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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-19-3125-2019</article-id><title-group><article-title>A mechanism for biogenic production and emission of MEK from MVK decoupled
from isoprene biosynthesis</article-title><alt-title>A mechanism for biogenic production of MEK</alt-title>
      </title-group><?xmltex \runningtitle{A mechanism for biogenic production of MEK}?><?xmltex \runningauthor{L. Cappellin et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2">
          <name><surname>Cappellin</surname><given-names>Luca</given-names></name>
          <email>luca.cappellin@gmail.com</email>
        <ext-link>https://orcid.org/0000-0001-6740-3638</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3 aff4">
          <name><surname>Loreto</surname><given-names>Francesco</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Biasioli</surname><given-names>Franco</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Pastore</surname><given-names>Paolo</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-1448-0175</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>McKinney</surname><given-names>Karena</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Research and Innovation Centre, Fondazione Edmund Mach, S. Michele a/A 38010, Italy</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Dipartimento di Scienze Chimiche, Università degli Studi di Padova, Padova, Italy</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Consiglio Nazionale delle Ricerche (CNR), Dipartimento di Scienze Bio-Agroalimentari (DISBA), Roma 7-00185, Italy</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Dipartimento di Biologia, Università degli Studi di Napoli Federico II, Napoli, Italy</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Colby College, Waterville, Maine, USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Luca Cappellin (luca.cappellin@gmail.com)</corresp></author-notes><pub-date><day>12</day><month>March</month><year>2019</year></pub-date>
      
      <volume>19</volume>
      <issue>5</issue>
      <fpage>3125</fpage><lpage>3135</lpage>
      <history>
        <date date-type="received"><day>13</day><month>September</month><year>2018</year></date>
           <date date-type="rev-request"><day>14</day><month>November</month><year>2018</year></date>
           <date date-type="rev-recd"><day>7</day><month>February</month><year>2019</year></date>
           <date date-type="accepted"><day>12</day><month>February</month><year>2019</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2019 </copyright-statement>
        <copyright-year>2019</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/.html">This article is available from https://acp.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e144">Methyl ethyl ketone (MEK) is an important compound in atmospheric chemistry.
While attention has been paid mostly to anthropogenic sources of MEK,
recently it has been shown that biogenic sources are globally as important as
anthropogenic ones. However, the origin of biogenic MEK has yet to be
completely elucidated. We present the full mechanism by which within-plant
transformation of methyl vinyl ketone (MVK) and, to a minor extent, of
2-butanol and 3-buten-2-ol, is a source of biogenic MEK. Such transformation
is observed in red oak for both exogenous MVK, taken up from the atmosphere,
and endogenous MVK generated within a plant when it experiences stress (e.g. heat stress).
Endogenous MVK emitted by plants is typically explained by within-plant
oxidation of isoprene caused by oxidative stress. In this study we show that
MVK and MEK emissions caused by heat stress are not related to isoprene in
isoprene-emitting plants, implying that the massive carbon investment that
plants commit to isoprene production is not explained by a direct antioxidant
role. The presented mechanism can be important for inclusion in plant
emission and in plant–atmosphere interaction models.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e154">Isoprene is the major biogenic volatile organic compound (VOC) emitted by
the biosphere into the atmosphere. A wide breadth of research, and
particularly the latest studies employing genetic engineering to produce
transgenic plants with modified isoprene emission, have demonstrated that
isoprene increases plant tolerance to oxidative stresses, caused by factors
such as high temperature and ozone (Behnke
et al., 2007; Loivamäki et al., 2007; Sasaki et al., 2007; Sharkey et
al., 2005; Vickers et al., 2009, 2011). However, the mechanisms by which
isoprene confers resistance against oxidative stresses remain unclear. A
first hypothesis is that isoprene strengthens thylakoid membranes
(Velikova et al., 2011). It has been shown that
under physiological conditions there are less than a hundred isoprene
molecules per million lipid molecules in the membranes
(Harvey et al., 2015), casting doubt on this
mechanism. However, there is evidence that isoprene positively influences
the photosynthetic electron flow, reducing heat dissipation mechanisms and
stabilizing thylakoid membranes, especially under stressful environments
(Pollastri et al., 2014; Velikova et al., 2011). Recently, it has been shown that isoprene may act as a signaling
molecule, inducing up-regulation of phenylpropanoid biosynthetic genes,
indirectly enhancing plant resistance to heat and light stress
(Harvey and Sharkey, 2016). Alternatively, isoprene may
simply act as a proxy of induced activation of secondary metabolism
(Tattini et al., 2015). A last hypothesis is that
isoprene scavenges reactive oxygen species (ROS) by direct or indirect
reaction (Loreto and Velikova, 2001). ROS exert an important
signaling role in plants  (Mittler et al., 2011) but
can be generated in high amounts upon abiotic stresses, leading to cell
damage and programmed cell death  (Delledonne et al., 2001).
Isoprene biosynthesis has been ascribed a ROS quenching effect, but,<?pagebreak page3126?> again,
isoprene concentration in the leaf may be too low; abundant lipids and
carotenoids can react with ROS much more rapidly than isoprene
(Harvey et al., 2015). Nevertheless, emission of
putative isoprene oxidation products that may be formed upon isoprene
reaction with ROS has been reported, e.g. in a tropical rainforest mesocosm
(Jardine et al., 2012), mango trees (Jardine et al., 2012, 2013), and creosote bush (Jardine et al., 2010).
The putative isoprene oxidation products, the carbonyls methyl vinyl ketone
(MVK) and methacrolein (MACR), are cytotoxic and must be rapidly removed
from leaves once formed (Oikawa and Lerdau, 2013;
Vollenweider et al., 2000). Plants also rapidly take up MACR and MVK (Andreae
et al., 2002; Karl et al., 2004, 2005, 2010), suggesting that these
compounds may be metabolized. Detoxification mechanisms for MACR have been
reported  (Muramoto et al., 2015),
whereas this is not the case for MVK.</p>
      <p id="d1e157">Methyl ethyl ketone (MEK) is an important oxygenated volatile organic
compound (OVOC) for the atmosphere. In several studies the MEK concentration
in the free troposphere has been reported to be approximately 25 % of the
concentration of acetone (Moore et al., 2012; Singh et al., 2004). However,
MEK has a much shorter lifetime than acetone due to a much higher reactivity
(by about 1 order of magnitude) with hydroxyl radical (OH, <inline-formula><mml:math id="M1" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.15</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> cm<inline-formula><mml:math id="M2" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M3" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> at 296 K; Chew and Atkinson,
1996), which makes it important to total OH reactivity (Nölscher et al.,
2016). Both biogenic and anthropogenic sources contribute to global
atmospheric MEK
(Yáñez-Serrano et al., 2016). In urban environments, MEK is typically the most abundant
ketone after acetone (Feng et al., 2005; Grosjean et al., 1996), as it is
widely produced in industrial processes (Legreid et al., 2007; Sin et al.,
2001). The regional background of MEK was once attributed to anthropogenic
sources only. More recent findings suggest that the biogenic source of MEK is
comparable to the anthropogenic source (Yáñez-Serrano et al., 2015,
2016), but the origin of biogenic MEK has not been fully elucidated so far.
