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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-20-7753-2020</article-id><title-group><article-title>Constraining remote oxidation capacity with ATom observations</article-title><alt-title>Constraining remote oxidation capacity</alt-title>
      </title-group><?xmltex \runningtitle{Constraining remote oxidation capacity}?><?xmltex \runningauthor{K. R. Travis et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff23">
          <name><surname>Travis</surname><given-names>Katherine R.</given-names></name>
          <email>katherine.travis@nasa.gov</email>
        <ext-link>https://orcid.org/0000-0003-1628-0353</ext-link></contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2">
          <name><surname>Heald</surname><given-names>Colette L.</given-names></name>
          <email>heald@mit.edu</email>
        <ext-link>https://orcid.org/0000-0003-2894-5738</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Allen</surname><given-names>Hannah M.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Apel</surname><given-names>Eric C.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Arnold</surname><given-names>Stephen R.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Blake</surname><given-names>Donald R.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff7">
          <name><surname>Brune</surname><given-names>William H.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-1609-4051</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff8">
          <name><surname>Chen</surname><given-names>Xin</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-0952-0008</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff9">
          <name><surname>Commane</surname><given-names>Róisín</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-1373-1550</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff10">
          <name><surname>Crounse</surname><given-names>John D.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5443-729X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11">
          <name><surname>Daube</surname><given-names>Bruce C.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff12">
          <name><surname>Diskin</surname><given-names>Glenn S.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3617-0269</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff13">
          <name><surname>Elkins</surname><given-names>James W.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff14 aff15">
          <name><surname>Evans</surname><given-names>Mathew J.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-4775-032X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Hall</surname><given-names>Samuel R.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff13 aff16">
          <name><surname>Hintsa</surname><given-names>Eric J.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-5289-630X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Hornbrook</surname><given-names>Rebecca S.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6304-6554</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff17">
          <name><surname>Kasibhatla</surname><given-names>Prasad S.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3562-3737</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff10 aff18">
          <name><surname>Kim</surname><given-names>Michelle J.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4922-4334</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff19">
          <name><surname>Luo</surname><given-names>Gan</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9588-7008</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff13 aff16">
          <name><surname>McKain</surname><given-names>Kathryn</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-8323-5758</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff8">
          <name><surname>Millet</surname><given-names>Dylan B.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3076-125X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff13 aff16">
          <name><surname>Moore</surname><given-names>Fred L.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff16 aff20">
          <name><surname>Peischl</surname><given-names>Jeffrey</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9320-7101</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff20">
          <name><surname>Ryerson</surname><given-names>Thomas B.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2800-7581</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff14 aff15">
          <name><surname>Sherwen</surname><given-names>Tomás</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3006-3876</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff7">
          <name><surname>Thames</surname><given-names>Alexander B.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Ullmann</surname><given-names>Kirk</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff11 aff21">
          <name><surname>Wang</surname><given-names>Xuan</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-8532-5773</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3 aff18">
          <name><surname>Wennberg</surname><given-names>Paul O.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6126-3854</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff22">
          <name><surname>Wolfe</surname><given-names>Glenn M.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6586-4043</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff19">
          <name><surname>Yu</surname><given-names>Fangqun</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8862-4835</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Department of Civil and Environmental Engineering, Massachusetts
Institute of Technology, Cambridge, MA, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Department of Earth,
Atmospheric and Planetary Sciences, Massachusetts Institute of Technology,
Cambridge, MA, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Division of Chemistry and Chemical Engineering,
California Institute of Technology, Pasadena, CA, USA</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Atmospheric
Chemistry Observations &amp; Modeling Laboratory, National Center for
Atmospheric Research,<?xmltex \hack{\break}?> Boulder, CO, USA</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Institute for
Climate and Atmospheric Science, School of Earth and Environment, University
of Leeds, Leeds, UK</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Department of Chemistry, University of
California Irvine, Irvine, CA, USA</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>Department of Meteorology,
Pennsylvania State University, University Park, PA, USA</institution>
        </aff>
        <aff id="aff8"><label>8</label><institution>University
of Minnesota, Department of Soil, Water and Climate, St. Paul, MN, USA</institution>
        </aff>
        <aff id="aff9"><label>9</label><institution>Dept. of Earth &amp; Environmental Sciences of Lamont-Doherty Earth
Observatory and Columbia University, <?xmltex \hack{\break}?>Palisades, NY, USA</institution>
        </aff>
        <aff id="aff10"><label>10</label><institution>Division of Geological and Planetary Sciences, California
Institute of Technology, Pasadena, CA, USA</institution>
        </aff>
        <aff id="aff11"><label>11</label><institution>Harvard John A.
Paulson School of Engineering and Applied Sciences, Harvard University,
Cambridge, MA, USA</institution>
        </aff>
        <aff id="aff12"><label>12</label><institution>NASA Langley Research Center, Hampton, VA,
USA</institution>
        </aff>
        <aff id="aff13"><label>13</label><institution>Global Monitoring Division, NOAA Earth System Research
Laboratory, Boulder, CO, USA</institution>
        </aff>
        <aff id="aff14"><label>14</label><institution>Wolfson Atmospheric Chemistry
Laboratories (WACL), Department of Chemistry, University of York, York, UK</institution>
        </aff>
        <aff id="aff15"><label>15</label><institution>National Centre for Atmospheric Science (NCAS), University of
York, York, UK</institution>
        </aff>
        <aff id="aff16"><label>16</label><institution>Cooperative Institute for Research in
Environmental Science, University of Colorado, CO, USA</institution>
        </aff>
        <aff id="aff17"><label>17</label><institution>Nicholas
School of the Environment, Duke University, Durham, NC, USA</institution>
        </aff>
        <aff id="aff18"><label>18</label><institution>Division of Engineering and Applied Science, California Institute
of Technology, Pasadena, CA, USA</institution>
        </aff>
        <aff id="aff19"><label>19</label><institution>Atmospheric Sciences Research
Center, University of Albany, Albany, NY, USA</institution>
        </aff>
        <aff id="aff20"><label>20</label><institution>Chemical Sciences
Division, NOAA Earth System Research Laboratory, Boulder, CO, USA</institution>
        </aff>
        <aff id="aff21"><label>21</label><institution>School of Energy and Environment, City University of Hong Kong,
Hong Kong, China</institution>
        </aff>
        <aff id="aff22"><label>22</label><institution>Atmospheric Chemistry and Dynamics Laboratory,
NASA Goddard Space Flight Center, Greenbelt, MD, USA</institution>
        </aff>
        <aff id="aff23"><label>a</label><institution>now at: NASA
Langley Research Center, Hampton, VA, USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Katherine R. Travis (katherine.travis@nasa.gov) and
Colette L. Heald (heald@mit.edu)</corresp></author-notes><pub-date><day>3</day><month>July</month><year>2020</year></pub-date>
      
      <volume>20</volume>
      <issue>13</issue>
      <fpage>7753</fpage><lpage>7781</lpage>
      <history>
        <date date-type="received"><day>11</day><month>October</month><year>2019</year></date>
           <date date-type="rev-request"><day>3</day><month>January</month><year>2020</year></date>
           <date date-type="rev-recd"><day>12</day><month>April</month><year>2020</year></date>
           <date date-type="accepted"><day>3</day><month>May</month><year>2020</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2020 </copyright-statement>
        <copyright-year>2020</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/.html">This article is available from https://acp.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e525">The global oxidation capacity, defined as the tropospheric mean concentration
of the hydroxyl radical (OH), controls the lifetime of reactive trace gases
in the atmosphere such as methane and carbon monoxide (CO). Models tend to
underestimate the methane lifetime and CO concentrations throughout the
troposphere, which is consistent with excessive OH. Approximately half of the
oxidation of methane and non-methane volatile organic compounds (VOCs) is
thought to occur over the oceans where oxidant chemistry has received little validation due to a lack of observational constraints. We use observations
from the first two deployments of the NASA ATom aircraft campaign during
July–August 2016 and January–February 2017 to evaluate the oxidation
capacity over the remote oceans and its representation by the GEOS-Chem
chemical transport model. The model successfully simulates the magnitude and
vertical profile of remote OH within the measurement uncertainties.
Comparisons against the drivers of OH production (water vapor, ozone, and
<inline-formula><mml:math id="M1" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> concentrations, ozone photolysis frequencies) also show
minimal bias, with the exception of wintertime <inline-formula><mml:math id="M2" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The severe model overestimate of <inline-formula><mml:math id="M3" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> during this period may
indicate insufficient wet scavenging and/or missing loss on sea-salt
aerosols. Large uncertainties in these processes require further study to
improve simulated <inline-formula><mml:math id="M4" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> partitioning and removal in the
troposphere, but preliminary tests suggest that their overall impact could marginally reduce the model bias in tropospheric OH. During the ATom-1
deployment, OH reactivity (OHR) below 3 km is significantly enhanced, and
this is not captured by the sum of its measured components
(cOHR<inline-formula><mml:math id="M5" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula>) or by the model (cOHR<inline-formula><mml:math id="M6" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula>). This enhancement
could suggest missing reactive VOCs but cannot be explained by a
comprehensive simulation of both biotic and abiotic ocean sources of VOCs.
Additional sources of VOC reactivity in this region are difficult to
reconcile with the full suite of ATom measurement constraints. The model
generally reproduces the magnitude and seasonality of cOHR<inline-formula><mml:math id="M7" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> but
underestimates the contribution of oxygenated VOCs, mainly acetaldehyde,
which is severely underestimated throughout the troposphere despite its
calculated lifetime of less than a day. Missing model acetaldehyde in
previous studies was attributed to measurement uncertainties that have been
largely resolved. Observations of peroxyacetic acid (PAA) provide new support
for remote levels of acetaldehyde. The underestimate in both model
acetaldehyde and PAA is present throughout the year in both hemispheres and
peaks during Northern Hemisphere summer. The addition of ocean sources of
VOCs in the model increases cOHR<inline-formula><mml:math id="M8" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> by 3 % to 9 % and
improves model–measurement agreement for acetaldehyde, particularly in winter, but cannot resolve the model summertime bias. Doing so would require
100 Tg yr<inline-formula><mml:math id="M9" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> of a long-lived unknown precursor throughout the year with
significant additional emissions in the Northern Hemisphere summer. Improving
the model bias for remote acetaldehyde and PAA is unlikely to fully resolve
previously reported model global biases in OH and methane lifetime, suggesting that future work should examine the sources and sinks of OH over land.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<?pagebreak page7754?><sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e630">The hydroxyl radical (OH) is the main oxidant responsible for removing trace
gases from the atmosphere, and its concentration defines the tropospheric
oxidation capacity. OH is primarily produced by the photolysis of ozone in
the presence of water vapor. The lifetimes of key atmospheric trace gases are
governed by how quickly they are removed by reaction with OH. Oxidation of
volatile organic compounds (VOCs) by OH produces tropospheric ozone and fine
particulate matter which are detrimental to human health and vegetation and
impact climate. The oxidation of VOCs, carbon monoxide (CO), and methane
provides the main sink of OH in the troposphere. Oxidation of methane and VOCs accounts for over half of the global CO production (Duncan et al., 2007;
Safieddine et al., 2017), resulting in a tight coupling of these compounds.</p>
      <p id="d1e633">Models generally overestimate global mean tropospheric OH and its ratio in
the Northern Hemisphere to Southern Hemisphere (Naik et al., 2013; Patra et al., 2014). These biases may be linked to the persistent CO underestimate in models
(Shindell et al., 2006), as prescribing OH from observations improves simulated CO (Müller et al., 2018). However, constraining models with
observations of ozone and water vapor cannot resolve biases in model OH
(Strode et al., 2015), which is impacted by additional complex factors such as the chemical mechanism and the ozone photolysis frequency (Nicely et al.,
2017). Constraining the performance of model chemical mechanisms has largely
focused on regions of strong biogenic and anthropogenic activity (Emmerson
and Evans, 2009; Yu et al., 2010; Marvin et al., 2017), but at least half of
the oxidation of methane occurs over the ocean, where models have received little evaluation due to a lack of observational constraints.</p>
      <p id="d1e636">The introduction of airborne measurements of OH reactivity (OHR) provides a
method to evaluate the sink of OH across a range of altitudes and a variety
of locations and chemical environments (Mao et al., 2009; Thames et al.,
2020). Previous work compared surface observations of OHR at a single site to
the sum of individually calculated OHR components from measurements (Di
Carlo, 2004; Yoshino et al., 2006; Sinha et al., 2008, 2010; Mao et al.,
2010; Dolgorouky et al., 2012; Hansen et al., 2014; Nakashima et al., 2014;
Nölscher et al., 2012, 2016; Ramasamy et al., 2016; Zannoni et al., 2016,
2017) or from simple models (Ren et al., 2006; Lee et al., 2009; Lou et al.,
2010; Mogensen et al., 2011; Mao et al., 2012; Edwards et al., 2013; Kaiser
et al., 2016; Whalley et al., 2016). Thames et al. (2020) found evidence of
missing OHR between measurements and an observationally constrained box<?pagebreak page7755?> model
during the first three ATom deployments. Chen et al. (2019) compared
calculated OHR from a global model to OHR determined from a suite of VOCs but
did not have measurements of OHR itself. Ferracci et al. (2018) found that
missing OHR estimated from surface observations could result in a small
increase in the methane lifetime in a global model. Safieddine et al. (2017)
and Lelieveld et al. (2016) presented the first global model simulations of
OHR but with only qualitative comparison to observations. No study has
quantitatively compared simulated and observed OHR in a global model in an
effort to constrain the OH sink.</p>
      <p id="d1e639">The ATom campaign (Wofsy et al., 2018) provides an unprecedented opportunity
to test models in the remote atmosphere with a detailed suite of chemical
observations. We simulate the first two deployments (ATom-1: July–Agust 2016, ATom-2: January–February 2017) using the GEOS-Chem chemical transport
model (CTM) as our tool to explore potential sources of systematic errors
that could explain the community-wide model overestimate in global mean OH
and underestimate of the methane lifetime. We include model evaluation with
measurements of OHR, a relatively new constraint available for assessing
atmospheric oxidation capacity. To our knowledge, this is the first
quantitative use of this measurement to evaluate a CTM.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Description of model and observations</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>The GEOS-Chem model</title>
      <p id="d1e657">We use the GEOS-Chem global 3-D CTM in v12.3.0
(<uri>http://www.geos-chem.org</uri>, last access: 2 July 2020) driven by assimilated meteorological data from the Goddard Earth
Observing System Modern-Era Retrospective analysis for Research and
Applications, Version 2 (MERRA-2; Gelaro et al., 2017). The native MERRA-2
model has a horizontal resolution of <inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.625</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> and
72 vertical levels which we degrade to <inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> and 47
vertical levels for use in GEOS-Chem. The midpoint of the first model layer
is 58 m. We use time steps of 20 min for chemistry and 10 min for
transport as recommended by Philip et al. (2016). GEOS-Chem includes detailed
treatment of
<inline-formula><mml:math id="M12" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>–<inline-formula><mml:math id="M13" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>–VOC–halogen–aerosol chemistry, with recent improvements for isoprene (Chan Miller et al., 2017; Fisher et
al., 2016; Marais et al., 2016; Travis et al., 2016), peroxyacetyl nitrate
(PAN) (Fischer et al., 2014), and halogen chemistry (Sherwen et al., 2016). The production of organic aerosols is calculated using fixed yields from
isoprene, monoterpenes, biomass burning, and anthropogenic fuel combustion
(Pai et al., 2020). Aerosol uptake of <inline-formula><mml:math id="M14" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is parameterized with a
reactive uptake coefficient (<inline-formula><mml:math id="M15" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula>) of 0.2 (Jacob, 2000) to produce
<inline-formula><mml:math id="M16" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> (Mao et al., 2013). Aerosol thermodynamic equilibrium is
calculated by ISORROPIA II v2.0 (Pye et al., 2009). Surface methane
concentrations are prescribed monthly using spatially interpolated
observations from the NOAA GMD flask network. We simulate the 2016–2017
period with an 18-month initialization.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e760">Annual emissions of CO and <inline-formula><mml:math id="M17" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for 2016 used in the GEOS-Chem
simulations.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Emissions category</oasis:entry>
         <oasis:entry colname="col2">CO, Tg</oasis:entry>
         <oasis:entry colname="col3">Emissions category</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M19" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, Tg N</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Fuel combustion<inline-formula><mml:math id="M20" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">590</oasis:entry>
         <oasis:entry colname="col3">Fuel combustion<inline-formula><mml:math id="M21" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">32.9</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Biomass burning</oasis:entry>
         <oasis:entry colname="col2">311</oasis:entry>
         <oasis:entry colname="col3">Biomass burning</oasis:entry>
         <oasis:entry colname="col4">6.0</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">NMVOC oxidation</oasis:entry>
         <oasis:entry colname="col2">698</oasis:entry>
         <oasis:entry colname="col3">Soil emissions</oasis:entry>
         <oasis:entry colname="col4">7.8</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Methane oxidation</oasis:entry>
         <oasis:entry colname="col2">936</oasis:entry>
         <oasis:entry colname="col3">Lightning emissions</oasis:entry>
         <oasis:entry colname="col4">6.0</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Total</oasis:entry>
         <oasis:entry colname="col2">2535</oasis:entry>
         <oasis:entry colname="col3">Total</oasis:entry>
         <oasis:entry colname="col4">52.7</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e774"><inline-formula><mml:math id="M18" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula> Anthropogenic fossil fuel and biofuel combustion.</p></table-wrap-foot></table-wrap>

