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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-21-9585-2021</article-id><title-group><article-title>Processes influencing lower stratospheric water vapour in monsoon anticyclones: insights from Lagrangian modelling</article-title><alt-title>Processes influencing lower stratospheric water vapour in
monsoon anticyclones</alt-title>
      </title-group><?xmltex \runningtitle{Processes influencing lower stratospheric water vapour in
monsoon anticyclones}?><?xmltex \runningauthor{N.~P.~Plaza et~al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Plaza</surname><given-names>Nuria Pilar</given-names></name>
          <email>npplamar@upo.es</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Podglajen</surname><given-names>Aurélien</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-9768-3511</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Peña-Ortiz</surname><given-names>Cristina</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3 aff4">
          <name><surname>Ploeger</surname><given-names>Felix</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Área de Física de la Tierra, Departamento de Sistemas Físicos, Químicos y Naturales,<?xmltex \hack{\break}?> Universidad Pablo de Olavide, Seville, Spain</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Laboratoire de Météorologie Dynamique (LMD/IPSL), École polytechnique, Institut polytechnique de Paris,<?xmltex \hack{\break}?> Sorbonne Université, École normale supérieure, PSL Research University, CNRS, Paris, France</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Institute of Climate Research, Stratosphere (IEK-7). Forschungszentrum Jülich, Jülich, Germany</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Institute for Atmospheric and Environmental Research, University of Wuppertal, Wuppertal, Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Nuria Pilar Plaza (npplamar@upo.es)</corresp></author-notes><pub-date><day>28</day><month>June</month><year>2021</year></pub-date>
      