Direct emission of MEK from vegetation seems to be the largest contribution
since only a few minor biogenic VOCs (e.g, n-butane and 2-butanol) can lead
to MEK via atmospheric oxidation (de Gouw et al., 2003; Jenkin et al., 1997;
Singh et al., 2004; Sommariva et al., 2011). We recently found a possible
relation between the detoxification by vegetation of MVK and the biogenic
emission of MEK (Cappellin et al., 2017). We suggested that MVK could be
efficiently detoxified by reduction reactions which lead mostly to MEK and to
a minor extent to 2-butanol, though the full interconversion scheme was not
studied.</p>
      <p id="d1e207">In this study we explore the links between the production of isoprene from
photosynthetic carbon, within-plant isoprene oxidation, and the biogenic
emission of putative isoprene oxidation products MVK, MEK, and 2-butanol. We
performed a series of fumigation experiments in which leaves were exposed to
exogenous levels of a single carbonyl, and investigated the relationships
between the uptake of each compound and the release of related products. We
then studied the emission of carbonyls by leaves under progressively higher
temperature conditions that likely inhibit photosynthesis and increase
isoprene biosynthesis and the oxidative environment within leaves. We
finally explored whether MVK, MEK, and 2-butanol produced under heat stress
are products of in-plant isoprene oxidation by determining whether they
share a labelling pattern with isoprene when leaves are fed <inline-formula><mml:math id="M4" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.
Different labelling patterns would indicate that emitted carbonyls are not
isoprene oxidation products, and would cast doubt on the hypothesis that
isoprene acts as an antioxidant by reacting with ROS inside leaves.</p>
</sec>
<sec id="Ch1.S2">
  <title>Results</title>
<sec id="Ch1.S2.SS1">
  <title>Fumigation of leaves with OVOCs</title>
      <p id="d1e236">Individual plants were fumigated
with MVK, MEK, 2-butanol, 3-buten-e-ol, or MACR, as described in the
Materials and methods and Fig. 1. Both MVK and MACR were efficiently taken
up by the fumigated leaves but, while MVK was continuously transformed into
other volatile products that were subsequently released (Fig. 1a), in the
case of MACR only a transient release of other volatiles was observed
(Fig. 1e). MVK reduction generated either MEK or 3-buten-2-ol, depending
on whether the alkene moiety or the carbonyl moiety of MVK is reduced.
Further reduction reactions converted MEK and 3-buten-2-ol into 2-butanol
(see also Fig. 1b and d). Conversion of 3-buten-2-ol to MEK is also
possible (Fig. 1d). The release of MEK, 3-buten-2-ol, and 2-butanol
corresponded to <inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mn mathvariant="normal">97</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula> % (<inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:mtext>mean</mml:mtext><mml:mo>±</mml:mo><mml:mtext>SD</mml:mtext></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula>) of the total MVK
uptake (Table S1 in the Supplement). Compound identification is corroborated
by corollary GC-MS experiments (Fig. S1). In the MEK fumigation
experiments (Fig. 1b), the release of 2-butanol corresponded to <inline-formula><mml:math id="M8" display="inline"><mml:mrow><mml:mn mathvariant="normal">87</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">22</mml:mn></mml:mrow></mml:math></inline-formula> % of the total uptake of MEK. Remarkably, 2-butanol and 3-buten-2-ol
may also convert into MEK (Fig. 1c, d). In the 2-butanol fumigation
experiments (Fig. 1c), the release of MEK corresponded to <inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:mn mathvariant="normal">90</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula> %
of the total uptake of 2-butanol. In the 3-buten-2-ol fumigation
experiments (Fig. 1d), the release of MEK and 2-butanol corresponded to <inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:mn mathvariant="normal">56</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">18</mml:mn></mml:mrow></mml:math></inline-formula> % and <inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:mn mathvariant="normal">22</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula> % of the total uptake of 3-buten-2-ol,
respectively. Finally, in the MACR fumigation experiment (Fig. 1e) we
observed a small transient release of isobutyraldehyde, in an amount
accounting for <inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.5</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.3</mml:mn></mml:mrow></mml:math></inline-formula> % of the MACR taken up, and, to a lesser
extent, of 2-methallyl alcohol (<inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.7</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> %) and isobutanol (<inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.1</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> %). The total emission of these three compounds corresponded
to <inline-formula><mml:math id="M15" display="inline"><mml:mrow><mml:mn mathvariant="normal">9.3</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.4</mml:mn></mml:mrow></mml:math></inline-formula> % of the total MACR taken up.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><label>Figure 1</label><caption><p id="d1e374">Uptake of MVK <bold>(a)</bold>, MEK <bold>(b)</bold>, 2-butanol <bold>(c)</bold>,
3-buten-e-ol <bold>(d)</bold> and MACR <bold>(e)</bold> and
emission of their oxidized or reduced products in red oak leaves. Results
are reported as mean <inline-formula><mml:math id="M16" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> standard deviation (<inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula>). Negative values
denote the uptake and positive values the emission of volatiles. Black
arrows indicate the beginning and the end of the fumigation. In <bold>(b)</bold>,
the pulses of MEK uptake at the beginning of the fumigation and of MEK
release after the end of the fumigation correspond to formation and release,
respectively, of a MEK pool dissolved into the leaf water. At equilibrium
the uptake of MEK and subsequent release of 2-butanol is constant and
indicates a constant rate of MEK transformation within leaves. Analogous
considerations can be made for 2-butanol and 3-buten-2-ol in <bold>(c)</bold> and
<bold>(d)</bold>, respectively.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/3125/2019/acp-19-3125-2019-f01.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS2">
  <title>Emission of isoprene and OVOCs under heat stress</title>
      <?pagebreak page3127?><p id="d1e433">Emissions from darkened, unstressed leaves were measured (Fig. 2a). As expected
(Loreto and Sharkey, 1990), a very small basal
emission of isoprene (<inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.015</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.004</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M19" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M20" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
<inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mtext>mean</mml:mtext><mml:mo>±</mml:mo><mml:mtext>se</mml:mtext></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M22" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula>) was found. In these leaves the emissions of putative
isoprene oxidation products (MVK <inline-formula><mml:math id="M23" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M24" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH, Fig. 2b) and their
reduction products (MEK and 2-butanol; Figure 2c and d, respectively) were
near background level, and dark respiration was low (<inline-formula><mml:math id="M25" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.49</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.07</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M26" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>mol m<inline-formula><mml:math id="M27" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M28" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, Fig. 2e). When darkened red oak leaves were exposed
to mild heat stress (35 <inline-formula><mml:math id="M29" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for 2 h) a small but statistically
significant increase in isoprene emission to <inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.034</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.007</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M31" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M32" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
was observed. Emission of MVK <inline-formula><mml:math id="M33" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M34" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH was
detected at a level of <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.002</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.001</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M36" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M37" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, and
emissions of further transformation products of MVK were also detected,
namely MEK (<inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.005</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.001</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M39" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and 2-butanol
(<inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.007</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.001</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M42" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. However, only the increase in
2-butanol was statistically significant compared to unstressed leaves. Dark
respiration also increased to <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.8</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M45" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>mol m<inline-formula><mml:math id="M46" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M47" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.