      <p id="d1e921">Global fire emissions at 3-hourly resolution (Mu et al., 2011) for 2016 and
2017 are from the Global Fire Emissions Database (GFED4s; van der Werf et
al., 2017). The GFED4s burned area (Giglio et al., 2013) includes a
parameterization of small fires (Randerson et al., 2012). Biogenic VOC
emissions are from MEGANv2.1 (Guenther et al., 2012; Hu et al.,
2015). Global anthropogenic
emissions are from the Community Emissions Data System (CEDS) inventory
(Hoesly et al., 2018), overwritten by ethanol from the POET inventory
(Olivier et al., 2003; Granier et al., 2005), ethane from Tzompa-Sosa et
al. (2017), and regional inventories for the United States (NEI11v1, Travis
et al., 2016), Canada (CAC,
<uri>https://www.canada.ca/en/services/environment/pollution-waste-management/national-pollutant-release-inventory.html</uri>,
last access: 31 July 2013), Mexico
(BRAVO, Kuhns et al., 2003), Europe (EMEP,
<uri>http://www.emep.int/index.html</uri>, last access: 31 March 2015), Asia (MIX, Li et al., 2017), and Africa (DICE,
Marais and Wiedinmyer, 2016). Lightning emissions are constrained with
satellite data according to Murray et al. (2012) with a global flash rate of
280 mol NO flash<inline-formula><mml:math id="M22" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Marais et al., 2018). Air–sea exchange is
calculated for acetaldehyde (Millet et al., 2010), acetone (Fischer et al.,
2012), and dimethyl sulfide (Breider et al., 2017). All emissions are
processed by the Harvard Emissions Component (HEMCO, Keller et al.,
2014). Table 1 gives the 2016 emission
budget for CO and <inline-formula><mml:math id="M23" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e954">The standard simulation includes prescribed methanol concentrations. We
expand this simulation to include emissions and chemistry for methanol as
well as unsaturated <inline-formula><mml:math id="M24" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> compounds. Air–sea exchange of methanol is
specified using the methodology of Millet et al. (2008) with a constant
seawater concentration of 142 nM. Terrestrial biogenic methanol emissions
are from MEGANv2.1, and anthropogenic and biomass burning emissions are from the inventories described above. We likewise include biomass burning and
anthropogenic emissions of ethyne (<inline-formula><mml:math id="M25" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) and ethene
(<inline-formula><mml:math id="M26" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) along with terrestrial biogenic emissions of
<inline-formula><mml:math id="M27" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. Oxidation of <inline-formula><mml:math id="M28" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> by OH proceeds according to
the Master Chemical Mechanism (MCM) v3.3.1 (Jenkin et al.,
1997, 2015; Saunders et al.,
2003), via
<uri>http://mcm.leeds.ac.uk/MCM</uri> (last access: 8 February 2018). Simplified <inline-formula><mml:math id="M29" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> chemistry is included
based on Lamarque et al. (2012) with an updated OH rate constant from the MCM
v3.3.1. Table S1 in the Supplement shows the reactions and species included
for unsaturated <inline-formula><mml:math id="M30" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> compounds. The standard model does not consider
the OH reactivity of a subset of organic acids (RCOOH) from the oxidation of
VOCs. We implement oxidation of RCOOH and evaluate the impact of excluding
this species, which is minor, in Table S2 and Fig. S1 in the Supplement. The
model concentration of <inline-formula><mml:math id="M31" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is fixed at 500 ppt, consistent with
observed <inline-formula><mml:math id="M32" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from ATom-1 and ATom-2 (520 ppt).</p>
      <?pagebreak page7756?><p id="d1e1085">The GEOS-Chem global mean tropospheric OH ([OH]<inline-formula><mml:math id="M33" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">GM</mml:mi></mml:msub></mml:math></inline-formula>) is calculated
as an air-mass-weighted quantity below the model tropopause (see
<uri>http://wiki.seas.harvard.edu/geos-chem/index.php/Mean_OH_concentration</uri>,
last access: 4 May 2020, for the
calculation methodology). The [OH]<inline-formula><mml:math id="M34" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">GM</mml:mi></mml:msub></mml:math></inline-formula> for 2016 is <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mn mathvariant="normal">11.9</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> molecules cm<inline-formula><mml:math id="M36" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and the corresponding methane lifetime(<inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) is 9.0 years. This result is comparable to the multi-model
[OH]<inline-formula><mml:math id="M38" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">GM</mml:mi></mml:msub></mml:math></inline-formula> of <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:mn mathvariant="normal">11.1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> molecules cm<inline-formula><mml:math id="M40" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and <inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> of 9.7 years from Naik et al. (2013). The best
observationally derived estimate of <inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:mn mathvariant="normal">11.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.3</mml:mn></mml:mrow></mml:math></inline-formula> years (Prather et al., 2012), suggesting a model bias here of 20 %.
We calculate the ratio of total 2016 air-mass-weighted OH in the Northern
(&gt; 0<inline-formula><mml:math id="M44" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) to Southern Hemisphere
(&lt; 0<inline-formula><mml:math id="M45" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S) to be 1.14. This exceeds observationally derived
ratios of 0.85 to 0.97 (Montzka et al., 2000; Patra et al., 2014) but is at
the low end of previous model estimates ranging from 1.13 to 1.42 (Naik et
al., 2013).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><label>Figure 1</label><caption><p id="d1e1251">Annual mean 2016 <bold>(a)</bold> surface (log scale) and <bold>(b)</bold> zonal mean cOHR
calculated from individual model species. The GEOS-Chem species included in
the calculation of cOHR are listed in Table S3.</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f01.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Calculated OH reactivity</title>
      <p id="d1e1274">The atmosphere contains thousands of reactive organic compounds (Goldstein
and Galbally, 2007). Transforming the concentrations of these compounds and
reactive inorganics to calculated OH reactivity (cOHR) ranks them in order
of their importance as OH sinks. The cOHR from a model (cOHR<inline-formula><mml:math id="M46" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula>) can
then be compared to cOHR from a suite of measurements (cOHR<inline-formula><mml:math id="M47" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula>) where cOHR is defined by Eq. (1).
            <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M48" display="block"><mml:mtable rowspacing="0.2ex" columnspacing="1em" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">cOHR</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mfenced open="(" close=")"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msub><mml:mi>k</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mfenced close="]" open="["><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:msub><mml:mi>k</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:msub><mml:mfenced close="]" open="["><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:msub><mml:mi>k</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mfenced open="[" close="]"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:mo movablelimits="false">∑</mml:mo><mml:msub><mml:mi>k</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="normal">VOC</mml:mi></mml:mrow></mml:msub><mml:mfenced close="]" open="["><mml:mi mathvariant="normal">VOC</mml:mi></mml:mfenced><mml:mo>+</mml:mo><mml:mi mathvariant="normal">…</mml:mi></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
          Figure 1a shows annual surface cOHR<inline-formula><mml:math id="M49" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> for the year 2016 based on
the 90 components listed in Table S3. Figure 1b shows the zonal mean profile
below 12 km. Approximately 80 % of air-mass-weighted cOHR<inline-formula><mml:math id="M50" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula>
resides below 3 km. The average annual surface cOHR<inline-formula><mml:math id="M51" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> is
1.8 s<inline-formula><mml:math id="M52" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, with 40 % present over the ocean (average of 1.0 s<inline-formula><mml:math id="M53" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). Higher cOHR<inline-formula><mml:math id="M54" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> occurs in coastal outflow regions
and the lowest cOHR<inline-formula><mml:math id="M55" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> is present over the Southern Ocean. The
maximum cOHR<inline-formula><mml:math id="M56" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> (48 s<inline-formula><mml:math id="M57" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) over northern China is due to high
concentrations of <inline-formula><mml:math id="M58" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M59" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and CO. In the
tropics, elevated cOHR<inline-formula><mml:math id="M60" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> is mainly from isoprene, other biogenic
species, and CO.</p>