      <volume>21</volume>
      <issue>12</issue>
      <fpage>9585</fpage><lpage>9607</lpage>
      <history>
        <date date-type="received"><day>28</day><month>September</month><year>2020</year></date>
           <date date-type="accepted"><day>19</day><month>May</month><year>2021</year></date>
           <date date-type="rev-recd"><day>17</day><month>May</month><year>2021</year></date>
           <date date-type="rev-request"><day>27</day><month>October</month><year>2020</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2021 </copyright-statement>
        <copyright-year>2021</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/.html">This article is available from https://acp.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e133">We investigate the influence of different chemical and physical processes on the water vapour distribution in the lower stratosphere (LS), in particular in
the Asian and North American monsoon anticyclones (AMA and NAMA, respectively). Specifically, we use the chemistry transport model CLaMS to
analyse the effects of large-scale temperatures, methane oxidation, ice microphysics, and small-scale atmospheric mixing processes in different model
experiments. All these processes hydrate the LS and, particularly, the
AMA. While ice microphysics has the largest global moistening impact, it is
small-scale mixing which dominates the specific signature in the AMA in the
model experiments. In particular, the small-scale mixing parameterization
strongly contributes to the water vapour transport to this region and improves
the simulation of the intra-seasonal variability, resulting in a better
agreement with the Aura Microwave Limb Sounder (MLS) observations. Although none of our experiments reproduces the spatial pattern of the NAMA as seen in MLS observations, they all exhibit a realistic annual cycle and intra-seasonal variability, which are mainly
controlled by large-scale temperatures. We further analyse the sensitivity of
these results to the domain-filling trajectory set-up, here-called Lagrangian
trajectory filling (LTF). Compared with MLS observations and with a multiyear reference simulation using the full-blown chemistry transport model version of
CLaMS, we find that the LTF schemes result in a drier global LS and in a
weaker water vapour signal over the monsoon regions, which is likely related
to the specification of the lower boundary condition. Overall, our results
emphasize the importance of subgrid-scale mixing and multiple transport
pathways from the troposphere in representing water vapour in the AMA.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e145">Water vapour in the upper troposphere–lower stratosphere (UTLS) is one of the most important chemical species because of its impact on the global radiative
budget <xref ref-type="bibr" rid="bib1.bibx67 bib1.bibx57" id="paren.1"/>. Its distribution
depends on the strength of the Brewer–Dobson circulation, the
quasi-horizontal isentropic transport between tropical and high latitudes and
the convective activity that enhances the cross-isentropic transport
<xref ref-type="bibr" rid="bib1.bibx11 bib1.bibx8 bib1.bibx50" id="paren.2"/>. The Brewer–Dobson circulation lifts up moist
air from the troposphere into the deep stratosphere through the Tropical
Tropopause Layer (TTL). While crossing the TTL, air masses encounter the cold
temperatures of the tropopause, the so-called Cold Point Tropopause (CPT)
<xref ref-type="bibr" rid="bib1.bibx12" id="paren.3"/>, resulting in ice formation,
sedimentation and dehydration of the ascending air parcels. A number of
studies have shown that, at first order, water vapour entering the
stratosphere responds to the variability in CPT temperature
<xref ref-type="bibr" rid="bib1.bibx38 bib1.bibx11 bib1.bibx51" id="paren.4"><named-content content-type="pre">e.g.</named-content></xref>. In
particular, the pronounced annual cycle of<?pagebreak page9586?> tropical tropopause temperature is
responsible for dry and wet anomalies which propagate upward in the tropical
lower stratosphere, forming the water vapour tape recorder
<xref ref-type="bibr" rid="bib1.bibx38" id="paren.5"/>. However, the control of water vapour anomalies by
the CPT weakens during boreal summer, when maxima of water vapour in the UTLS
are found over the Asian and North American monsoon regions
<xref ref-type="bibr" rid="bib1.bibx51" id="paren.6"/>. This raises the question of the importance of
the monsoon systems as a secondary pathway to transport water vapour into the
LS.</p>
      <p id="d1e169">Monsoon circulations appear as a dynamical response to diabatic heating
released by persistent convection over regions close to the Equator <xref ref-type="bibr" rid="bib1.bibx18" id="paren.7"/>. In the case of the Asian Monsoon, convection has its
climatological centre over the Bay of Bengal and generates the AMA, a strong planetary-scale anticyclone in the UTLS which is the most dominant feature in
the global atmosphere during boreal summer <xref ref-type="bibr" rid="bib1.bibx19" id="paren.8"/>. The rapid
vertical transport in the inner core of the monsoon pumps up moist air masses
from the troposphere directly into the UTLS. There, the strong anticyclonic
winds of the monsoon circulation behave as a transport barrier
<xref ref-type="bibr" rid="bib1.bibx45" id="paren.9"/> that isolates the air masses from outer regions, keeping the air with high water vapour content (and similar for other trace
gases with tropospheric sources) confined
<xref ref-type="bibr" rid="bib1.bibx52 bib1.bibx42 bib1.bibx54 bib1.bibx58" id="paren.10"/>. At this height, air masses slowly ascend through the
cold tropopause, where they further dehydrate
<xref ref-type="bibr" rid="bib1.bibx42" id="paren.11"/>. However, the mechanism of simple large-scale
temperature control alone might not be sufficient to explain water vapour
distributions by themselves as air masses in the Asian Monsoon UTLS are generally about 20 <inline-formula><mml:math id="M1" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula>–50 <inline-formula><mml:math id="M2" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> supersaturated
<xref ref-type="bibr" rid="bib1.bibx31" id="paren.12"><named-content content-type="pre">e.g.</named-content></xref>. In the case of the North American Monsoon Anticyclone (NAMA), there is less understanding of the water vapour signal observed, which is much stronger than for air under purely saturated conditions
<xref ref-type="bibr" rid="bib1.bibx17" id="paren.13"/>. However, as the anticyclonic circulation in the
UTLS of the North American Monsoon is much weaker, the sensitivity to processes also present in the Asian Monsoon, such as convection, is different
<xref ref-type="bibr" rid="bib1.bibx4 bib1.bibx55" id="paren.14"/>. Thus, besides tropical cold-point
temperatures, multiple other factors influence the transport of water vapour
to the LS.</p>
      <p id="d1e215">The impact of convection has been the focus of several studies but remains
controversial. While
<xref ref-type="bibr" rid="bib1.bibx4" id="text.15"/>, <xref ref-type="bibr" rid="bib1.bibx5" id="text.16"/>, <xref ref-type="bibr" rid="bib1.bibx70" id="text.17"/> and
<xref ref-type="bibr" rid="bib1.bibx15" id="text.18"/> found that convection, and especially
overshooting events, increase the LS water vapour signal over the monsoon
regions, other studies emphasized that the main role of convection is related
to changes in diabatic heating rates and, hence, the dynamical structure of
the region
<xref ref-type="bibr" rid="bib1.bibx16 bib1.bibx42 bib1.bibx61 bib1.bibx56 bib1.bibx77 bib1.bibx24" id="paren.19"/>. <xref ref-type="bibr" rid="bib1.bibx56" id="text.20"/> found that stronger
convection leads to relatively cold temperatures in the subtropical LS, which
they identified as a key region controlling large-scale dehydration within the
anticyclonic monsoonal circulation, giving rise to a drier
stratosphere. Therefore, it is not clear whether the main role of convection
is to moisten the LS through overshooting events or to dehydrate it by
decreasing the tropopause temperatures.</p>
      <p id="d1e237">Furthermore, <xref ref-type="bibr" rid="bib1.bibx70" id="text.21"/> concluded from Lagrangian
experiments that convective hydration is necessary to explain the water vapour
signal over monsoon regions. On the other hand, <xref ref-type="bibr" rid="bib1.bibx20" id="text.22"/> found
that process to be of second order, and other studies achieved realistic <inline-formula><mml:math id="M3" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> distributions without any convective scheme
<xref ref-type="bibr" rid="bib1.bibx61 bib1.bibx44 bib1.bibx50" id="paren.23"/>. Thus,
this apparent disagreement not only highlights the problem of understanding the role of convection in LS water vapour simulations, but also the impact that
the configuration of a model experiment might have on the LS water vapour
distribution. <xref ref-type="bibr" rid="bib1.bibx61" id="text.24"/> use the model developed by <xref ref-type="bibr" rid="bib1.bibx59" id="text.25"/> based on the domain-filling Lagrangian
technique.  This approach is based on the philosophy that LS water vapour
depends on the processes acting in the upper troposphere and in the tropopause
region and therefore assumes only a minor role of the lower- to mid-tropospheric water vapour distribution and the specific model set-up of air
parcel release at locations close to but below the tropopause. This approach has been successfully applied to answer many questions related to the water vapour
distribution in the TTL <xref ref-type="bibr" rid="bib1.bibx59 bib1.bibx60 bib1.bibx61 bib1.bibx64 bib1.bibx66 bib1.bibx63 bib1.bibx77 bib1.bibx73" id="paren.26"/>, but it has never been compared in detail
to consistent models covering the whole troposphere as well.</p>
      <p id="d1e273">Another relevant process to the water vapour budget is ice microphysics (in
particular, sedimentation and detrainment) in the UTLS related to the
formation of cirrus clouds. Ice could be convectively lofted
<xref ref-type="bibr" rid="bib1.bibx2 bib1.bibx5 bib1.bibx7 bib1.bibx70 bib1.bibx72 bib1.bibx63" id="paren.27"/> or in situ formed
<xref ref-type="bibr" rid="bib1.bibx72 bib1.bibx44 bib1.bibx31" id="paren.28"/>. In the first
case, it is not clear whether evaporation of ice injected into the LS by
overshoots leads to a moistening of the LS
<xref ref-type="bibr" rid="bib1.bibx2 bib1.bibx72" id="paren.29"/> or not
<xref ref-type="bibr" rid="bib1.bibx70" id="paren.30"/>.  In the second case, cirrus clouds form in cold
regions of the UTLS <xref ref-type="bibr" rid="bib1.bibx15" id="paren.31"/>, decreasing the water
vapour present. However, depending on their properties, such as their
thickness, cirrus clouds could lead to a warming of these regions
<xref ref-type="bibr" rid="bib1.bibx31" id="paren.32"/>. This agrees with <xref ref-type="bibr" rid="bib1.bibx44" id="text.33"/>, which
showed from model simulations that evaporation of ice in the UTLS increases
the water vapour everywhere, including the Asian Monsoon region. However, the
relative role of this process, in contrast with other mechanisms, not only in net water vapour in monsoon anticyclones but also in its variability, has not been fully assessed yet.</p>
      <?pagebreak page9587?><p id="d1e298">Turbulence and the associated small-scale mixing result in diffusivity in the UTLS, which affects the transport of trace gas constituents, including water
vapour, into the LS
<xref ref-type="bibr" rid="bib1.bibx48" id="paren.34"/>. <xref ref-type="bibr" rid="bib1.bibx28" id="text.35"/> showed that a
parameterization of the small-scale mixing between nearby air masses based on
the strain- and shear-induced deformation of the large-scale flow led to an enhancement of cross-tropopause transport in the monsoon regions and in
particular in the Asian Monsoon. This mechanism has been invoked to explain
observed tracer distributions in the UTLS <xref ref-type="bibr" rid="bib1.bibx41" id="paren.36"/>. As flow
deformation is commonly found in the vicinity of the subtropical jet stream,
which is very close to the tropopause, air masses tend to mix in these
regions. As a consequence, air masses reach the LS with higher water vapour
content, avoiding in some cases the coldest temperatures of the tropopause
<xref ref-type="bibr" rid="bib1.bibx50" id="paren.37"/>. However, as reported by
<xref ref-type="bibr" rid="bib1.bibx50" id="text.38"/> and <xref ref-type="bibr" rid="bib1.bibx57" id="text.39"/>, the final
impact of mixing on water vapour largely depends on the mixing strength
predefined in their simulations and is thus highly uncertain.</p>
      <p id="d1e320">At mid-stratospheric levels, methane oxidation acts as a source of water
vapour. Through the downwelling branch of the Brewer–Dobson circulation,
these moistened air masses are transported into the LS and partly are further recirculated into the tropics <xref ref-type="bibr" rid="bib1.bibx44" id="paren.40"/>. Despite the fact
that this horizontal transport is not as strong as in the opposite direction,
it has a non-negligible impact on the monsoon regions.</p>
      <p id="d1e326">In this study, we use the Chemical Lagrangian Model of the Stratosphere