More severe heat stress was then imposed, maintaining the darkened leaves at
45 <inline-formula><mml:math id="M48" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for 2 h. This led to a further significant increase in
isoprene emission (<inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.08</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.01</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M50" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> (Fig. 2a).
Emission of MVK <inline-formula><mml:math id="M52" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M53" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH also increased to <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.006</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.001</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M55" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M56" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Fig. 2b), and emission of MEK and 2-butanol increased to
<inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.029</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.007</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M58" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M59" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and <inline-formula><mml:math id="M60" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.033</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.007</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M61" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M62" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
respectively (Fig. 2c, d). Dark respiration also
increased to <inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.1</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M64" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>mol m<inline-formula><mml:math id="M65" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M66" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Fig. 2e). All these
changes were statistically significant with respect to the values measured
at 25 <inline-formula><mml:math id="M67" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. After a recovery phase of 2 h at room temperature
(25 <inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C), pre-stress emissions were again found for all compounds
(Fig. 2a–e).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><label>Figure 2</label><caption><p id="d1e1013">Left: net flux of isoprene <bold>(a)</bold>, MVK <inline-formula><mml:math id="M69" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M70" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH <bold>(b)</bold>,
products from MVK reduction (MEK, <bold>c</bold>, and 2-butanol, <bold>d</bold>) and respiration <bold>(e)</bold>
upon exposure to moderate (35 <inline-formula><mml:math id="M71" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) or severe (45 <inline-formula><mml:math id="M72" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) heat
stress, and recovery to 25 <inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C by red oak plants in the dark. The
compound grouping is based on PTR-ToF-MS in <inline-formula><mml:math id="M74" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode. Results are
reported as mean <inline-formula><mml:math id="M75" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> standard error (<inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula>). Asterisks indicate
significant differences (Kruskal–Wallis, <inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula>) compared to the
unstressed (25 <inline-formula><mml:math id="M78" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) case. Right: emission of isoprene <bold>(f)</bold>,
MVK <inline-formula><mml:math id="M79" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M80" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH <bold>(g)</bold>, products from MVK reduction (MEK, <bold>h</bold>, and
2-butanol, <bold>i</bold>), and photosynthesis <bold>(j)</bold> upon exposure to moderate (35 <inline-formula><mml:math id="M81" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) or
severe (45 <inline-formula><mml:math id="M82" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) heat stress, and recovery to 25 <inline-formula><mml:math id="M83" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C in red
oak plants in the light (ca. 90 <inline-formula><mml:math id="M84" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>mol m<inline-formula><mml:math id="M85" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M86" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> light
intensity). The compound grouping is based on PTR-ToF-MS in <inline-formula><mml:math id="M87" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>
mode. Results are reported as mean <inline-formula><mml:math id="M88" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> standard error (<inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula>). Asterisks
indicate significant differences (Kruskal–Wallis, <inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula>) compared
to the unstressed (25 <inline-formula><mml:math id="M91" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) control.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/3125/2019/acp-19-3125-2019-f02.png"/>

        </fig>

      <p id="d1e1283">The same experiment was repeated on illuminated red oak leaves (Fig. 2f–j).
Non-stressed leaves (maintained at 25 <inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) photosynthesized at a
rate of <inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.2</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M94" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>mol <inline-formula><mml:math id="M95" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> m<inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Fig. 2j) and
emitted isoprene at a rate of <inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.7</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M99" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M100" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Fig. 3f).
These values for carbon assimilation and isoprene emission are
consistent literature findings, considering the light intensity to which
plants were exposed (e.g. see Loreto and Sharkey, 1990). In non-stressed leaves, the emission of
MVK <inline-formula><mml:math id="M101" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M102" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH was below the detection limit (Fig. 2g) and the
emissions of MEK and 2-butanol were also close to background (Fig. 2h, i).