<?xmltex \floatpos{p}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e1531">Description of ATom measurements used to evaluate the model simulation.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Measurement</oasis:entry>
         <oasis:entry colname="col2">Instrument</oasis:entry>
         <oasis:entry colname="col3">Accuracy</oasis:entry>
         <oasis:entry colname="col4">Detection limit/</oasis:entry>
         <oasis:entry colname="col5">Reference</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">precision</oasis:entry>
         <oasis:entry colname="col5"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">OHR</oasis:entry>
         <oasis:entry colname="col2">Airborne Tropospheric</oasis:entry>
         <oasis:entry colname="col3">0.8 s<inline-formula><mml:math id="M75" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M77" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Faloona et al. (2004);</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Hydrogen Oxides Sensor</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Mao et al. (2009)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(ATHOS)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Water vapor</oasis:entry>
         <oasis:entry colname="col2">Diode laser hygrometer</oasis:entry>
         <oasis:entry colname="col3">5 %</oasis:entry>
         <oasis:entry colname="col4">0.1 % or 50 ppb</oasis:entry>
         <oasis:entry colname="col5">Diskin et al. (2002);</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(DLH)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Podolske et al. (2003)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M78" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">NOAA nitrogen oxides</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">0.05 ppb<inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Pollack et al. (2010);</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">and ozone (<inline-formula><mml:math id="M80" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Ryerson et al. (1998, 2000)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Photolysis frequencies</oasis:entry>
         <oasis:entry colname="col2">Charged-coupled device</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M81" display="inline"><mml:mrow class="chem"><mml:mi>j</mml:mi><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> 20 %</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M82" display="inline"><mml:mrow class="chem"><mml:mi>j</mml:mi><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> 10<inline-formula><mml:math id="M83" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Shetter and Mueller (1999),</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">via actinic flux</oasis:entry>
         <oasis:entry colname="col2">Actinic flux</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M85" display="inline"><mml:mrow class="chem"><mml:mi>j</mml:mi><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> 12 %</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M86" display="inline"><mml:mrow class="chem"><mml:mi>j</mml:mi><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> 10<inline-formula><mml:math id="M87" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Petropavloskikh et al. (2007),</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Spectroradiometers</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Hofzumahaus et al. (2004)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(CAFS)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Peroxyacetyl nitrate</oasis:entry>
         <oasis:entry colname="col2">PAN and trace</oasis:entry>
         <oasis:entry colname="col3">10 %</oasis:entry>
         <oasis:entry colname="col4">2 ppt <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> %</oasis:entry>
         <oasis:entry colname="col5">Elkins et al. (2001);</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">(PAN)</oasis:entry>
         <oasis:entry colname="col2">Hydrohalocarbon</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Wofsy et al. (2011)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">ExpeRiment (PANTHER)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col5">Components of OH reactivity<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">CH<inline-formula><mml:math id="M91" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">NOAA Picarro</oasis:entry>
         <oasis:entry colname="col3">0.6 ppb</oasis:entry>
         <oasis:entry colname="col4">0.3 ppb</oasis:entry>
         <oasis:entry colname="col5">Karion et al. (2013)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CO</oasis:entry>
         <oasis:entry colname="col2">Harvard Quantum Cascade</oasis:entry>
         <oasis:entry colname="col3">3.5 ppb</oasis:entry>
         <oasis:entry colname="col4">0.15 ppb</oasis:entry>
         <oasis:entry colname="col5">McManus et al. (2005);</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Laser System (QCLS)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Santoni et al. (2014)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">H<inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">4</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">UAS Chromatograph for</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">7.5 ppb<inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Hintsa et al. (2020)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Atmospheric Trace Species</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(UCATS)/PANTHER</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">NO, <inline-formula><mml:math id="M94" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M95" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">NOAA <inline-formula><mml:math id="M96" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">0.006, 0.03,</oasis:entry>
         <oasis:entry colname="col5">Pollack et al. (2010);</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">1.7 ppb<inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Ryerson et al. (1998, 2000)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Methyl hydroperoxide,</oasis:entry>
         <oasis:entry colname="col2">Caltech Chemical</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">30</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">30</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>,</oasis:entry>
         <oasis:entry colname="col4">25, 50,</oasis:entry>
         <oasis:entry colname="col5">St. Clair et al. (2010);</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">nitric acid, hydrogen</oasis:entry>
         <oasis:entry colname="col2">ionization mass</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">30</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">50</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>,</oasis:entry>
         <oasis:entry colname="col4">50, 30,</oasis:entry>
         <oasis:entry colname="col5">Crounse et al. (2006)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">peroxide, peroxyacetic</oasis:entry>
         <oasis:entry colname="col2">spectrometer (CIMS)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">30</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">100 ppt</oasis:entry>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">acid, peroxynitric acid</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Formaldehyde</oasis:entry>
         <oasis:entry colname="col2">NASA In Situ Airborne</oasis:entry>
         <oasis:entry colname="col3">10 %</oasis:entry>
         <oasis:entry colname="col4">10 ppt</oasis:entry>
         <oasis:entry colname="col5">Cazorla et al. (2015);</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Formaldehyde (ISAF)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">DiGangi et al. (2011);</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Hottle et al. (2009)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Methanol, acetaldehyde,</oasis:entry>
         <oasis:entry colname="col2">NCAR Trace Organic Gas</oasis:entry>
         <oasis:entry colname="col3">30 %, 20 %,</oasis:entry>
         <oasis:entry colname="col4">10, 10, 20,</oasis:entry>
         <oasis:entry colname="col5">Apel et al. (2015)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">propane, dimethyl sulfide,</oasis:entry>
         <oasis:entry colname="col2">Analyzer (TOGA)</oasis:entry>
         <oasis:entry colname="col3">30 %, 15 %,</oasis:entry>
         <oasis:entry colname="col4">2, 30, 10,</oasis:entry>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ethanol, acetone, methyl</oasis:entry>
         <oasis:entry colname="col2">30 %, 20 %,</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">2, 20, 2,</oasis:entry>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ethyl ketone, propanal<inline-formula><mml:math id="M103" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula>,</oasis:entry>
         <oasis:entry colname="col2">20 %, 20 %,</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">0.6, 4, 2</oasis:entry>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">butanal<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula>, toluene, methyl</oasis:entry>
         <oasis:entry colname="col2">30 %, 15 %,</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">2, 2, 4,</oasis:entry>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">vinyl ketone, methacrolein</oasis:entry>
         <oasis:entry colname="col2">20 %, 20 %</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">4 ppt</oasis:entry>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">i-Butane <inline-formula><mml:math id="M105" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> n-butane <inline-formula><mml:math id="M106" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">15 %, 15 %,</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">i-pentane <inline-formula><mml:math id="M107" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> n-pentane<inline-formula><mml:math id="M108" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">7</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">15 %, 15 %</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">OH, <inline-formula><mml:math id="M109" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">ATHOS</oasis:entry>
         <oasis:entry colname="col3">74 % to 135 %</oasis:entry>
         <oasis:entry colname="col4">0.018, 0.2 ppt</oasis:entry>
         <oasis:entry colname="col5">Faloona et al. (2004);</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Brune et al. (2020)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Ethane, benzene</oasis:entry>
         <oasis:entry colname="col2">UCI Whole air sampler</oasis:entry>
         <oasis:entry colname="col3">5 %, 5 %</oasis:entry>
         <oasis:entry colname="col4">3, 3 ppt</oasis:entry>
         <oasis:entry colname="col5">Colman et al. (2001);</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(WAS)</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5">Simpson et al. (2010)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e1534"><inline-formula><mml:math id="M61" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula> Model <inline-formula><mml:math id="M62" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is defined as <inline-formula><mml:math id="M63" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mi mathvariant="normal">HONO</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">5</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">ClNO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mo>∑</mml:mo><mml:mi mathvariant="normal">PNs</mml:mi><mml:mo>+</mml:mo><mml:mo>∑</mml:mo></mml:mrow></mml:math></inline-formula>ANs.
<inline-formula><mml:math id="M65" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> Average of <inline-formula><mml:math id="M66" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> uncertainty for each individual 1 Hz measurement
for ATom-1 and ATom-2.
<inline-formula><mml:math id="M67" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> Included in cOHR are observations of species where at least 20 % of
the possible available measurements below 3 km are not missing.
<inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msup></mml:math></inline-formula> The GEOS-Chem concentration of <inline-formula><mml:math id="M69" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is set to a constant value of
500 ppt.
<inline-formula><mml:math id="M70" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:math></inline-formula> Average of reported error for each individual measurement for ATom-1
and ATom-2.
<inline-formula><mml:math id="M71" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula> Lumped as &gt; <inline-formula><mml:math id="M72" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> alkanes (ALK4) in GEOS-Chem.
<inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">7</mml:mn></mml:msup></mml:math></inline-formula> Lumped as &gt; <inline-formula><mml:math id="M74" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> aldehydes (RCHO) in GEOS-Chem.</p></table-wrap-foot></table-wrap>

</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>ATom observations</title>
      <p id="d1e2830">The NASA ATom field campaign (Wofsy et al., 2018) sampled the remote
troposphere with the DC-8 aircraft over the Atlantic and Pacific oceans from approximately 200 m to 12 km altitude in four seasons from 2016 to 2018
with a goal of improving the representation of trace gases and short-lived
greenhouse gases in models of atmospheric chemistry and climate. We use data
here from the first two deployments (ATom-1 and ATom-2), which sampled winter and summer conditions in each hemisphere. We consider only observations over
the ocean (73 % of measurements). Flight tracks for ATom-1 with land
crossings removed are shown in Fig. 2; ATom-2 flight tracks are nearly
identical. We sample the model along the flight tracks, and both the model and observations are averaged to the model grid and time step for all the following
comparisons. The aircraft carried an extensive chemical payload including
observations of water vapor, methane, CO, OH, <inline-formula><mml:math id="M110" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, VOCs,
photolysis frequencies, and OHR. Table 2 describes the observations used in
this work.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><label>Figure 2</label><caption><p id="d1e2846">ATom-1 ocean-only flight tracks colored by altitude.</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f02.png"/>

        </fig>

      <?xmltex \floatpos{p}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><label>Figure 3</label><caption><p id="d1e2857">Median OH concentrations for the Northern Hemisphere
(&gt; 0<inline-formula><mml:math id="M111" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) and Southern Hemisphere
(&lt; 0<inline-formula><mml:math id="M112" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S) from the ATHOS instrument described in Table 2
during ATom-1 (July–August 2016) and ATom-2 (January–February 2017)
compared against the GEOS-Chem model in 0.5 km altitude bins. The
observations have been filtered to remove biomass burning (acetonitrile
&gt; 200 ppt) and stratospheric
(<inline-formula><mml:math id="M113" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> &gt; 1.25) influence. The dashed lines show the
observed 25th–75th percentiles.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f03.png"/>

