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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-19-12607-2019</article-id><title-group><article-title>Evidence of small-scale quasi-isentropic mixing in ridges of extratropical baroclinic waves</article-title><alt-title>Mixing in the ExTL</alt-title>
      </title-group><?xmltex \runningtitle{Mixing in the ExTL}?><?xmltex \runningauthor{D. Kunkel et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Kunkel</surname><given-names>Daniel</given-names></name>
          <email>dkunkel@uni-mainz.de</email>
        <ext-link>https://orcid.org/0000-0002-9652-0099</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Hoor</surname><given-names>Peter</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6582-6864</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Kaluza</surname><given-names>Thorsten</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3700-389X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Ungermann</surname><given-names>Jörn</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-9095-8332</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Kluschat</surname><given-names>Björn</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Giez</surname><given-names>Andreas</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Lachnitt</surname><given-names>Hans-Christoph</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff4">
          <name><surname>Kaufmann</surname><given-names>Martin</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-1761-6325</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff4">
          <name><surname>Riese</surname><given-names>Martin</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6398-6493</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Institute for Atmospheric Physics, Johannes Gutenberg University, Mainz, Germany</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>IEK-7, Forschungszentrum Jülich, Jülich, Germany</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Flight Experiments, Deutsches Zentrum für Luft- und Raumfahrt, Oberpfaffenhofen, Germany</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Institute for Atmospheric and Environmental Research, University of Wuppertal, Wuppertal, Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Daniel Kunkel (dkunkel@uni-mainz.de)</corresp></author-notes><pub-date><day>9</day><month>October</month><year>2019</year></pub-date>
      
      <volume>19</volume>
      <issue>19</issue>
      <fpage>12607</fpage><lpage>12630</lpage>
      <history>
        <date date-type="received"><day>9</day><month>April</month><year>2019</year></date>
           <date date-type="rev-request"><day>15</day><month>April</month><year>2019</year></date>
           <date date-type="rev-recd"><day>21</day><month>August</month><year>2019</year></date>
           <date date-type="accepted"><day>10</day><month>September</month><year>2019</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2019 </copyright-statement>
        <copyright-year>2019</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/.html">This article is available from https://acp.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e174">Stratosphere–troposphere exchange within extratropical cyclones provides
the potential for anthropogenic and natural surface emissions to rapidly
reach the stratosphere as well as for ozone from the stratosphere to
penetrate deep into the troposphere, even down into the boundary layer.
The efficiency of this process directly influences the surface climate,
the chemistry in the stratosphere, the chemical composition of the
extratropical transition layer, and surface pollution levels.
Here, we present evidence for a mixing process within extratropical
cyclones which has gained only a small amount of attention so far and which fosters
the transport of tropospheric air masses into the stratosphere in ridges
of baroclinic waves.
We analyzed airborne measurement data from a research flight of the WISE
(Wave-driven ISentropic Exchange) campaign over the North Atlantic in
autumn 2017, supported by forecasts from a numerical weather prediction
model and trajectory calculations.
Further detailed process understanding is obtained from experiments of
idealized baroclinic life cycles.
The major outcome of this analysis is that air masses mix in the region
of the tropopause and potentially enter the stratosphere in ridges of
baroclinic waves at the anticyclonic side of the jet without changing their
potential temperature drastically.
This quasi-isentropic exchange occurs above the outflow of warm conveyor
belts, in regions which exhibit enhanced static stability in the lower
stratosphere and a Kelvin–Helmholtz instability across the tropopause.
The enhanced static stability is related to radiative cooling below the
tropopause and the presence of small-scale waves.
The Kelvin–Helmholtz instability is related to vertical shear of the
horizontal wind associated with small-scale waves at the upper edge of the
jet stream.
The instability leads to the occurrence of turbulence and consequent
mixing of trace gases in the tropopause region.
While the overall relevance of this process has yet to be assessed, it
has the potential to significantly modify the chemical composition of
the extratropical transition layer in the lowermost stratosphere in
regions which have previously gained a small amount of attention in terms of
mixing in baroclinic waves.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e186">The extratropical transition layer (ExTL) as a unique feature of the
extratropical upper troposphere and lower stratosphere (UTLS) is a
direct consequence of the exchange and consequent mixing between air
masses from the stratosphere and troposphere <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx18" id="paren.1"><named-content content-type="pre">e.g.,</named-content></xref>.
The depth of this transition layer is commonly diagnosed from vertical
distributions of
trace species such as <inline-formula><mml:math id="M1" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M2" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M3" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>, or
<inline-formula><mml:math id="M4" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>
with either distinct tropospheric or
stratospheric sources and from tracer–tracer correlations <xref ref-type="bibr" rid="bib1.bibx25 bib1.bibx44" id="paren.2"><named-content content-type="pre">e.g.,</named-content></xref>.
In the northern summer the ExTL extends up to 30 K in potential
temperature above the local dynamic tropopause and between 20 and 25 K in
all other seasons <xref ref-type="bibr" rid="bib1.bibx26" id="paren.3"/>. In the Southern Hemisphere, the ExTL
seems to be more shallow <xref ref-type="bibr" rid="bib1.bibx21" id="paren.4"/>.</p>
      <?pagebreak page12608?><p id="d1e251"><?xmltex \hack{\newpage}?>The vertical distribution of trace species in the extratropical UTLS
crucially depends on the large-scale stratospheric circulation
<xref ref-type="bibr" rid="bib1.bibx6" id="paren.5"><named-content content-type="pre">e.g.,</named-content></xref> and on stratosphere–troposphere exchange
(STE) across the tropopause <xref ref-type="bibr" rid="bib1.bibx22 bib1.bibx60 bib1.bibx56" id="paren.6"><named-content content-type="pre">e.g.,</named-content></xref>.
Overall, there are three prominent pathways for air into the ExTL.
The stratospheric circulation contributes with two distinct branches
distinguished based on the transit time between the major entry point of
air into the stratosphere, i.e., the tropical tropopause, and the
extratropics.
The so-called deep branch, i.e., that associated with long transit times
affects the ExTL through the descent of old stratospheric
ozone-rich air into the UTLS.
In contrast, the shallow branch with significantly shorter transit times
introduces relatively young air from the tropical and subtropical UTLS
into the extratropical UTLS <xref ref-type="bibr" rid="bib1.bibx2" id="paren.7"/>.
A recent study based on airborne measurements showed
the effect of these two transport pathways on the changing abundance of
carbon monoxide (CO) over the course of the Arctic winter in the ExTL
<xref ref-type="bibr" rid="bib1.bibx33" id="paren.8"/>.
