry colname="col5">Elevation</oasis:entry>
         <oasis:entry colname="col6">Mountain</oasis:entry>
         <oasis:entry colname="col7">Sampling heights</oasis:entry>
         <oasis:entry colname="col8">Limitations</oasis:entry>
         <oasis:entry colname="col9">Inflation</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2" align="left"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">class</oasis:entry>
         <oasis:entry colname="col5">(m)</oasis:entry>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7">(m)</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">STE</oasis:entry>
         <oasis:entry colname="col2" align="left">Steinkimmen</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">29</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">127<sup>∗</sup>, 187<sup>∗</sup>, 252<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">SVB</oasis:entry>
         <oasis:entry colname="col2" align="left">Svartberget</oasis:entry>
         <oasis:entry colname="col3">SE</oasis:entry>
         <oasis:entry colname="col4">1</oasis:entry>
         <oasis:entry colname="col5">269</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">85<sup>∗</sup>, 150<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">TAC</oasis:entry>
         <oasis:entry colname="col2" align="left">Tacolneston</oasis:entry>
         <oasis:entry colname="col3">UK</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">64</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">54<sup>∗</sup>, 100<sup>∗</sup>, 185<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">TOH</oasis:entry>
         <oasis:entry colname="col2" align="left">Torfhaus</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">801</oasis:entry>
         <oasis:entry colname="col6">small</oasis:entry>
         <oasis:entry colname="col7">76<sup>∗</sup>, 110<sup>∗</sup>, 147<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">TRN</oasis:entry>
         <oasis:entry colname="col2" align="left">Trainou</oasis:entry>
         <oasis:entry colname="col3">FR</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">131</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">50<sup>∗</sup>, 100<sup>∗</sup>, 180<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">UTO</oasis:entry>
         <oasis:entry colname="col2" align="left">Utö – Baltic sea</oasis:entry>
         <oasis:entry colname="col3">FI</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">8</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">57<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">WAO</oasis:entry>
         <oasis:entry colname="col2" align="left">Weybourne</oasis:entry>
         <oasis:entry colname="col3">UK</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">17</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">10<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">WES</oasis:entry>
         <oasis:entry colname="col2" align="left">Westerland</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">12</oasis:entry>
         <oasis:entry colname="col6">no</oasis:entry>
         <oasis:entry colname="col7">14</oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ZSF</oasis:entry>
         <oasis:entry colname="col2" align="left">Zugspitze</oasis:entry>
         <oasis:entry colname="col3">DE</oasis:entry>
         <oasis:entry colname="col4">2</oasis:entry>
         <oasis:entry colname="col5">2666</oasis:entry>
         <oasis:entry colname="col6">high</oasis:entry>
         <oasis:entry colname="col7">3<sup>∗</sup></oasis:entry>
         <oasis:entry colname="col8"/>
         <oasis:entry colname="col9">2</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</app>

<app id="App1.Ch1.S4">
  <label>Appendix D</label><title><inline-formula><mml:math id="M510" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> analysis</title>
      <p id="d2e10673">In this appendix, we provide the mathematical details for the <inline-formula><mml:math id="M511" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> analysis <xref ref-type="bibr" rid="bib1.bibx17" id="paren.64"><named-content content-type="pre">see, e.g.,</named-content></xref> used in Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS5"/>. The aim of this analysis is to quantify whether the data used in the inversion agree with the assumed uncertainties. We restrict this analysis to the prior <inline-formula><mml:math id="M512" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and diagonal <inline-formula><mml:math id="M513" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion, for which the matrix <inline-formula><mml:math id="M514" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> is constant. These inversions formally rely on the assumption of Gaussian probability distributions of the a priori scaling factors (error covariance matrix <inline-formula><mml:math id="M515" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula>) and the model–observation mismatch (<inline-formula><mml:math id="M516" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula>).</p>
      <p id="d2e10737">We start from the probability density of observations <inline-formula><mml:math id="M517" display="inline"><mml:mi mathvariant="bold-italic">y</mml:mi></mml:math></inline-formula> under the assumption that <inline-formula><mml:math id="M518" display="inline"><mml:mi mathvariant="bold-italic">s</mml:mi></mml:math></inline-formula> describes the true emissions:

          <disp-formula id="App1.Ch1.S4.E13" content-type="numbered"><label>D1</label><mml:math id="M519" display="block"><mml:mrow><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo><mml:mo>∝</mml:mo><mml:mi>exp⁡</mml:mi><mml:mo mathsize="1.1em">[</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup><mml:mo>)</mml:mo><mml:mo mathsize="1.1em">]</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

        Like in the inversion, <inline-formula><mml:math id="M520" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> describes uncertainties in the transport, in the corrected far-field contribution <inline-formula><mml:math id="M521" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula>, and in the observations <inline-formula><mml:math id="M522" display="inline"><mml:mi mathvariant="bold-italic">y</mml:mi></mml:math></inline-formula>. By a change of variables we obtain the probability for the a priori model–observation mismatch <inline-formula><mml:math id="M523" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>=</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula>: <inline-formula><mml:math id="M524" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo><mml:mi>d</mml:mi><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mo>=</mml:mo><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo><mml:msub><mml:mo>|</mml:mo><mml:mrow><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup></mml:mrow></mml:msub><mml:mi>d</mml:mi><mml:mi mathvariant="bold-italic">y</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d2e10972">To estimate whether a given <inline-formula><mml:math id="M525" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> is realistic, we need to integrate out the scaling factors <inline-formula><mml:math id="M526" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula> to obtain <inline-formula><mml:math id="M527" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. We denote the integral over the vector space of scaling factors <inline-formula><mml:math id="M528" display="inline"><mml:mi mathvariant="bold-italic">s</mml:mi></mml:math></inline-formula> with probability measure <inline-formula><mml:math id="M529" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> by <inline-formula><mml:math id="M530" display="inline"><mml:mrow><mml:msub><mml:mo>∫</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi></mml:msub><mml:mo>•</mml:mo><mml:mspace