        </fig>

      <?xmltex \floatpos{p}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><label>Figure 4</label><caption><p id="d1e2902">The same as Fig. 3 for median water vapor concentrations. Water
vapor mixing ratio was measured by the DLH instrument as described in Table 2.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f04.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Comparison of simulated and measured OH</title>
      <?pagebreak page7758?><p id="d1e2920">We compare observed and simulated OH concentrations to evaluate whether
differences are consistent with the bias in <inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> discussed
in Sect. 2.1. Figure 3 shows modeled OH sampled along the flight tracks and
compared to observed OH (Table 2) for ATom-1 (boreal summer 2016) and ATom-2
(boreal winter 2017) in each hemisphere from the lowest sampled altitude
(<inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> m) to 10 km. There is no evidence of a systematic overestimate
in modeled OH throughout the troposphere. Figure S2 shows similarly good
agreement across the observed frequency distributions of OH concentration. A
model OH overestimate is apparent in the lowest 2 km in the Northern
Hemisphere summer that could indicate excessive OH production or an
underestimated sink from emissions of ocean VOCs. Global models tend to
overestimate OH against constraints from methyl chloroform observations
(Shindell et al., 2006; Naik et al., 2013; Nicely et al., 2017), but we find
here that tropospheric OH is successfully simulated within observational
uncertainty (74 % to 135 %, <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> confidence level). This
result from a global CTM is consistent with good agreement between OH
measurements and a box model during NASA's Pacific Exploratory Mission –
Tropics (PEM-Tropic B) campaign in the clean remote Pacific (Tan et al.,
2001) and a similar analysis by Brune et al. (2020) for ATom 1 through 4.</p>
      <p id="d1e2958">We calculate the median air-mass-weighted column average OH
(OH<inline-formula><mml:math id="M117" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">col</mml:mi></mml:msub></mml:math></inline-formula>) from the median OH concentrations in Fig. 3 and the total
tropospheric air mass over the ocean. During ATom-1, the modeled OH<inline-formula><mml:math id="M118" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">col</mml:mi></mml:msub></mml:math></inline-formula> in the Northern (Southern) Hemisphere is <inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.5</mml:mn><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1.4</mml:mn><mml:mo>)</mml:mo><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> molecules cm<inline-formula><mml:math id="M120" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> compared against the observations of
<inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.4</mml:mn><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1.1</mml:mn><mml:mo>)</mml:mo><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> molecules cm<inline-formula><mml:math id="M122" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> during ATom-1. Similarly,
during ATom-2, OH<inline-formula><mml:math id="M123" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">col</mml:mi></mml:msub></mml:math></inline-formula> is <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.8</mml:mn><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2.8</mml:mn><mml:mo>)</mml:mo><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> molecules cm<inline-formula><mml:math id="M125" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the model and <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.9</mml:mn><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2.6</mml:mn><mml:mo>)</mml:mo><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> molecules cm<inline-formula><mml:math id="M127" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the observations. Median model
OH<inline-formula><mml:math id="M128" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">col</mml:mi></mml:msub></mml:math></inline-formula> is within 30 % of observations during both deployments,
with the smallest bias in the total column during Northern Hemisphere summer
when OH is at a maximum. As discussed above, model OH is overestimated in the
lowest 2 km during this period, but this bias is minimized in the column
average. The observed air-mass-weighted ratio of Northern to Southern
Hemisphere OH, calculated in the same manner as described in Sect. 2, is 2.8
during ATom-1 and 0.2 during ATom-2, indicating a strong seasonality that the
model largely reproduces (ratios of 2.3 and 0.2). This ratio is less than the
ratio of OH<inline-formula><mml:math id="M129" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">col</mml:mi></mml:msub></mml:math></inline-formula> because there is approximately 30 % less
air mass over the ocean in the Northern Hemisphere ocean than over the Southern Hemisphere. This seasonality is masked by calculations performed on
an annual mean basis. The seasonality in this ratio reported by Wolfe et
al. (2019) for satellite-derived OH during ATom-1 and ATom-2 is more modest
because they calculate a daily average OH that extends to the tropopause, while here, we use largely daytime aircraft observations below 10 km.</p>
      <p id="d1e3140">The model is in good agreement with OH measurements during ATom, but the
uncertainty in the observations is similar to a recent estimate of the
GEOS-Chem model uncertainty for OH of 25 % to 40 % (Christian et al.,
2018). In addition, the lifetime of OH is short (seconds) and atmospheric
concentrations are highly variable; thus, direct model comparison to measured OH is insufficient to demonstrate model skill in capturing the broader remote
oxidation capacity. Agreement between the model and observations could also
result from compensating errors in the OH source and sink. We support the
model comparison in Fig. 3 with an evaluation of the key factors governing OH
production and loss measured by ATom and investigate potential missing
sources of VOCs from the ocean during summertime.</p>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Constraints on the remote source of OH</title>
      <?pagebreak page7760?><p id="d1e3151">In the remote troposphere, OH is primarily produced from the photolysis of
ozone in the presence of water vapor (Monks, 2005) and is enhanced by
nitrogen oxides (<inline-formula><mml:math id="M130" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) from lightning and transport from
continental sources. Methane, CO, and VOCs provide the main OH sinks (Murray
et al., 2014). We compare the model to ATom-1 and ATom-2 observations of the
drivers of the tropospheric OH source (water vapor, ozone, ozone photolysis
frequency, <inline-formula><mml:math id="M131" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) to determine possible broader sources of model bias.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><label>Figure 5</label><caption><p id="d1e3178">The same as Fig. 3 for median photolysis frequencies for ozone
(<inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:mi>j</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mrow class="chem"><mml:mi mathvariant="normal">O</mml:mi></mml:mrow><mml:mn mathvariant="normal">1</mml:mn></mml:msup><mml:mrow class="chem"><mml:mi mathvariant="normal">D</mml:mi></mml:mrow><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>). The actinic flux measured
by the CAFS instrument is used to calculate
<inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:mi>j</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mrow class="chem"><mml:mi mathvariant="normal">O</mml:mi></mml:mrow><mml:mn mathvariant="normal">1</mml:mn></mml:msup><mml:mrow class="chem"><mml:mi mathvariant="normal">D</mml:mi></mml:mrow><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> as
described in Table 2.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f05.png"/>

      </fig>

      <?xmltex \floatpos{p}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><label>Figure 6</label><caption><p id="d1e3231">The same as Fig. 3 for median ozone concentrations. Ozone was
measured by the NOAA <inline-formula><mml:math id="M134" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> instrument as described in Table 2.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f06.png"/>

      </fig>

      <p id="d1e3257">Figure 4 compares observations of water vapor mixing ratios to the NASA
MERRA-2 reanalysis product used by the model. MERRA-2 is generally
successful at reproducing observed tropospheric water vapor (Gelaro et al.,
2017), and we also find good agreement compared with ATom-1 and ATom-2 observations throughout the troposphere. We evaluate the model treatment of
the incoming actinic flux and the resulting ozone photolysis frequency
(<inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:mi>j</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mrow class="chem"><mml:mi mathvariant="normal">O</mml:mi></mml:mrow><mml:mn mathvariant="normal">1</mml:mn></mml:msup><mml:mrow class="chem"><mml:mi mathvariant="normal">D</mml:mi></mml:mrow><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>) in Fig. 5. Hall et al. (2018) showed that GEOS-Chem actinic fluxes in both cloudy and clear skies
were well simulated during the ATom-1 deployment. Figure 5 confirms the
minimal model bias in <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:mi>j</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mrow class="chem"><mml:mi mathvariant="normal">O</mml:mi></mml:mrow><mml:mn mathvariant="normal">1</mml:mn></mml:msup><mml:mrow class="chem"><mml:mi mathvariant="normal">D</mml:mi></mml:mrow><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and successful representation of the observed
seasonality with median summertime values below 3 km (<inline-formula><mml:math id="M137" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M138" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) approximately 4 times higher than in winter
(<inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M140" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>).</p>
      <p id="d1e3367">The GEOS-Chem ozone simulation has been extensively tested against
ozonesondes, aircraft, and satellite observations and shows no systematic
overestimates (Hu et al., 2017), with the exception of continental surface concentrations (Fiore et al., 2009; Travis et al., 2016). Figure 6 shows that
the highest (54–63 ppb) and lowest (14 ppb) tropospheric ozone observed
during ATom-1 and ATom-2 occurs during summer in the mid to upper troposphere and marine boundary layer, respectively. Ozone is less variable in wintertime,
with values between 30 and 50 ppb. The model generally reproduces the
magnitude and shape of the tropospheric ozone profiles as well as the
seasonality observed during both deployments. There is no evidence of the
systematic Northern Hemisphere ozone bias previously seen in global model
evaluations (Young et al., 2013) that was suggested as a cause of excessive
OH (Naik et al., 2013). This may be reflected in the improved model
interhemispheric OH ratio (Sect. 2.1) seen here over previous studies. Upper
tropospheric ozone is overestimated in all cases but Northern Hemisphere
summer, but this would not have a large influence on primary OH production
(or the methane lifetime) at these altitudes (Brune et al., 2020).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><?xmltex \currentcnt{7}?><label>Figure 7</label><caption><p id="d1e3372">The same as Fig. 3 for median <inline-formula><mml:math id="M141" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> <bold>(a)</bold> and NO <bold>(b)</bold>
concentrations. <inline-formula><mml:math id="M142" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and NO were measured by the NOAA <inline-formula><mml:math id="M143" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
instrument as described in Table 2.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f07.png"/>

      </fig>

      <p id="d1e3425">OH is enhanced in the presence of <inline-formula><mml:math id="M144" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M145" display="inline"><mml:mo lspace="0mm">≡</mml:mo></mml:math></inline-formula><inline-formula><mml:math id="M146" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>). We
use <inline-formula><mml:math id="M147" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> here (Fig. 7a) as our constraint as observed <inline-formula><mml:math id="M148" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was
generally near the detection limit in both deployments. We also show NO
(Fig. 7b) given its role in secondary OH production. The model reproduces
the maximum in <inline-formula><mml:math id="M149" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> that occurs in the Northern Hemisphere upper
troposphere in summertime due to lightning (Marais et al., 2018).
Observations show little variability between summer and winter <inline-formula><mml:math id="M150" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in
the lower troposphere. Southern Hemisphere <inline-formula><mml:math id="M151" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is underestimated in the
lowest few kilometers in both seasons, which could be due to missing ocean production of methyl nitrate (Fisher et al., 2018). The largest model
discrepancy is an overestimate of approximately 70 % in the Northern
Hemisphere wintertime. Observations of NO reflect the structure of <inline-formula><mml:math id="M152" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>,
with the exception of Northern Hemisphere winter.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><label>Figure 8</label><caption><p id="d1e3529">Comparison of modeled and observed <inline-formula><mml:math id="M153" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, ozone,
<inline-formula><mml:math id="M154" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and NO with sensitivity studies including scaling emissions from the US and Asia, improved chlorine chemistry (X. Wang et al.,
2019), and the photolysis of particulate nitrate on coarse-mode sea-salt
aerosols (Kasibhatla et al., 2018) as described in Sect. 4.1. <inline-formula><mml:math id="M155" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
was measured by the Caltech CIMS; ozone, <inline-formula><mml:math id="M156" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and NO were measured by the NOAA <inline-formula><mml:math id="M157" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> instrument (Table 2).</p></caption>
        <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f08.png"/>