A third pathway into the ExTL is direct injection of extratropical
tropospheric air into the stratosphere by troposphere-to-stratosphere
transport (TST).
These pathways all shape the vertical profiles of the trace
species across the extratropical tropopause and thus can have an impact
on the surface climate through a radiative feedback mechanism.
Changes in the vertical abundance of radiatively active trace species in
the UTLS, for instance for water vapor and ozone, have the relatively
largest impact on the surface temperature <xref ref-type="bibr" rid="bib1.bibx49" id="paren.9"/>.</p>
      <p id="d1e274">Climatological studies revealed that in the Northern Hemisphere midlatitudes  STE occurs predominantly in regions of enhanced cyclone
activity, the storm tracks, over the North Atlantic and Pacific as well
as over the Mediterranean Sea <xref ref-type="bibr" rid="bib1.bibx56" id="paren.10"/>.
Generally, in the extratropics STE occurs more frequently during winter
and more mass is transported from the stratosphere into the troposphere,
i.e., stratosphere-to-troposphere transport (STT) than vice versa, i.e.,
TST.
This has recently been reported by <xref ref-type="bibr" rid="bib1.bibx52" id="text.11"/>, who analyzed STE
based on a 33-year-long time period of ERA-Interim reanalysis data and
trajectory calculations.
This analysis further confirmed earlier studies with respect to the spatial
and temporal occurrence of STE
<xref ref-type="bibr" rid="bib1.bibx8 bib1.bibx41 bib1.bibx11" id="paren.12"><named-content content-type="pre">e.g.,</named-content></xref>.
Also in a climatological sense the occurrence of STE in the extratropics
is independent of the definition of the tropopause as shown by
<xref ref-type="bibr" rid="bib1.bibx4" id="text.13"/> who used four different modern reanalysis data sets
to analyze STE as well as first lapse rate (lrt1) and dynamic tropopause
definitions.</p>
      <p id="d1e291">Within the storm tracks Rossby waves are crucial for STE.
During their life cycle, Rossby waves can lead to the formation of so-called stratospheric streamers and cut-off lows, both being regions of
strong STE activity <xref ref-type="bibr" rid="bib1.bibx57" id="paren.14"/>.
STE also occurs in tropopause folds along jet streams due to the
cross-frontal secondary circulation.
<xref ref-type="bibr" rid="bib1.bibx56" id="text.15"/> demonstrated that exchange between subtropical and
extratropical air masses across the subtropical jet predominantly occurs
in these folds, but tropopause folds also exist at higher latitudes
<xref ref-type="bibr" rid="bib1.bibx53" id="paren.16"/>.
Idealized simulations of baroclinic life cycles and analyses of
reanalysis data showed that dynamic instabilities with low Richardson
numbers, and thus large vertical shear of the horizontal wind, lead to
mixing around tropopause folds <xref ref-type="bibr" rid="bib1.bibx5 bib1.bibx28" id="paren.17"/>.
Using similar data and methods to <xref ref-type="bibr" rid="bib1.bibx52" id="text.18"/>,
<xref ref-type="bibr" rid="bib1.bibx48" id="text.19"/> studied the relevance of extratropical cyclones for
STE over the North Atlantic.
They found that the STT mass flux is generally larger than the TST mass
flux and that the region of the exchange varies slightly during the life
cycle of the cyclone.
This study also confirmed earlier findings which suggested that STE occurs
close to the cyclone center, or rather in regions with a relatively low
tropopause height, and thus more on the cyclonic side of the jet in the region of
the trough <xref ref-type="bibr" rid="bib1.bibx68" id="paren.20"><named-content content-type="pre">e.g.,</named-content></xref>.</p>
      <p id="d1e319">An air parcel crossing the tropopause has to be affected by
non-conservative processes which can modify its potential vorticity
<xref ref-type="bibr" rid="bib1.bibx27" id="paren.21"/>. Only then the air parcel can enter from a region
with generally low potential vorticity (PV), i.e., the troposphere, into a region of high PV,
i.e., the stratosphere, or vice versa.
<xref ref-type="bibr" rid="bib1.bibx37" id="text.22"/> differentiated between diabatic, i.e., potential
temperature changing, and diffusive, i.e., related to friction,
processes and showed that diabatic processes play a more vital role for
STE than diffusive processes.
Analyzing cross-tropopause transport in the UKMO model, <xref ref-type="bibr" rid="bib1.bibx19" id="text.23"/>
found similar results, with cloud and radiative processes being more
important for STE than processes related to turbulence.
In contrast, a recent study by <xref ref-type="bibr" rid="bib1.bibx54" id="text.24"/> shows that
turbulent processes are mainly responsible for changing the PV around
the tropopause in a ridge of an extratropical baroclinic wave. They used
high-resolution ECMWF forecast data and conclude that turbulence is
evident around the jet stream.
This turbulence is mainly related to the vertical shear of
the jet stream but can also be caused by gravity waves <xref ref-type="bibr" rid="bib1.bibx72" id="paren.25"/>.
Radiative effects may play an important role in anticyclones
where radiation lowers the tropopause and thus leads
to a mass flux from the troposphere into the stratosphere <xref ref-type="bibr" rid="bib1.bibx74" id="paren.26"/>.
Radiation is also a key process to dissolve stratospheric cut-off lows
in the troposphere <xref ref-type="bibr" rid="bib1.bibx15" id="paren.27"/>.
Clouds and related diabatic heating may also have an impact on STE.
For instance warm conveyor belts, i.e., airstreams ahead of cold fronts
associated with extratropical cyclones in which strong diabatic heating
by latent heat release occurs <xref ref-type="bibr" rid="bib1.bibx68" id="paren.28"><named-content content-type="pre">e.g.,</named-content></xref>, can reach
the upper troposphere and modify the PV, consequently allowing for
exchange between tropospheric and stratospheric air
<xref ref-type="bibr" rid="bib1.bibx71 bib1.bibx67" id="paren.29"/>.  According to <xref ref-type="bibr" rid="bib1.bibx54" id="text.30"/>
clouds are more likely to change PV in regions with lower tropopause altitudes,
e.g., in the trough. Similarly, rapid transfer from the boundary layer<?pagebreak page12609?> into the UTLS is evident
in convective systems, which sometimes have the potential to overshoot
into the stratosphere <xref ref-type="bibr" rid="bib1.bibx47 bib1.bibx58 bib1.bibx24 bib1.bibx23 bib1.bibx61" id="paren.31"><named-content content-type="pre">e.g.,</named-content></xref>.