(CLaMS) <xref ref-type="bibr" rid="bib1.bibx36 bib1.bibx35 bib1.bibx27" id="paren.41"/> with the
aim of describing and quantifying the contributions of the different physical
processes to the water vapour distribution in the lower stratosphere and
particularly over the Asian and American monsoons. For this purpose, we have
performed five experiments to analyse the role of each of the following
processes: large-scale temperatures, methane chemistry, ice microphysics
(including effects of ice sedimentation and nucleation barrier), small-scale
mixing processes, and in particular vertical tropospheric mixing (likely
related to convection).  Furthermore, we also assess the sensitivity of the LS
water vapour signal to the domain-filling technique developed by
<xref ref-type="bibr" rid="bib1.bibx59" id="text.42"/>. This approach has been widely used in the
recent past
<xref ref-type="bibr" rid="bib1.bibx77 bib1.bibx66 bib1.bibx73" id="paren.43"><named-content content-type="pre">i.e.</named-content></xref>, but the effects of this set-up on simulated water vapour distributions have not been
studied in detail yet. To shed more light on the related effects, we developed
a model version of CLaMS analogous to this forward-trajectory domain-filling approach, configured all the sensitivity experiments based on this model set-up and compared them with a multi-decadal full-blown chemistry transport model
CLaMS simulation as used in <xref ref-type="bibr" rid="bib1.bibx27" id="text.44"/>, <xref ref-type="bibr" rid="bib1.bibx8" id="text.45"/> and <xref ref-type="bibr" rid="bib1.bibx68" id="text.46"/>. Besides, we used satellite observations from Aura Microwave Limb Sounder (MLS) to assess the reliability of each simulation.</p>
      <p id="d1e350">The remainder of the paper is organized as follows. In Sect. 2, we present the
domain-filling technique, the data and the configuration of the different
experiments. In Sect. 3, we evaluate the different experiments in simulating
LS water vapour and how they capture the variability of the water vapour
signal over the Asian and North American monsoon regions. Finally, in Sect. 4,
we discuss the relevance of the processes to simulate the water vapour signal
and also the differences in water vapour found using the domain-filling
technique and the standard version of CLaMS. It should be noted that we do not
aim to provide a most realistic model here but rather carry out simplified
sensitivity experiments to present estimates of the effects of various
processes to be potentially included in models simulating water vapour in the
monsoon UTLS.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Data and methodology</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>The CLaMS model</title>
      <p id="d1e368">To evaluate the sensitivity of lower stratospheric water vapour over monsoon
regions to different physical processes, we use the Chemical Lagrangian
transport model CLaMS <xref ref-type="bibr" rid="bib1.bibx36 bib1.bibx27" id="paren.47"/>. This model
simulates the three-dimensional trajectories of an ensemble of air parcels
forward in time as well as the changes in the chemical composition of the air parcels along them. CLaMS has a modular structure that allows different
parameterizations or new configurations to be easily implemented. Thus, the
sensitivity of the water vapour distribution to each parameterization can be
studied easily by switching them on and off.</p>
      <p id="d1e374">The CLaMS model has been widely used to study the distribution of several
tracers in the stratosphere <xref ref-type="bibr" rid="bib1.bibx57" id="paren.48"/>, including recent studies
on water vapour in the lower stratosphere <xref ref-type="bibr" rid="bib1.bibx68 bib1.bibx50" id="paren.49"/>. Previous studies have shown that the model
properly simulates the variability of the stratospheric water vapour
<xref ref-type="bibr" rid="bib1.bibx8 bib1.bibx68" id="paren.50"/> and the water vapour
distribution over monsoon regions during boreal summer
<xref ref-type="bibr" rid="bib1.bibx50" id="paren.51"/>, highlighting the efficiency of these
regions in transporting air masses and water vapour into the TTL <xref ref-type="bibr" rid="bib1.bibx46 bib1.bibx40 bib1.bibx75" id="paren.52"/>.</p>
      <p id="d1e392">All experiments performed for the present study use 6-hourly winds and
temperature from the European Centre for Medium-Range Weather Forecasts (ECMWF) ERA-Interim reanalysis <xref ref-type="bibr" rid="bib1.bibx3" id="paren.53"/>. The model uses a vertical hybrid
coordinate that follows the orography with a <inline-formula><mml:math id="M4" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula> coordinate at the ground that transforms into potential temperature in the upper troposphere. Above
<inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula> (about 300 <inline-formula><mml:math id="M6" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> in regions without strong orography), the
vertical coordinate is purely isentropic. Cross-isentropic transport is
simulated using total diabatic heating rates (considering all-sky radiation,
latent heat release, and diffusive and turbulent heat transport as detailed by <xref ref-type="bibr" rid="bib1.bibx13" id="altparen.54"/>) from ERA-Interim forecast data, as described in <xref ref-type="bibr" rid="bib1.bibx43" id="text.55"/>. For the sake of the analysis,
simulated water vapour content of air parcels is daily gridded into maps with
bin size 5<inline-formula><mml:math id="M7" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> longitude <inline-formula><mml:math id="M8" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 2<inline-formula><mml:math id="M9" display="inline"><mml:msup><mml:mi/><mml:mo>∘<?pagebreak page9588?></mml:mo></mml:msup></mml:math></inline-formula> latitude at a given pressure or potential temperature level with a thickness of 10 <inline-formula><mml:math id="M10" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> or
K, respectively. Hence, daily distributions of water vapour at 100 <inline-formula><mml:math id="M11" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>
are the result of averaging air parcels found between 105 and 95 <inline-formula><mml:math id="M12" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Domain-filling set-up</title>
      <p id="d1e491">To create a common framework between previous studies focusing on the
simulation of stratospheric water vapour <xref ref-type="bibr" rid="bib1.bibx61 bib1.bibx77 bib1.bibx73" id="paren.56"/> and our CLaMS sensitivity experiments, we
have implemented the forward domain-filling technique, here referred to as Lagrangian trajectory filling (LTF), in CLaMS. This set-up, introduced by <xref ref-type="bibr" rid="bib1.bibx59" id="text.57"/>, has been widely used to study different
properties of water vapour in the stratosphere and UTLS region
<xref ref-type="bibr" rid="bib1.bibx60 bib1.bibx61 bib1.bibx64 bib1.bibx66 bib1.bibx63 bib1.bibx6 bib1.bibx77 bib1.bibx76" id="paren.58"/>. In this approach, air parcels
are continuously launched at a given level below the tropopause, and their trajectories are calculated forward in time until they leave the domain of
interest, here bounded by the surfaces <inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">250</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M14" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> (lower boundary)
and <inline-formula><mml:math id="M15" display="inline"><mml:mrow><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1800</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M16" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>. After a spin-up time during which the number of
tracked air parcels increases, an equilibrium state is reached in which the
release of new air parcels balances removal at the boundaries. At that point,
due to the structure of the large-scale stratospheric circulation, the whole
domain is filled with air parcels.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e547">Description of experiments done with CLaMS.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.91}[.91]?><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="justify" colwidth="60mm"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Experiment</oasis:entry>
         <oasis:entry colname="col2">Configuration</oasis:entry>
         <oasis:entry colname="col3">Time step</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M17" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> at 360 K</oasis:entry>
         <oasis:entry colname="col5">No. of air parcels</oasis:entry>
         <oasis:entry colname="col6">Further details</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">TRAJ</oasis:entry>
         <oasis:entry colname="col2">LTF</oasis:entry>
         <oasis:entry colname="col3">6 <inline-formula><mml:math id="M18" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">None</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">412</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">000</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">Pure advective trajectories using ERA-Interim</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">horizontal wind fields and diabatic heating rate.</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">CHEM</oasis:entry>
         <oasis:entry colname="col2">TRAJ <inline-formula><mml:math id="M20" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> chemistry module</oasis:entry>
         <oasis:entry colname="col3">6 <inline-formula><mml:math id="M21" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">50</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M22" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">412</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">000</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">Only methane oxidation</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">CIRRUS</oasis:entry>
         <oasis:entry colname="col2">CHEM <inline-formula><mml:math id="M23" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> cirrus scheme</oasis:entry>
         <oasis:entry colname="col3">6 <inline-formula><mml:math id="M24" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">50</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M25" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">412</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">000</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">Characteristic length set to <inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">300</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M27" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">SSMIX</oasis:entry>
         <oasis:entry colname="col2">CIRRUS <inline-formula><mml:math id="M28" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> small-scale mixing</oasis:entry>
         <oasis:entry colname="col3">24 <inline-formula><mml:math id="M29" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">50</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> 026 000</oasis:entry>
         <oasis:entry colname="col6">After mixing, cirrus scheme is applied again</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">VMIX</oasis:entry>
         <oasis:entry colname="col2">SSMIX <inline-formula><mml:math id="M31" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> tropospheric mixing</oasis:entry>
         <oasis:entry colname="col3">24 <inline-formula><mml:math id="M32" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">50</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> 026 000</oasis:entry>
         <oasis:entry colname="col6">After mixing, cirrus scheme is applied again</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">STANDARD</oasis:entry>
         <oasis:entry colname="col2">SSMIX <inline-formula><mml:math id="M34" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ST-Filling</oasis:entry>
         <oasis:entry colname="col3">24 <inline-formula><mml:math id="M35" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">ERA-Interim</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> 000 000</oasis:entry>
         <oasis:entry colname="col6">After mixing, cirrus scheme is applied again.</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">Full chemistry (see <xref ref-type="bibr" rid="bib1.bibx35" id="altparen.60"/>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">No-LTF set-up</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">Water vapour fields from ERA-Interim</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">in troposphere below 500 <inline-formula><mml:math id="M37" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>.</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table><table-wrap-foot><p id="d1e550"><italic>Time step</italic> specifies the frequency of the output in each experiment. No. of air parcels is the mean number of air parcels per day after 2 years of spin-up time. LTF (<italic>Lagrangian</italic><?xmltex \hack{\\}?><italic>trajectory filling set-up</italic>): based in the domain-filling technique developed by <xref ref-type="bibr" rid="bib1.bibx59" id="text.59"/>. ERA-Interim reanalysis from the European Centre for Medium-Range<?xmltex \hack{\\}?>Weather Forecasts.</p></table-wrap-foot></table-wrap>