      </fig>

<sec id="Ch1.S4.SSx1" specific-use="unnumbered">
  <?xmltex \opttitle{Causes of the remote model bias in {$\protect\chem{NO_{\mathit{y}}}$}}?><title>Causes of the remote model bias in <inline-formula><mml:math id="M158" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></title>
      <p id="d1e3615">Figure 8 shows that the model <inline-formula><mml:math id="M159" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> overestimate in winter is primarily
caused by nitric acid (<inline-formula><mml:math id="M160" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>). Excessive remote <inline-formula><mml:math id="M161" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is a
long-standing model deficiency (Bey et al., 2001; Staudt et al., 2003;
Brunner et al., 2003, 2005). The model bias identified here is unlikely to
result from overestimated continental emissions due to the short lifetime of
<inline-formula><mml:math id="M162" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> against deposition (<inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> d in the Northern
Hemisphere winter). Models suggest that less than 40 % of emitted
<inline-formula><mml:math id="M164" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the US is exported downwind (Dentener et al., 2006; Zhang et
al., 2012). However, the standard model configuration here does not address
the large possible bias in the US anthropogenic <inline-formula><mml:math id="M165" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> inventory of
<inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> (Anderson et al., 2014; Travis et al., 2016) or the
downward trend in <inline-formula><mml:math id="M167" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> emissions from Asia of <inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">30</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula>
since 2011 (Krotkov et al., 2016). As expected, scaling Asian and US <inline-formula><mml:math id="M169" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> emissions by these percentages improves the model bias in winter by
only 15 % below 3 km (Fig. 8). Recent improvements to the simulation of
continental wintertime <inline-formula><mml:math id="M170" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (Jaeglé et al., 2018) would similarly
be expected to have a marginal effect in our study region.</p>
      <p id="d1e3755">Kasibhatla et al. (2018) showed that acid displacement of chloride
(<inline-formula><mml:math id="M171" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">Cl</mml:mi><mml:mo>-</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>) by <inline-formula><mml:math id="M172" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> on sea-salt aerosols (SSA) could resolve
model overestimates of gas-phase <inline-formula><mml:math id="M173" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in the marine boundary layer
using the GEOS-Chem model. A more comprehensive simulation of this process
was developed by X. Wang et al. (2019). Figure 8 shows sensitivity tests with
the mechanism from X. Wang et al. (2019) incorporated into our simulation in
the Northern Hemisphere winter. Model <inline-formula><mml:math id="M174" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> decreases by
approximately 100 ppt below 3 km, which would significantly improve the wintertime <inline-formula><mml:math id="M175" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> bias in this region, but the free tropospheric
bias remains. The displacement of <inline-formula><mml:math id="M176" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">Cl</mml:mi><mml:mo>-</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> described above generates
particulate nitrate on coarse-mode SSA (NITs). Photolysis of nitrate has been
proposed as a source of <inline-formula><mml:math id="M177" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> to the marine boundary layer (Ye
et al., 2016; Romer et al., 2018), which might increase <inline-formula><mml:math id="M178" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. We include NITs photolysis at a frequency of 50 times that of <inline-formula><mml:math id="M179" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
(Kasibhatla et al., 2018). Figure 8 shows that this mechanism is consistent
with observations of NO and ozone below 3 km and does not increase
<inline-formula><mml:math id="M180" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> but increases the free tropospheric <inline-formula><mml:math id="M181" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> bias
due to PAN formation and exacerbates the overestimate in upper tropospheric
ozone during this season.</p>
      <?pagebreak page7762?><p id="d1e3880">The difficulty in resolving the bias in wintertime may be due to an
overestimate of the <inline-formula><mml:math id="M182" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> lifetime as demonstrated by our sensitivities
discussed above. Luo et al. (2019) proposed a new treatment of model wet
scavenging using spatially and temporally varying cloud condensation water
content and an empirical description of <inline-formula><mml:math id="M183" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> wet removal. This scheme
drastically reduced persistent model biases in nitric acid and nitrate at
the surface in the United States (Zhang et al., 2012; Heald et al., 2012).
As shown in Fig. 8, the revised wet scavenging scheme could fully resolve
the remote bias in <inline-formula><mml:math id="M184" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> throughout the troposphere. However, this
parameterization has only received testing over the surface of the
continental US, and more evaluation is needed before it can be adopted widely in models.</p>
      <p id="d1e3916">We find that scaling <inline-formula><mml:math id="M185" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, implementing chlorine chemistry,
and revised wet scavenging (except in Northern Hemisphere winter) have
negative impacts on the modeled OH<inline-formula><mml:math id="M186" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">col</mml:mi></mml:msub></mml:math></inline-formula> along the flight tracks of
<inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> %, <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7</mml:mn></mml:mrow></mml:math></inline-formula> %, and <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula> %, respectively. The addition of NITs
photolysis to the chlorine chemistry simulation increases OH<inline-formula><mml:math id="M190" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">col</mml:mi></mml:msub></mml:math></inline-formula>
by 11 % over the base model. In Northern Hemisphere winter only, revised
wet scavenging increases OH<inline-formula><mml:math id="M191" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">col</mml:mi></mml:msub></mml:math></inline-formula> by 16 %, possibly due to the<?pagebreak page7763?> effect of reduced heterogeneous chemistry. Overall, the annual mean impact of
revised wet scavenging from our preliminary sensitivity tests is a <inline-formula><mml:math id="M192" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> %
reduction in global mean air-mass-weighted OH and a <inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> % increase in
the model methane lifetime. These preliminary sensitivities suggest that
resolving the model wintertime <inline-formula><mml:math id="M194" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> bias in the Northern
Hemisphere could marginally reduce the overestimates of global mean OH on an
annual basis if the photolysis frequency of NITs is smaller than 50 times the
rate of <inline-formula><mml:math id="M195" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> photolysis. Recent work from the NASA KORUS-AQ field
campaign found that a rate of 1 to 30 might be more consistent with
observational constraints (Romer et al., 2018).</p>
      <p id="d1e4031">Overall, the main drivers of remote tropospheric OH production in our
base-case simulation are in good agreement with observations from the first
two ATom deployments, with the exception of an <inline-formula><mml:math id="M196" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> overestimate in the Northern Hemisphere wintertime. Acid displacement of <inline-formula><mml:math id="M197" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">Cl</mml:mi><mml:mo>-</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> by
<inline-formula><mml:math id="M198" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> on SSA (Kasibhatla et al., 2018; X. Wang et al., 2019) may
somewhat improve remote <inline-formula><mml:math id="M199" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> below 3 km, but if the resulting NITs
undergoes photolysis at a rate of 50 times that of <inline-formula><mml:math id="M200" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (Kasibhatla et
al., 2018), the impact on remote <inline-formula><mml:math id="M201" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> may be lessened due to the formation of PAN. Both mechanisms require significant further study as
tropospheric halogen sources and chemistry and the photolysis frequency of
NITs are highly uncertain. A new parameterization of wet scavenging (Luo et
al., 2019) would greatly improve modeled remote <inline-formula><mml:math id="M202" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HNO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M203" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> but
requires further testing and evaluation of its broader impacts on
atmospheric chemistry.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{9}?><label>Figure 9</label><caption><p id="d1e4125">The same as Fig. 3 for median OHR. OHR was measured by the ATHOS
instrument as described in Table 2. The calculation of cOHR in the model and
observations includes the species described in Table 2. In order to allow
for a point-by-point comparison of cOHR in the model and observations,
missing values are filled in the observational components of cOHR using
linear interpolation. All calculated reactivity values are determined using
the temperature and pressure of the ATHOS instrument inlet, which differ from ambient values. The sensitivity tests are described in Sect. 5.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f09.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S5">
  <label>5</label><title>Constraints on the remote sink of OH</title>
      <p id="d1e4144">The primary sinks of tropospheric OH are CO, methane, and VOCs; OHR
measurements represent the sum effect of these species. Previous aircraft
measurements of OHR provided evidence of missing reactivity in the remote
atmosphere linked to unknown highly reactive VOCs (Mao et al., 2009). During
ATom, Thames et al. (2020) measured OHR over the Atlantic and Pacific oceans
and determined that missing OHR also correlated with oxygenated VOCs,
suggesting the presence of unknown ocean emissions. We compare directly
measured OHR during the ATom-1 and ATom-2 deployments to calculated OHR
(cOHR<inline-formula><mml:math id="M204" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula>) according to Eq. (1) from the full ATom measurement suite and
from the model (cOHR<inline-formula><mml:math id="M205" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula>) sampled along the flight path. Table 2
describes the observations used to calculate cOHR.</p>
      <p id="d1e4165">Figure 9 shows the comparison of OHR and cOHR from the model and
observations. The observed cOHR is typically less than observed OHR. Along
the flight tracks, cOHR<inline-formula><mml:math id="M206" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> and cOHR<inline-formula><mml:math id="M207" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> show good
agreement and strong correlation (<inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.95</mml:mn></mml:mrow></mml:math></inline-formula> for ATom-1 and ATom-2). The
model underestimates cOHR<inline-formula><mml:math id="M209" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> by 10 % to 12 % in the
lowest 3 km; we discuss this difference below. The measured relationship
between OHR and cOHR<inline-formula><mml:math id="M210" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> is weaker (<inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.53</mml:mn></mml:mrow></mml:math></inline-formula> for ATom-1,
<inline-formula><mml:math id="M212" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.56</mml:mn></mml:mrow></mml:math></inline-formula> for ATom-2) and cOHR<inline-formula><mml:math id="M213" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> is less than OHR below 3 km
by 0.2 to 0.4 s<inline-formula><mml:math id="M214" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Thames et al. (2020) showed that median missing
reactivity (between OHR and an observationally constrained box model) below
4 km during the ATom-1, ATom-2, and ATom-3 deployments was between 0.2 and
0.8 s<inline-formula><mml:math id="M215" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. They provided statistical evidence that while near the level
of the instrument accuracy, missing OHR in the marine boundary layer was
statistically significant. We find that missing OHR is not associated with
acetonitrile or CO (<inline-formula><mml:math id="M216" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> &lt; 0.06), indicating that biomass
burning is not the cause. Acetaldehyde in Northern Hemisphere summer has the
strongest relationship with missing OHR (<inline-formula><mml:math id="M217" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.19</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M218" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>-value <inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:mo>≪</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">0.01</mml:mn></mml:mrow></mml:math></inline-formula>, Fig. S3), which suggests a potential role for unmeasured
reactive VOCs or their oxidation products from the ocean, as also suggested
by Read et al. (2012) and Thames et al. (2020).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e4331">Biogenic ocean emissions of VOCs.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">GEOS-Chem</oasis:entry>
         <oasis:entry colname="col2">No. of lumped</oasis:entry>
         <oasis:entry colname="col3">Produces</oasis:entry>
         <oasis:entry colname="col4">Annual net</oasis:entry>
         <oasis:entry colname="col5">Reference for seawater</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">species<inline-formula><mml:math id="M223" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">species</oasis:entry>
         <oasis:entry colname="col3">acetaldehyde?</oasis:entry>
         <oasis:entry colname="col4">emissions (Tg C)<inline-formula><mml:math id="M224" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">concentration</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">ALD2</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">12.02</oasis:entry>
         <oasis:entry colname="col5">Millet et al. (2010)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MOH</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">No</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M225" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.54</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Personal communication, Dylan B. Millet, 2018</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ACET</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">No</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">75.65</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Fischer et al. (2012)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">LIMO</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">0.04</oasis:entry>
         <oasis:entry colname="col5">Hackenberg et al. (2017)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MTPA</oasis:entry>
         <oasis:entry colname="col2">3</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">0.05</oasis:entry>
         <oasis:entry colname="col5">Hackenberg et al. (2017)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MTPO</oasis:entry>
         <oasis:entry colname="col2">2</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">0.06</oasis:entry>
         <oasis:entry colname="col5">Hackenberg et al. (2017)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">EOH</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M227" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5.52</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Beale et al. (2010)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C2H6</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">0.33</oasis:entry>
         <oasis:entry colname="col5">Plass-Dülmer et al. (1993)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C2H4</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">No</oasis:entry>
         <oasis:entry colname="col4">0.75</oasis:entry>
         <oasis:entry colname="col5">Plass-Dülmer C. et al. (1993)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">PRPE</oasis:entry>
         <oasis:entry colname="col2">2</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">0.95</oasis:entry>
         <oasis:entry colname="col5">Plass-Dülmer C. et al. (1993)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C3H8</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">0.16</oasis:entry>
         <oasis:entry colname="col5">Plass-Dülmer et al. (1993)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ALK4</oasis:entry>
         <oasis:entry colname="col2">2</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">0.12</oasis:entry>
         <oasis:entry colname="col5">Plass-Dülmer et al. (1993)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">C2H2</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">No</oasis:entry>
         <oasis:entry colname="col4">0.02</oasis:entry>
         <oasis:entry colname="col5">Plass-Dülmer et al. (1993)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ISOP</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">1.64</oasis:entry>
         <oasis:entry colname="col5">Arnold et al. (2009)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">RCHO</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.03</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Singh et al. (2003)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">MEK</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M229" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7.214</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">Schlundt et al. (2017)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3">Total net emission </oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">74.82</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry namest="col1" nameend="col3">Total net emission producing acetaldehyde </oasis:entry>
         <oasis:entry colname="col4">1.60</oasis:entry>
         <oasis:entry colname="col5"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e4334"><inline-formula><mml:math id="M220" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula> Net ocean
emissions <inline-formula><mml:math id="M221" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> upward flux out of the ocean–ocean uptake. <inline-formula><mml:math id="M222" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> More
information on the GEOS-Chem species definitions can be found here:
<uri>http://wiki.seas.harvard.edu/geos-chem/index.php/Species_in_GEOS-Chem</uri>
(last access: 21 May 2020).</p></table-wrap-foot></table-wrap>

      <?pagebreak page7765?><p id="d1e4800">Ocean emissions of VOCs have been suggested as a source of remote secondary
organic aerosols (Gantt et al., 2010; Kim et al., 2017; Mungall et al.,
2017), but their impact on remote reactivity has not been quantified. Our
base simulation, described in Sect. 2.1, only includes air–sea exchange of
acetone, acetaldehyde, methanol, and dimethyl sulfide. We determine whether
additional compounds emitted from the ocean, but not generally included in
models, could increase cOHR<inline-formula><mml:math id="M231" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> and reconcile the observed
discrepancy described above. We follow the standard methodology for air–sea
exchange described in Millet et al. (2008) to include emission of the species
listed in Table 3 using available measured seawater concentrations, with the
addition of isoprene implemented as a direct emission according to Arnold et
al. (2009). As shown in Table 3, air–sea exchange represents a net sink of
VOCs on an annual basis (<inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">75</mml:mn></mml:mrow></mml:math></inline-formula> Tg C yr<inline-formula><mml:math id="M233" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), but this is mainly due to
ocean uptake of acetone, which is a negligible component of cOHR.</p>
      <p id="d1e4834">Interfacial photochemistry may provide an additional abiotic source of VOCs
from the ocean. We model abiotic ocean emissions of VOCs according to
Brüggemann et al. (2018) by applying species-specific emission factors
to the monthly ocean photochemical potential derived in their study. We use
the emission factor appropriate for the upper bound of this source according
to Brüggemann et al. (2017) (Table S4). Table 4 provides a breakdown of
these additional VOCs with a total annual emission of 28 Tg C yr<inline-formula><mml:math id="M234" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10" specific-use="star"><?xmltex \currentcnt{10}?><label>Figure 10</label><caption><p id="d1e4851">Impact of all ocean emissions (Tables 3 and 4) on annual
simulated 2016 surface cOHR as described in the text.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f10.png"/>