Exposure to 35 <inline-formula><mml:math id="M103" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for 2 h led to a non-significant decrease in
photosynthesis (Fig. 2j) and to a large increase in isoprene emission,
reaching <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:mn mathvariant="normal">10.8</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.3</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M105" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M106" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Fig. 2f). Detectable
emission rates of MVK <inline-formula><mml:math id="M107" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M108" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH were present (Fig. 2g), and MEK and
2-butanol emissions were also detectable (Fig. 2h, i). However, the change
in emissions compared to that observed at 25 <inline-formula><mml:math id="M109" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C was statistically
significant only for 2-butanol. Severe stress (45 <inline-formula><mml:math id="M110" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for 2 h)
caused a reduction in the emission of isoprene as compared to the maximum
emission observed at 35 <inline-formula><mml:math id="M111" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Fig. 2f), and photosynthesis was also
inhibited (Fig. 2j). However, the emission of MVK <inline-formula><mml:math id="M112" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M113" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH increased
to <inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.006</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.002</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M115" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M116" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Fig. 2g), and MEK and
2-butanol increased to <inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.026</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.004</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M118" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M119" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and
<inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.025</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.005</mml:mn></mml:mrow></mml:math></inline-formula> nmol m<inline-formula><mml:math id="M121" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M122" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively (Fig. 2h, i). After
recovering for 2 h at room temperature (25 <inline-formula><mml:math id="M123" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C), VOC emissions and
photosynthetic rate were similar to those of pre-stressed leaves (Fig. 2f–j).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><label>Figure 3</label><caption><p id="d1e1625">Labelling of isoprene emitted by red oak leaves upon
<inline-formula><mml:math id="M124" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>-feeding in the air. Fully labelled <inline-formula><mml:math id="M125" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is constantly
supplied to the plants starting from time <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mi>T</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> min.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/3125/2019/acp-19-3125-2019-f03.png"/>

        </fig>

</sec>
<?pagebreak page3128?><sec id="Ch1.S2.SS3">
  <?xmltex \opttitle{{$\protect\chem{{}^{{13}}C}$} labelling of isoprene and OVOCs}?><title><inline-formula><mml:math id="M127" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> labelling of isoprene and OVOCs</title>
      <p id="d1e1694">To provide better insights into isoprene production and possible within-leaf oxidation
under severe heat stress, plants were exposed to isotopically labelled
<inline-formula><mml:math id="M128" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> at 45 <inline-formula><mml:math id="M129" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. <inline-formula><mml:math id="M130" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> labelling of isoprene was clearly
visible. All <inline-formula><mml:math id="M131" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-labelled isoprene isotopomers (<inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">70</mml:mn></mml:mrow></mml:math></inline-formula>–74) appeared, and
the unlabelled isoprene (<inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">69</mml:mn></mml:mrow></mml:math></inline-formula>) declined rapidly (Fig. 3). After 20 min of
<inline-formula><mml:math id="M134" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> labelling, the percentage of labelled isoprene was above
80 %, and a stable labelled fraction of <inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:mn mathvariant="normal">95</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> % of the emitted
isoprene was reached ca. 40 min after starting the <inline-formula><mml:math id="M136" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
fumigation (Fig. 4a). However, MVK <inline-formula><mml:math id="M137" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M138" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH, MEK, and 2-butanol were
not labelled by <inline-formula><mml:math id="M139" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>. Even after 2 h of <inline-formula><mml:math id="M140" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> labelling, the
isotopic ratios of MVK <inline-formula><mml:math id="M141" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M142" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH (Fig. 4b) and those of MEK and
2-butanol (Fig. 4c, d) remained at their natural abundance levels.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><label>Figure 4</label><caption><p id="d1e1874">Emission of isoprene <bold>(a)</bold>, MVK <inline-formula><mml:math id="M143" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M144" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH <bold>(b)</bold>, MEK
<bold>(c)</bold>, and 2-butanol <bold>(d)</bold> in red oak plants heat stressed at 45 <inline-formula><mml:math id="M145" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C
for 2 h in the light, under <inline-formula><mml:math id="M146" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">12</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M147" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
atmosphere. Dashed horizontal lines represent natural abundances of isotopic
compounds.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/3125/2019/acp-19-3125-2019-f04.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S3">
  <title>Discussion</title>
      <p id="d1e1956">There are consistent indications that MEK is released
by vegetation at the leaf-, canopy-, and ecosystem-scale and that biogenic
sources influence global atmospheric concentrations of MEK (Yáñez-Serrano
et al., 2016, and references therein). However, no mechanism for biogenic
MEK production has been demonstrated previously. It has been hypothesized
that MEK could be generated following similar pathways to acetone, as a
by-product of cyanogenesis in the transformation of a cyanohydrin lyase
(Yáñez-Serrano et al., 2016). This idea has not been proven and emission would be limited
to cyanogenic plants. Plant uptake of atmospheric MVK
is a well-established phenomenon  (Karl et al., 2010) and bidirectional exchange of MVK has been sometimes reported
(Karl et al., 2005). Emissions of MVK and MEK have been rarely measured at leaf level and are
challenging to measure because (i) emissions are small, especially in the
case of MVK; (ii) separation of leaf and atmospheric sources in the presence
of high isoprene emissions is difficult. Jardine et al. (2012, 2013) reported emissions of MACR and MVK in isoprene-emitting trees. They attributed carbonyl emissions to within-leaf isoprene
oxidation, possibly by ROS induced under environmental stress conditions
(e.g. heat stress).</p>
      <p id="d1e1959">Our results confirm the emission of carbonyls and show that the reduction of several
carbonyls may occur in plants. In particular, we show that reduction
reactions transform MVK into MEK, 3-buten-2-ol, and 2-butanol, and that<?pagebreak page3129?> the
conversion of MEK into 2-butanol occurs in both directions (Fig. 5). This
mechanism is the first possible pathway for the biogenic production and
emission of MEK. The results also suggest that within-plant isoprene
oxidation is not the source of these VOCs in our experiments.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><label>Figure 5</label><caption><p id="d1e1964">Schematics of MVK, MEK, 3-buten-2-ol, and 2 butanol
origin and interconversion in leaves, as suggested by this study. The uptake
of MEK, 3-buten-2-ol, and 2-butanol has not been reported so far but it is in principle possible given the
present results.</p></caption>
        <?xmltex \igopts{width=384.112205pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/3125/2019/acp-19-3125-2019-f05.png"/>

      </fig>

      <p id="d1e1973">Our fumigation experiments establish a causal link between-plant metabolisms
of MVK and MEK production. Reaction yield calculations were performed
considering the net total amount of MVK taken up during the experiment and
the net total amount of MEK released. We show that <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:mn mathvariant="normal">73</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> % of the
MVK taken up by leaves was converted into MEK. Most of the remaining MVK was
converted into 3-buten-2-ol and 2-butanol. Thus <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:mn mathvariant="normal">97</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula> % of MVK
uptake was re-emitted as other volatile products. These data confirm
previous reports at Harvard Forest, corroborated by laboratory experiments,
where a correlation between uptake of MVK and emission of MEK, 2-butanol, and
3-buten-2-ol was found (Cappellin et al., 2017).