linebreak="nobreak" width="0.33em"/><mml:mi>d</mml:mi><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mo>∫</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi></mml:msub><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo><mml:mo>•</mml:mo><mml:msup><mml:mi>d</mml:mi><mml:mi>n</mml:mi></mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M531" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mi>n</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>. Using the above definitions in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S4.E13"/>), we obtain<fn id="App1.Ch1.Footn1"><p id="d2e11094">In Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S4.E17"/>), we first solve the Gaussian integral to obtain <inline-formula><mml:math id="M532" display="inline"><mml:mrow><mml:mi>exp⁡</mml:mi><mml:mo mathsize="1.1em" mathvariant="italic">{</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msup><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>⊤</mml:mo></mml:msup><mml:mo>[</mml:mo><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold">B</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>]</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo mathvariant="italic" mathsize="1.1em">}</mml:mo></mml:mrow></mml:math></inline-formula> and then use that <inline-formula><mml:math id="M533" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="bold">R</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold">HBH</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mo>)</mml:mo><mml:mo>[</mml:mo><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold">B</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="bold">I</mml:mi></mml:mrow></mml:math></inline-formula>.</p></fn> <xref ref-type="bibr" rid="bib1.bibx2" id="paren.65"/></p>
      <p id="d2e11306">

              <disp-formula specific-use="align" content-type="numbered"><mml:math id="M534" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.S4.E14"><mml:mtd><mml:mtext>D2</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi></mml:munder><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>|</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>)</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi>d</mml:mi><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi></mml:msub></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>∝</mml:mo><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi></mml:munder><mml:mi>exp⁡</mml:mi><mml:mo mathsize="1.1em">[</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.S4.E15"><mml:mtd><mml:mtext>D3</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">B</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>)</mml:mo><mml:msub><mml:mo mathsize="1.1em">]</mml:mo><mml:mrow><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mtext>ff</mml:mtext></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup></mml:mrow></mml:msub><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi>d</mml:mi><mml:mi>n</mml:mi></mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mover><mml:mo>=</mml:mo><mml:mrow><mml:mi mathvariant="bold-italic">τ</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mtext>prior</mml:mtext></mml:msup></mml:mrow></mml:mover><mml:munder><mml:mo movablelimits="false">∫</mml:mo><mml:mi mathvariant="bold-italic">τ</mml:mi></mml:munder><mml:mi>exp⁡</mml:mi><mml:mo mathsize="1.1em">[</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>-</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">τ</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>-</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="App1.Ch1.S4.E16"><mml:mtd><mml:mtext>D4</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msup><mml:mi mathvariant="bold-italic">τ</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">B</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mi mathvariant="bold-italic">τ</mml:mi><mml:mo mathsize="1.1em">]</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi>d</mml:mi><mml:mi>n</mml:mi></mml:msup><mml:mi mathvariant="bold-italic">τ</mml:mi></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S4.E17"><mml:mtd><mml:mtext>D5</mml:mtext></mml:mtd><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>∝</mml:mo><mml:mi>exp⁡</mml:mi><mml:mo mathsize="1.1em">[</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msup><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>⊤</mml:mo></mml:msup><mml:mo mathsize="1.1em">(</mml:mo><mml:mi mathvariant="bold">R</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold">HBH</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo mathsize="1.1em">]</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="App1.Ch1.S4.E18"><mml:mtd><mml:mtext>D6</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:mo>:</mml:mo><mml:mi>exp⁡</mml:mi><mml:mo mathsize="1.1em">(</mml:mo><mml:mo>-</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:mfrac></mml:mstyle><mml:msup><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">Q</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo mathsize="1.1em">)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          This result is a high-dimensional Gaussian probability distribution, <inline-formula><mml:math id="M535" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mtext>prior</mml:mtext></mml:msup><mml:mo>∼</mml:mo><mml:mi mathvariant="script">N</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:msup><mml:mi mathvariant="bold">Q</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. When drawing a random vector <inline-formula><mml:math id="M536" display="inline"><mml:mi mathvariant="bold-italic">μ</mml:mi></mml:math></inline-formula> from a probability distribution <inline-formula><mml:math id="M537" display="inline"><mml:mrow><mml:mi>P</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> as in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S4.E18"/>), it is very likely to find <inline-formula><mml:math id="M538" display="inline"><mml:mi mathvariant="bold-italic">μ</mml:mi></mml:math></inline-formula> such that <inline-formula><mml:math id="M539" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>≡</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">Q</mml:mi><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mo>≈</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> where <inline-formula><mml:math id="M540" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> denotes the number of degrees of freedom, which is the dimension of vector <inline-formula><mml:math id="M541" display="inline"><mml:mi mathvariant="bold-italic">μ</mml:mi></mml:math></inline-formula>. In our case, <inline-formula><mml:math id="M542" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub><mml:mo>∼</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">4</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> is the number of observation data points used per 1 month time window. In the limit of large <inline-formula><mml:math id="M543" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, one can approximate the probability distribution for <inline-formula><mml:math id="M544" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> by <inline-formula><mml:math id="M545" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>∼</mml:mo><mml:mi mathvariant="script">N</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> (Gaussian distribution with mean <inline-formula><mml:math id="M546" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and variance <inline-formula><mml:math id="M547" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) <xref ref-type="bibr" rid="bib1.bibx1" id="paren.66"><named-content content-type="post">Sect. 26.4</named-content></xref>. Thus, in an idealized setup we expect that <inline-formula><mml:math id="M548" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.03</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M549" display="inline"><mml:mrow><mml:mn mathvariant="normal">95</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> confidence interval). Values <inline-formula><mml:math id="M550" display="inline"><mml:mrow><mml:mo>≳</mml:mo><mml:mn mathvariant="normal">1.05</mml:mn></mml:mrow></mml:math></inline-formula> hint at underestimated uncertainties and <inline-formula><mml:math id="M551" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub><mml:mo>≲</mml:mo><mml:mn mathvariant="normal">0.95</mml:mn></mml:mrow></mml:math></inline-formula> indicates that uncertainties were too high. However, in reality we may have biases and not fully described errors such that the assumption of a Gaussian uncertainty in the model–observation mismatch becomes invalid and <inline-formula><mml:math id="M552" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">χ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>dof</mml:mtext></mml:msub><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> does not necessarily imply that uncertainties can simply be reduced.</p>