      </fig>

      <p id="d1e4860">Figure 10 shows the annual mean impact of all ocean emissions described in
Tables 3 and 4 (including an adjustment to the acetaldehyde seawater
concentration described below in Sect. 5.1) on cOHR<inline-formula><mml:math id="M235" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> by turning
off those ocean sources in a 1-year simulation. Average annual surface
cOHR<inline-formula><mml:math id="M236" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> over the ocean increases by 6 % over the base
simulation and 12 % over the simulation with no ocean emissions. The
largest increases occur in regions of higher biogenic activity along
coastlines and in the Southern Ocean due to the adjustment to acetaldehyde
emissions discussed in Sect. 5.1. The incremental impact of the additional
ocean emissions over the base simulation is shown in Fig. S4. Without any
ocean emissions, global mean OH would be 2 % greater than in the case
with comprehensive treatment of ocean VOCs. Figure 9 shows that along the
flight tracks, cOHR<inline-formula><mml:math id="M237" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> increases below 3 km by 3 % to
9 %, which reduces the model bias against cOHR<inline-formula><mml:math id="M238" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula>. However, the majority of the added species (Tables 3 and 4) were measured during ATom,
would therefore contribute to cOHR<inline-formula><mml:math id="M239" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula>, and cannot explain the gap in OHR.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4"><?xmltex \currentcnt{4}?><label>Table 4</label><caption><p id="d1e4911">Abiotic ocean emissions of VOCs according to
Brüggemann et al. (2018<inline-formula><mml:math id="M240" display="inline"><mml:mrow><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.98}[.98]?><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">GEOS-Chem</oasis:entry>
         <oasis:entry colname="col2">No. of lumped</oasis:entry>
         <oasis:entry colname="col3">Produces</oasis:entry>
         <oasis:entry colname="col4">Annual</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">species<inline-formula><mml:math id="M243" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">species</oasis:entry>
         <oasis:entry colname="col3">acetaldehyde?</oasis:entry>
         <oasis:entry colname="col4">emission</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">(Tg C)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">ACET</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">No</oasis:entry>
         <oasis:entry colname="col4">10.07</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">EOH</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">5.16</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ALD2</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">2.26</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MOH</oasis:entry>
         <oasis:entry colname="col2">2</oasis:entry>
         <oasis:entry colname="col3">No</oasis:entry>
         <oasis:entry colname="col4">0.79</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">RCHO</oasis:entry>
         <oasis:entry colname="col2">21</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">3.88</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ISOP</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">1.04</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">PRPE</oasis:entry>
         <oasis:entry colname="col2">13</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">4.44</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MACR</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">0.42</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">ACTA</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">Yes</oasis:entry>
         <oasis:entry colname="col4">0.10</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">CH2O</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">No</oasis:entry>
         <oasis:entry colname="col4">0.03</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">XYLE</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">No</oasis:entry>
         <oasis:entry colname="col4">0.05</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">TOLU</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">No</oasis:entry>
         <oasis:entry colname="col4">0.04</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">BENZ</oasis:entry>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">No</oasis:entry>
         <oasis:entry colname="col4">0.02</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3">Total net emission </oasis:entry>
         <oasis:entry colname="col4">28.30</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry namest="col1" nameend="col3">Total net emission producing acetaldehyde </oasis:entry>
         <oasis:entry colname="col4">17.30</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table><?xmltex \begin{scaleboxenv}{.98}[.98]?><table-wrap-foot><p id="d1e4925"><inline-formula><mml:math id="M241" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula> Table S2 shows the emission factor assumed for each species and the
lumping methodology for Table 4.
<inline-formula><mml:math id="M242" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> More information on the GEOS-Chem species definitions can be found
here:
<uri>http://wiki.seas.harvard.edu/geos-chem/index.php/Species_in_GEOS-Chem</uri> (last access: 21 May 2020).</p></table-wrap-foot><?xmltex \end{scaleboxenv}?></table-wrap>

      <p id="d1e5234">We evaluate the impact of further expanding the oceanic source of reactive
VOCs to reconcile the discrepancy between cOHR<inline-formula><mml:math id="M244" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> and OHR in a
similar manner to Mao et al. (2009). Here, we test a source of alkanes as
previously suggested by Read et al. (2012), using the model species ALK4
(&gt; <inline-formula><mml:math id="M245" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> alkanes) that has a calculated lifetime of less
than 2 d in the Northern Hemisphere summer (<inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">OH</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2.3</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> cm<inline-formula><mml:math id="M247" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> molecules<inline-formula><mml:math id="M248" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M249" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> at 298 K). Known alkanes
have been measured in seawater (Plass-Dülmer et al., 1993), but the
implied source is small. Consequently, we use ALK4 for testing only.
Generating the missing OHR in this way requires an implausibly large oceanic
ALK4 source of approximately 340 Tg C yr<inline-formula><mml:math id="M250" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> compared against all other
sources of VOCs in the model (Tables 3 and 4). A sensitivity test with this
source, shown in Fig. 9, largely closes the gap between cOHR<inline-formula><mml:math id="M251" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula>
and OHR but would result in a 20 % to 50 % reduction in OH below
3 km, biasing the model OH simulation (Fig. 3) and degrading model
<inline-formula><mml:math id="M252" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. 7) due to increased PAN formation.</p>
      <p id="d1e5348">Thames et al. (2020) found that a partial recycling of OH would be required
to maintain consistency with observed OH and <inline-formula><mml:math id="M253" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> during ATom when
adding an unknown source of reactivity. If the unknown VOC we suggest
includes some OH recycling in its oxidation mechanism and does not produce
PAN, the model bias in OH could be mitigated. We use isoprene as our test of
a more reactive VOC that includes OH recycling by scaling the ALK4 emission
source by the reaction rate of isoprene with OH to obtain a more reasonable
emission source of approximately 9 Tg C yr<inline-formula><mml:math id="M254" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Figure 9 shows that
this source actually has a minimal impact on cOHR<inline-formula><mml:math id="M255" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> of no more
than 0.1 s<inline-formula><mml:math id="M256" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Only one-third in summer and two-thirds in winter of the
additional cOHR<inline-formula><mml:math id="M257" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> from the ocean source of ALK4 are attributable to ALK4; the rest is due to CO, acetaldehyde, and other aldehydes from both
increased chemical production and longer lifetimes from suppressed OH.
Therefore, a larger source of even a reactive VOC like isoprene is required
to close the gap in missing OHR. Reconciling cOHR<inline-formula><mml:math id="M258" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> and OHR is
therefore difficult using the existing suite of ATom measurement constraints
and possible known precursors; further investigation of the accuracy of the
OHR measurements in challenging remote conditions may be needed.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11" specific-use="star"><?xmltex \currentcnt{11}?><label>Figure 11</label><caption><p id="d1e5416">Median observed and modeled OHR and cOHR (see text)
below 3 km in the Northern Hemisphere (&gt; 0<inline-formula><mml:math id="M259" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N)
and Southern Hemisphere (&lt; 0<inline-formula><mml:math id="M260" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S) during ATom-1.
The “Other” category is the following species as described in Table 2: ethanol, propane, ethane, acetone, &gt; <inline-formula><mml:math id="M261" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> aldehydes, methyl
ethyl ketone, methyl vinyl ketone, methacrolein, benzene, toluene,
&gt; <inline-formula><mml:math id="M262" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> alkanes, peroxyacetic acid, peroxynitric acid, dimethyl
sulfide, nitric acid, NO, and <inline-formula><mml:math id="M263" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. The diameter of each pie chart is
scaled relative to the maximum cOHR for ATom-1.</p></caption>
        <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f11.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12" specific-use="star"><?xmltex \currentcnt{12}?><label>Figure 12</label><caption><p id="d1e5478">Same as Fig. 10 but for ATom-2. The diameter of each pie
chart is scaled relative to the maximum cOHR for ATom-2.</p></caption>
        <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f12.png"/>

      </fig>

      <p id="d1e5487">We also assess whether the model accurately represents the components of
cOHR<inline-formula><mml:math id="M264" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> and explore potential additional sources of missing
cOHR<inline-formula><mml:math id="M265" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula>. Figures 11 and 12 show the components of median cOHR in the
base simulation below 3 km for each deployment. The composition of
cOHR<inline-formula><mml:math id="M266" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> is generally consistent with cOHR<inline-formula><mml:math id="M267" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula>. CO and methane make
up half or greater of both cOHR<inline-formula><mml:math id="M268" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> and cOHR<inline-formula><mml:math id="M269" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula>. There is no
systematic underestimate in CO reactivity as might be expected from the
general model bias described by Shindell et al. (2006), with the exception
of a 9 % underestimate during Northern Hemisphere winter when the
lifetime of CO is longer and biases in continental sources could have a
larger impact. During the ATom-1 deployment, cOHR<inline-formula><mml:math id="M270" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> is 50 % higher
in the Northern Hemisphere (summer) than in the Southern Hemisphere (winter)
primarily due to the increase in methyl hydroperoxide (MHP) concentrations.
During the ATom-2 deployment, cOHR<inline-formula><mml:math id="M271" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> is 60 % higher in the Northern
Hemisphere (winter) than in the Southern Hemisphere<?pagebreak page7767?> (summer) due to the
large contribution of CO in Northern Hemisphere wintertime. The model
successfully represents the observed seasonality during both deployments but
underestimates cOHR<inline-formula><mml:math id="M272" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> by 12 % in the Northern Hemisphere and 9 % in the Southern Hemisphere.</p>
      <p id="d1e5573">The difference between measured and simulated cOHR is mainly due to
differences between measured and simulated OVOCs. These compounds contribute on average 25 % to cOHR<inline-formula><mml:math id="M273" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> but 17 % to
cOHR<inline-formula><mml:math id="M274" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula>. The largest difference in reactivity is from
acetaldehyde. Differences between simulated and measured MHP (Fig. S5) are
also important and could reflect an error in the MHP lifetime (Müller et
al., 2016). However, interferences in the MHP measurement in the boundary
layer (Supplement, Sect. S6) have yet to be
resolved, and therefore we do not further evaluate causes of underestimated
MHP here. We do consider potential missing sources of model acetaldehyde
constrained by the ATom measurements over the ocean and assess their impact
on simulated OH and CO in Sect. 5.1.</p>
<sec id="Ch1.S5.SSx1" specific-use="unnumbered">
  <title>Evaluation of the remote sources of acetaldehyde</title>
      <p id="d1e5599">Inability to reconcile remote acetaldehyde observations with models is a
long-standing problem (Singh et al., 2001., 2003; Millet et
al., 2010; Nicely et al., 2016). Singh et al. (2001) proposed that a large,
diffuse, and as-yet unknown source of OVOCs such as acetaldehyde must exist
in the troposphere to solve this discrepancy. Read et al. (2012) determined
that missing cOHR<inline-formula><mml:math id="M275" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> from OVOCs (mainly acetaldehyde) in the marine
tropical atmosphere, possibly from terrestrial or ocean sources of alkanes,
could cause up to an 8 % underestimation of the methane lifetime. Nicely
et al. (2016) showed that constraining a box model with observed
acetaldehyde reduced tropospheric column OH by 9 % and that this
acetaldehyde bias was present across eight different CTMs. Therefore,
understanding the source of missing acetaldehyde may be part of the cause of
the multi-model bias in the methane lifetime and global mean OH.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13" specific-use="star"><?xmltex \currentcnt{13}?><label>Figure 13</label><caption><p id="d1e5613">The same as Fig. 3 for median acetaldehyde profiles. Acetaldehyde
was measured by the TOGA instrument as described in Table 2. The sensitivity
studies are described in Sect. 5.1.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f13.png"/>