The implication is that the metabolism of MVK is a likely source of MEK
emissions.</p>
      <p id="d1e2001">Whether other mechanisms for MEK production by plants exist remains an open
question. Processes on the leaf surface such as MVK adsorption or
metabolization by leaf surface bacteria have been shown to be of minor
importance in previous investigations of ketone and aldehyde leaf uptake (Omasa
et al., 2000; Tani et al., 2010, 2013; Tani and Hewitt, 2009, p. 20). Future
studies should investigate the fraction of global biogenic MEK emissions
that could be accounted for by the proposed production mechanism.</p>
      <p id="d1e2004">Rapid transformation of MVK by secondary reactions can be interpreted as a
necessary and efficient detoxification mechanism. MVK toxic effects include
the accumulation of hydrogen peroxide and the activation of some
stress-responsive genes (Alméras et
al., 2003; Vollenweider et al., 2000). MVK metabolism has been reported in
several plants (Karl et al., 2010; Tani et al., 2010). It has also been demonstrated that various
plant cells are able to reduce unsaturated ketones (Kergomard et al., 1988). Long-term fumigation experiments
with houseplants (Tani and Hewitt, 2009) have
established that the uptake of several aldehydes and ketones exceeded by
orders of magnitude the amount dissolved in leaf water, thus implying their
metabolization as well. Transformation of MVK into MEK may be especially
important in stressed plants as oxidative stress increases and endogenous
production of MVK occurs  (Jardine et al., 2012). The fumigation experiments suggest that the process can occur for
exogenous MVK as well. Hence, the reduction mechanism also provides an
explanation for plant uptake of MVK, a cytotoxic compound, which has been
observed in many studies (e.g. Brilli et al., 2016; Karl et al., 2005, 2010).</p>
      <p id="d1e2007">MACR was also efficiently metabolized, consistent with other literature
reports on tomato plants (Muramoto et
al., 2015). In this case, however, detected volatiles produced by MACR
reduction represented only about 9 % of the MACR uptake. By analogy with
the case of MVK, the expected reduction products of MACR would be
isobutyraldehyde, 2-methylprop-2-en-1-ol, and isobutyl alcohol. However,
only a transient release of such products was detected. Isobutyraldehyde
emission accounted for 6.5 % of the MACR uptake within 2 h,
confirming results from a previous study on tomato plants (6.4 %; Muramoto et al., 2015).
Muramoto et al. (2015) reported that
most MACR in the leaf undergoes glutathionylation. Therefore, no MACR
volatile products are released. Our results are in line with this
interpretation, as MACR uptake implies a sink within leaves, suggesting a
continuous metabolization of the compound, but the metabolic products are
not released as volatiles.</p>
      <p id="d1e2010">The foliar uptake of MVK and MACR was rapid and sustained throughout the
entire fumigation period, suggesting a large and fast metabolic sink. On the
other hand, the uptake of secondary transformation products (namely MEK,
3-buten-2-ol, and 2-butanol) was not sustained, indicating that the
metabolic sink was smaller and insufficient to rapidly scavenge the
metabolites, leading to their temporary accumulation within leaves. Upon
ending the fumigation, accumulated MEK, 3-buten-2-ol, and 2-butanol were
released from the leaves back to the atmosphere (Fig. 2b, c, d).</p>
      <?pagebreak page3130?><p id="d1e2013">A further aim of this study was to verify whether carbonyls emitted by
plants come from isoprene oxidation in plants, as elsewhere proposed
(Jardine et al., 2012). The experiments
were conducted on red oak, one of the strongest isoprene-emitting plant
species  (Loreto and Sharkey, 1990). As isoprene
biosynthesis is light- and temperature-dependent
(Loreto and Sharkey, 1990), an increase in
isoprene transformation products would be expected when leaves are
illuminated and exposed to moderately high temperatures. This behaviour was
indeed represented in the present data (Fig. 2). Under heat stress,
photosynthesis and isoprene emission generally decouple and carbon sources
other than direct products of photosynthetic carbon fixation are used for
isoprene biosynthesis  (Brilli et al., 2007). When leaves
were severely heat-stressed we did not observe the expected uncoupling
between photosynthesis and isoprene emission, as both parameters decreased.
However, MVK <inline-formula><mml:math id="M150" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M151" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH, MEK, and 2-butanol increased. This increase
would be predicted to occur under an increasingly oxidative environment
where molecular <inline-formula><mml:math id="M152" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is directly photoreduced instead of being used for
photosynthetic electron transport. Interestingly, the amount of
MVK <inline-formula><mml:math id="M153" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> MACR <inline-formula><mml:math id="M154" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> ISOPOOH, MEK, and 2-butanol was similarly enhanced in
illuminated and darkened leaves under the effect of high temperatures,
despite the fact that no photosynthesis and minimal isoprene emission was
present in darkness.</p>
      <p id="d1e2055">This unexpected observation was followed up with measurements of
<inline-formula><mml:math id="M155" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> labelling to further characterize the carbon source of MVK, MEK, and
2-butanol. As photosynthetic metabolites and isoprene label very quickly and
almost totally when exposed to a <inline-formula><mml:math id="M156" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> atmosphere
(Delwiche and Sharkey, 1993; see also Figs. 3, 4), we would
expect that putative isoprene oxidation products and their further
transformation products would be quickly and totally labelled as well. On the
other hand, if carbon sources other than direct photosynthetic metabolites
(including isoprene) are used for their biosynthesis, these compounds would
not be labelled. The observation that no <inline-formula><mml:math id="M157" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> labelling appeared in any of
the emitted carbonyls suggests that isoprene is not involved in their
biosynthesis. We are not aware of isoprene pools that label slowly in plants
(Niinemets et al., 2004). However, sources independent of
freshly assimilated carbon contribute to isoprene production when
photosynthesis is stress-constrained  (Brilli et al., 2007).