</app>

<app id="App1.Ch1.S5">
  <label>Appendix E</label><title>Sensitivity tests</title>
      <p id="d2e12081">Table <xref ref-type="table" rid="TE1a"/> provides an overview of the sensitivity tests. For this table, we quantify the impact of a parameter variation on the inversion results by the following, heuristic metric: Consider a fixed region, sector and inversion time window with posterior fluxes <inline-formula><mml:math id="M553" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula>, defined as the average of the prior <inline-formula><mml:math id="M554" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M555" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion result. The normalized deviation from the reference inversion is defined as <inline-formula><mml:math id="M556" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>|</mml:mo><mml:mi>F</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi>F</mml:mi><mml:mtext>ref.</mml:mtext></mml:msup><mml:mo>|</mml:mo></mml:mrow><mml:mrow><mml:msup><mml:mi>F</mml:mi><mml:mtext>ref. upper</mml:mtext></mml:msup><mml:mo>-</mml:mo><mml:msup><mml:mi>F</mml:mi><mml:mtext>ref. lower</mml:mtext></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M557" display="inline"><mml:mrow><mml:msup><mml:mi>F</mml:mi><mml:mtext>ref. upper</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M558" display="inline"><mml:mrow><mml:msup><mml:mi>F</mml:mi><mml:mtext>ref. lower</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> denote the bounds of the posterior uncertainty range. The overall impact is computed as the arithmetic mean of <inline-formula><mml:math id="M559" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> over the (usually monthly) time windows and a selection of regions and sectors. In the regions UK+Ireland, France, Italy, Poland, Austria+Czechia, the Netherlands, Belgium+Luxembourg, Switzerland, and Denmark we consider only total fluxes without distinguishing sectors. In Germany we include <inline-formula><mml:math id="M560" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula> for the total fluxes in four different regions (north, east, south, west) and additionally for national total fluxes distinguishing the three sectors agriculture, natural plus LULUCF, and other sectors. Effectively, this counts all fluxes in Germany twice and gives them more weight in the impact metric for Table <xref ref-type="table" rid="TE1a"/>.</p>

<table-wrap id="TE1a"><label>Table E1</label><caption><p id="d2e12191">Sensitivity tests for estimating the robustness of the inversion results with respect to tuning parameters. Modified numbers are marked in bold font. The impact column quantifies the deviation of the inversion results relative to the uncertainties and shall qualitatively indicate the relevance of the modified parameters (see explanation in the text). An impact of <inline-formula><mml:math id="M561" display="inline"><mml:mrow><mml:mn mathvariant="normal">100</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> means that the average deviation from the reference case is as large as the posterior uncertainty. Overall, we see that most tests have an impact of <inline-formula><mml:math id="M562" display="inline"><mml:mrow><mml:mo>≲</mml:mo><mml:mn mathvariant="normal">15</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>, implying that the effect on the inversion results is small compared to the uncertainty in the reference case. See also Fig. <xref ref-type="fig" rid="FE1"/> for the posterior emissions in the sensitivity tests.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="130pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="280pt"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">ID</oasis:entry>
         <oasis:entry colname="col2" align="left">Test case</oasis:entry>
         <oasis:entry colname="col3" align="left">Explanation</oasis:entry>
         <oasis:entry colname="col4">Impact</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">0</oasis:entry>
         <oasis:entry colname="col2" align="left">reference</oasis:entry>
         <oasis:entry colname="col3" align="left">reference case as explained in Sects. <xref ref-type="sec" rid="Ch1.S2"/> and <xref ref-type="sec" rid="Ch1.S3"/> and discussed in Part 2 <xref ref-type="bibr" rid="bib1.bibx6" id="paren.67"/>, uses <inline-formula><mml:math id="M563" display="inline"><mml:mrow><mml:mn mathvariant="normal">129</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">117</mml:mn></mml:mrow></mml:math></inline-formula> observations in 2021</oasis:entry>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col4">Model equivalent calculation (see Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">100</oasis:entry>
         <oasis:entry colname="col2" align="left">station elevation for mountain stations</oasis:entry>
         <oasis:entry colname="col3" align="left">treat all mountain stations like small mountains when computing model heights, as proposed by <xref ref-type="bibr" rid="bib1.bibx8" id="text.68"/>, <xref ref-type="bibr" rid="bib1.bibx18" id="text.69"/>, <xref ref-type="bibr" rid="bib1.bibx5" id="text.70"/>, uses <inline-formula><mml:math id="M564" display="inline"><mml:mrow><mml:mn mathvariant="normal">127</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">087</mml:mn></mml:mrow></mml:math></inline-formula> observations</oasis:entry>
         <oasis:entry colname="col4">5.3 %</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">101</oasis:entry>
         <oasis:entry colname="col2" align="left">no additional time averaging</oasis:entry>
         <oasis:entry colname="col3" align="left">average over 1 h like in the observations, instead of averaging 3 h</oasis:entry>
         <oasis:entry colname="col4">13 %</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col4">Filtering observations (see Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">200</oasis:entry>
         <oasis:entry colname="col2" align="left">fewer hours of day</oasis:entry>
         <oasis:entry colname="col3" align="left">use time window 12:00–16:00 LMT (00:00–04:00 for high mountains), <inline-formula><mml:math id="M565" display="inline"><mml:mrow><mml:mn mathvariant="normal">85</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">674</mml:mn></mml:mrow></mml:math></inline-formula> observations 11:00–17:00/23:00–05:00 LMT)</oasis:entry>
         <oasis:entry colname="col4">11 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">201</oasis:entry>
         <oasis:entry colname="col2" align="left">all hours of day</oasis:entry>
         <oasis:entry colname="col3" align="left">no filtering by time of day, increase uncertainty inflation (factors <inline-formula><mml:math id="M566" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS3"/>) by factor 1.5, uses <inline-formula><mml:math id="M567" display="inline"><mml:mrow><mml:mn mathvariant="normal">508</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">594</mml:mn></mml:mrow></mml:math></inline-formula> observations</oasis:entry>
         <oasis:entry colname="col4">38 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">202</oasis:entry>