        </fig>

      <p id="d1e5622">Figure 13 compares the model simulation of acetaldehyde against observations.
Average observed concentrations peak in the Northern Hemisphere during ATom-1
with an average mixing ratio of 230 ppt below 3 km and 100 ppt above 3 km
despite a lifetime of only several hours in summer. The maximum model
underestimate occurs during this period. Observed concentrations are at a
minimum during the ATom-2 deployment, indicating a strong seasonality in the
source. In each deployment, concentrations remain as high as 70 to 100 ppt
as far south as 60<inline-formula><mml:math id="M276" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S (Fig. S6), which the model does not reproduce. There is no apparent difference in model bias between observations over the
Atlantic or Pacific Ocean (Fig. S7). The model underestimates acetaldehyde on
average by 60 to 90 % (50 to 200 ppt) below 3 km and does not capture
the observed elevated levels throughout the troposphere.</p>
      <p id="d1e5634">In earlier studies, measurement uncertainties prevented interpretation of
model–measurement disagreements in the remote atmosphere, including
difficulties in background subtraction (Apel et al., 2008), with
uncertainties as high as 70 ppt (Apel et al., 2003), which hindered analysis of clean conditions. The ATom measurement uncertainty is reduced to
10 ppt/20 % (Table 2) and does not have the biases present in previous
campaigns (S. Wang et al., 2019). Studies have also disputed whether observed
acetaldehyde was compatible with observed PAN due to the significant role of
acetaldehyde as a PAN precursor through production of the<?pagebreak page7768?> peroxyacetyl (PA)
radical (Singh et al., 2001, 2003; Millet et al., 2010). Global simulations
estimate that acetaldehyde is responsible for approximately 40 % of PA
radical production (Fischer et al., 2014), which would be even larger if
acetaldehyde is severely underestimated by models. Reaction of the PA radical
with <inline-formula><mml:math id="M277" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is more prevalent in remote environments and produces
peroxyacetic acid (PAA) preferentially over PAN, making PAA a more useful
constraint for the conditions sampled by ATom. Figure 14 shows the average
model underestimate of PAA below 3 km of 70 % to 90 % (60 to
250 ppt). The model biases for PAA and acetaldehyde both peak with similar
magnitude during Northern Hemisphere summer. Figure 15 shows the model
comparison with PAN, which is generally well simulated during this period.</p>
      <p id="d1e5649">S. Wang et al. (2019) used an observationally constrained box model to show
that the levels of acetaldehyde observed during ATom are required to explain
the observed PAA. The reaction rate of PAA <inline-formula><mml:math id="M278" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> OH may be 3 times larger (Wu
et al., 2017) than the maximum value used by S. Wang et al. (2019), which could result in even better agreement between PAA and acetaldehyde in the
marine boundary layer. We evaluate the standard GEOS-Chem acetaldehyde
budget, described in detail by Millet et al. (2010), against available ATom
observations. The 2016 model budget for the base simulation is provided in
Table 5. Acetaldehyde is produced from oxidation of VOCs (ethane, propane,
<inline-formula><mml:math id="M279" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M280" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> alkanes, <inline-formula><mml:math id="M281" display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M282" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> alkenes, isoprene,
ethanol) and is directly emitted from the ocean, terrestrial plant growth,
biomass burning, and anthropogenic activities. The model parameterization of
acetaldehyde ocean emissions is dependent on satellite-based observations of
colored dissolved organic matter (CDOM) (Millet et al., 2010).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T5"><?xmltex \currentcnt{5}?><label>Table 5</label><caption><p id="d1e5698">Model sources of acetaldehyde in 2016.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Sources (Tg yr<inline-formula><mml:math id="M284" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:msup><mml:mo>)</mml:mo><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Millet et al.</oasis:entry>
         <oasis:entry colname="col3">This</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(2010)</oasis:entry>
         <oasis:entry colname="col3">work</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Photochemical production</oasis:entry>
         <oasis:entry colname="col2">128</oasis:entry>
         <oasis:entry colname="col3">166</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Net ocean emission</oasis:entry>
         <oasis:entry colname="col2">57</oasis:entry>
         <oasis:entry colname="col3">22</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Terrestrial plant growth</oasis:entry>
         <oasis:entry colname="col2">23</oasis:entry>
         <oasis:entry colname="col3">26</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M285" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> decay</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Biomass burning</oasis:entry>
         <oasis:entry colname="col2">3</oasis:entry>
         <oasis:entry colname="col3">3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Anthropogenic</oasis:entry>
         <oasis:entry colname="col2">2</oasis:entry>
         <oasis:entry colname="col3">2</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">emission</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Total source</oasis:entry>
         <oasis:entry colname="col2">213</oasis:entry>
         <oasis:entry colname="col3">219</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e5701"><inline-formula><mml:math id="M283" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula> Emissions are given in Tg of acetaldehyde per year for comparison to
Millet et al. (2010). These totals are for the baseline model simulation
described in Sect. 2.1.</p></table-wrap-foot></table-wrap>

      <p id="d1e5868">The model free tropospheric bias suggests that long-lived oxidation of VOCs
must be underestimated due to the short lifetime of acetaldehyde
(&lt; 1 d). The longest-lived precursor VOCs in the model are ethane
(2 months) and propane (2 weeks). Ethane has the highest concentration of any
measured non-methane VOC during ATom, with an average of 1.5 ppb below 3 km during the Northern Hemisphere winter. The model underestimates average
ethane and propane below 10 km by approximately 25 % and 60 %,
respectively<?pagebreak page7769?> (Figs. S8 and S9), which could be due to underestimated natural geologic and fossil fuel emissions (Dalsøren et al., 2018). However, the
oxidation of these species is too slow to provide the missing model
acetaldehyde and would only marginally increase remote background levels even
if it was produced at higher yield at low <inline-formula><mml:math id="M286" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (model yields
are <inline-formula><mml:math id="M287" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">50</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> for ethane and <inline-formula><mml:math id="M288" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> for propane, Millet et al., 2010). The chemical mechanism used for these species is provided in Table S5.
One or more precursors able to resolve the model acetaldehyde bias must
therefore be present at higher cumulative concentrations than ethane or
propane. Modeled ALK4, parameterized as a butane–pentane mixture, maintains a high acetaldehyde yield at low <inline-formula><mml:math id="M289" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and has a shorter
lifetime (<inline-formula><mml:math id="M290" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> d), contributing to a larger perturbation to atmospheric
acetaldehyde levels than ethane or propane for a given concentration change.
The sensitivity test adding substantial ALK4 emissions from the ocean
described in Sect. 4 would not resolve the free tropospheric bias in the
Northern Hemisphere but would result in a 40 % overestimate below 1 km.
Furthermore, ALK4 is too short-lived to substantially perturb the remote
atmosphere from a continental source; thus, the potential missing acetaldehyde precursors (from either a marine or terrestrial source) must have a longer
lifetime.</p>
      <p id="d1e5929">As shown in Table 5, primary ocean emissions of acetaldehyde in the base
simulation (22 Tg yr<inline-formula><mml:math id="M291" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) are lower than previous work
(57 Tg yr<inline-formula><mml:math id="M292" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), likely due to updates to the model parameterization of the water transfer velocity (Johnson, 2010). Additional independent estimates
of the ocean source are also much larger (34 to 42 Tg yr<inline-formula><mml:math id="M293" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, Read et
al., 2012; S. Wang et al., 2019). However, an increased primary ocean source
would not address the bias in the free troposphere or in winter when biogenic
activity from CDOM is zero in the model at high latitudes. Ship-borne
measurements generally measure non-zero acetaldehyde seawater concentrations
of approximately 5 nM (Read et al., 2012), and a recent trans-Atlantic
campaign found that acetaldehyde concentrations from 47<inline-formula><mml:math id="M294" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S to
50<inline-formula><mml:math id="M295" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N did not always correlate with levels of CDOM (Yang et al.,
2014). Therefore, we set a minimum seawater concentration of 5 nM in the
model parameterization regardless of CDOM level. This change adds
2 Tg C yr<inline-formula><mml:math id="M296" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in emissions and increases concentrations over the remote
ocean in winter by up to 50 ppt.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F14" specific-use="star"><?xmltex \currentcnt{14}?><label>Figure 14</label><caption><p id="d1e6001">The same as Fig. 3 for median peroxyacetic acid (PAA)
profiles. PAA was measured by the Caltech CIMS instrument as described in
Table 2. The sensitivity studies are described in Sect. 5.1.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f14.png"/>

        </fig>

      <?xmltex \floatpos{p}?><fig id="Ch1.F15" specific-use="star"><?xmltex \currentcnt{15}?><label>Figure 15</label><caption><p id="d1e6013">The same as Fig. 3 for median peroxyacetyl nitrate (PAN)
profiles. PAN was measured by the PANTHER instrument as described in Table 2. The sensitivity studies are described in Sect. 5.1.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/20/7753/2020/acp-20-7753-2020-f15.png"/>

        </fig>

      <p id="d1e6022">Figure 13 shows the combined effect of adding new ocean VOCs in Sect. 5 and
improving the seawater parameterization described above on modeled
acetaldehyde (labeled “Improve Ocean VOCs”). Although the direct ocean
source in this work is lower than previous estimates as described above, the
secondary source from precursor VOCs is enhanced. Of the additional marine
VOCs described in Sect. 5, 19 Tg C yr<inline-formula><mml:math id="M297" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> produce acetaldehyde as an
oxidation product (Tables 3 and 4). This is compared to 12 Tg C yr<inline-formula><mml:math id="M298" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
of direct emissions in the base model. These sources substantially increase
average modeled acetaldehyde below 3 km, with the largest improvement during
winter (40 to 60 ppt) when atmospheric lifetimes are longer and the
influence of the ocean can extend aloft. In summer, the average model
increase below 3 km is only 10 to 20 ppt due to higher OH concentrations.
Recent work over North America suggested that free tropospheric VOCs may be
underestimated due to errors in model vertical mixing (Chen et al. 2019), but
in Northern Hemisphere summer slower mixing would not be expected to
compensate for the short lifetime of acetaldehyde in this region (<inline-formula><mml:math id="M299" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> h). Thus, the pervasive model bias in the free troposphere cannot be
explained by an increase in known direct or indirect ocean sources.</p>
      <p id="d1e6059">Photodegradation of organic aerosols (OA) is another potential source of
oxygenated VOCs such as acetaldehyde to the troposphere (Kwan et al., 2006;
Epstein et al., 2014; Wong et al., 2015; S. Wang et al., 2019). The source of
secondary organic aerosols (SOA) is uncertain and has been suggested to be up
to 4 times larger than current estimates given an implied underestimate of
the photochemical loss term (Hodzic et al., 2016). We test the potential
impact of the maximum possible source of acetaldehyde from photochemical loss
of OA by increasing the overall model production of SOA by a factor of 4 to
maximize the impact of Reaction (R2) below. We apply a photolysis frequency
for OA of <inline-formula><mml:math id="M300" display="inline"><mml:mrow><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup><mml:msub><mml:mi>J</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (Hodzic et al., 2015) to Reactions (R1) and (R2) as an upper limit and describe the formulation of
Reactions (R1) and (R2) below. 