      <p id="d1e1007">Our set-up closely follows that of <xref ref-type="bibr" rid="bib1.bibx59" id="text.61"/>. Once a
day (at 12:00 <inline-formula><mml:math id="M38" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">UTC</mml:mi></mml:mrow></mml:math></inline-formula>), air parcels are released on a regular
5<inline-formula><mml:math id="M39" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> longitude <inline-formula><mml:math id="M40" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 2<inline-formula><mml:math id="M41" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitude grid spanning the 60<inline-formula><mml:math id="M42" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> S–60<inline-formula><mml:math id="M43" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> N latitudinal band. We initialize on
the <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">360</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M45" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> surface, which is, on average, above the level of
zero radiative heating (LZRH) <xref ref-type="bibr" rid="bib1.bibx15" id="paren.62"/> but below the
tropical tropopause (<inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">375</mml:mn></mml:mrow></mml:math></inline-formula>–380 <inline-formula><mml:math id="M47" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>). We simulate the period from
2005 to 2016. The spin-up time is about 2 years, similar to
<xref ref-type="bibr" rid="bib1.bibx59" id="text.63"/>. In pure LTF simulations, the equilibrium
number of tracked air parcels is about 400 000 <xref ref-type="bibr" rid="bib1.bibx59" id="paren.64"><named-content content-type="pre">500 000
in</named-content></xref>, but in the case of experiments including small-scale mixing parameterizations, that number increases to 1.6 million
(Table <xref ref-type="table" rid="Ch1.T1"/>) due to the spawning of new parcels inside the
domain, which adds up to the release at <inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">360</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M49" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Experiments</title>
      <p id="d1e1148">We performed five LTF experiments with CLaMS. A summary of all experiments is
provided in Table <xref ref-type="table" rid="Ch1.T1"/>. This set of experiments is configured
in such a way that the tested parameterizations are added cumulatively,
increasing the complexity of the simulations and number of included processes
step by step.</p><?xmltex \hack{\newpage}?>
<sec id="Ch1.S2.SS3.SSS1">
  <label>2.3.1</label><title>Pure trajectory (LTF) experiments: TRAJ, CHEM and CIRRUS</title>
      <p id="d1e1161">The first set of three experiments (called TRAJ, CHEM and CIRRUS) uses a pure LTF with advective trajectories launched exclusively at
<inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">360</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M51" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>. While they are based on the same trajectories and
hence transport, they differ in their treatment of chemical and microphysical
processes impacting water vapour.</p>
      <p id="d1e1184">In TRAJ, chemistry and detailed microphysics are essentially ignored. Air
parcels are initialized with 50 <inline-formula><mml:math id="M52" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> water vapour at the launch
level. Thereafter, water vapour in excess of saturation (100 <inline-formula><mml:math id="M53" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula>
relative humidity, RH) is removed at each time step. From a microphysical point of view, this is equivalent to assuming instantaneous formation and fall-out
of all ice particles at 100 <inline-formula><mml:math id="M54" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> RH. Note that this approach is, in
practice, equivalent to setting to the lowest saturation mixing ratio (LMR) encountered by the air parcel along its trajectory, as in
<xref ref-type="bibr" rid="bib1.bibx11" id="text.65"/>. Saturation mixing ratios over ice are
estimated from the 6-hourly ERA-Interim temperature and pressure following <xref ref-type="bibr" rid="bib1.bibx39" id="text.66"/>.</p>
      <p id="d1e1217">In CHEM, the moistening effect of methane oxidation is included by applying
the CLaMS chemistry module <xref ref-type="bibr" rid="bib1.bibx49" id="paren.67"/>. The corresponding
reactions are a significant source of water vapour in the middle and upper
stratosphere. The methane mixing ratio at launch level is taken to be
1.7 <inline-formula><mml:math id="M55" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula>, following <xref ref-type="bibr" rid="bib1.bibx61" id="text.68"/>. As in TRAJ, water
vapour in excess of 100 <inline-formula><mml:math id="M56" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> relative humidity is removed at each time
step.  The CLaMS dehydration scheme <xref ref-type="bibr" rid="bib1.bibx71" id="paren.69"><named-content content-type="pre">for details, see</named-content></xref> is configured equivalently to the LMR calculation in the basic TRAJ
case. Therefore, an air parcel is set to saturation whenever its water vapour
content is above 100 <inline-formula><mml:math id="M57" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> of RH, following <xref ref-type="bibr" rid="bib1.bibx34" id="text.70"/>, which is similar to <xref ref-type="bibr" rid="bib1.bibx39" id="text.71"/>.</p>
      <p id="d1e1262">The third experiment, CIRRUS, applies the same initialization and simplified
chemistry as CHEM. However, it also takes into account the ice phase (although
simplified): in case of supersaturation, excess water vapour is
instantaneously transferred to the ice phase, instead of being removed, as
described in <xref ref-type="bibr" rid="bib1.bibx71" id="text.72"/>. Then, a mean (spherical) ice particle
size and the corresponding settling velocity are computed using an empirically
defined ice particle density (not temperature-dependent) based on in situ
observations <xref ref-type="bibr" rid="bib1.bibx30" id="paren.73"/>. The calculated sedimentation length of the
ice particles during one time step is compared to a characteristic length
(<inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">300</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M59" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, optimized by <xref ref-type="bibr" rid="bib1.bibx44" id="altparen.74"/>) to yield
the fraction of ice removed from the air parcel (e.g. if the sedimentation length is one-third of the characteristic length, 30 <inline-formula><mml:math id="M60" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> of the ice is assumed to fall out). If during the following time steps an air parcel turns
out to be subsaturated and ice exists, all ice evaporates till the air parcel
reaches saturation.</p>
      <p id="d1e1302">It should be noted that this simplified microphysics scheme does not resolve
the nucleation and growth of the<?pagebreak page9589?> ice particles, only their
sedimentation. Consistently, it also does not include the effect of
temperature fluctuations due to gravity waves <xref ref-type="bibr" rid="bib1.bibx21" id="paren.75"/> unresolved in
the reanalysis. Although those are ubiquitous
<xref ref-type="bibr" rid="bib1.bibx47 bib1.bibx65" id="paren.76"><named-content content-type="pre">e.g.</named-content></xref>, it is not straightforward to
include them in the simplified microphysics scheme, in particular due to their
complicated interaction with ice nucleation and ice crystal number density
<xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx22" id="paren.77"/>. Furthermore, earlier studies have argued that
their impact on water vapour itself is marginal <xref ref-type="bibr" rid="bib1.bibx10" id="paren.78"/>
and that they mainly affect the ice cloud cover
<xref ref-type="bibr" rid="bib1.bibx62 bib1.bibx66" id="paren.79"><named-content content-type="pre">e.g.</named-content></xref>. We therefore refrain from including gravity-wave-induced temperature fluctuations but regard them as an additional uncertainty for our study.</p>
</sec>
<sec id="Ch1.S2.SS3.SSS2">
  <label>2.3.2</label><title>Experiments including small-scale mixing effects: SSMIX, VMIX and STANDARD</title>
      <p id="d1e1332">One of the key features of the CLaMS model is its parameterization of
small-scale mixing processes <xref ref-type="bibr" rid="bib1.bibx36 bib1.bibx27 bib1.bibx28" id="paren.80"/>. This parameterization has been proposed to include
the effects of small-scale mixing on tracer distributions, mainly in regions
where large-scale flow deformations occur <xref ref-type="bibr" rid="bib1.bibx27 bib1.bibx28 bib1.bibx41" id="paren.81"/>.</p>
      <p id="d1e1341">Details about the mixing parameterization and its consequence in terms of
diffusivity can be found in
<xref ref-type="bibr" rid="bib1.bibx36" id="text.82"/>, <xref ref-type="bibr" rid="bib1.bibx27" id="text.83"/>, <xref ref-type="bibr" rid="bib1.bibx28" id="text.84"/> and <xref ref-type="bibr" rid="bib1.bibx50" id="text.85"/>, and we only briefly summarize the
governing principle here. The relative position of each parcel and its nearest
neighbour are tracked during advection by the reanalysis wind over a
24 <inline-formula><mml:math id="M61" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">h</mml:mi></mml:mrow></mml:math></inline-formula> time step. Due to vertical wind shear and horizontal deformation,
the horizontal distance between the air parcel and its nearest neighbours
after advection changes. If this distance falls below a threshold distance
<inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mo>-</mml:mo></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mi>c</mml:mi></mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, both air parcels are merged into one
parcel at the midpoint. If the distance exceeds <inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mo>+</mml:mo></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>r</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mi>c</mml:mi></mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, a new air parcel is inserted in the middle. This adaptive
regridding is the core piece of the mixing scheme and ensures that the
horizontal distance between parcels remains of the order of <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> while
allowing for some deformation. The composition of the new air parcel, i.e. its
mixing ratios of water vapour, methane and ice, is set to the average of the
mixing ratios of the parcels that experienced mixing.</p>
      <p id="d1e1442">The fourth experiment, SSMIX, adds the small-scale mixing parameterization of
CLaMS to the processes represented in CIRRUS. After a mixing event, the same
dehydration scheme as in CIRRUS is applied again to remove the supersaturation
that may have been introduced in new air parcels due to the mixing and
bypassing cold temperatures. Transient temperature fluctuations in turbulent layers are neglected but are likely short-lived and not causing a significant effect.</p>
      <p id="d1e1445">The fifth experiment, called VMIX, includes enhanced tropospheric mixing
recently developed by <xref ref-type="bibr" rid="bib1.bibx29" id="text.86"/>. This additional
parameterization relates tropospheric mixing to unresolved convective
instability. In this VMIX experiment, air parcels with a (moist)
Brunt–Väisälä frequency, <inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:msubsup><mml:mi>N</mml:mi><mml:mi>m</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>, larger than a
predefined value, <inline-formula><mml:math id="M66" display="inline"><mml:mrow><mml:msubsup><mml:mi>N</mml:mi><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.0001</mml:mn><mml:msup><mml:mi>s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, undergo tropospheric mixing with
their nearest neighbours: their chemical composition is changed to the
averaged mixing ratios of all the parcels involved in the mixing
process. Contrary to the standard mixing scheme, this procedure does not
change the position of the air parcels.</p>
      <?pagebreak page9590?><p id="d1e1490">Finally, besides the above experiments based on the LTF set-up, we consider
the full-blown chemistry transport model standard version of CLaMS (STANDARD)
<xref ref-type="bibr" rid="bib1.bibx8 bib1.bibx68" id="paren.87"/>. This simulation includes
the same parameterizations as SSMIX but has a different initialization. The air parcels are released at the beginning of the simulation throughout the
domain, covering both the troposphere and stratosphere, with a horizontal
resolution of about 100 <inline-formula><mml:math id="M67" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> in the UTLS <xref ref-type="bibr" rid="bib1.bibx29" id="paren.88"><named-content content-type="pre">for details, see e.g.</named-content></xref>. Once released, trajectories of air parcels are computed using reanalysis horizontal wind fields and diabatic heating
rates for vertical transport. When air parcels are in the troposphere below
about 500 <inline-formula><mml:math id="M68" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, their water vapour content is interpolated from
ERA-Interim, while methane is derived from ground-level observations. The CLaMS dehydration and chemistry schemes are applied, configured consistently with
the CIRRUS experiment. Note that, contrary to the LTF technique, the boundary of the model is the surface such that air parcels are not filtered out when
they reach below 250 <inline-formula><mml:math id="M69" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> or above 1800 <inline-formula><mml:math id="M70" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> (as in the LTF
experiments), and the water vapour content of air parcels at 360 <inline-formula><mml:math id="M71" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> is
not fixed uniformly to 50 <inline-formula><mml:math id="M72" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> but calculated consistently in the
model.  Here we will refer to this set-up as “Stratosphere–Troposphere Filling” (ST-Filling). Further details of the initialization can be found in
<xref ref-type="bibr" rid="bib1.bibx49" id="text.89"/>.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Aura MLS observations</title>
      <p id="d1e1562">Satellite observations of water vapour mixing ratios in the LS from Aura
Microwave Limb Sounder <xref ref-type="bibr" rid="bib1.bibx74" id="paren.90"/> are used to further assess the
results. We use version 4.2 of the water vapour data from MLS <xref ref-type="bibr" rid="bib1.bibx32" id="paren.91"/>, which has been fully described in
<xref ref-type="bibr" rid="bib1.bibx33" id="text.92"/>. These water vapour products have been validated in several studies and recently have been part of a climatological overview of
the Asian Monsoon Anticyclone <xref ref-type="bibr" rid="bib1.bibx58" id="paren.93"/>. Here, Aura MLS data and CLaMS data have been compiled on the same regular latitude–longitude grid as the one used by the experiments. In particular, we use the MLS data on
100 and 82 <inline-formula><mml:math id="M73" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> pressure levels and compare them to the simulated water vapour distributions at 100 and 80 <inline-formula><mml:math id="M74" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, respectively. Since we are
interested in differences between set-ups, we did not apply the averaging
kernels to the model outputs to avoid potential smearing out of fine-scale patterns. We note that applying the averaging kernels of MLS does not change
the pattern of water vapour in the lower stratosphere during boreal summer.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Boreal summer climatology of lower stratospheric water vapour</title>
      <p id="d1e1610">Figure <xref ref-type="fig" rid="Ch1.F1"/>a–g show the climatological water vapour distribution at 100 <inline-formula><mml:math id="M75" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> during June–August (JJA) over the
2007–2016 period in the different CLaMS experiments and MLS observations
(i.e. excluding the spin-up). A similar figure for 80 <inline-formula><mml:math id="M76" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> is presented in Fig. <xref ref-type="fig" rid="Ch1.F2"/>. All experiments
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>b–f) reproduce the main characteristics
of the water vapour distribution found in MLS. The contrast between the dry
tropics and subtropics and the moister mid and high latitudes seen in MLS is
present in all simulations. Furthermore, all experiments, including TRAJ,
exhibit a local maximum in the Asian Monsoon Anticyclone (AMA). This
consistency between the different experiments emphasizes the key role of
transport through the large-scale temperature field in causing this feature <xref ref-type="bibr" rid="bib1.bibx20" id="paren.94"><named-content content-type="pre">as found in e.g.</named-content></xref>. However, there are also important differences between the experiments and with MLS observations. Compared with
MLS (Fig. <xref ref-type="fig" rid="Ch1.F1"/>a), experiments with the LTF scheme
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>b–f) underestimate the water vapour
content in the moistest regions. This underestimation reaches 1.5 to
2 <inline-formula><mml:math id="M77" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> in the case of TRAJ, pointing either to biases in large-scale transport and temperatures in ERA-Interim or to missing processes, as expected. The dry bias is reduced in the more sophisticated experiments which
include more processes. In addition, there is a misrepresentation of the NAMA in all experiments, which tend to show a
weaker maximum shifted towards the eastern and central Pacific with respect to
observations.  It should be noted that at 80 <inline-formula><mml:math id="M78" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> the agreement between
STANDARD and MLS is much better (Fig. <xref ref-type="fig" rid="Ch1.F2"/>). Larger
differences at 100 <inline-formula><mml:math id="M79" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> are likely related to the fact that this lower
pressure level is partly in the stratosphere and partly in the troposphere
(e.g. in the Asian Monsoon where the tropopause is frequently above 100 <inline-formula><mml:math id="M80" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>). Small biases in reanalysis tropopause height can therefore cause large biases in simulated water vapour at 100 <inline-formula><mml:math id="M81" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, while at
80 <inline-formula><mml:math id="M82" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> their effect is marginal. Nevertheless, we focus our results at
100 <inline-formula><mml:math id="M83" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> here as this is the most frequently considered level for
investigating the monsoon UTLS, and further our goal is not to identify a
best-case simulation scenario but to estimate the effects of different
processes from the sensitivity simulations, and these estimates are very
similar at 100 and 80 <inline-formula><mml:math id="M84" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e1714"><bold>(a–g)</bold> Climatology of water vapour distribution at 100 <inline-formula><mml:math id="M85" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>
during boreal summer (June–July–August) for the period 2007–2016 from <bold>(a)</bold> Aura MLS v4.2 observations, <bold>(b)</bold> TRAJ, <bold>(c)</bold> CHEM,
<bold>(d)</bold> CIRRUS, <bold>(e)</bold> VMIX, <bold>(f)</bold> SSMIX and <bold>(g)</bold>
STANDARD simulations. <bold>(h–l)</bold> Isolated effect of <bold>(h)</bold> methane oxidation, <bold>(i)</bold> cirrus, <bold>(j)</bold> small-scale mixing, <bold>(k)</bold> enhanced tropospheric mixing and <bold>(l)</bold> no-LTF scheme.
Air parcels have been binned to a 5<inline-formula><mml:math id="M86" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> longitude <inline-formula><mml:math id="M87" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 2<inline-formula><mml:math id="M88" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> latitude grid.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f01.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e1803"><bold>(a–g)</bold> Climatology of water vapour distribution at 80 <inline-formula><mml:math id="M89" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> during boreal summer (JJA) for the period 2007–2016 from <bold>(a)</bold> Aura MLS v4.2 observations, <bold>(b)</bold> TRAJ, <bold>(c)</bold>  CHEM, <bold>(d)</bold> CIRRUS, <bold>(e)</bold> VMIX, <bold>(f)</bold> SSMIX experiments and <bold>(g)</bold> STANDARD simulation. <bold>(h–l)</bold> Isolated effect of each <bold>(h)</bold> chemistry, <bold>(i)</bold> cirrus, <bold>(j)</bold> small-scale mixing, <bold>(k)</bold> enhanced tropospheric mixing and <bold>(l)</bold> no-LTF scheme. Air parcels have been binned to a 5<inline-formula><mml:math id="M90" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> longitude <inline-formula><mml:math id="M91" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 2<inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitude grid.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f02.png"/>