         <oasis:entry colname="col2" align="left">one sampling height per station</oasis:entry>
         <oasis:entry colname="col3" align="left">use only highest sampling height of each station instead of up to 3 highest levels, <inline-formula><mml:math id="M568" display="inline"><mml:mrow><mml:mn mathvariant="normal">80</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">132</mml:mn></mml:mrow></mml:math></inline-formula> observations</oasis:entry>
         <oasis:entry colname="col4">16 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">203</oasis:entry>
         <oasis:entry colname="col2" align="left">no filtering based on wind</oasis:entry>
         <oasis:entry colname="col3" align="left">include data points with low wind speed, <inline-formula><mml:math id="M569" display="inline"><mml:mrow><mml:mn mathvariant="normal">147</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">019</mml:mn></mml:mrow></mml:math></inline-formula> observations</oasis:entry>
         <oasis:entry colname="col4">12 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">204</oasis:entry>
         <oasis:entry colname="col2" align="left">low min. wind speed</oasis:entry>
         <oasis:entry colname="col3" align="left">minimum wind speed: <inline-formula><mml:math id="M570" display="inline"><mml:mn mathvariant="normal">1.11</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M571" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> (reference: <inline-formula><mml:math id="M572" display="inline"><mml:mn mathvariant="normal">2</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M573" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>), <inline-formula><mml:math id="M574" display="inline"><mml:mrow><mml:mn mathvariant="normal">140</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">650</mml:mn></mml:mrow></mml:math></inline-formula> obs.</oasis:entry>
         <oasis:entry colname="col4">9.4 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">205</oasis:entry>
         <oasis:entry colname="col2" align="left">high min. wind speed</oasis:entry>
         <oasis:entry colname="col3" align="left">minimum wind speed: <inline-formula><mml:math id="M575" display="inline"><mml:mn mathvariant="normal">3.0</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M576" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> (reference: <inline-formula><mml:math id="M577" display="inline"><mml:mn mathvariant="normal">2</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M578" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>), <inline-formula><mml:math id="M579" display="inline"><mml:mrow><mml:mn mathvariant="normal">112</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">275</mml:mn></mml:mrow></mml:math></inline-formula> obs.</oasis:entry>
         <oasis:entry colname="col4">11 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">206</oasis:entry>
         <oasis:entry colname="col2" align="left">low max. model-obs. mismatch</oasis:entry>
         <oasis:entry colname="col3" align="left">discard when <inline-formula><mml:math id="M580" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:msub><mml:mo>)</mml:mo><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mtext>ff</mml:mtext></mml:msubsup><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="bold">120</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M581" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M582" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mtext>ff</mml:mtext></mml:msubsup><mml:mo>&lt;</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="bold">12</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M583" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M584" display="inline"><mml:mrow><mml:mn mathvariant="normal">127</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">055</mml:mn></mml:mrow></mml:math></inline-formula> obs. (reference case: <inline-formula><mml:math id="M585" display="inline"><mml:mn mathvariant="normal">200</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M586" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> / <inline-formula><mml:math id="M587" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M588" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">3.5 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">207</oasis:entry>
         <oasis:entry colname="col2" align="left">high max. model-obs. mismatch</oasis:entry>
         <oasis:entry colname="col3" align="left">discard when <inline-formula><mml:math id="M589" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="bold">H</mml:mi><mml:mi mathvariant="bold-italic">s</mml:mi><mml:msub><mml:mo>)</mml:mo><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mtext>ff</mml:mtext></mml:msubsup><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="bold">300</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M590" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M591" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msubsup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mi>i</mml:mi><mml:mtext>ff</mml:mtext></mml:msubsup><mml:mo>&lt;</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="bold">30</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M592" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M593" display="inline"><mml:mrow><mml:mn mathvariant="normal">129</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">706</mml:mn></mml:mrow></mml:math></inline-formula> obs.</oasis:entry>
         <oasis:entry colname="col4">1.3 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">208</oasis:entry>
         <oasis:entry colname="col2" align="left">low max. data point influence</oasis:entry>
         <oasis:entry colname="col3" align="left">increase uncertainty if <inline-formula><mml:math id="M594" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="bold">2.5</mml:mn><mml:msqrt><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow><mml:mtext>step 1</mml:mtext></mml:msubsup></mml:mrow></mml:msqrt></mml:mrow></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS2"/> (reference value: <inline-formula><mml:math id="M595" display="inline"><mml:mn mathvariant="normal">3</mml:mn></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">11 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">209</oasis:entry>
         <oasis:entry colname="col2" align="left">high max. data point influence</oasis:entry>
         <oasis:entry colname="col3" align="left">increase uncertainty if <inline-formula><mml:math id="M596" display="inline"><mml:mrow><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">μ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:mo>&gt;</mml:mo><mml:mn mathvariant="bold">4</mml:mn><mml:msqrt><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow><mml:mtext>step 1</mml:mtext></mml:msubsup></mml:mrow></mml:msqrt></mml:mrow></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS2"/> (reference value: <inline-formula><mml:math id="M597" display="inline"><mml:mn mathvariant="normal">3</mml:mn></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">15 %</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<table-wrap id="TE1b"><label>Table E1</label><caption><p id="d2e12990">Continued.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="130pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="280pt"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">ID</oasis:entry>
         <oasis:entry colname="col2" align="left">Test case</oasis:entry>
         <oasis:entry colname="col3" align="left">Explanation</oasis:entry>
         <oasis:entry colname="col4">Impact</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col4">Uncertainty/error covariance matrix <inline-formula><mml:math id="M598" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> (see Sects. <xref ref-type="sec" rid="Ch1.S2.SS5"/> and <xref ref-type="sec" rid="Ch1.S2.SS6"/>) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">300</oasis:entry>