Convection can also trigger gravity waves which occasionally break or
dissipate and thus lead to small-scale mixing between tropospheric and
stratospheric air masses <xref ref-type="bibr" rid="bib1.bibx69" id="paren.32"><named-content content-type="pre">e.g.,</named-content></xref>.
Jet-induced gravity waves might play a vital role for STE on small
scales, inducing turbulence and consequently allowing for mixing between
adjacent atmospheric layers <xref ref-type="bibr" rid="bib1.bibx39 bib1.bibx38" id="paren.33"><named-content content-type="pre">e.g.,</named-content></xref>.
Strong shear zones are often apparent at the edges of the jet streams,
which lead to filamentation of tropospheric or stratospheric air masses
<xref ref-type="bibr" rid="bib1.bibx1" id="paren.34"/>.
In these shear zones Kelvin–Helmholtz instabilities (KHIs) can emerge and lead
to intense turbulence <xref ref-type="bibr" rid="bib1.bibx46 bib1.bibx70" id="paren.35"><named-content content-type="pre">e.g.,</named-content></xref>.
In turn this can lead to mixing of air masses around the jet streams.
However, this mixing is thought to be more relevant at the lower edge
<xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx51" id="paren.36"><named-content content-type="pre">e.g.,</named-content></xref> and on the cyclonic side of
the jet and thus in the trough rather than in the ridge of baroclinic waves
<xref ref-type="bibr" rid="bib1.bibx45 bib1.bibx32" id="paren.37"><named-content content-type="pre">e.g.,</named-content></xref>.</p>
      <p id="d1e389">Only a few studies focused on mixing and STE on the anticyclonic side
of the jet in the ridges of baroclinic waves.
Early suggestions were based on individual airborne observations with
small-scale waves being responsible for cross-tropopause transport in
these regions <xref ref-type="bibr" rid="bib1.bibx51 bib1.bibx10" id="paren.38"/>.
Model simulations by <xref ref-type="bibr" rid="bib1.bibx37" id="text.39"/> showed that PV is not
conserved in the ridge of the studied baroclinic wave and that cloud-related processes lead to STE.
<xref ref-type="bibr" rid="bib1.bibx15" id="text.40"/> showed how radiative effects can affect the
tropopause altitude in anticyclones and thus lead to mass exchange from
the troposphere into the stratosphere over the course of several days.
Recently, <xref ref-type="bibr" rid="bib1.bibx36" id="text.41"/> showed that turbulent motions can occur on
top of warm conveyor belt outflows at the altitude of the tropopause.
This coincidence of turbulence in a region of the so-called tropopause
inversion layer <xref ref-type="bibr" rid="bib1.bibx3" id="paren.42"><named-content content-type="pre">TIL;</named-content></xref> addresses an open question
with regard to the extratropical UTLS which is particularly relevant for the ExTL:
does STE occur and does it affect the formation of the ExTL in the ridge of
baroclinic waves where the static stability is usually strong in the
extratropical lowermost stratosphere?</p>
      <p id="d1e409">This study picks up the idea of turbulent mixing in regions of enhanced
lower stratospheric static stability, which initially resulted from
experiments of baroclinic life cycles <xref ref-type="bibr" rid="bib1.bibx36" id="paren.43"/> and which has
recently been described by <xref ref-type="bibr" rid="bib1.bibx30" id="text.44"/> in composites of
baroclinic waves over the North Atlantic.
<xref ref-type="bibr" rid="bib1.bibx3" id="text.45"/> and <xref ref-type="bibr" rid="bib1.bibx20" id="text.46"/> both discussed that enhanced
values of static stability and shear zones emerge close to each other at
the tropopause level. <xref ref-type="bibr" rid="bib1.bibx73" id="text.47"/> addressed this further by linking the enhanced wind
shear to propagating inertia-gravity waves with the potential to induce
mixing without, however, addressing the larger scale meteorological
conditions explicitly.</p>
      <p id="d1e427">In this study we aim to analyze whether those turbulent signatures lead
to mixing and potential exchange of tropospheric and stratospheric air
masses in the ridge of baroclinic waves.
For this we use complementary data of airborne measurements, numerical
weather forecast data, trajectory calculations, and idealized baroclinic
life cycle experiments which are introduced in Sect. <xref ref-type="sec" rid="Ch1.S2"/>.
We will first focus on a research flight from the Wave-driven ISentropic Exchange campaign (Sect. <xref ref-type="sec" rid="Ch1.S3"/>), which aimed to measure
chemical constituents and state parameters across the tropopause in a
baroclinic wave over the North Atlantic.
We then extend a set of well known idealized simulations of baroclinic
life cycles to analyze STE and to obtain a comprehensive understanding
of the processes which lead to mixing and potential STE in the ridge
(Sect. <xref ref-type="sec" rid="Ch1.S4"/>).
We finalize our study with a summary and a conclusion in Sect. <xref ref-type="sec" rid="Ch1.S5"/>.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Data and methods</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Measurements during the WISE campaign 2017</title>
      <p id="d1e453">In autumn 2017 the airborne research mission Wave-driven ISentropic
Exchange (WISE) took place from Oberpfaffenhofen, Germany, and Shannon,
Ireland, with the German HALO (High Altitude LOng Range) research
aircraft.
The main goals of the mission were to examine mixing processes in the
UTLS in association with Rossby wave breaking and to study the impact of
the Asian Summer Monsoon circulation on the budget of radiatively active
species in the lower stratosphere.
One specific target was to study the relation between the lower
stratospheric static stability and cross-tropopause exchange in the
extratropics.</p>
      <p id="d1e456">During WISE, HALO was equipped with a unique set of instruments for
in situ and remote sensing measurements.
In this study we use in situ measurements of <inline-formula><mml:math id="M5" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M6" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>, and potential temperature <inline-formula><mml:math id="M7" display="inline"><mml:mi mathvariant="normal">Θ</mml:mi></mml:math></inline-formula>.
<inline-formula><mml:math id="M8" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M9" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> have been measured with the University
of Mainz Airborne Quantum Cascade Laser Spectrometer (UMAQS).