        </fig>

      <p id="d1e1890">In order to separate the effect of each parameterization,
Fig. <xref ref-type="fig" rid="Ch1.F1"/>h–l display the differences between pairs of experiments which share the same configuration except for one single
process parameterization. Thus, Fig. <xref ref-type="fig" rid="Ch1.F1"/>h (CHEM
minus TRAJ) isolates the impact of methane oxidation, which is only included
in CHEM (see Table <xref ref-type="table" rid="Ch1.T1"/>). Similarly,
Fig. <xref ref-type="fig" rid="Ch1.F1"/>i–k show the impact of the simplified
ice microphysics (cirrus) parameterization (CIRRUS-CHEM), small-scale mixing
(SSMIX-CIRRUS) and enhanced tropospheric mixing (VMIX-SSMIX), respectively.</p>
      <p id="d1e1901">Regarding methane oxidation, Fig. <xref ref-type="fig" rid="Ch1.F1"/>h shows a
water vapour increase of around <inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M94" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> over the tropics and
subtropics that reaches <inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M96" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> over high latitudes, as
expected. As methane oxidation occurs at mid-stratospheric levels
<xref ref-type="bibr" rid="bib1.bibx53" id="paren.95"/>, its impact on the water vapour distribution at
100 <inline-formula><mml:math id="M97" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F1"/>h) is a consequence of
air parcels moving downward from those altitudes following the downwelling
branch of the Brewer–Dobson circulation at high latitudes. During boreal
summer, the downward circulation is stronger in the Southern Hemisphere, which
explains the larger increase in water vapour in this region. Once air parcels reach the lower stratosphere at high latitudes, some of them may reach the
troposphere below 250 <inline-formula><mml:math id="M98" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, where they are removed from the simulation,
while others follow<?pagebreak page9591?> the residual meridional circulation giving rise to the
observed subtropical and tropical enhancements of water vapour at
100 <inline-formula><mml:math id="M99" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>. This weak meridional transport was also observed by
<xref ref-type="bibr" rid="bib1.bibx44" id="text.96"/> and <xref ref-type="bibr" rid="bib1.bibx50" id="text.97"/>. A
similar impact of methane oxidation can be found at 80 <inline-formula><mml:math id="M100" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> in spite of
the stronger meridional gradient at this pressure level
(Fig. <xref ref-type="fig" rid="Ch1.F2"/>).</p>
      <?pagebreak page9592?><p id="d1e1989">Including our simplified representation of ice microphysics
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>i) results in a further moistening of
the LS ranging from <inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M103" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> over most regions. These
values are in agreement with the global increase of <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M105" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> found
by <xref ref-type="bibr" rid="bib1.bibx44" id="text.98"/> and exceed the effect related to
methane. Moreover, Fig. <xref ref-type="fig" rid="Ch1.F1"/>i shows that the
effects of ice are especially large in the AMA (about <inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M107" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> at
100 <inline-formula><mml:math id="M108" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>), enhancing the moisture anomaly in the monsoon UTLS. This
signature is also found at 80 <inline-formula><mml:math id="M109" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> but with slightly weaker values
compared to 100 <inline-formula><mml:math id="M110" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F2"/>i).</p>
      <?pagebreak page9593?><p id="d1e2091">Small-scale mixing has a similar impact
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>j), increasing water vapour at latitudes
north of 30<inline-formula><mml:math id="M111" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> S and especially in the AMA. Outside of the AMA,
the water vapour increase linked to small-scale mixing is slightly weaker than
that attributed to ice microphysics (<inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M114" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula>). The
local impact on water vapour in the AMA region, however, is stronger and
reaches values above <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M116" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> at 100 <inline-formula><mml:math id="M117" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>. This strong
moistening effect can be attributed to the fact that mixing processes are more
frequent in regions with large-scale flow deformations, which are mainly located in the surroundings of the subtropical jet
<xref ref-type="bibr" rid="bib1.bibx26 bib1.bibx50" id="paren.99"/> and hence in the AMA.</p>
      <p id="d1e2164">The effects of the enhanced mixing in the troposphere as represented in the
VMIX experiment are shown in Fig. <xref ref-type="fig" rid="Ch1.F1"/>k. An
increase in water vapour of up to <inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M119" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> occurs almost
everywhere north of 30<inline-formula><mml:math id="M120" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> S, with again a relatively stronger
impact in the AMA, with differences larger than <inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M122" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula>. This
stronger influence in the AMA compared to other regions is also found at
80 <inline-formula><mml:math id="M123" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> but is weaker than at 100 <inline-formula><mml:math id="M124" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>. Compared to other processes, VMIX shows a weak increase in water vapour in the AMA related to the enhanced tropospheric mixing. The reason behind this increase in lower
stratospheric humidity with the mixing parameterizations in SSMIX and VMIX
ultimately lies in the bypassing of cold traps which air parcels would have
otherwise encountered along their slow ascent and the associated horizontal
wandering (for further details, see Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>).</p>
      <p id="d1e2234">The 80 <inline-formula><mml:math id="M125" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> level shows a similar spatial distribution of water vapour
differences to that at 100 <inline-formula><mml:math id="M126" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, with values peaking again in the AMA
(Fig. <xref ref-type="fig" rid="Ch1.F2"/>j). However, the relative strength of
this maximum (<inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M128" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula>) is weaker than at 100 <inline-formula><mml:math id="M129" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e2283">Since mixing changes the temperature encountered by air parcels, the impact of
temperature-dependent processes, such as ice microphysics, is altered. To
evaluate this effect, we have run a 2-year simulation, hereafter called “VMIXnocirrus”, in which all the water vapour in excess of saturation is
instantaneously removed instead of being transferred to the ice phase. The
difference between VMIXnocirrus and VMIX shows the impact of ice transport, as
CIRRUS-CHEM, but with mixing being applied (see
Fig. <xref ref-type="fig" rid="App1.Ch1.S1.F11"/>). Comparing Fig. <xref ref-type="fig" rid="App1.Ch1.S1.F11"/> with
Fig. <xref ref-type="fig" rid="Ch1.F1"/>i, the moistening effect caused by the
inclusion of a simple ice microphysics scheme is amplified with
mixing. Nevertheless, the spatial pattern resembles that of the experiments
without mixing and peaks in the AMA region (with <inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M131" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula>). We
interpret this enhancement of the moistening as being caused by the vertical transport of both ice and a larger vapour content by mixing.  By effectively
bypassing cold traps, mixing favours ice sublimation, which (1) directly increases the water content and (2) decreases the size of the remaining ice
particles and hence their settling velocity, thereby increasing their
residence time and the possibility of subsequent sublimation in warmer
regions. Together with the transport of the larger vapour background content
associated with this set-up, this leads to an enhanced moistening.</p>
      <p id="d1e2310">Finally, the sensitivity of the LS water vapour to the boundary condition
imposed in the LTF set-up is assessed by comparing SSMIX to the full-blown
CLaMS STANDARD experiment. As a reminder, STANDARD uses the same
parameterizations as SSMIX but calculates transport throughout the troposphere using ERA-Interim water vapour values as the lower boundary
condition below about 500 <inline-formula><mml:math id="M132" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>. Thus, contrary to the LTF
initialization, the water vapour content of the air parcels at 360 <inline-formula><mml:math id="M133" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>
depends on the transport properties of the air parcels reaching that
level. Figure <xref ref-type="fig" rid="Ch1.F1"/> depicts the water vapour
distribution obtained for the STANDARD simulation (panel g) and its
differences with respect to SSMIX (panel l). The STANDARD simulation exhibits
a much wetter stratosphere than SSMIX, which leads to a weak overestimation of
the water vapour compared to MLS, in particular in the AMA region. However, at
80 <inline-formula><mml:math id="M134" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> there is good agreement between the water vapour field
simulated in STANDARD and MLS
(Fig. <xref ref-type="fig" rid="Ch1.F2"/>g). Figure <xref ref-type="fig" rid="Ch1.F1"/>l
shows that the main differences caused by the LTF scheme are not centered on
the AMA region but on both the western and eastern parts of the North Pacific and in the 20–30<inline-formula><mml:math id="M135" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> S latitude band. At 80 <inline-formula><mml:math id="M136" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>,
differences occur in the same latitude band and expand zonally. This implies
that the global effect of the LTF set-up is to dry the stratosphere compared
to the STANDARD simulation, in particular at the edges of the tropics, and
with smaller differences in the AMA.</p>
      <p id="d1e2362">Concerning the water vapour maximum found over the NAMA in MLS observations,
we found that its spatial pattern is not well reproduced in any of the
experiments (Fig. <xref ref-type="fig" rid="Ch1.F1"/>). The maximum is shifted to
the west compared to MLS over the eastern Pacific and, except for the STANDARD simulation, which shows water vapour values in the NAMA close to the
observations, all other experiments display much lower values. The mixing
parameterization has a much weaker effect in the NAMA compared to the AMA,
which suggests that the weaker anticyclonic monsoon circulation over that
region produces a weaker deformation of the main flow leading to less mixing
between air masses.  The NAMA water vapour maximum seen in MLS is known to be
more challenging to simulate than the AMA
<xref ref-type="bibr" rid="bib1.bibx70" id="paren.100"><named-content content-type="pre">e.g.</named-content></xref>.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Sensitivity to assumptions in the microphysics</title>
      <p id="d1e2380">Ice microphysics in the UTLS is a complex issue, which requires sophisticated
models <xref ref-type="bibr" rid="bib1.bibx21 bib1.bibx70" id="paren.101"/> as well as a series of
assumptions regarding the nature of ice nuclei, the shape of ice particles and
their dynamical environment including convective detrainment and gravity
waves. We have here considered a simple representation of the microphysics (in
CIRRUS and related model experiments), in which the ice phase and water vapour
are kept in thermodynamic equilibrium and ice particle sediment. However, both laboratory experiments and in situ observations
<xref ref-type="bibr" rid="bib1.bibx30 bib1.bibx31" id="paren.102"><named-content content-type="pre">e.g.</named-content></xref> show the common occurrence of large
supersaturations under clear-sky conditions, which is related to a delay of ice nucleation to high supersaturations at low temperatures.</p>
      <p id="d1e2391">For a simple test of the sensitivity of our results to a potential
supersaturation threshold required for ice formation, we performed a second
CIRRUS (pure LTF) simulation, in<?pagebreak page9594?> which ice formation is delayed to a relative
humidity of 150 <inline-formula><mml:math id="M137" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula>. If this value is reached, all vapour in excess of
saturation is condensed into the ice phase (so that the parcel is at
100 <inline-formula><mml:math id="M138" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> relative humidity). Figure <xref ref-type="fig" rid="Ch1.F3"/>
compares the distribution of water vapour during boreal summer averaged for
the period 2005–2010 for CIRRUS with ice formation threshold 100 <inline-formula><mml:math id="M139" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula>
and 150 <inline-formula><mml:math id="M140" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula>. Our results show that by allowing further transport of
water vapour before ice formation, CIRRUS 150 <inline-formula><mml:math id="M141" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> results in a more humid LS everywhere. This moistening effect of increasing the saturation level
is proportional to the local saturation mixing ratio and especially large in
regions in which ice microphysics has a strong signature, such as the AMA and
NAMA.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e2439">Distribution of water vapour at 100 <inline-formula><mml:math id="M142" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> of CIRRUS using <bold>(a)</bold> 100 <inline-formula><mml:math id="M143" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> and <bold>(b)</bold> 150 <inline-formula><mml:math id="M144" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> as the saturation mixing ratio with respect to ice during boreal summer for 2005–2010 and <bold>(c)</bold> their differences.</p></caption>
          <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f03.png"/>

        </fig>

      <p id="d1e2483">It should be kept in mind that in situ ice formation, as represented here, is
only one of the many processes through which ice influences the water vapour
content. Ice may be detrained in the UTLS from deep overshooting convection
and evaporate afterwards, resulting in a net hydration of the UTLS
<xref ref-type="bibr" rid="bib1.bibx2" id="paren.103"/>. However, <xref ref-type="bibr" rid="bib1.bibx23" id="text.104"/> concluded from
observations that this effect is small, except in the NAMA, which may partly
explain the poor model results there. On the other hand, convection also
directly influences the vapour phase, an issue discussed in
Sect. <xref ref-type="sec" rid="Ch1.S4.SS1"/>.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Variability of water vapour over monsoon regions</title>
<sec id="Ch1.S3.SS3.SSS1">
  <label>3.3.1</label><title>Seasonal variability</title>
      <p id="d1e2510">Figure <xref ref-type="fig" rid="Ch1.F4"/> shows the annual cycle at 80 <inline-formula><mml:math id="M145" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>
(top) and 100 <inline-formula><mml:math id="M146" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> (bottom) of the simulated and observed water vapour
in the AMA (left column) and NAMA (right column), averaged over the period
2007–2016. For a proper comparison of the annual cycle and the peak-to-peak change between the different experiments, we have subtracted the respective
April average (hereafter referred to as the offset) from each time
series. April was chosen because this is when, in most experiments, the water
vapour content is closest to its minimum in the AMA and NAMA.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e2533">Amplitude of the cycle of daily water vapour at <bold>(a, c)</bold> 80 <inline-formula><mml:math id="M147" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> and <bold>(b, d)</bold> 100 <inline-formula><mml:math id="M148" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> averaged over <bold>(a, b)</bold> the Asian Monsoon Anticyclone, AMA (20–40<inline-formula><mml:math id="M149" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> N, 40–140<inline-formula><mml:math id="M150" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> E), and <bold>(c, d)</bold> the North American Monsoon Anticyclone, NAMA  (10–30<inline-formula><mml:math id="M151" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> N, 220–300<inline-formula><mml:math id="M152" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> E), for the period 2007–2016. Coloured numbers are the mean water vapour during April in each experiment, which is used as the reference level. The regions in which averages are computed correspond to the maxima of water vapour found in the boreal summer climatology of the water vapour observed by Aura MLS v4.2.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f04.png"/>