         <oasis:entry colname="col2" align="left">no plume uncertainty</oasis:entry>
         <oasis:entry colname="col3" align="left">no extra uncertainty due to localized emissions (Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS1"/>)</oasis:entry>
         <oasis:entry colname="col4">0.27 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">301</oasis:entry>
         <oasis:entry colname="col2" align="left">high plume uncertainty</oasis:entry>
         <oasis:entry colname="col3" align="left">extra uncertainty: <inline-formula><mml:math id="M599" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 1</mml:mtext></mml:msubsup><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mo>′</mml:mo></mml:msubsup><mml:mo>+</mml:mo><mml:mn mathvariant="bold">0.5</mml:mn><mml:msubsup><mml:mi mathvariant="italic">ρ</mml:mi><mml:mi>i</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS1"/> (reference: <inline-formula><mml:math id="M600" display="inline"><mml:mn mathvariant="normal">0.25</mml:mn></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">0.56 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">302</oasis:entry>
         <oasis:entry colname="col2" align="left">low uncertainty inflation</oasis:entry>
         <oasis:entry colname="col3" align="left">uncertainty inflation by <inline-formula><mml:math id="M601" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M602" display="inline"><mml:mn mathvariant="normal">2.25</mml:mn></mml:math></inline-formula> instead of <inline-formula><mml:math id="M603" display="inline"><mml:mn mathvariant="normal">2</mml:mn></mml:math></inline-formula> or <inline-formula><mml:math id="M604" display="inline"><mml:mn mathvariant="normal">3</mml:mn></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS3"/></oasis:entry>
         <oasis:entry colname="col4">8.6 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">303</oasis:entry>
         <oasis:entry colname="col2" align="left">high uncertainty inflation</oasis:entry>
         <oasis:entry colname="col3" align="left">uncertainty inflation by <inline-formula><mml:math id="M605" display="inline"><mml:mrow><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M606" display="inline"><mml:mn mathvariant="normal">4.5</mml:mn></mml:math></inline-formula> instead of <inline-formula><mml:math id="M607" display="inline"><mml:mn mathvariant="normal">2</mml:mn></mml:math></inline-formula> or <inline-formula><mml:math id="M608" display="inline"><mml:mn mathvariant="normal">3</mml:mn></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS3"/></oasis:entry>
         <oasis:entry colname="col4">13 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">304</oasis:entry>
         <oasis:entry colname="col2" align="left">small horizontal error correlation scale</oasis:entry>
         <oasis:entry colname="col3" align="left">scale <inline-formula><mml:math id="M609" display="inline"><mml:mn mathvariant="normal">191</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M610" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> instead of <inline-formula><mml:math id="M611" display="inline"><mml:mn mathvariant="normal">319</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M612" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> in localization matrix <inline-formula><mml:math id="M613" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (Sect. <xref ref-type="sec" rid="Ch1.S2.SS5.SSS2"/>)</oasis:entry>
         <oasis:entry colname="col4">6.0 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">305</oasis:entry>
         <oasis:entry colname="col2" align="left">large horizontal error correlation scale</oasis:entry>
         <oasis:entry colname="col3" align="left">scale <inline-formula><mml:math id="M614" display="inline"><mml:mn mathvariant="normal">510</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M615" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> instead of <inline-formula><mml:math id="M616" display="inline"><mml:mn mathvariant="normal">319</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M617" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> in localization matrix <inline-formula><mml:math id="M618" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (Sect. <xref ref-type="sec" rid="Ch1.S2.SS5.SSS2"/>)</oasis:entry>
         <oasis:entry colname="col4">8.3 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">306</oasis:entry>
         <oasis:entry colname="col2" align="left">small vertical error correlation scale</oasis:entry>
         <oasis:entry colname="col3" align="left">scale <inline-formula><mml:math id="M619" display="inline"><mml:mn mathvariant="normal">400</mml:mn></mml:math></inline-formula> m instead of <inline-formula><mml:math id="M620" display="inline"><mml:mn mathvariant="normal">1</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M621" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> in localization matrix <inline-formula><mml:math id="M622" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (Sect. <xref ref-type="sec" rid="Ch1.S2.SS5.SSS2"/>)</oasis:entry>
         <oasis:entry colname="col4">2.3 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">307</oasis:entry>
         <oasis:entry colname="col2" align="left">short error correlation time scale</oasis:entry>
         <oasis:entry colname="col3" align="left">scale 4 h instead of 6 h in localization matrix <inline-formula><mml:math id="M623" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (Sect. <xref ref-type="sec" rid="Ch1.S2.SS5.SSS2"/>)</oasis:entry>
         <oasis:entry colname="col4">2.5 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">308</oasis:entry>
         <oasis:entry colname="col2" align="left">long error correlation time scale</oasis:entry>
         <oasis:entry colname="col3" align="left">scale 10 h instead of 6 h in localization matrix <inline-formula><mml:math id="M624" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold">C</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (Sect. <xref ref-type="sec" rid="Ch1.S2.SS5.SSS2"/>)</oasis:entry>
         <oasis:entry colname="col4">2.8 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">309</oasis:entry>
         <oasis:entry colname="col2" align="left">low uncorrelated uncertainty</oasis:entry>
         <oasis:entry colname="col3" align="left"><inline-formula><mml:math id="M625" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>const</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M626" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> instead of <inline-formula><mml:math id="M627" display="inline"><mml:mn mathvariant="normal">10</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M628" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> in Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>)</oasis:entry>
         <oasis:entry colname="col4">21 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">310</oasis:entry>
         <oasis:entry colname="col2" align="left">high uncorrelated uncertainty</oasis:entry>
         <oasis:entry colname="col3" align="left"><inline-formula><mml:math id="M629" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>const</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M630" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> instead of <inline-formula><mml:math id="M631" display="inline"><mml:mn mathvariant="normal">10</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M632" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> in Eq. (<xref ref-type="disp-formula" rid="Ch1.E2"/>)</oasis:entry>
         <oasis:entry colname="col4">22 %</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">311</oasis:entry>
         <oasis:entry colname="col2" align="left">diagonal <inline-formula><mml:math id="M633" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> without ensemble</oasis:entry>
         <oasis:entry colname="col3" align="left">see Sect. <xref ref-type="sec" rid="Ch1.S2.SS5.SSS1"/></oasis:entry>