The instrument is based on direct absorption spectroscopy using a
continuous-wave quantum cascade laser with a sweep rate of 2 kHz
<xref ref-type="bibr" rid="bib1.bibx42" id="paren.48"/>. For the WISE campaign the total drift-corrected
uncertainty was determined to be 0.94 ppb<inline-formula><mml:math id="M10" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:math></inline-formula> for
<inline-formula><mml:math id="M11" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> and 0.18 ppb<inline-formula><mml:math id="M12" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:math></inline-formula> for <inline-formula><mml:math id="M13" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>.
Basic state parameters such as temperature, pressure, the
three-dimensional wind vector, and others were measured with Basic HALO
Measurement and Sensor System (BAHAMAS).
The system is part of the basic aircraft and consists of a data
acquisition system and a suite of sensors for basic meteorological and
aerodynamic measurements.
The system also contains interfaces into several aircraft systems like
the inertial reference unit or the air data computer in order to monitor
aircraft state parameters <xref ref-type="bibr" rid="bib1.bibx34" id="paren.49"/>.
The nose boom of HALO is<?pagebreak page12610?> part of this system and carries the air data
probe for pressure and air flow measurements which are needed for
determination of the wind vector.
Additional BAHAMAS installations are six total air temperature (TAT)
housings on the aircraft nose which can be used for temperature
measurements and as inlets for sensors inside the nose.
Two of these housings contain an open wire PT100 resistance thermometer
for atmospheric temperature measurements, thus providing redundancy for
this important parameter.
The basic frequency for all atmospheric units is 100 Hz; data are usually
processed on a 10 Hz basis. The accuracy of the pressure measurement is
0.3 hPa while the accuracy of the static temperature measurement is
0.5 K.
We also use remote sensing measurements from the Gimballed Limb
Observer for Radiance Imaging of the Atmosphere (GLORIA), which provides
profile information of temperature and static stability, in addition to
numerous trace gases (not used in this study).
GLORIA is an airborne infrared limb imager combining a two-dimensional
infrared detector with a Fourier transform spectrometer
<xref ref-type="bibr" rid="bib1.bibx16 bib1.bibx50" id="paren.50"/>.
The viewing direction is to the right of flight direction and depending
on flight altitude and flight direction GLORIA observes the atmosphere
between about 5 km and flight altitude with a vertical sampling of about
150 m at a tangent altitude of 10 km.
The vertical resolution of retrieved temperature profiles and static
stability is of the order of 300 m.
The horizontal sampling along the flight track is up to 2 km
<xref ref-type="bibr" rid="bib1.bibx31 bib1.bibx65" id="paren.51"/>.</p>
      <p id="d1e561">In total the WISE campaign comprised more than 140 flight hours during
15 research flights between 12 September 2017 and 21 October 2017. All flights
except the first two started in Shannon, Ireland, and covered the North
Atlantic between Greenland, Newfoundland, the Azores, and Europe as well
as continental western and northern Europe.
HALO was mostly flying in the UTLS up to ceiling altitudes of about
15 km, which corresponds to maximum potential temperature values of
about 405 K and minimum pressure values of 130 hPa.
The goal of research flight 07 (RF07) on 28 September 2017 was to study the
abundance of trace species in the extratropical tropopause region. In
particular, in accordance with the major goals of the WISE mission, the
focus of this flight was on whether the trace species show specific
signs of recent STE in regions of enhanced values of static stability in the
lower stratosphere.
Furthermore, the design of this flight was chosen such that the
predictions of the idealized simulations of <xref ref-type="bibr" rid="bib1.bibx36" id="text.52"/> could be
supported by observations.
Thus, the flight was planned in the ridge of a synoptic-scale baroclinic
wave which evolved during the previous days over the North Atlantic at
the edge of a larger scale trough.
A detailed description of the synoptic situation and the flight path
will be given in Sect. <xref ref-type="sec" rid="Ch1.S3.SS1"/>.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>ECMWF forecast data</title>
      <p id="d1e577">We use forecast data from the European Centre for Medium-Range Weather
Forecasts (ECMWF) to support the analysis of the airborne measurements
and to provide more background information about the synoptic
situation.
We choose to use forecast data from ECMWF because they are available hourly
at a very fine horizontal resolution.
The forecast starts at 28 September 2017 00:00 UTC and we use the first 36 hourly
steps until 29 September 2017 12:00 UTC.
These data are used for analysis along the flight path where the full
resolution is used corresponding to regular longitude–latitude grid
spacing of about 0.07<inline-formula><mml:math id="M14" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>.
Moreover, we use a slightly degraded data set with a horizontal grid
spacing of 0.125<inline-formula><mml:math id="M15" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> in the horizontal for a trajectory
analysis.
The forecast data have 137 vertical hybrid pressure-sigma levels up to
0.01 hPa with a vertical spacing of roughly 300 m in the UTLS.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Idealized baroclinic life cycle experiments</title>
      <p id="d1e606">We complement our analysis of the airborne measurements using results
from idealized baroclinic life cycle experiments.
We continue the work of <xref ref-type="bibr" rid="bib1.bibx36" id="text.53"/> using the same setup of the
COSMO <xref ref-type="bibr" rid="bib1.bibx59" id="paren.54"><named-content content-type="pre">COnsortium for Small-scale MOdelling;</named-content></xref> model but extend the analysis with a more specific focus to
analyze STE.
For this we included additional artificial tracers to mark air masses
which are initially located either in the troposphere or in the
stratosphere, separated by the dynamic tropopause for which we use the
isosurface of 2 pvu
(1 pvu <inline-formula><mml:math id="M16" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> K m<inline-formula><mml:math id="M17" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> kg<inline-formula><mml:math id="M18" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M19" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>).
Moreover, we included a tracer which is passively advected and which
carries the information of the initial value of potential
vorticity. With this tracer it is possible to determine how much PV in
each model box has changed by diabatic processes since model start
<xref ref-type="bibr" rid="bib1.bibx35" id="paren.55"/>.
Evaluating the difference between the current PV and the advected
initial PV at the dynamic tropopause therefore allows regions of
TST and STT to be detected.</p>
      <p id="d1e670">We then repeated simulations from <xref ref-type="bibr" rid="bib1.bibx36" id="text.56"/> which included
parameterizations for large-scale and convective clouds, radiation, and
turbulence which have been labeled with BRTC (bulk microphysics,
radiation, turbulence, and convection) by these authors.
The model grid has a regular horizontal grid spacing of 0.4<inline-formula><mml:math id="M20" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> in
longitude and latitude and a vertical grid spacing of 110 m in the
UTLS.