          </fig>

      <p id="d1e2611">Figure <xref ref-type="fig" rid="Ch1.F4"/> shows that over both the AMA and NAMA
regions and at both 100 and 80 <inline-formula><mml:math id="M153" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, all experiments represent the
observed increase in water vapour during boreal summer. The peak water vapour shows a 1–2-month delay at 80 <inline-formula><mml:math id="M154" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> with respect to 100 <inline-formula><mml:math id="M155" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>. Figure <xref ref-type="fig" rid="Ch1.F4"/>b reveals that CIRRUS,
TRAJ and CHEM better represent the amplitude of the seasonal cycle of water
vapour at 100 <inline-formula><mml:math id="M156" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> in the AMA, according to MLS observations, although
they underestimate the absolute value in summer (see their average for April
and also Fig. <xref ref-type="fig" rid="Ch1.F1"/>). At 80 <inline-formula><mml:math id="M157" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, however,
the simulations including small-scale mixing are in better agreement with MLS.</p>
      <p id="d1e2662">The CIRRUS experiment slightly overestimates the peak-to-peak amplitude at
100 <inline-formula><mml:math id="M158" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, which is about 0.3 <inline-formula><mml:math id="M159" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> higher than in MLS
observations (Fig. <xref ref-type="fig" rid="Ch1.F4"/>b). CIRRUS also shows a higher
offset than TRAJ and CHEM, related to a higher annual cycle
minimum. Consequently, CIRRUS shows a water vapour distribution that is closer
to the observations not only during the monsoon season, as shown in
Fig. <xref ref-type="fig" rid="Ch1.F1"/>, but throughout the year, compared to
TRAJ and CHEM.</p>
      <p id="d1e2685">Figure <xref ref-type="fig" rid="Ch1.F4"/>b shows a very steep water vapour increase
in the AMA between June and August for SSMIX and VMIX, resulting in an
overestimation of the amplitude of the annual cycle at 100 <inline-formula><mml:math id="M160" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M162" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> compared to MLS and <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M164" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> compared to
TRAJ). Furthermore, at this pressure level the differences between VMIX and
SSMIX are slightly larger during the monsoon season, which is linked to the
enhanced tropospheric mixing in VMIX and might be related to the impact of
enhanced convective updrafts over the monsoon region during summer. Also,
Fig. <xref ref-type="fig" rid="Ch1.F4"/>b shows that the water vapour decrease,
observed from September onward, is faster in SSMIX and VMIX than in MLS observations. Thus, the good agreement between SSMIX and VMIX in the AMA
during the monsoon season (Fig. <xref ref-type="fig" rid="Ch1.F1"/>e and f) can
be attributed, on the one hand, to an increase in the minimum value over the
annual cycle (as is evident from the April averages in
Fig. <xref ref-type="fig" rid="Ch1.F4"/>b), which nevertheless remains underestimated, and on the other hand to an overestimation of the water vapour increase during
the monsoon in July and August.</p>
      <?pagebreak page9595?><p id="d1e2741">At 80 <inline-formula><mml:math id="M165" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, on the other hand, the annual cycle is better reproduced by
SSMIX and VMIX than by the pure LTF models
(Fig. <xref ref-type="fig" rid="Ch1.F4"/>a). Thus, while SSMIX and VMIX show a water
vapour increase and a peak amplitude very close to the observations, the
“no-mixing” experiments clearly underestimate the amplitude of the annual
cycle and typically exhibit a slower water vapour increase in summer and a
slight delay (1–2 weeks) of the annual maximum.</p>
      <p id="d1e2754">Finally, since the STANDARD experiment includes the same process
parameterizations as SSMIX, it is not surprising that it also shows an
overestimation of the water vapour increase in the AMA at 100 <inline-formula><mml:math id="M166" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>,
with a peak amplitude that is about 0.5 <inline-formula><mml:math id="M167" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> larger than in MLS
(Fig. <xref ref-type="fig" rid="Ch1.F4"/>b). As for SSMIX and VMIX, STANDARD also
results in a faster water vapour decrease from September onward at this
level. However, despite very similar behaviour to SSMIX/VMIX at 80 <inline-formula><mml:math id="M168" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, STANDARD exhibits a weaker water vapour increase than SSMIX at
100 <inline-formula><mml:math id="M169" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e2791">Figure <xref ref-type="fig" rid="Ch1.F4"/>b shows that STANDARD depicts the largest offset with respect to MLS. Nevertheless, the difference in water vapour
between STANDARD and MLS increases at 100 <inline-formula><mml:math id="M170" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> during the mature phase
of the AMA. This can be most likely attributed to the excessive amount of
water vapour created by the small-scale mixing at the beginning of the monsoon
season, as is the case for SSMIX and VMIX as well.</p>
      <p id="d1e2804">In the NAMA region, the annual cycle in water vapour is more consistent
between the different experiments as compared to the AMA, but differences to
MLS are larger (Fig. <xref ref-type="fig" rid="Ch1.F4"/>c and d). The increase in simulated water vapour occurs from May to September and is weaker than in MLS
observations. This leads to a peak-to-peak amplitude underestimated by 0.2 to
0.4 <inline-formula><mml:math id="M171" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> depending on the experiment and to a delay of about 1 month to 6 weeks in the annual cycle maximum. Also, the impacts of the
non-instantaneous removal of ice and of small-scale mixing in the NAMA region
are<?pagebreak page9596?> quite uniform throughout the year and do not exhibit intensification
during the monsoon season. This suggests a minor impact of small-scale mixing
processes in the NAMA compared to the AMA. Although both SSMIX and VMIX show a
wetter NAMA than CIRRUS (Fig. <xref ref-type="fig" rid="Ch1.F1"/>), according to
Fig. <xref ref-type="fig" rid="Ch1.F4"/>d this is due to a uniform impact of small-scale mixing processes throughout the year rather than a peak during the
monsoon season. As previously mentioned, small-scale mixing depends on
deformations of the large-scale flow. The large-scale circulation of the NAMA is less confined than the AMA <xref ref-type="bibr" rid="bib1.bibx17" id="paren.105"/>, which could
render this region more sensitive to overshooting convection (not included in
our experiments) in comparison with the AMA. Indeed, the larger and consistent differences of all model experiments to MLS also point to a significant
role of convection, the common process neglected in all simulations, for moistening the NAMA. Furthermore, the STANDARD experiment shows a similar
behaviour during the monsoon season, showing that the differences in the initialization scheme have a very limited influence on the annual cycle of the
water vapour over the NAMA.</p>
      <p id="d1e2825">The annual cycle at 80 <inline-formula><mml:math id="M172" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F4"/>c) shows the lower water vapour increases, peak-to-peak amplitudes and a delayed maximum
for all experiments compared to the observations. At this level, the
experiments which best match the observed annual cycle are STANDARD, SSMIX,
VMIX and CIRRUS, i.e. those exhibiting a higher water vapour content at
100 <inline-formula><mml:math id="M173" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F1"/>). Note that even for
those experiments significant differences to MLS remain (about
0.5 <inline-formula><mml:math id="M174" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula>).</p>
</sec>
<sec id="Ch1.S3.SS3.SSS2">
  <label>3.3.2</label><title>Sub-seasonal variability</title>
      <p id="d1e2864">In order to assess the representation of water vapour variability beyond the
seasonal cycle in the AMA, Fig. <xref ref-type="fig" rid="Ch1.F5"/>a–f depict deseasonalized daily anomalies of water vapour during 2007–2016 for each
experiment and MLS observations together with the respective correlations. In
order to evaluate the experiments for the entire monsoon season (from May to
September, MJJAS) and the mature phase of the monsoon season
(June–July–August, JJA), these correlations are computed for both periods. All LTF experiments exhibit statistically significant correlations, and the
correlations tend to increase with the complexity of the experiment (i.e. the
number of processes included). Thus, the simpler configurations TRAJ and CHEM
have the lowest correlations of 0.51 (JJA) and 0.62 (MJJAS) (<inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.025</mml:mn></mml:mrow></mml:math></inline-formula>). Note
that these values are consistent with those obtained by
<xref ref-type="bibr" rid="bib1.bibx77" id="text.106"/> in similar experiments using ERA-Interim (their Fig. 6). Although lowest among all the experiments presented here, the still significant correlations between TRAJ (CHEM) and MLS support the idea that
large-scale cold-point temperature variability is the main factor controlling water vapour variability in the Asian Monsoon UTLS, as also argued by <xref ref-type="bibr" rid="bib1.bibx56" id="text.107"/> and <xref ref-type="bibr" rid="bib1.bibx77" id="text.108"/>. Furthermore, the small difference between correlations in TRAJ and CHEM experiments reveals that methane
oxidation is irrelevant to water vapour variability in the AMA.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e2892">Boreal summer deseasonalized anomalies of water vapour in <bold>(a–f)</bold> the Asian Monsoon Anticyclone, AMA, and <bold>(g–l)</bold> the North American Monsoon Anticyclone, NAMA, for (top–bottom) TRAJ, CHEM, CIRRUS, VMIX, SSMIX, and STANDARD in comparison with MLS (blue line). Correlation values between each experiment and MLS  are calculated from May to September (<inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>MJJAS</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) and from June to August (<inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:msub><mml:mi>r</mml:mi><mml:mtext>JJA</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>).</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f05.png"/>

          </fig>

      <p id="d1e2929">Including the simple parameterization of in situ ice formation and evaporation
(CIRRUS) slightly improves the correlation during both JJA and MJJAS. This
improvement is even higher when small-scale mixing processes are also
included. Thus, among all LTF experiments the highest correlations are
obtained for SSMIX (<inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.64</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">0.69</mml:mn></mml:mrow></mml:math></inline-formula> for JJA/MJJAS, <inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.025</mml:mn></mml:mrow></mml:math></inline-formula>) and VMIX
(<inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.62</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">0.66</mml:mn></mml:mrow></mml:math></inline-formula> for JJA/MJJAS, <inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.025</mml:mn></mml:mrow></mml:math></inline-formula>). This result manifests the importance
of mixing for the simulation of a realistic water vapour variability in the
AMA, despite the overestimation of the water vapour increase at the beginning
of the monsoon season at 100 <inline-formula><mml:math id="M182" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> found in
Fig. <xref ref-type="fig" rid="Ch1.F4"/>a and b. Comparing SSMIX with VMIX shows that
the enhanced tropospheric mixing, which has only a mild impact on the water
vapour distribution (Fig. <xref ref-type="fig" rid="Ch1.F1"/>f and k), does not
improve the simulation of water vapour variability.  Overall, the experiments
including mixing do a significantly better job in simulating the sub-seasonal
variability (correlations of about 0.6) than the pure LTF experiments (TRAJ,
CHEM and CIRRUS, correlations with MLS slightly above 0.5). Hence, including
mixing processes improves the simulation of water vapour variability in the
AMA on sub-seasonal timescales.  Finally, Fig. <xref ref-type="fig" rid="Ch1.F5"/>f shows
evidence that, for both periods, the STANDARD simulation correlates best with
MLS, reaching values of 0.76 and 0.74 (<inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.025</mml:mn></mml:mrow></mml:math></inline-formula>) for JJA and MJJAS, and
significantly improves the intra-seasonal variability in the AMA.</p>
      <p id="d1e3016">In the NAMA, simulated deseasonalized daily anomalies of water vapour
correlate relatively well with MLS for both periods, reaching even higher
correlations than in the AMA (Fig. <xref ref-type="fig" rid="Ch1.F5"/>g–l), despite the
poor representation of the water vapour climatology in this region.  The
STANDARD simulation shows the highest correlation with MLS (<inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.83</mml:mn></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.025</mml:mn></mml:mrow></mml:math></inline-formula> in JJA), followed by the LTF experiments that include small-scale mixing (SSMIX, 0.77 and VMIX 0.78 in JJA). The lowest correlation is achieved
by TRAJ (<inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.73</mml:mn></mml:mrow></mml:math></inline-formula> in JJA), which is still very similar to the highest correlation achieved in the AMA region. Again, the TRAJ experiment already
shows high correlation with MLS, indicating that temperature is the main
control factor for intra-seasonal variability also in the NAMA. The reason why
correlations in the NAMA are higher than in the AMA is likely related to the
fact that processes other than large-scale temperature variability play a larger role when the anticyclonic circulation and related confinement are
strong enough, as in the AMA.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Discussion</title>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Convective moistening</title>
      <p id="d1e3074">Another important process for the UTLS water vapour budget is ice and moisture
transport by convection
<xref ref-type="bibr" rid="bib1.bibx4 bib1.bibx7" id="paren.109"/>. Although some of<?pagebreak page9597?> the
experiments presented here include processes whose particular
parameterizations may contribute to convective moistening (e.g. small-scale mixing), a direct simulation of convection is not present in these
simulations.</p>
      <?pagebreak page9598?><p id="d1e3080">To further investigate the additional effects of convection on the monsoon
water vapour budget, we performed a modified TRAJ experiment, hereafter called
CONV, in which this process is taken into account, following an approach
similar to that of <xref ref-type="bibr" rid="bib1.bibx70" id="text.110"/>. In CONV we use the
trajectories of TRAJ to compute the LMR of the air parcels. At every time step a check is performed for whether an air parcel is located inside a cloud, i.e. at a pressure level below that of the cloud top. If this is the case, the air
parcel's water vapour is set to the saturation mixing ratio (100 <inline-formula><mml:math id="M187" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula>
relative humidity), according to the temperature that the ERA-Interim
reanalysis attributes to the location of the air parcel. This process
corresponds to hydration if the air parcel is initially subsaturated and
dehydration if it is supersaturated <xref ref-type="bibr" rid="bib1.bibx70" id="paren.111"><named-content content-type="pre">see</named-content></xref>. We
use ISCCP B1 (GridSat-B1) Infrared Channel Brightness Temperature combined
with ERA-Interim data to determine cloud top heights <xref ref-type="bibr" rid="bib1.bibx25" id="paren.112"/>, following the methodology of <xref ref-type="bibr" rid="bib1.bibx69" id="text.113"/>. Their approach is
similar to the one employed by <xref ref-type="bibr" rid="bib1.bibx70" id="text.114"/> and assumes that
the temperature at cloud top is equal to the temperature of the environment
estimated from the reanalysis. The resulting altitude is shifted upward by
1 <inline-formula><mml:math id="M188" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> to correct for biases in infrared cloud top temperature
<xref ref-type="bibr" rid="bib1.bibx37" id="paren.115"/>. There are a few differences, however, between
the two methods: first, contrary to <xref ref-type="bibr" rid="bib1.bibx70" id="text.116"/>,
<xref ref-type="bibr" rid="bib1.bibx69" id="text.117"/> do not distinguish convective cores from in
situ formed cirrus clouds and include both for cloud top determination. The impact of this difference should be small as long as the cirrus clouds are
sufficiently thin. Second, in the case of brightness temperatures lower than
the local tropopause temperature, we assume that convective parcels rise
adiabatically from 40 <inline-formula><mml:math id="M189" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> below the tropopause, whereas
<xref ref-type="bibr" rid="bib1.bibx70" id="text.118"/> take a mixture of tropopause (70 <inline-formula><mml:math id="M190" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula>) and
environmental (30 <inline-formula><mml:math id="M191" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula>) air. Therefore, our estimated cloud top altitudes may be low biased compared to theirs. Finally, note that the ISCCP
B1 has slightly lower horizontal resolution (<inline-formula><mml:math id="M192" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M193" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula> vs.
4 <inline-formula><mml:math id="M194" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">km</mml:mi></mml:mrow></mml:math></inline-formula>) than the dataset of <xref ref-type="bibr" rid="bib1.bibx70" id="text.119"/> but similar
temporal resolution (3-hourly).  Figure <xref ref-type="fig" rid="Ch1.F6"/> shows the water vapour
distributions at 100 <inline-formula><mml:math id="M195" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> of TRAJ (Fig. <xref ref-type="fig" rid="Ch1.F6"/>a), CONV
(Fig. <xref ref-type="fig" rid="Ch1.F6"/>b) and the differences between both of them. The two
experiments result in a very similar water vapour distribution, with a slight
moistening effect caused by convection, mainly at mid and high
latitudes. These results indicate that even when a convective event occurs,
the water vapour is set by temperatures experienced by the air parcels after
convection. This result is in agreement with <xref ref-type="bibr" rid="bib1.bibx52 bib1.bibx56" id="text.120"/> but not in line with <xref ref-type="bibr" rid="bib1.bibx70" id="text.121"/>. However, it should be kept in mind that
<xref ref-type="bibr" rid="bib1.bibx70" id="text.122"/> focused on the analysis of a single 7 <inline-formula><mml:math id="M196" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">d</mml:mi></mml:mrow></mml:math></inline-formula>
convective event during summer 2007, whereas we consider the entire summer
(June–August) for 2005–2009. Thus, while their main conclusion is that
infrequent deep convection reaching above 380 <inline-formula><mml:math id="M197" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> causes a strong
moistening of the LS, our results show that the climatological impact of these
events is likely very weak.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e3226">Boreal summer distribution of water vapour at 100 <inline-formula><mml:math id="M198" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> in 2008 for the <bold>(a)</bold> TRAJ and <bold>(b)</bold> CONV experiments and <bold>(c)</bold> their differences.</p></caption>
          <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f06.png"/>