         <oasis:entry colname="col4">33 %</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col4">Far-field correction (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS3"/> and Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">400</oasis:entry>
         <oasis:entry colname="col2" align="left">no far-field correction</oasis:entry>
         <oasis:entry colname="col3" align="left"/>
         <oasis:entry colname="col4">35 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">401</oasis:entry>
         <oasis:entry colname="col2" align="left">weak far-field correction</oasis:entry>
         <oasis:entry colname="col3" align="left"><inline-formula><mml:math id="M634" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mi mathvariant="bold">I</mml:mi></mml:mrow></mml:math></inline-formula> instead of <inline-formula><mml:math id="M635" display="inline"><mml:mrow><mml:mn mathvariant="normal">16</mml:mn><mml:mi mathvariant="bold">I</mml:mi></mml:mrow></mml:math></inline-formula> in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E3"/>)</oasis:entry>
         <oasis:entry colname="col4">16 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">402</oasis:entry>
         <oasis:entry colname="col2" align="left">strong far-field correction</oasis:entry>
         <oasis:entry colname="col3" align="left"><inline-formula><mml:math id="M636" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2.78</mml:mn><mml:mi mathvariant="bold">I</mml:mi></mml:mrow></mml:math></inline-formula> instead of <inline-formula><mml:math id="M637" display="inline"><mml:mrow><mml:mn mathvariant="normal">16</mml:mn><mml:mi mathvariant="bold">I</mml:mi></mml:mrow></mml:math></inline-formula> in Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E3"/>)</oasis:entry>
         <oasis:entry colname="col4">9.2 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">403</oasis:entry>
         <oasis:entry colname="col2" align="left">small horiz. far-field correction scale</oasis:entry>
         <oasis:entry colname="col3" align="left">scale <inline-formula><mml:math id="M638" display="inline"><mml:mn mathvariant="normal">191</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M639" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> instead of <inline-formula><mml:math id="M640" display="inline"><mml:mn mathvariant="normal">319</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M641" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> in localization matrix <inline-formula><mml:math id="M642" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/></oasis:entry>
         <oasis:entry colname="col4">6.8 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">404</oasis:entry>
         <oasis:entry colname="col2" align="left">large horiz. far-field correction scale</oasis:entry>
         <oasis:entry colname="col3" align="left">scale <inline-formula><mml:math id="M643" display="inline"><mml:mn mathvariant="normal">510</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M644" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> instead of <inline-formula><mml:math id="M645" display="inline"><mml:mn mathvariant="normal">319</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M646" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> in localization matrix <inline-formula><mml:math id="M647" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/></oasis:entry>
         <oasis:entry colname="col4">4.5 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">405</oasis:entry>
         <oasis:entry colname="col2" align="left">short far-field correction time scale</oasis:entry>
         <oasis:entry colname="col3" align="left">time scale 10 h instead of 16 h in localization matrix <inline-formula><mml:math id="M648" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/></oasis:entry>
         <oasis:entry colname="col4">3.7 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">406</oasis:entry>
         <oasis:entry colname="col2" align="left">long far-field correction time scale</oasis:entry>
         <oasis:entry colname="col3" align="left">time scale 28 h instead of 16 h in localization matrix <inline-formula><mml:math id="M649" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/></oasis:entry>
         <oasis:entry colname="col4">3.8 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">407</oasis:entry>
         <oasis:entry colname="col2" align="left">extra-long far-field correction time</oasis:entry>
         <oasis:entry colname="col3" align="left">time scale 48 h instead of 16 h in localization matrix <inline-formula><mml:math id="M650" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/></oasis:entry>
         <oasis:entry colname="col4">7.1 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">408</oasis:entry>
         <oasis:entry colname="col2" align="left">low vertical far-field correction scale</oasis:entry>
         <oasis:entry colname="col3" align="left">scale <inline-formula><mml:math id="M651" display="inline"><mml:mn mathvariant="normal">400</mml:mn></mml:math></inline-formula> m instead of <inline-formula><mml:math id="M652" display="inline"><mml:mn mathvariant="normal">1</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M653" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> in localization matrix <inline-formula><mml:math id="M654" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/></oasis:entry>
         <oasis:entry colname="col4">0.92 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">409</oasis:entry>
         <oasis:entry colname="col2" align="left">strict far-field observation selection</oasis:entry>
         <oasis:entry colname="col3" align="left">construct far-field correction based on observations with cumulated signal from categorized fluxes <inline-formula><mml:math id="M655" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M656" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> (reference: <inline-formula><mml:math id="M657" display="inline"><mml:mn mathvariant="normal">20</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M658" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>) and from natural fluxes <inline-formula><mml:math id="M659" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M660" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> (reference: <inline-formula><mml:math id="M661" display="inline"><mml:mn mathvariant="normal">20</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M662" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">20 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">410</oasis:entry>
         <oasis:entry colname="col2" align="left">loose far-field observation selection</oasis:entry>
         <oasis:entry colname="col3" align="left">far-field correction uses observations with cumulated signal from categorized fluxes <inline-formula><mml:math id="M663" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M664" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> (ref.: <inline-formula><mml:math id="M665" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M666" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>), from natural fluxes <inline-formula><mml:math id="M667" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M668" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> (ref.: <inline-formula><mml:math id="M669" display="inline"><mml:mn mathvariant="normal">20</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M670" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>), and from all emissions within the domain <inline-formula><mml:math id="M671" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">80</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M672" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula> (ref.: <inline-formula><mml:math id="M673" display="inline"><mml:mn mathvariant="normal">50</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M674" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">14 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">411</oasis:entry>