Photorespiratory carbon may contribute to isoprene production, especially
during dynamic changes of environmental conditions
(Jardine et al., 2014). However,
photorespiration also labels quite rapidly with <inline-formula><mml:math id="M158" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
(Delfine et al., 1999), and <inline-formula><mml:math id="M159" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> would appear in MVK and MEK
skeletons if contributed by photorespiratory carbon.</p>
      <p id="d1e2125">Isoprene labelling experiments using <inline-formula><mml:math id="M160" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-enriched glucose under
<inline-formula><mml:math id="M161" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>-free air conditions have provided a clear indication that isoprene
may also incorporate carbon via the glycolytic pathway (Affek and Yakir, 2003), and possibly also
by re-fixation of respiratory <inline-formula><mml:math id="M162" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (Loreto,
2004; Loreto et al., 2007). This alternative carbon source can become
prevalent when photosynthesis is stress-inhibited  (Brilli
et al., 2007), and may sustain small yet measurable emissions of isoprene in
<inline-formula><mml:math id="M163" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>-free air  (Affek and Yakir,
2002) or in<?pagebreak page3131?> detached leaves with no photosynthetic activity (Brilli
et al., 2011; Harrison et al., 2013; Loreto and Schnitzler, 2010). However,
under the conditions used here photosynthesis was never dramatically
impaired and isoprene emission was labelled completely, even under heat
stress. We conclude that the emitted carbonyls are not isoprene oxidation
products but derive from a different metabolism. It should be noted,
however, that in nature, under high UV radiation, the emission of isoprene
is generally far larger than that found in our experiment, and the oxidation
potential of the atmosphere is also greater. Thus, we cannot completely rule
out that isoprene also oxidizes forming carbonyls, namely MVK and MACR, in
nature. If not isoprene, then what is the source of the emitted carbonyls in
plants? MVK and MACR are peroxidation products of the trienoic fatty acid
contained in chloroplast membranes (Alméras et al., 2003; Kai et
al., 2012), and cause cytotoxicity once formed in leaves. MVK is also a
component of flower scent  (Knudsen et al., 1993) and may be a
lipid peroxidation product, activating the expression of stress-related
genes in <italic>Arabidopsis</italic>  (Vollenweider et al.,
2000). As we have demonstrated that isoprene is not responsible for the
production of MVK and its transformation products in plants, further
research should concentrate on investigating the relationships between
emitted carbonyls and lipid catabolism in cellular membranes.</p>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <title>Materials and methods</title>
<sec id="Ch1.S4.SS1">
  <title>Plant material and experimental design</title>
      <p id="d1e2187">Experiments were performed on 2-year-old red oaks (<italic>Quercus rubra</italic>)
obtained from a local nursery (Malleier, Lana, Italy). A total of 40 plants
were placed in 5 L polypropylene pots (Plastecnic, Perego, Italy), using
TerraBrill<sup>®</sup> peat moss (Agrochimica, Bolzano,
Italy). Prior to the experiments, plants were grown for 60 days in a
greenhouse under a 14 h photoperiod with a light <inline-formula><mml:math id="M164" display="inline"><mml:mo>:</mml:mo></mml:math></inline-formula> dark temperature
regime of <inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:mn mathvariant="normal">24.0</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">19.0</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M166" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:mn mathvariant="normal">60</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> % relative humidity, and
ca. 90 <inline-formula><mml:math id="M168" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>mol m<inline-formula><mml:math id="M169" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M170" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> light intensity. Plants were
watered every 3 days and developed fully expanded leaves after 5 weeks. A
total of 4 days prior to the experiments, plants were transferred from the
growth chamber into a climate cabinet (Climacell 707, BMT Medical Technology,
Brno, Czech Republic). The climatic cabinet was employed to maintain constant
climatic conditions (fumigation experiments) or to apply heat stress while
maintaining all other parameters constant (heat stress experiments). The
early transfer allowed plant recovery from accidental mechanical injures and
adaptation to the new environment. The climate cabinet was set with the same
parameters as the greenhouse, but at a constant temperature of 25 <inline-formula><mml:math id="M171" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C
(except for heat stress experiments), and interfaced with the proton transfer reaction time-of-flight mass spectrometry (PTR-ToF-MS) via
polyetheretherketone (PEEK) capillary tubes (ca. 1.5 m
length <inline-formula><mml:math id="M172" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 1.01 mm ID; temperature: 110 <inline-formula><mml:math id="M173" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (part outside
the climatic chamber, ca. 1 m), flow: 40 sccm).</p>
      <p id="d1e2295">One day prior to the start of the experiments, a shoot portion of each plant
was enclosed within a Teflon (perfluoroalkoxy; PFA) bag and three capillary
tubes were attached to each shoot to be monitored. The three tubes included
the following: a PFA tube providing a constant flow of humidified zero air
(eventually including fumigation VOCs during fumigation experiments) to the
VOC bag, a second PFA tube removing the overflow air, and a PEEK capillary
tube sampling the VOC-bag air into the PTR-ToF-MS. As negative control,
volatiles were monitored in parallel on an empty VOC bag connected to the
PTR-ToF-MS with the same tubing system described above.</p>
      <p id="d1e2298">Fumigation experiments were performed on three independent plants and on the
empty VOC bag as a negative control. New plants were used for every
fumigation. Pure liquid standards of each chemical were purchased from
Sigma-Aldridge and diluted with Milli-Q water. A Liquid Calibration Unit
(Ionicon Analytik GmbH, Innsbruck, Austria) was employed to continuously
nebulize 10 <inline-formula><mml:math id="M174" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>L min<inline-formula><mml:math id="M175" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> of the diluted standard into 1 L min<inline-formula><mml:math id="M176" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
of synthetic air generated from a cylinder (Aria Medicinale F.U., Rivoira)
made by 80 % <inline-formula><mml:math id="M177" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, 20 % <inline-formula><mml:math id="M178" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, and 400 ppm <inline-formula><mml:math id="M179" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. The volume
mixing ratio of the compound used for the fumigation in the VOC-bag inlets
was the following: 290 ppbv for MVK, 330 ppbv for MEK, 90 ppbv for
2-butanol, 96 ppbv for 3-buten-2-ol, 140 ppbv for MACR. Fluxes were
controlled using mass flow controllers (MKS Instruments, Deutschland GmbH).