        </fig>

      <p id="d1e3253">We have also considered only the 7 <inline-formula><mml:math id="M199" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">d</mml:mi></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx70" id="text.123"/> to
check whether we were able to reproduce the same results with TRAJ and CONV as their simulations without and with convection, respectively. However, in our case TRAJ produces a maximum of water vapour in the AMA that is not observed
in their non-convective experiment. This suggests that there are additional features, further than the differences mentioned before, that make the
comparison between the experiments in <xref ref-type="bibr" rid="bib1.bibx70" id="text.124"/> and ours
difficult. Another limitation of our approach in CONV is that we have not
taken into account the role of convective ice. According to
<xref ref-type="bibr" rid="bib1.bibx73" id="text.125"/>, the main impact of convection on the LS water vapour occurs through the injection of ice. The latter assertion, however, is
contrary to the conclusions of <xref ref-type="bibr" rid="bib1.bibx70" id="text.126"/>.  These
differences between the different studies highlight the large existing uncertainty about the role of convection for LS water vapour. A deeper
analysis of this issue should be considered in future studies.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Sensitivity of water vapour to the LTF set-up</title>
      <p id="d1e3284">In the LTF experiments previously described, we have used the same longitude–latitude grid to release new air parcels at the same initial potential temperature of 360 <inline-formula><mml:math id="M200" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>. This configuration, which has been
chosen following the procedure of <xref ref-type="bibr" rid="bib1.bibx59" id="text.127"/>, might have
an effect on our results. In fact, <xref ref-type="bibr" rid="bib1.bibx61" id="text.128"/> and <xref ref-type="bibr" rid="bib1.bibx73" id="text.129"/> use 370 <inline-formula><mml:math id="M201" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> as the initial potential temperature level
for air parcels released in the Asian Monsoon region. They argue that because
the LZRH is higher over the AMA than in other regions, many air parcels
released at 360 <inline-formula><mml:math id="M202" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> may descend and are removed from the
simulation. Figure <xref ref-type="fig" rid="Ch1.F7"/>a shows the normalized distribution of
air parcels in TRAJ at 100 <inline-formula><mml:math id="M203" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> centered in the AMA for JJA in 2007. As
we could expect from <xref ref-type="bibr" rid="bib1.bibx61" id="text.130"/> and <xref ref-type="bibr" rid="bib1.bibx73" id="text.131"/>, the AMA is characterized by a lower density of air parcels. Because a low number of air
parcels could condition the robustness of the results, this raises the
question of the possible impact of the number of air parcels in the AMA on the
water vapour distribution in this region. To test this potential sensitivity
to the number of air parcels, we have performed two additional TRAJ
experiments in which either the number of air parcels newly released has been
increased (TRAJ-denser) or the initial potential temperature
(TRAJ-370 <inline-formula><mml:math id="M204" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>) has been changed. In TRAJ-denser the number of air
parcels is increased by releasing them on a higher-resolution grid (2.5<inline-formula><mml:math id="M205" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> longitude <inline-formula><mml:math id="M206" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 1<inline-formula><mml:math id="M207" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitude). By contrast, in TRAJ-370 <inline-formula><mml:math id="M208" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> the initialization grid maintains the same resolution as in
TRAJ, but air parcels are launched at the <inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">370</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M210" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> surface instead of at 360 <inline-formula><mml:math id="M211" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F7" specific-use="star"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e3411"><bold>(a)</bold> Normalized density of air parcels in the AMA region during JJA in 2007 for the TRAJ experiment. Distributions of the relative number of air parcels with respect to TRAJ in <bold>(b)</bold> TRAJ-denser and <bold>(c)</bold> TRAJ-370 <inline-formula><mml:math id="M212" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>. Boreal water vapour distributions of <bold>(d)</bold> TRAJ,  <bold>(e)</bold> TRAJ-denser and  <bold>(d)</bold> TRAJ-370 K in 2007.</p></caption>
          <?xmltex \igopts{width=338.587795pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f07.png"/>

        </fig>

      <p id="d1e3446">Figure <xref ref-type="fig" rid="Ch1.F7"/>b and c show the relative number of air parcels in the AMA at 100 <inline-formula><mml:math id="M213" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> of TRAJ-denser and TRAJ-370 <inline-formula><mml:math id="M214" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> with
respect to TRAJ. In addition, Fig. <xref ref-type="fig" rid="Ch1.F7"/>d–f show the water vapour distributions of TRAJ, TRAJ-denser and TRAJ-370 <inline-formula><mml:math id="M215" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> for the same
season and year. In both experiments, the<?pagebreak page9599?> density of air parcels has increased
notably with respect to TRAJ. There are 4 times more air parcels in TRAJ-denser (Fig. <xref ref-type="fig" rid="Ch1.F7"/>b) and 2 times more in TRAJ-370 <inline-formula><mml:math id="M216" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>
(Fig. <xref ref-type="fig" rid="Ch1.F7"/>c) than in TRAJ. As in TRAJ-denser more air parcels
are released inside the AMA, a larger number of them reach the 100 <inline-formula><mml:math id="M217" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>
level. However, this larger number of air parcels is not accompanied by an
enhancement of water vapour (Fig. <xref ref-type="fig" rid="Ch1.F7"/>e). Therefore, we
conclude that increasing the resolution of the initialization grid used in our
LTF experiments does not have an impact on our results, which means that the
resolution and particle number of the TRAJ experiment are high enough to
adequately capture the spatial variability of the temperature field and its
impact on water vapour. By contrast, TRAJ-370 <inline-formula><mml:math id="M218" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> exhibits a moister water vapour distribution in the AMA than the original TRAJ experiment
(Fig. <xref ref-type="fig" rid="Ch1.F7"/>f). This might be explained by the fact that the
AMA shows a stronger anticyclonic circulation at 370 <inline-formula><mml:math id="M219" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> than at
360 <inline-formula><mml:math id="M220" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx1" id="paren.132"/>, giving rise to the uplift of more
air parcels through the inner core of the AMA. The stronger confinement of
this region can allow a greater number of air parcels to avoid the coldest
regions, which are located at the south-eastern flank of the AMA. Thus, when the air parcels spawn to other regions at the 100 <inline-formula><mml:math id="M221" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> level due to the weakening of the anticyclone circulation, they transport a larger water vapour
content than air parcels reaching the same pressure level in TRAJ. This
widening of the vertical transport conduit of air parcels when being uplifted
in the Asian Monsoon Anticyclone is consistent with the main transport pathway proposed by <xref ref-type="bibr" rid="bib1.bibx1" id="text.133"/>.</p>
      <p id="d1e3542">These results show that our LTF experiments have a sufficient number of air parcels to be statistically significant. Furthermore, they point out that
the selection of a higher initial potential temperature in the AMA has an
impact on water vapour distributions, likely related to the larger exposure of
the chosen potential temperature level to stronger confinement in the
AMA. Thus, we conclude that the selection of the initial potential temperature
should not only take into account the level of zero radiative heating, but
also the strength and confinement of the AMA.</p>
      <p id="d1e3545">These sensitivity tests of the domain-filling technique to a different selection of arbitrarily chosen parameters do not cover possible impacts of the LTF scheme itself in our water vapour results. To study this we compare a LTF
experiment, SSMIX, with a non-LTF experiment, STANDARD. Despite the similar set of parameterizations included, the STANDARD and SSMIX experiments
significantly differ, and STANDARD agrees better with MLS regarding seasonal and intra-seasonal variability in the AMA and NAMA. The remaining discrepancies might be due to (i) the initial water vapour content of the air parcels and (ii) the filtering of air parcels below 250 <inline-formula><mml:math id="M222" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> and above
1800 <inline-formula><mml:math id="M223" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>, in particular the absence of a troposphere.</p>
      <p id="d1e3564">To test point (i), we performed an additional experiment configured as SSMIX but doubling the initial water vapour content of air parcels from 50 to
100 <inline-formula><mml:math id="M224" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula>. Figure <xref ref-type="fig" rid="App1.Ch1.S1.F12"/> in the Appendix shows that the
distribution at 100 <inline-formula><mml:math id="M225" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> is not affected by this change in the initial condition. Note however that this does not suggest that the water vapour is
entirely insensitive to the lower boundary condition, as explained below.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e3587"><bold>(a–d)</bold> Climatology of water vapour at 360 <inline-formula><mml:math id="M226" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> from <bold>(a)</bold> Aura MLS v4.2 observations, <bold>(b)</bold> STANDARD, <bold>(c)</bold> SSMIX and <bold>(d)</bold> SSMIX initialized with 100 <inline-formula><mml:math id="M227" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula>. <bold>(e–h)</bold> Correlation between the water vapour time series averaged in 60–100<inline-formula><mml:math id="M228" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> E, 20–30<inline-formula><mml:math id="M229" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> N at 360 <inline-formula><mml:math id="M230" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> and the time series of water vapour at 100 <inline-formula><mml:math id="M231" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> at each grid point during boreal summer for <bold>(e)</bold> Aura MLS v4.2 <bold>(f)</bold> STANDARD, <bold>(g)</bold> SSMIX and <bold>(h)</bold> SSMIX initialized with 100 <inline-formula><mml:math id="M232" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula>.</p></caption>
          <?xmltex \igopts{width=335.74252pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f08.png"/>