         <oasis:entry colname="col2" align="left">unrestricted iterative far-field correction</oasis:entry>
         <oasis:entry colname="col3" align="left">far-field correction uses all observations with cumulated signal from categorized fluxes <inline-formula><mml:math id="M675" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M676" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppb</mml:mi></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math id="M677" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> uses localization scales 10 h, <inline-formula><mml:math id="M678" display="inline"><mml:mn mathvariant="normal">191</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M679" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula>; far-field correction and inversion are iterated 3 times, the correction always uses the posterior concentrations from the previous iteration. This aggressively suppresses large scale signals (biases) in the observations.</oasis:entry>
         <oasis:entry colname="col4">30 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">412</oasis:entry>
         <oasis:entry colname="col2" align="left">low correction uncertainty</oasis:entry>
         <oasis:entry colname="col3" align="left">use <inline-formula><mml:math id="M680" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 4</mml:mtext></mml:msubsup><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 3</mml:mtext></mml:msubsup><mml:mo>+</mml:mo><mml:mn mathvariant="bold">0.25</mml:mn><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS4"/> (reference value: 0.5)</oasis:entry>
         <oasis:entry colname="col4">2.5 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">413</oasis:entry>
         <oasis:entry colname="col2" align="left">high correction uncertainty</oasis:entry>
         <oasis:entry colname="col3" align="left">use <inline-formula><mml:math id="M681" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 4</mml:mtext></mml:msubsup><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 3</mml:mtext></mml:msubsup><mml:mo>+</mml:mo><mml:mn mathvariant="bold">1.0</mml:mn><mml:mo>|</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>|</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">C</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS4"/> (reference value: 0.5)</oasis:entry>
         <oasis:entry colname="col4">4.2 %</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">414</oasis:entry>
         <oasis:entry colname="col2" align="left">uncorrelated correction uncertainty</oasis:entry>
         <oasis:entry colname="col3" align="left">use <inline-formula><mml:math id="M682" display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 4</mml:mtext></mml:msubsup><mml:mo>=</mml:mo><mml:msubsup><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow><mml:mtext>step 3</mml:mtext></mml:msubsup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msubsup><mml:mi mathvariant="bold-italic">c</mml:mi><mml:mi>i</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S2.SS6.SSS4"/></oasis:entry>
         <oasis:entry colname="col4">3.6 %</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col4">A priori scaling factor error covariance matrix <inline-formula><mml:math id="M683" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula> (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS8"/>) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">500</oasis:entry>
         <oasis:entry colname="col2" align="left">low prior uncertainty</oasis:entry>
         <oasis:entry colname="col3" align="left"><inline-formula><mml:math id="M684" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> prior uncertainty set to <inline-formula><mml:math id="M685" display="inline"><mml:mn mathvariant="normal">0.25</mml:mn></mml:math></inline-formula> (ref.: <inline-formula><mml:math id="M686" display="inline"><mml:mn mathvariant="normal">0.4</mml:mn></mml:math></inline-formula>) for well-observed areas, <inline-formula><mml:math id="M687" display="inline"><mml:mn mathvariant="normal">0.2</mml:mn></mml:math></inline-formula> (ref.: <inline-formula><mml:math id="M688" display="inline"><mml:mn mathvariant="normal">0.25</mml:mn></mml:math></inline-formula>) for remote and plume categories, <inline-formula><mml:math id="M689" display="inline"><mml:mn mathvariant="normal">0.33</mml:mn></mml:math></inline-formula> (ref.: <inline-formula><mml:math id="M690" display="inline"><mml:mn mathvariant="normal">0.5</mml:mn></mml:math></inline-formula>) for sector-resolving categories</oasis:entry>
         <oasis:entry colname="col4">14 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">501</oasis:entry>
         <oasis:entry colname="col2" align="left">high prior uncertainty in Germany</oasis:entry>
         <oasis:entry colname="col3" align="left">prior uncertainty such that national total sector emissions in Germany have <inline-formula><mml:math id="M691" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> uncertainty <inline-formula><mml:math id="M692" display="inline"><mml:mrow><mml:mn mathvariant="normal">60</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> for each distinguished sector (reference: approx. <inline-formula><mml:math id="M693" display="inline"><mml:mrow><mml:mn mathvariant="normal">40</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">8.6 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">502</oasis:entry>
         <oasis:entry colname="col2" align="left">uncorrelated prior, <inline-formula><mml:math id="M694" display="inline"><mml:mi mathvariant="bold">B</mml:mi></mml:math></inline-formula> is diagonal</oasis:entry>
         <oasis:entry colname="col3" align="left"><inline-formula><mml:math id="M695" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> prior uncertainty in sector categories in Germany: <inline-formula><mml:math id="M696" display="inline"><mml:mn mathvariant="normal">0.75</mml:mn></mml:math></inline-formula>; uncertainty on national total: <inline-formula><mml:math id="M697" display="inline"><mml:mrow><mml:mn mathvariant="normal">35</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> for agriculture, <inline-formula><mml:math id="M698" display="inline"><mml:mrow><mml:mn mathvariant="normal">39</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> for other anthropogenic</oasis:entry>
         <oasis:entry colname="col4">5.6 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">503</oasis:entry>
         <oasis:entry colname="col2" align="left">no sector distinction in prior</oasis:entry>
         <oasis:entry colname="col3" align="left">four regions in Germany with uncorrelated <inline-formula><mml:math id="M699" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> prior uncertainty of <inline-formula><mml:math id="M700" display="inline"><mml:mn mathvariant="normal">0.4</mml:mn></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">7.7 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">504</oasis:entry>
         <oasis:entry colname="col2" align="left">low spatial resolution in Germany</oasis:entry>
         <oasis:entry colname="col3" align="left">two initially uncorrelated regions in Germany (south-west and north-east), each distinguishing sectors like in the reference case</oasis:entry>
         <oasis:entry colname="col4">15 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">506</oasis:entry>
         <oasis:entry colname="col2" align="left">distinguish 5 sectors in Germany</oasis:entry>
         <oasis:entry colname="col3" align="left">split “non-agr.” into sectors waste, public power, and other emissions</oasis:entry>
         <oasis:entry colname="col4">2.1 %</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<table-wrap id="TE1c"><label>Table E1</label><caption><p id="d2e14737">Continued.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="130pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="280pt"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">ID</oasis:entry>