                <disp-formula specific-use="gather" content-type="numbered reaction"><mml:math id="M301" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.R2"><mml:mtd><mml:mtext>R1</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">OCPI</mml:mi><mml:mo>+</mml:mo><mml:mi>h</mml:mi><mml:mi mathvariant="italic">υ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">ALD</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.R3"><mml:mtd><mml:mtext>R2</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">SOAS</mml:mi><mml:mo>+</mml:mo><mml:mi>h</mml:mi><mml:mi mathvariant="italic">υ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.66</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">SOAS</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">ALD</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            The model species OCPI and SOAS represent the majority of simulated OA in the
remote atmosphere. OCPI is aged (hydrophilic) organic carbon
(12 g C mol<inline-formula><mml:math id="M302" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) and SOAS is SOA from all emissions categories (150 g mol<inline-formula><mml:math id="M303" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). Both are assumed for the purposes of the sensitivity
tests here to have an <inline-formula><mml:math id="M304" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OA</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">OC</mml:mi></mml:mrow></mml:math></inline-formula> ratio of 2.1. In Reaction (R1), one
molecule of carbon (0.5 ALD2) is produced per reaction. In Reaction (R2), one
acetaldehyde molecule (ALD2) is produced per reaction. The resulting impact
on acetaldehyde is only appreciable in the Northern Hemisphere winter
(Fig. 13), when modeled aerosol amounts are highest and the lifetime of
acetaldehyde is long. Given that this test represents an upper limit, we
conclude that photolysis of organic aerosols cannot provide a sufficient
source of acetaldehyde to reconcile the model with observations.</p>
      <?pagebreak page7771?><p id="d1e6187">We consider whether an entirely unknown VOC with moderate lifetime and a high
yield of acetaldehyde at low <inline-formula><mml:math id="M305" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> could resolve the
free tropospheric model bias. We emit such a species with a lifetime of approximately 1 month against oxidation by OH, emissions of
100 Tg yr<inline-formula><mml:math id="M306" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> from either anthropogenic, biomass burning, or ocean
sources, and a yield of one acetaldehyde molecule per reaction with OH. We do
not test a terrestrial biogenic source here but expect the results would be
similar to the biomass burning case. These simulations result in average
tropospheric concentrations of 1 to 5 ppb. The effect of the unknown VOC is
compatible with the model simulation of OH (unlike the addition of oceanic
ALK4 needed to reconcile OHR observations as described in Sect. 5). The
maximum cOHR<inline-formula><mml:math id="M307" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula> of this species is small
(&lt; 0.03 s<inline-formula><mml:math id="M308" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). The impact on modeled acetaldehyde (Fig. 13) is
generally similar across all three source categories due to the long lifetime
of this precursor. As shown in Figs. 13 and 14, the addition of this unknown
VOC modestly improves the simulation of acetaldehyde and PAA everywhere, but
a large residual underestimate in Northern Hemisphere summer remains. The
impact on PAN is minor, with the exception of Northern Hemisphere winter (Fig. 15), but this is likely driven by the model overestimate in
<inline-formula><mml:math id="M309" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. 7, Sect. 4.1).</p>
      <p id="d1e6245">Emission inventories of VOCs are known to be incomplete, for example
neglecting emissions from volatile consumer products (McDonald et al., 2018)
or failing to identify as much as half of emitted VOCs from biomass burning
(Akagi et al. 2011), both of which peak in summer. The average emission
factor for unidentified VOCs from biomass burning roughly corresponds to 75 Tg yr<inline-formula><mml:math id="M310" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, similar to our sensitivity tests of 100 Tg yr<inline-formula><mml:math id="M311" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> described
above. However, recent attempts to quantify these unidentified VOCs
(Stockwell et al., 2015; Koss et al., 2018) find that newly identified
compounds tend to be too reactive to impact the remote atmosphere, as needed
here; however, this work is ongoing and future efforts should investigate
potential precursors of acetaldehyde that could be transported to the remote
atmosphere. The missing source of precursor VOCs would need to have
substantial additional summertime emissions above and beyond the sensitivity
tests shown in Fig. 13 to address the Northern Hemisphere summertime bias.
The required magnitude of this perturbation is difficult to reconcile within
known measurement and emission uncertainty constraints.</p>
</sec>
</sec>
<sec id="Ch1.S6" sec-type="conclusions">
  <label>6</label><title>Conclusions</title>
      <p id="d1e6281">The detailed set of chemical information available from the ATom field
campaign provides the most comprehensive dataset ever collected to evaluate
models in the remote atmosphere. The sampling strategy of collecting
observations throughout the troposphere in multiple seasons is ideally suited
for improving our understanding of tropospheric chemistry in a poorly
observed region of the atmosphere. We use the first two deployments of the
ATom field campaign during July–August 2016 and January–February 2017 to
investigate sources of bias in model simulations of OH. Global models such as
the GEOS-Chem CTM used here tend to overestimate the loss of methane by OH
and underestimate CO, which provides the main tropospheric sink of OH. Comparisons of the model with observations from the first two ATom
deployments do not show systematic bias in the simulation of OH or the
drivers of remote OH production (water vapor, photolysis of ozone, ozone, and
<inline-formula><mml:math id="M312" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>), with the exception of wintertime <inline-formula><mml:math id="M313" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>,
which is overestimated by 70 %.</p>
      <p id="d1e6306">The model overestimate of wintertime <inline-formula><mml:math id="M314" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is largely
attributable to nitric acid. This bias is not due to an anthropogenic
inventory overestimate but may reflect insufficient wet scavenging as well as loss to sea-salt aerosols by nitric acid, although the former mechanism may
be counteracted by photolysis of the resulting nitrate aerosols. The impact
of resolving this wintertime <inline-formula><mml:math id="M315" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> bias is uncertain but could
marginally reduce the model overestimate of OH. Future work should improve
constraints on these mechanisms, which have all received only preliminary
validation, and carefully examine their impact in the context of broader
atmospheric chemistry, particularly <inline-formula><mml:math id="M316" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> partitioning
throughout the troposphere.</p>
      <p id="d1e6342">We present the first comparison of measured OH reactivity (OHR) from aircraft
with a global model to evaluate the tropospheric sink of OH. We calculate OH
reactivity (cOHR<inline-formula><mml:math id="M317" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula>) from relevant species observed during ATom
and compare this to cOHR from the model (cOHR<inline-formula><mml:math id="M318" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mod</mml:mi></mml:msub></mml:math></inline-formula>). Measured OHR
is higher than cOHR<inline-formula><mml:math id="M319" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">obs</mml:mi></mml:msub></mml:math></inline-formula> by approximately 0.2 to 0.4 s<inline-formula><mml:math id="M320" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
below 3 km. This missing OHR correlates with acetaldehyde during summer,
indicating a potential source of missing reactive VOCs, similar to the
findings of Mao et al. (2009) and S. Wang et al. (2020). The addition of a
comprehensive set of ocean emissions of VOCs increases global mean cOHR by
6 % but cannot reproduce the observed OHR enhancement during ATom-1.
Adding sufficient alkanes to the model to resolve this bias requires an
improbably large ocean source (340 Tg C yr<inline-formula><mml:math id="M321" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) and would degrade the
model simulation of OH and <inline-formula><mml:math id="M322" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. Only one-third of the
increase in cOHR in summer in this test is due to the alkanes; the rest is
from oxidation products and changes in OH. Therefore, a more reactive VOC
would still need to be emitted in large amounts.</p>
      <p id="d1e6408">The model successfully simulates the seasonality and hemispheric gradient in
cOHR but has a persistent underestimate of up to 12 % in the lowest 3 km, primarily due to missing model acetaldehyde. The model does not
underestimate CO, with the exception of Northern Hemisphere winter, which has
been previously recognized by Kopacz et al. (2010) and attributed to
underestimated fossil fuel emissions. The inability to reproduce observations
of remote acetaldehyde was first observed during the PEM-Tropics campaign
(Singh et al., 2001, 2003; Millet et al., 2010), but the measurement was
uncertain. Improvements in measurement precision and the accompanying
measurement of PAA during ATom (S. Wang et al., 2019) strengthen the
conclusion that there is a large amount of acetaldehyde present in the
atmosphere that cannot be explained by current models. We investigate
possible underestimates in known sources of acetaldehyde, including emissions
of VOCs from anthropogenic, biomass, or oceanic sources or production from
the photolysis of organic aerosols. No known source can fully resolve the
bias in acetaldehyde throughout the troposphere, and particularly in the
Northern Hemisphere<?pagebreak page7772?> summer. We consider the possibility that there is a
large, diffuse source of unknown VOCs by implementing 100 Tg yr<inline-formula><mml:math id="M323" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> of
such a compound from ocean, biomass burning, or anthropogenic sources. This
hypothetical source modestly reduces the model acetaldehyde bias and is
compatible with the simulation of OH and cOHR; however, an additional source
is required to resolve the largest bias in the Northern Hemisphere summer.
Errors or omissions in the oxidation mechanism of known VOCs could be another
source of bias. For example, significant uncertainties exist in peroxy
radical (<inline-formula><mml:math id="M324" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) chemistry for large <inline-formula><mml:math id="M325" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> molecules (Praske
et al., 2017), although the flux of carbon through a minor pathway would have
to be large, restricting the possible known sources. Further laboratory and
field observations are needed to understand which precursors and sources
could lead to the sustained production of acetaldehyde observed during ATom
and prior campaigns.</p>
      <p id="d1e6446">This study demonstrates that long-standing model biases in global mean OH are
unlikely to be due to errors in simulating tropospheric chemistry over the
ocean. This implies that a large bias must be present in OH production or
loss over land and future work should focus on evaluating continental OH
sources and sinks. Errors in modeled OH were recently investigated by Strode
et al. (2015), and when overestimates related to production terms were
corrected, model OH remained too high in the Northern Hemisphere, suggesting
that future studies should focus on errors in OH loss.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e6453">The ATom-1 and ATom-2 data (Wofsy et al., 2018) are
available here: <ext-link xlink:href="https://doi.org/10.3334/ORNLDAAC/1581" ext-link-type="DOI">10.3334/ORNLDAAC/1581</ext-link>.</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e6459">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/acp-20-7753-2020-supplement" xlink:title="pdf">https://doi.org/10.5194/acp-20-7753-2020-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e6468">CLH and KRT designed the study and wrote the paper with input from the
co-authors. KRT modified the code, performed the simulations, and led the
analysis. HMA, ECA, DRB, WHB, RC, JDC, BCD, GSD, JWE, SRH, EJH, SRH, MJK, KM,
FLM, JP, TBR, ABT, KU, POW, and GMW provided ATom measurements used in the
analysis. XW provided the model code for the sensitivity runs including acid
displacement of chloride on coarse-mode sea-salt aerosols. TS, ME, and PSK
provided the model code for the photolysis of particulate nitrate. GL and FY
were responsible for the code for the revised treatment of wet scavenging in
the model. DBM and XC provided the methanol seawater concentration and
assisted in the ocean budget analysis. SRA provided the biogenic ocean
isoprene emissions.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e6474">The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e6480">We are grateful for helpful conversations and advice from Andrea Molod,
Rachel Silvern, Eloïse Marais, Sarah Safieddine, Martin Brüggemann,
Christian George, and James Crawford. We acknowledge Tom Hanisco and
Jason St. Clair for the use of their formaldehyde observations from ATom and
Barbara Barletta and Simone Meinardi for their contribution to the UCI WAS
measurements.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e6485">This research has been supported by the National Science Foundation (grant no. AGS-1564495), the National Center for Atmospheric Research (grant no. 1852977), the National Oceanic and Atmospheric Administration (grant no. NA18OAR4310110), and the National Aeronautics and Space Administration
(grant no. NNX14AP89G, grant no. IAT NNH15AB12I, grant no. NNX17AG35G, grant no.
NNX15AG61A, grant no. NNX15AG71A).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e6491">This paper was edited by Yafang Cheng and reviewed by three anonymous referees.</p>
  </notes><ref-list>
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    <!--<article-title-html>Constraining remote oxidation capacity with ATom observations</article-title-html>
<abstract-html><p>The global oxidation capacity, defined as the tropospheric mean concentration
of the hydroxyl radical (OH), controls the lifetime of reactive trace gases
in the atmosphere such as methane and carbon monoxide (CO). Models tend to
underestimate the methane lifetime and CO concentrations throughout the
troposphere, which is consistent with excessive OH. Approximately half of the
oxidation of methane and non-methane volatile organic compounds (VOCs) is
thought to occur over the oceans where oxidant chemistry has received little validation due to a lack of observational constraints. We use observations
from the first two deployments of the NASA ATom aircraft campaign during
July–August 2016 and January–February 2017 to evaluate the oxidation
capacity over the remote oceans and its representation by the GEOS-Chem
chemical transport model. The model successfully simulates the magnitude and
vertical profile of remote OH within the measurement uncertainties.
Comparisons against the drivers of OH production (water vapor, ozone, and
NO<sub><i>y</i></sub> concentrations, ozone photolysis frequencies) also show
minimal bias, with the exception of wintertime NO<sub><i>y</i></sub>. The severe model overestimate of NO<sub><i>y</i></sub> during this period may
indicate insufficient wet scavenging and/or missing loss on sea-salt
aerosols. Large uncertainties in these processes require further study to
improve simulated NO<sub><i>y</i></sub> partitioning and removal in the
troposphere, but preliminary tests suggest that their overall impact could marginally reduce the model bias in tropospheric OH. During the ATom-1
deployment, OH reactivity (OHR) below 3&thinsp;km is significantly enhanced, and
this is not captured by the sum of its measured components
(cOHR<sub>obs</sub>) or by the model (cOHR<sub>mod</sub>). This enhancement
could suggest missing reactive VOCs but cannot be explained by a
comprehensive simulation of both biotic and abiotic ocean sources of VOCs.
Additional sources of VOC reactivity in this region are difficult to
reconcile with the full suite of ATom measurement constraints. The model
generally reproduces the magnitude and seasonality of cOHR<sub>obs</sub> but
underestimates the contribution of oxygenated VOCs, mainly acetaldehyde,
which is severely underestimated throughout the troposphere despite its
calculated lifetime of less than a day. Missing model acetaldehyde in
previous studies was attributed to measurement uncertainties that have been
largely resolved. Observations of peroxyacetic acid (PAA) provide new support
for remote levels of acetaldehyde. The underestimate in both model
acetaldehyde and PAA is present throughout the year in both hemispheres and
peaks during Northern Hemisphere summer. The addition of ocean sources of
VOCs in the model increases cOHR<sub>mod</sub> by 3&thinsp;% to 9&thinsp;% and
improves model–measurement agreement for acetaldehyde, particularly in winter, but cannot resolve the model summertime bias. Doing so would require
100&thinsp;Tg&thinsp;yr<sup>−1</sup> of a long-lived unknown precursor throughout the year with
significant additional emissions in the Northern Hemisphere summer. Improving
the model bias for remote acetaldehyde and PAA is unlikely to fully resolve
previously reported model global biases in OH and methane lifetime, suggesting that future work should examine the sources and sinks of OH over land.</p></abstract-html>
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