Since the meteorological situation during RF07 was dominated by a wave-breaking event strongly resembling life cycle 1 (LC1), we will focus
our discussion in Sect. <xref ref-type="sec" rid="Ch1.S4"/> to results from LC1
experiments <xref ref-type="bibr" rid="bib1.bibx62" id="paren.57"/>, but we note that we also conducted
simulations of life cycle 2 (LC2).
Moreover, the LC2 experiments qualitatively gave the same results as the
LC1 experiments.
More information about the model setup and physics is given in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>.</p><?xmltex \hack{\newpage}?>
</sec>
<?pagebreak page12611?><sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Trajectory calculations with LAGRANTO</title>
      <p id="d1e701">The Lagrangian analysis tool <xref ref-type="bibr" rid="bib1.bibx55" id="paren.58"><named-content content-type="pre">LAGRANTO;</named-content></xref> allows
calculating trajectories using the kinematic wind from four-dimensional
meteorological data.
It is possible to use both ECMWF and COSMO data as input for the
trajectory calculations.
The first trajectory analysis is based on ECMWF forecast data, which
provides wind fields every hour.
Trajectories have been initialized along the flight path with the goal
of obtaining a more comprehensive picture of the temporal evolution of
the meteorological parameters of the measured air masses.
We will give more details on the trajectory start points and the
analysis in Sect. <xref ref-type="sec" rid="Ch1.S3.SS3"/>.</p>
      <p id="d1e711">For the second trajectory analysis we use COSMO wind fields.
COSMO output is available every hour on a horizontal grid with spacing
of 0.4<inline-formula><mml:math id="M21" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and a vertical spacing of about 110 m in the
UTLS, thus  providing a high-resolution input grid for the trajectory
calculations.
Based on the COSMO model output the goal of the trajectory calculations
is to identify regions of cross-tropopause transport in the baroclinic
life cycle experiments and whether exchange trajectories are evident in
the ridge of the baroclinic wave.
More details will be given in Sect. <xref ref-type="sec" rid="Ch1.S4"/>.</p>
      <p id="d1e725">In general, we identify the exchange of air masses between the
stratosphere and troposphere by the evolution of PV along a
trajectory.
If the PV of an air parcel increases from values below 2 pvu to values
above this threshold, we mark this trajectory as a TST trajectory and
vice versa for STT.</p>
      <p id="d1e728">Finally, note that in this study discussion around static stability is
usually associated with the first lapse rate tropopause, while discussion
about STE is linked to the dynamic tropopause.
Thus, both definitions will be considered in the analysis; however, if
only the term tropopause is used, then we refer to the dynamic
tropopause with a value of 2 pvu throughout the paper.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Quasi-isentropic mixing in a ridge of a baroclinic wave during WISE</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Synoptic situation and flight plan of WISE RF07</title>
      <p id="d1e747">WISE RF07 targeted a fast-evolving baroclinic wave which emerged at the
southern tip of a large-scale trough in the central North Atlantic in
the early hours of 27 September 2017.
While the large-scale trough traveled relatively slowly over the North
Atlantic, the small-scale wave evolved rather fast, with the formation of
a warm sector and well defined upper tropospheric fronts within 24 h
as indicated by the PV at 330 K at 15:00 UTC on 28 September 2017 (Fig. <xref ref-type="fig" rid="Ch1.F1"/>a).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><label>Figure 1</label><caption><p id="d1e754">Synoptic situation during WISE RF7 over the western North
Atlantic at 15:00 UTC on 28 September 2017. <bold>(a)</bold> Potential vorticity on the
isentropic surface of 330 K with high cloud cover (isoline showing a
value of 0.9). <bold>(b)</bold> Meridional cross section of potential vorticity
along <inline-formula><mml:math id="M22" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7.72</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M23" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E longitude and <bold>(c)</bold> zonal cross section
along 54.66<inline-formula><mml:math id="M24" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N latitude. The cross sections also
show isolines of potential temperature (black dashed; 330, 335, 340 K), of
horizontal wind velocity (light blue dashed; 45, 55 m s<inline-formula><mml:math id="M25" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), the Richardson
number (red dashed–dotted; 1), static stability (yellow dashed–dotted;
<inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:mn mathvariant="normal">5.5</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>×</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M27" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), and
cloud ice content (blue dotted; <inline-formula><mml:math id="M28" display="inline"><mml:mrow><mml:mn mathvariant="normal">5</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> kg kg<inline-formula><mml:math id="M29" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). The
cross sections are along the meridian and the circle of latitude of
the red diamond shown in panel <bold>(a)</bold>. This point also marks the location
where the picture in Fig. <xref ref-type="fig" rid="Ch1.F2"/>b is taken.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f01.png"/>

        </fig>

      <p id="d1e880">The flight focused on the rapidly evolving ridge, which was expected to
be strongly affected by diabatic processes and the vertical transport of
boundary layer air in the region of the warm conveyor belt (WCB) ahead of the
surface cold front.
This system was expected to be situated close to Ireland in the
afternoon hours of 28 September 2017.
Take-off of WISE RF07 was at 13:15 UTC with a total flight time of 7 h
47 min.
The flight strategy was twofold: first, staggered flight levels at FL400
(northeastward), FL380 (southwestward), FL360 (northeastward), FL340
(southwestward), FL420 (northeastward), and FL450 (southwestward)
through the ridge of the baroclinic wave and second a survey of the
stratospheric air with large PV values above the occlusion of the
baroclinic wave west of Ireland (see also flight path in Figs. <xref ref-type="fig" rid="Ch1.F1"/>a and <xref ref-type="fig" rid="Ch1.F2"/>a).
The intention of the first part in the northernmost part of the ridge of
the baroclinic wave was to conduct co-located measurements of
atmospheric state parameters and trace species across the local
tropopause.
The staggered flight level allowed these quantities to be measured in situ at
different altitudes below, at, and above the level of the tropopause.
From the highest flight levels (FL420 and FL450) in cloud-free
conditions, two-dimensional distributions of temperature and trace
species along the flight track were remotely measured with GLORIA.
Our analysis focuses on the first part of the RF07, in particular on the
first flight leg in the southwestward direction at FL380 (see Fig. <xref ref-type="fig" rid="Ch1.F2"/>a).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><label>Figure 2</label><caption><p id="d1e892"><bold>(a)</bold> Three-dimensional flight track of WISE RF07, highlighting
the flight legs important for this study. The arrows point in the
direction of the flight on the respective levels. The dashed lines on
the surface map show the angle of view of the photo shown in panel <bold>(b)</bold>. <bold>(b)</bold> Photo taken on board
HALO at 15:03 UTC during WISE RF07 showing Kelvin–Helmholtz cloud
billows on top of a cirrus cloud deck.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f02.jpg"/>

        </fig>

      <p id="d1e909">A large part of the first leg of FL380 in the southwesterly direction was
just above a widespread cirrus cloud deck associated with the upper
tropospheric outflow of the WCB of the low pressure system.