         <oasis:entry colname="col2" align="left">Test case</oasis:entry>
         <oasis:entry colname="col3" align="left">Explanation</oasis:entry>
         <oasis:entry colname="col4">Impact</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col4">Station selection </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">601</oasis:entry>
         <oasis:entry colname="col2" align="left">require full-year coverage</oasis:entry>
         <oasis:entry colname="col3" align="left">require <inline-formula><mml:math id="M701" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> days coverage each month: 35 of 50 stations, <inline-formula><mml:math id="M702" display="inline"><mml:mrow><mml:mn mathvariant="normal">105</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">701</mml:mn></mml:mrow></mml:math></inline-formula> obs.</oasis:entry>
         <oasis:entry colname="col4">13 %</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">602</oasis:entry>
         <oasis:entry colname="col2" align="left">require good full-year coverage</oasis:entry>
         <oasis:entry colname="col3" align="left">require <inline-formula><mml:math id="M703" display="inline"><mml:mrow><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> days coverage each month: 27 of 50 stations, <inline-formula><mml:math id="M704" display="inline"><mml:mrow><mml:mn mathvariant="normal">82</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">912</mml:mn></mml:mrow></mml:math></inline-formula> observations (discussed in Fig. A2 of Part 2)</oasis:entry>
         <oasis:entry colname="col4">33 %</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col4">Inversion time windows (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS7"/>) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">701</oasis:entry>
         <oasis:entry colname="col2" align="left">2 month inversion window</oasis:entry>
         <oasis:entry colname="col3" align="left">uncertainties are not adjusted to the longer window</oasis:entry>
         <oasis:entry colname="col4">12 %</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">702</oasis:entry>
         <oasis:entry colname="col2" align="left">3 month inversion window</oasis:entry>
         <oasis:entry colname="col3" align="left">uncertainties are not adjusted to the longer window</oasis:entry>
         <oasis:entry colname="col4">18 %</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <fig id="FE1"><label>Figure E1</label><caption><p id="d2e14894">Posterior emissions and uncertainties of selected countries and German sectors for all sensitivity tests. Thin horizontal lines indicate the posterior of the reference case 0. Markers show the average of prior <inline-formula><mml:math id="M705" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M706" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion. Vertical lines show uncertainties (<inline-formula><mml:math id="M707" display="inline"><mml:mrow><mml:mn mathvariant="normal">95</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> confidence intervals) and cover the uncertainty range of prior <inline-formula><mml:math id="M708" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> and posterior <inline-formula><mml:math id="M709" display="inline"><mml:mi mathvariant="bold">R</mml:mi></mml:math></inline-formula> inversion. The individual tests are listed in Table <xref ref-type="table" rid="TE1a"/>. For all test cases, the emission estimates for the shown countries remain within the uncertainty range of the reference case.</p></caption>
        
        <graphic xlink:href="https://acp.copernicus.org/articles/25/17159/2025/acp-25-17159-2025-f09.png"/>

      </fig>

</app>
  </app-group><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d2e14951">A collection of model data, inversion results, and data for reproducing most figures in this work is available at <ext-link xlink:href="https://doi.org/10.5281/zenodo.17414768" ext-link-type="DOI">10.5281/zenodo.17414768</ext-link> <xref ref-type="bibr" rid="bib1.bibx7" id="paren.71"/>.</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d2e14963">VB and TR conceptualized the inversion method. VB implemented the inversion method and wrote the original draft together with AKKW. TR configured the transport model. TR and BE interpolated the a priori flux data which BE collected. DJdlCO organized data streams of <inline-formula><mml:math id="M710" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations and observations. JF, BM, AMB, DJdlCO, TR and VB contributed to testing and tuning the transport model. NB contributed to the model–observation comparison. AKKW supervised and coordinated the project. All authors reviewed and edited the manuscript.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d2e14980">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d2e14987">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. While Copernicus Publications makes every effort to include appropriate place names, the final responsibility lies with the authors. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.</p>
  </notes><ack><title>Acknowledgements</title><p id="d2e14993">In our simulations we use modified Copernicus Atmosphere Monitoring Service information and ECCAD products for initial and lateral boundary conditions, and for a priori fluxes. We thank Stefan Feigenspan, Christian Mielke, Theo Wernicke, John Akubia and Roland Fuß for helpful discussions and providing a priori emission fields. We thank Roland Potthast, Frank-Thomas Koch, Christoph Gerbig, Dominik Brunner, Michael Steiner, David Ho, Thomas Kaminski, Hannes Imhof and our partners in the ITMS project for very helpful and inspiring discussions. We thank two anonymous reviewers for helping improve this manuscript. We also wish to thank Peter Bergamaschi, Aurélie Colomb, Martine De Mazière, Lukas Emmenegger, Dagmar Kubistin, Irene Lehner, Kari Lehtinen, Markus Leuenberger, Cathrine Lund Myhre, Michal V. Marek, Simon O'Doherty, Stephen M. Platt, Christian Plaß-Dülmer, Francesco Apadula, Sabrina Arnold, Pierre-Eric Blanc, Dominik Brunner, Huilin Chen, Lukasz Chmura, Łukasz Chmura, Sébastien Conil, Cédric Couret, Paolo Cristofanelli, Grant Forster, Arnoud Frumau, Christoph Gerbig, François Gheusi, Samuel Hammer, Laszlo Haszpra, Juha Hatakka, Michal Heliasz, Stephan Henne, Arjan Hensen, Antje Hoheisel, Tobias Kneuer, Eric Larmanou, Tuomas Laurila, Ari Leskinen, Ingeborg Levin, Matthias Lindauer, Morgan Lopez, Ivan Mammarella, Giovanni Manca, Andrew Manning, Damien Martin, Frank Meinhardt, Meelis Mölder, Jennifer Müller-Williams, Steffen Manfred Noe, Jarosław Nȩcki, Mikaell Ottosson-Löfvenius, Carole Philippon, Joseph Pitt, Michel Ramonet, Pedro Rivas-Soriano, Bert Scheeren, Marcus Schumacher, Mahesh Kumar Sha, Gerard Spain, Martin Steinbacher, Lise Lotte Sørensen, Alex Vermeulen, Gabriela Vítková, Irène Xueref-Remy, Alcide di Sarra, Franz Conen, Victor Kazan, Yves-Alain Roulet, Tobias Biermann, Marc Delmotte, Daniela Heltai, Ove Hermansen, Kateřina Komínková, Olivier Laurent, Janne Levula, Chris Lunder, Per Marklund, Josep-Anton Morguí, Jean-Marc Pichon, Martina Schmidt, Damiano Sferlazzo, Paul Smith, Kieran Stanley, Pamela Trisolino and Giulia Zazzeri for providing the atmospheric observations for the stations listed in Table <xref ref-type="table" rid="TC1a"/>. VB, DJCO, NB and AMB acknowledge funding by the German Federal Ministry for Education and Research (BMBF) in the ITMS project (grant 01LK2102B) as well as BE (grant 01LK2104A). Map plots were made with Natural Earth.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d2e15002">This research has been supported by the Bundesministerium für Bildung und Forschung (grant nos. 01LK2102B and 01LK2104A).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d2e15008">This paper was edited by Chris Wilson and reviewed by two anonymous referees.</p>
  </notes><ref-list>
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