Water vapour was added to the air stream by constantly nebulizing water via
a Liquid Calibration Unit (Ionicon Analytik GmbH, Innsbruck, Austria) to
reach a RH of 60 %.</p>
      <p id="d1e2367">Fumigation experiments were performed separately for each chemical using
fresh plants from the greenhouse. Gas flow measurements in the PFA tubes
providing the fumigation gas mixture were conducted using a flow meter at the
beginning and at the end of each experiment (Defender 530, DryCal Technology,
MesaLabs) and was ca. 250 sccm for each VOC bag. Leaf area enclosed in the
bag was measured using open-source software (ImageJ, available at
<uri>http://imagej.net/Welcome</uri>, last access: 31 July 2018). VOC uptake or
release by the plants was calculated as the difference between VOC
concentrations in the plant VOC bag and in the empty VOC bag. Results were
normalized by the total leaf area enclosed in the bag, and by the incoming
air flows.</p>
      <p id="d1e2374">Heat stress experiments were conducted using a similar set-up to the
fumigation experiments. After acclimation for 4 days, during the day of
the experiment, basal emissions at 25 <inline-formula><mml:math id="M180" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C were measured for 2 h before raising the temperature to 35 <inline-formula><mml:math id="M181" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (mild stress) and
subsequently to 45 <inline-formula><mml:math id="M182" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (severe stress). Each temperature was
maintained for 2 h. Measurements were continued during the recovery
phase at 25 <inline-formula><mml:math id="M183" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for a further 2 h. Transitions between different
temperatures required a 15 min ramp.</p>
      <?pagebreak page3132?><p id="d1e2413">Experiments using labelled <inline-formula><mml:math id="M184" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> were performed as follows. A 1 L cylinder of
<inline-formula><mml:math id="M185" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-labelled <inline-formula><mml:math id="M186" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was purchased from Sigma-Aldrich
(99 atom % <inline-formula><mml:math id="M187" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula> purity). The heat stress experiment at
45 <inline-formula><mml:math id="M188" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C described above was repeated by switching the <inline-formula><mml:math id="M189" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in
the air stream from unlabelled <inline-formula><mml:math id="M190" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M191" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-labelled
<inline-formula><mml:math id="M192" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. The labelling was triggered when the signals for isoprene and
isoprene primary and secondary oxidation products became stable after the
temperature change, i.e. about 1 h after the onset of the stress. The
temperature was kept constant at 45 <inline-formula><mml:math id="M193" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C while feeding
<inline-formula><mml:math id="M194" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-labelled <inline-formula><mml:math id="M195" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. Results were compared to analogous
experiments employing unlabelled <inline-formula><mml:math id="M196" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <title>Gas analysis</title>
      <p id="d1e2571">Trace gas analysis performed via a PTR/SRI-ToF-MS 8000 (Ionicon Analytik
GmbH, Innsbruck, Austria). PEEK capillary tubes directly sampled the air
mixture from each VOC bag to the instrument inlet. A valve system allowed
switching between the enclosures every 2 min. The PTR/SRI-ToF-MS was
equipped with a switchable reagent ion system (Jordan et
al., 2009), allowing either <inline-formula><mml:math id="M197" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M198" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> to be selected as
the primary ion. Measurements were generally taken using <inline-formula><mml:math id="M199" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> ion
chemistry, while for the fumigation experiments measurements were taken in
both modes in order to strengthen compound identification. Calibrations with
pure standards (purchased from Sigma-Aldrich) were carried out for all
measured compounds using a Liquid Calibration Unit (Ionicon Analytik GmbH,
Innsbruck Austria). For isoprene, the calibration was performed using a
standard gas cylinder (Scott Specialty Gases/Air Liquide) containing
isoprene (<inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:mn mathvariant="normal">80.0</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> % ppm). The isoprene signal was monitored on the ion
peaks, corresponding to proton transfer reactions leading to
<inline-formula><mml:math id="M201" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">5</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">9</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M202" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode and <inline-formula><mml:math id="M203" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">5</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">8</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>,
corresponding to charge transfer reactions, for <inline-formula><mml:math id="M204" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode
(Karl et al., 2012). The peaks corresponding to the
isotopologues were used to monitor the isotopic labelling. Such peaks were
<inline-formula><mml:math id="M205" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CC</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">9</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M206" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">9</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M207" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">9</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M208" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">9</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, and
<inline-formula><mml:math id="M209" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">5</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">9</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M210" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode and
<inline-formula><mml:math id="M211" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CC</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">8</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M212" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">8</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M213" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">8</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M214" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">8</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, and
<inline-formula><mml:math id="M215" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">5</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">8</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M216" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode. Ketones undergo proton
transfer reactions in <inline-formula><mml:math id="M217" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode and three body association
reactions in <inline-formula><mml:math id="M218" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode. This was the case for MVK and MEK, leading
to the ion signals <inline-formula><mml:math id="M219" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">7</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M220" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">9</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>,
respectively, in <inline-formula><mml:math id="M221" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode and
<inline-formula><mml:math id="M222" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M223" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M224" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M225" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">8</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M226" display="inline"><mml:mo>⋅</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M227" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, respectively, in <inline-formula><mml:math id="M228" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>
mode. Aldehydes react at collision rates via proton transfer in
<inline-formula><mml:math id="M229" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode and mainly hydride ion transfer in <inline-formula><mml:math id="M230" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>. In
<inline-formula><mml:math id="M231" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode aldehydes also undergo three body association reactions at a
much reduced rate (Liu et al., 2013). This is the case of MACR and
isobutyraldehyde, mostly leading to the ion signals <inline-formula><mml:math id="M232" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">7</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M233" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">9</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, respectively, in <inline-formula><mml:math id="M234" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode and
<inline-formula><mml:math id="M235" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">5</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M236" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">7</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, respectively, in
<inline-formula><mml:math id="M237" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode. Alcohols typically undergo proton transfer followed by
dehydration in <inline-formula><mml:math id="M238" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode and hydride ion transfer in <inline-formula><mml:math id="M239" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>
mode. Details on the spectral peaks used to monitor each compound in red oak
are reported in the Table S2. Isotopic labelling was monitored using the
signal corresponding to isotopologues analogously to the case of isoprene.
Photosynthesis and dark respiration were measured as <inline-formula><mml:math id="M240" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> exchange.