        </fig>

      <p id="d1e3687">In order to further investigate this result, Fig. <xref ref-type="fig" rid="Ch1.F8"/> depicts the
360 <inline-formula><mml:math id="M233" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> water vapour maps (corresponding to the level of initialization
of SSMIX) for MLS observations, STANDARD and the two SSMIX experiments. Note
that the water vapour mixing ratio in the SSMIX is significantly lower than
the initialization value. This is due to the presence of older air parcels
which have been released at earlier time steps, have undergone dehydration and have been transported into the 360 <inline-formula><mml:math id="M234" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> layer from above. This stagnation and
return of old air parcels is allowed as the filtering occurs at
250 <inline-formula><mml:math id="M235" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>, which is below the initialization level. Therefore, we
conclude that the initialization value in LTF experiments cannot be considered
a lower boundary condition for LTF simulations in the Asian Monsoon.</p>
      <p id="d1e3717">It turns out that the water vapour variability at 100 <inline-formula><mml:math id="M236" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> is, indeed,
sensitive to this lower boundary condition. This is indicated by the high
correlations between the water vapour at 360 <inline-formula><mml:math id="M237" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> in the AMA region and
local <inline-formula><mml:math id="M238" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> at 100 <inline-formula><mml:math id="M239" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F8"/>e–h), which peak over the
Asian Monsoon. The significantly different lower boundary conditions shown in
(Fig. <xref ref-type="fig" rid="Ch1.F8"/>a–d) thus likely cause parts of the observed differences
between STANDARD and SSMIX at 100 <inline-formula><mml:math id="M240" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>. In the standard LTF approach,
this boundary condition is not directly set because of the mixture of old and
young air parcels making up the air masses at 360 <inline-formula><mml:math id="M241" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{9}?><?xmltex \def\figurename{Figure}?><label>Figure 9</label><caption><p id="d1e3780"><bold>(a)</bold> Distribution of the relative number of air parcels simulated in STANDARD with respect to SSMIX during JJA for 2007–2016. <bold>(b)</bold> Normalized PDF of the water vapour of air parcels encountered during JJA (2007–2016) over the Asian Monsoon region (20–40<inline-formula><mml:math id="M242" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> N, 40–140<inline-formula><mml:math id="M243" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> E) for SSMIX and STANDARD.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f09.png"/>

        </fig>

      <p id="d1e3814">While this issue may be interpreted as a too dry lower boundary condition, it
is in the end related to missing transport pathways in the lower part of the
simulated domain.  This interpretation is supported by
Fig. <xref ref-type="fig" rid="Ch1.F9"/>a, which shows the relative percentage of air parcels simulated in STANDARD with respect to SSMIX. STANDARD shows a higher number of
air parcels than SSMIX throughout the domain, and in particular in the AMA and
the Southern Hemisphere subtropics (Fig. <xref ref-type="fig" rid="Ch1.F9"/>a). Not only does STANDARD simulate more air parcels in the AMA, but these parcels are also wetter, as shown
in the probability density function (PDF) of the water vapour content of the air parcels (Fig. <xref ref-type="fig" rid="Ch1.F9"/>b). These differences suggest a lack of vertical transport of moist tropospheric air parcels from lower levels
in the LTF initialization (where these air parcels are removed). Besides
vertical transport, it is likely that inhibited horizontal entrainment also
plays a role, since at the 360 <inline-formula><mml:math id="M244" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> initialization level the inner
anticyclone core is, to some degree, isolated from the surrounding areas, as
shown in <xref ref-type="bibr" rid="bib1.bibx14" id="text.134"/>.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusion</title>
      <?pagebreak page9601?><p id="d1e3844">In this study, we compared numerical Lagrangian transport simulations based on
the forward domain-filling technique developed by <xref ref-type="bibr" rid="bib1.bibx59" id="text.135"/> with the CLaMS model
<xref ref-type="bibr" rid="bib1.bibx36 bib1.bibx35" id="paren.136"/> in order to assess the impact of
methane oxidation, ice microphysics, small-scale mixing and enhanced
tropospheric mixing on the water vapour distribution in the lower stratosphere
during boreal summer. A particular focus was laid on the Asian (AMA) and North
American (NAMA) Monsoon Anticyclones in the UTLS.</p>
      <p id="d1e3853">In agreement with previous work <xref ref-type="bibr" rid="bib1.bibx20 bib1.bibx59" id="paren.137"><named-content content-type="pre">e.g.</named-content></xref>, we find that simple last-dehydration-point LTF
modelling based on large-scale reanalysis temperature and wind fields can qualitatively reproduce the water vapour signal in the AMA and its
variability but with simulated mixing ratios dry-biased. Furthermore, while our modelling set-up reproduces well the water vapour signal in the AMA, the location and amplitude of the NAMA maximum are less well reproduced.</p>
      <p id="d1e3861">While the effect of methane oxidation is small, a simplified representation of
ice microphysics significantly moistens the LS. The magnitude of the water
vapour enhancement largely depends on microphysical assumptions. A new finding
of our study is that small-scale mixing processes, as parameterized in CLaMS
depending on shear in the large-scale flow, has a strong impact on water
vapour in the AMA region. A sensitivity simulation evaluating convective
hydration suggests that its pattern is different from that of small-scale
mixing and not particularly strong in the AMA, which tends to confirm the
distinct signature of mixing. Interestingly, we find that the impact of
changing microphysical assumptions also varies depending on the presence of
mixing. This suggests that mixing is an important process for understanding boreal summer water vapour. For a more complete picture of the UTLS boreal summer water vapour budget, future research should focus on investigating the impact
of mixing on water vapour isotopes and high-altitude cloud cover.</p><?xmltex \hack{\clearpage}?>
</sec>

      
      </body>
    <back><app-group>

<?pagebreak page9602?><app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><title>Effect of mixing on bypassing cold traps</title>
      <p id="d1e3876">This hypothetical situation is illustrated in Fig. <xref ref-type="fig" rid="App1.Ch1.S1.F10"/>. Given
two air parcels, “A” and “B”, at different altitudes but close enough,
they mix together into “C”. In case C is supersaturated after mixing, the
microphysics of ice turns it into saturation, forming ice particles with the
excess water vapour. However, this saturation value would be higher than that corresponding to the minimum temperature in the vertical profile considered,
<inline-formula><mml:math id="M245" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula>​​​​​​​. Therefore, the water vapour of C would not be set by <inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula>, but by the
temperature at its altitude. In case <inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula> represents the temperature of the
CPT, then water vapour has been transported to higher altitudes, avoiding the CPT and giving rise to an increase in water vapour over most regions, but especially where the mixing is stronger.</p><?xmltex \hack{\newpage}?><?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F10"><?xmltex \currentcnt{A1}?><?xmltex \def\figurename{Figure}?><label>Figure A1</label><caption><p id="d1e3916">Hypothetical scheme in which the mixing process avoids a “cold trap”. Air parcels A and B mix into C. Due to the temperature vertical profile, temperature in C is larger than the temperature registered below, <inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula>. Therefore, in case C is saturated according to its temperature, the water vapour content would be larger than if an air parcel would be transported to the same altitude encountering <inline-formula><mml:math id="M249" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mo>min⁡</mml:mo></mml:msub></mml:mrow></mml:math></inline-formula>.</p></caption>
        <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f10.png"/>

      </fig>

<?xmltex \hack{\clearpage}?><?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F11"><?xmltex \currentcnt{A2}?><?xmltex \def\figurename{Figure}?><label>Figure A2</label><caption><p id="d1e3951">Differences in the distribution of water vapour at 100 <inline-formula><mml:math id="M250" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> between VMIX (experiment with ice microphysics) and VMIXnocirrus (experiment without ice microphysics) during JJA for 2005–2008. Red colours mean VMIX performs larger water vapour than VMIXnocirrus.</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=312.980315pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f11.png"/>

      </fig>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.S1.F12"><?xmltex \currentcnt{A3}?><?xmltex \def\figurename{Figure}?><label>Figure A3</label><caption><p id="d1e3972">Distribution of water vapour at 100 <inline-formula><mml:math id="M251" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula> of SSMIX initialized with <bold>(a)</bold> 50 <inline-formula><mml:math id="M252" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> and <bold>(b)</bold> 100 <inline-formula><mml:math id="M253" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppmv</mml:mi></mml:mrow></mml:math></inline-formula> during boreal summer for 2007–2016.</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/21/9585/2021/acp-21-9585-2021-f12.png"/>

      </fig>

<?xmltex \hack{\clearpage}?>
</app>
  </app-group><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e4019">Data used for experiments are available upon request from authors Nuria Pilar Plaza (npplamar@upo.es) and Felix Ploeger (fploeger@fz.julich.de). MLS <inline-formula><mml:math id="M254" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> version 4.2 data can be obtained from the MLS website <uri>https://mls.jpl.nasa.gov/data/v4-2_data_quality_document.pdf</uri> <xref ref-type="bibr" rid="bib1.bibx33" id="paren.138"/>.</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e4044">NPP, AP and FP designed the experiments. NPP and AP performed the experiments with CLaMS. NPP performed the data analysis. NPP, CPO, AP and FP contributed to the discussion of results. NPP and CPO wrote the text. CPO, AP and FP made the final review.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e4050">The authors declare that they have no conflict of interest.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e4056">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e4062">We would like to thank Bernard Legras for performing an experiment with TRACZILLA and sharing with us his work. We thank the Institute of Climate from the Research Center of Jülich and, especially, Martin Riese, for
their scientific, technical and financial support.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e4067">This research has been supported by the Spanish Ministerio de Economía y Competitividad (grant no. CGL2016-78562-P).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e4073">This paper was edited by Jianzhong Ma and reviewed by two anonymous referees.</p>
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    <!--<article-title-html>Processes influencing lower stratospheric water vapour in monsoon anticyclones: insights from Lagrangian modelling</article-title-html>
<abstract-html><p>We investigate the influence of different chemical and physical processes on the water vapour distribution in the lower stratosphere (LS), in particular in
the Asian and North American monsoon anticyclones (AMA and NAMA, respectively). Specifically, we use the chemistry transport model CLaMS to
analyse the effects of large-scale temperatures, methane oxidation, ice microphysics, and small-scale atmospheric mixing processes in different model
experiments. All these processes hydrate the LS and, particularly, the
AMA. While ice microphysics has the largest global moistening impact, it is
small-scale mixing which dominates the specific signature in the AMA in the
model experiments. In particular, the small-scale mixing parameterization
strongly contributes to the water vapour transport to this region and improves
the simulation of the intra-seasonal variability, resulting in a better
agreement with the Aura Microwave Limb Sounder (MLS) observations. Although none of our experiments reproduces the spatial pattern of the NAMA as seen in MLS observations, they all exhibit a realistic annual cycle and intra-seasonal variability, which are mainly
controlled by large-scale temperatures. We further analyse the sensitivity of
these results to the domain-filling trajectory set-up, here-called Lagrangian
trajectory filling (LTF). Compared with MLS observations and with a multiyear reference simulation using the full-blown chemistry transport model version of
CLaMS, we find that the LTF schemes result in a drier global LS and in a
weaker water vapour signal over the monsoon regions, which is likely related
to the specification of the lower boundary condition. Overall, our results
emphasize the importance of subgrid-scale mixing and multiple transport
pathways from the troposphere in representing water vapour in the AMA.</p></abstract-html>
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