The high cloud cover in Fig. <xref ref-type="fig" rid="Ch1.F1"/>a shows the location of this cloud deck.
The WCB also manifests itself in the low values of PV in the upper troposphere
in the region where the ice clouds reach up to the tropopause (Fig. <xref ref-type="fig" rid="Ch1.F1"/>b, c).
PV values are close to 0 pvu or even slightly below, which is common in
such a situation due to a decreasing heating rate above the level of
maximum heating <xref ref-type="bibr" rid="bib1.bibx7 bib1.bibx29" id="paren.59"><named-content content-type="pre">e.g.,</named-content></xref>.</p>
      <p id="d1e921">In the lower stratosphere the PV shows enhanced variability above the
WCB outflow region  (Fig. <xref ref-type="fig" rid="Ch1.F1"/>b, c).
There are also high values of static stability evident, with values
reaching as high as <inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M31" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.
However, these high values emerge rather as wave-like patches and not as
a layer.
In between the high values the static stability has rather tropospheric
background values (see also Fig. <xref ref-type="fig" rid="Ch1.F3"/>).
More so, this region also exhibits low values of the Richardson number,
indicative of Kelvin–Helmholtz instability and thus turbulence.
Such a co-located enhancement of static stability and presence of
turbulence was also evident in the life cycle experiments of
<xref ref-type="bibr" rid="bib1.bibx36" id="text.60"/> and has recently been reported by <xref ref-type="bibr" rid="bib1.bibx30" id="text.61"/>
based on a composite analysis of baroclinic waves over the North
Atlantic.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><?xmltex \currentcnt{3}?><label>Figure 3</label><caption><p id="d1e967"><bold>(a)</bold> Static stability along the flight path between
14:00 and 16:00 UTC (color-shaded) along with potential temperature (black
solid), cloud ice water content (blue dashed), the altitude of the
dynamic tropopause (gray solid), and the Richardson number smaller than
1 (gray dotted) based on ECMWF forecast data. Black dotted line shows
the altitude of HALO. <bold>(b)</bold> Static stability at GLORIA tangent points
between 17:20 and 18:20 UTC. Black line shows the flight altitude with
black crosses marking points of measurement. Thick gray lines show 2
and 4 pvu, thin gray line the 350 K isentrope based on ECMWF forecast
data. Gray dotted points mark the location of the first lapse rate
tropopause. <bold>(c)</bold> ECMWF forecast data sampled at GLORIA tangent points.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f03.png"/>

        </fig>

      <p id="d1e984">Another indication of turbulence in the region above the cloud deck
stems directly from observations of Kelvin–Helmholtz cloud billows close
to the flight path (Fig. <xref ref-type="fig" rid="Ch1.F2"/>b).
A photo was taken at 15:03 UTC in a northwestern direction (Fig. <xref ref-type="fig" rid="Ch1.F2"/>a, diamond in Fig. <xref ref-type="fig" rid="Ch1.F1"/>a, b).
The billows are indicative of a KHI
which is thought to favor mixing of adjacent atmospheric layers and thus
affects the vertical gradient of trace<?pagebreak page12612?> species.
Notably, since the KHI emerges in the vicinity of the tropopause, it
could potentially lead to STE.
Commonly, a critical Richardson number of 0.25 identifies a KHI.
However, in a non-convective situation such small Richardson numbers
rely on large vertical shear of the horizontal wind.
In turn, models based on a discretized grid with a grid spacing of a few
hundred meters or more in the vertical can often not resolve the
vertical shear sufficiently.
In the region of the observed cloud billows we find Richardson numbers
in the ECMWF model of about 1.
We therefore use a Richardson number equal to 1 as a proxy for KHI in the
UTLS for our analysis.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><label>Figure 4</label><caption><p id="d1e996">Time series of measured <inline-formula><mml:math id="M32" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> (blue) and potential
temperature <inline-formula><mml:math id="M33" display="inline"><mml:mi mathvariant="normal">Θ</mml:mi></mml:math></inline-formula> (red solid)  as well as modeled potential
temperature <inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Θ</mml:mi><mml:mi mathvariant="normal">M</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (red dashed), Richardson number <italic>Ri</italic>
(gray dashed), and altitudes of the dynamic (2 pvu, black dashed) and
the first lapse rate (lrt1, black dotted) tropopause between 14:15
and 15:15 UTC during WISE RF07. Black solid line shows the altitude of
the aircraft, the gray areas indicate the time periods discussed in
the text.</p></caption>
          <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f04.png"/>

        </fig>

      <p id="d1e1039">Now we focus on the flight leg from northeast to southwest at FL380 between 14:20 and 15:20 UTC.
HALO came from FL400 which was then deeper in the stratosphere with
potential temperatures above 350 K.
At FL380 HALO was initially flying in the lowermost stratosphere, then
gradually approaching and finally crossing the dynamic
tropopause, which was slightly tilted according to the ECMWF analysis
(Fig. <xref ref-type="fig" rid="Ch1.F3"/>a).
This is in remarkable agreement with measurements of <inline-formula><mml:math id="M35" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>,
which increases to tropospheric values at FL380 (Fig. <xref ref-type="fig" rid="Ch1.F4"/>), as is discussed further below.
On this leg the aircraft crossed the lower part of the structures with
alternating large and low values of static stability.
This structure is potentially linked to a propagating inertia-gravity
wave which commonly emerges during baroclinic wave developments
<xref ref-type="bibr" rid="bib1.bibx43" id="paren.62"><named-content content-type="pre">e.g.,</named-content></xref>.
Furthermore, in the region with low values of static stability an area
with low Richardson numbers is evident which extends into the region of
the maximum of static stability at around 15:00 UTC.</p>
      <p id="d1e1064">Before we analyze the time period between 14:00 and 15:00 UTC more
specifically in Sect. <xref ref-type="sec" rid="Ch1.S3.SS2"/>, we want to point out one
model deficiency.
Although the ECMWF forecast predicted the atmospheric state very well,
there is evidence that extreme values of state parameters are missed or
at least underestimated, with potential consequences for the
representation of mixing in the UTLS.