The exchange of <inline-formula><mml:math id="M241" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M242" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was estimated in
<inline-formula><mml:math id="M243" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode using the spectral peaks at <inline-formula><mml:math id="M244" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">44</mml:mn></mml:mrow></mml:math></inline-formula>.9971 and
46.0005, respectively. Since <inline-formula><mml:math id="M245" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> does not react with
<inline-formula><mml:math id="M246" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> at collision rate, extensive calibrations with <inline-formula><mml:math id="M247" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M248" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi/><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> standards were made at the experimental conditions
(Fig. S2). The conditions in the instrument reaction cell were the following:
2.19 mbar drift pressure, 60 <inline-formula><mml:math id="M249" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C drift tube temperature, and 542 V
drift voltage for the <inline-formula><mml:math id="M250" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode, resulting in an <inline-formula><mml:math id="M251" display="inline"><mml:mrow><mml:mi>E</mml:mi><mml:mo>/</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula> ratio of
ca. 125 Townsend (Td) (<inline-formula><mml:math id="M252" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> corresponding to the gas number density and <inline-formula><mml:math id="M253" display="inline"><mml:mi>E</mml:mi></mml:math></inline-formula> to
the electric field strength; 1 Td <inline-formula><mml:math id="M254" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M255" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">17</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> Vcm<inline-formula><mml:math id="M256" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>; 2.21 mbar
drift pressure, 90 <inline-formula><mml:math id="M257" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C drift tube temperature, and 296 V drift
voltage in NO<inline-formula><mml:math id="M258" display="inline"><mml:msup><mml:mi/><mml:mo>+</mml:mo></mml:msup></mml:math></inline-formula> mode, resulting in an <inline-formula><mml:math id="M259" display="inline"><mml:mrow><mml:mi>E</mml:mi><mml:mo>/</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula> ratio of ca. 74 Td. The
purity of the primary ions was high. In <inline-formula><mml:math id="M260" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode the fractions
of spurious <inline-formula><mml:math id="M261" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M262" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> ions were <inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula> % and <inline-formula><mml:math id="M264" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">2.1</mml:mn></mml:mrow></mml:math></inline-formula> %, respectively. The amount of primary ions was <inline-formula><mml:math id="M265" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> cps (counts per second) and the signal of the
first water cluster was about 11 %. In <inline-formula><mml:math id="M266" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> mode the fractions of
spurious <inline-formula><mml:math id="M267" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M268" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M269" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> were <inline-formula><mml:math id="M270" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">3.5</mml:mn></mml:mrow></mml:math></inline-formula> %, <inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula> %, and <inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.1</mml:mn></mml:mrow></mml:math></inline-formula> % respectively, relative to the
primary <inline-formula><mml:math id="M273" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> ion signal. The amount of primary ions was <inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.6</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> cps. The ion detector in PTR/SRI-ToF-MS was a time-of-fight mass
analyser with mass resolution of about 4000 (m <inline-formula><mml:math id="M275" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>m<inline-formula><mml:math id="M276" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
FWHM). The
sampling time per bin of ToF acquisition was 0.1 ns, amounting to
350 000 bins for a <inline-formula><mml:math id="M277" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula> spectrum ranging up to <inline-formula><mml:math id="M278" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">400</mml:mn></mml:mrow></mml:math></inline-formula>. The spectral
ion signals used to derive VOC concentrations were calculated following the
procedure described by Cappellin et al. (2011b). The detector dead time was
corrected for applying a procedure based on the Poisson statistics
(Cappellin et al., 2011a; Titzmann et al., 2010). Internal mass calibration was applied by achieving a mass
accuracy better than 0.001 Th (1 Th <inline-formula><mml:math id="M279" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> Da e<inline-formula><mml:math id="M280" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) (Cappellin et al., 2010). The extraction of ion
counts was performed according to Cappellin et al. (2011b), employing an
optimized peak shape from the sample spectra for fitting.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <title>Statistics</title>
      <p id="d1e3807">Statistical analyses were performed using R routines (R
Development Core Team, 2009) developed in-house. Statistical differences of
emissions or uptakes in different conditions were assessed using
Kruskal–Wallis test at a significance level of <inline-formula><mml:math id="M281" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula>.</p>
</sec>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e3828">The dataset is available from
<ext-link xlink:href="https://doi.org/10.4121/uuid:63039e2e-03d6-455d-81de-e94c9671f21c" ext-link-type="DOI">10.4121/uuid:63039e2e-03d6-455d-81de-e94c9671f21c</ext-link> (Cappellin, 2019).</p>
  </notes><app-group>
        <supplementary-material position="anchor"><?pagebreak page3133?><p id="d1e3834">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/acp-19-3125-2019-supplement" xlink:title="pdf">https://doi.org/10.5194/acp-19-3125-2019-supplement</inline-supplementary-material>.<?xmltex \hack{\newpage}?></p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e3844">LC, FL, and KM designed this research. Laboratory
analyses were performed by LC, LC, FL, FB, and PP, and KM wrote the paper.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e3850">The authors declare that they have no conflict of
interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e3856">Luca Cappellin acknowledges funding from H2020-EU.1.3.2 (grant agreement
no. 659315).<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: Thomas Karl<?xmltex \hack{\newline}?>
Reviewed by: two anonymous referees</p></ack><ref-list>
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    <!--<article-title-html>A mechanism for biogenic production and emission of MEK from MVK decoupled from isoprene biosynthesis</article-title-html>
<abstract-html><p>Methyl ethyl ketone (MEK) is an important compound in atmospheric chemistry.
While attention has been paid mostly to anthropogenic sources of MEK,
recently it has been shown that biogenic sources are globally as important as
anthropogenic ones. However, the origin of biogenic MEK has yet to be
completely elucidated. We present the full mechanism by which within-plant
transformation of methyl vinyl ketone (MVK) and, to a minor extent, of
2-butanol and 3-buten-2-ol, is a source of biogenic MEK. Such transformation
is observed in red oak for both exogenous MVK, taken up from the atmosphere,
and endogenous MVK generated within a plant when it experiences stress (e.g. heat stress).
Endogenous MVK emitted by plants is typically explained by within-plant
oxidation of isoprene caused by oxidative stress. In this study we show that
MVK and MEK emissions caused by heat stress are not related to isoprene in
isoprene-emitting plants, implying that the massive carbon investment that
plants commit to isoprene production is not explained by a direct antioxidant
role. The presented mechanism can be important for inclusion in plant
emission and in plant–atmosphere interaction models.</p></abstract-html>
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