We already mentioned that we think that the Richardson numbers from the
ECMWF forecast might have values that are too large in
regions<?pagebreak page12613?> around the tropopause where the vertical shear of the
horizontal wind is large.
However, this is difficult to verify from airborne measurements, since
all two-dimensional information on the temperature and wind is
missing along the flight path.
We can overcome this issue at least partly by using temperature
retrievals from GLORIA and comparing static stability (the numerator of
the Richardson number calculation) from the model and from measurements
(Fig. <xref ref-type="fig" rid="Ch1.F3"/>b, c).
For this we use the last northeastward leg on FL420, i.e., <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">13</mml:mn></mml:mrow></mml:math></inline-formula> km and 169 hPa, between 17:20 and 18:20 UTC, when HALO was flying above
the maximum values of static stability.
Static stability from GLORIA measurements exhibits larger values than that
from the ECMWF model as well as a smaller vertical extension of the
entire wave structure.
Thus, the model forecast underestimates the strength of the inversion,
most potentially related to deficiencies in representing the gravity
wave in this region due to the still relatively coarse grid spacing in the
UTLS.
Since the gravity wave also affects the three-dimensional wind, it could
be assumed that the vertical shear of the horizontal wind might not be
sufficiently represented in the model and thus the gradient Richardson
number.</p>
      <p id="d1e1082">In summary, the synoptic situation during WISE RF07 strongly resembles
the situation of the idealized baroclinic wave of <xref ref-type="bibr" rid="bib1.bibx36" id="text.63"/>.
Consequently, it is now possible to investigate a prediction from an
idealized model study with airborne measurements and seek signs of
turbulent motions in the measurement data.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Airborne in situ measurements and evidence of mixing around
the tropopause – WISE RF07</title>
      <p id="d1e1096">We start our analysis by focusing on the time period between 14:20 and 14:54 UTC (gray areas in Fig. <xref ref-type="fig" rid="Ch1.F4"/>)
and will first concentrate on the in situ measurements of nitrous oxide
<inline-formula><mml:math id="M37" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> and potential temperature <inline-formula><mml:math id="M38" display="inline"><mml:mi mathvariant="normal">Θ</mml:mi></mml:math></inline-formula> along with several
parameters from the ECMWF forecast interpolated on the flight track.
Based on <inline-formula><mml:math id="M39" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M40" display="inline"><mml:mi mathvariant="normal">Θ</mml:mi></mml:math></inline-formula> we further subdivided the time
period of interest into three shorter periods (gray scales in Fig. <xref ref-type="fig" rid="Ch1.F4"/>).
During the first period from 14:20 to 14:46 UTC, <inline-formula><mml:math id="M41" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> volume
mixing ratios below <inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:mn mathvariant="normal">331.31</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.45</mml:mn></mml:mrow></mml:math></inline-formula> ppb<inline-formula><mml:math id="M43" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:math></inline-formula> indicate that
HALO was flying in an air mass of stratospheric origin.
This value represents the airborne measured tropospheric mean of
<inline-formula><mml:math id="M44" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> during the WISE campaign and is calculated following
<xref ref-type="bibr" rid="bib1.bibx42" id="text.64"/>.
HALO was flying at a constant pressure level while slowly approaching
the dynamic as well as the first lapse rate tropopause.
In the second time period between 14:36 and 14:48 UTC the distance between
tropopause and flight level decreased to a few hundred meters or less
according to the PV analysis.
Notably, this part of the flight close to the tropopause in the ExTL
shows low Richardson numbers.
Around 14:40 UTC the time series of both <inline-formula><mml:math id="M45" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M46" display="inline"><mml:mi mathvariant="normal">Θ</mml:mi></mml:math></inline-formula>
show strong wave-like structures with periods of about 2 min.
The horizontal wavelength can be roughly estimated to be about 25 km,
using a mean ground speed of 210 m s<inline-formula><mml:math id="M47" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> of HALO during this
part of the flight and assuming that the wave has been crossed
perpendicular to the wave crests.
The amplitude of the wave is about 2.5 K and the wave spans the
potential temperature range between 335 and 340 K.
Interestingly, this wave structure is hardly evident in the modeled <inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Θ</mml:mi><mml:mi mathvariant="normal">M</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, indicating that the model might have issues
representing these scales accurately.
The model shows signs of gravity wave activity, however, not directly at
the flight altitude<?pagebreak page12614?> but slightly above (not shown).
The ECMWF forecast model with a horizontal grid spacing of about 8 km
can barely resolve this wave pattern with this fine-scale structure due
to the grid spacing of the model.
The last period between 14:48 and 14:54 UTC shows strong variability in
both <inline-formula><mml:math id="M49" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M50" display="inline"><mml:mi mathvariant="normal">Θ</mml:mi></mml:math></inline-formula> without any clear wave signal but
large variability of <inline-formula><mml:math id="M51" display="inline"><mml:mi mathvariant="normal">Θ</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M52" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>.
This increase in variability could be regarded as a first indicator of
increased atmospheric turbulence.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><label>Figure 5</label><caption><p id="d1e1281">Trace gas analysis of the first southwestward leg on FL380,
i.e., 205 hPa of WISE RF07. <bold>(a)</bold> Vertical profile of carbon monoxide for
the entire flight (blue dots) and color-coded for the leg on FL380. <bold>(b)</bold> Vertical profile of <inline-formula><mml:math id="M53" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> for the time period
14:20–15:00 UTC, color-coded with time since 14:00 UTC. <bold>(c)</bold> <inline-formula><mml:math id="M54" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>–<inline-formula><mml:math id="M55" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> correlation for the time period 14:20–15:00 UTC,
color-coded with potential temperature. <bold>(d–f)</bold> Vertical profiles of
<inline-formula><mml:math id="M56" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> for time periods 14:20–14:36, 14:36–14:48, and 14:48–14:54 UTC, color-coded with time. <bold>(g–i)</bold> <inline-formula><mml:math id="M57" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>–<inline-formula><mml:math id="M58" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> correlations for the time periods
14:20–14:36, 14:36–14:48, and 14:48–14:54 UTC, color-coded
with potential temperature.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f05.png"/>

        </fig>

      <p id="d1e1364">If turbulence occurred in a region of strong tracer gradients at or
upwind of where the measurements were taken, it should have affected the composition of
trace gases.
Both <inline-formula><mml:math id="M59" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M60" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> exhibit vertical gradients in the
lower  stratosphere (Fig. <xref ref-type="fig" rid="Ch1.F5"/>a for <inline-formula><mml:math id="M61" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>).
We first focus on <inline-formula><mml:math id="M62" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> since it has a much stronger gradient at
the tropopause due to its shorter lifetime compared to <inline-formula><mml:math id="M63" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>.
HALO was initially in the stratosphere with low values of <inline-formula><mml:math id="M64" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>
and at the end of the time period close to the troposphere with larger
values of <inline-formula><mml:math id="M65" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F5"/>b).
The gradual transition between the more stratospheric to more
tropospheric <inline-formula><mml:math id="M66" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> values occurs at potential temperatures
between 335 and 340 K.
This <inline-formula><mml:math id="M67" display="inline"><mml:mi mathvariant="normal">Θ</mml:mi></mml:math></inline-formula> interval also shows low Richardson numbers in the ECMWF
model (Figs. <xref ref-type="fig" rid="Ch1.F4"/>, <xref ref-type="fig" rid="Ch1.F3"/>a).
Moreover, the color code in Fig. <xref ref-type="fig" rid="Ch1.F5"/>b reveals the
consecutive alternation between low potential temperature/large
<inline-formula><mml:math id="M68" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> values and high potential temperature/low <inline-formula><mml:math id="M69" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>
values, indicating the impact of the small-scale wave on the tracer and
potential temperature.
To identify mixing of tracers, we analyzed the
<inline-formula><mml:math id="M70" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>–<inline-formula><mml:math id="M71" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> relationship, which provides information
on irreversible tracer exchange similar to <inline-formula><mml:math id="M72" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>–<inline-formula><mml:math id="M73" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
<xref ref-type="bibr" rid="bib1.bibx14" id="paren.65"><named-content content-type="pre">e.g.,</named-content></xref>.
In general, at the tropopause the <inline-formula><mml:math id="M74" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>–<inline-formula><mml:math id="M75" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> correlation shows
almost tropospheric mixing ratios of <inline-formula><mml:math id="M76" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">90</mml:mn></mml:mrow></mml:math></inline-formula> ppb<inline-formula><mml:math id="M78" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:math></inline-formula>) and <inline-formula><mml:math id="M79" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">331</mml:mn></mml:mrow></mml:math></inline-formula> ppb<inline-formula><mml:math id="M81" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">v</mml:mi></mml:msub></mml:math></inline-formula>) at potential temperature levels typical for the extratropical
tropopause in the current case (<inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">335</mml:mn></mml:mrow></mml:math></inline-formula> K).
Above the tropopause both
<inline-formula><mml:math id="M83" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M84" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios decrease with increasing potential temperature.
However, the <inline-formula><mml:math id="M85" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>–<inline-formula><mml:math id="M86" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> correlation of the time period between
14:20 and 14:54 UTC does not show such a clear relationship of decreasing
<inline-formula><mml:math id="M87" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M88" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> and simultaneously increasing potential
temperature (Fig. <xref ref-type="fig" rid="Ch1.F5"/>c).
If the time period is instead divided into three shorter time periods
following the gray shading in Fig. <xref ref-type="fig" rid="Ch1.F4"/>, then only
the first period shows a relationship between <inline-formula><mml:math id="M89" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M90" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, and potential temperature as one would expect from the
large-scale vertical profiles of these quantities (Fig. <xref ref-type="fig" rid="Ch1.F5"/>d, g).
However, for the other two time periods the tracer–tracer relation with
respect to potential temperature changes.
For the time between 14:36 and 14:48 UTC the vertical profile of
<inline-formula><mml:math id="M91" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> shows a wave-like transition (Fig. <xref ref-type="fig" rid="Ch1.F5"/>e), while the correlation shows isentropic mixing on
different isentropes as indicated by mixing lines connecting
tropospheric and stratospheric values between 335 and 340 K (Fig. <xref ref-type="fig" rid="Ch1.F5"/>h).
In the last time period the relation between <inline-formula><mml:math id="M92" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M93" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, and
potential temperature seems to almost entirely break down, reflecting
the initial thought of increased variability in the tracer mixing ratio
and potential temperature (Fig. <xref ref-type="fig" rid="Ch1.F5"/>f, i).
Thus, based on the trace gas analysis, we think that turbulence
increasingly affected the second and third time periods to a substantial
degree in contrast to the first time period.
This could ultimately lead to exchange of trace constituents across the
tropopause in a narrow range of potential temperature levels.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><label>Figure 6</label><caption><p id="d1e1744">Power spectral densities of measured potential temperature from
HALO for selected time periods: <bold>(a)</bold> 14:20–15:00 UTC and <bold>(b)</bold> 18:19–19:18 UTC.
Black solid lines are introduced for better comparability, red solid
line shows a line with a slope of <inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula>, blue solid line shows a line
with a slope of <inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula>.</p></caption>
          <?xmltex \igopts{width=483.69685pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f06.png"/>

        </fig>

      <?pagebreak page12615?><p id="d1e1791"><?xmltex \hack{\newpage}?>We further analyze the occurrence of turbulence with the help of power
spectral densities of potential temperature.
Power spectral densities of trace species or state parameters allows the estimation of how much energy is present at a particular spatial scale
<xref ref-type="bibr" rid="bib1.bibx66" id="paren.66"/>.
On board HALO the frequency of measurements is about 10 Hz for the state
parameters such as temperature and wind, while it is about 2–3 Hz for
<inline-formula><mml:math id="M96" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M97" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>.
Along with an average ground speed of about 210 m s<inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and
with the 10 Hz measurements of the state parameters this potentially
allows us to identify atmospheric structures down to about 100 m.
The shape of these power spectral densities allows the
contribution of individual scale ranges to the total energy spectrum to be assessed and
indicates the type of turbulence that affects the considered domain
<xref ref-type="bibr" rid="bib1.bibx66" id="paren.67"/>.
The power spectral density from the flight leg on FL380 (Fig. <xref ref-type="fig" rid="Ch1.F6"/>a) reveals a slope close to <inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula>.
This slope often characterizes three-dimensional isotropic turbulence, i.e., dynamic
processes on or below the mesoscale affect the flow <xref ref-type="bibr" rid="bib1.bibx64 bib1.bibx72" id="paren.68"><named-content content-type="pre">e.g.,</named-content></xref>.
At a later leg in the same direction of the flight on flight level FL420
between 17:20 and 18:20 UTC the power spectral density follows a
slope of <inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F6"/>b).
This slope indicates a dominance of geostrophic turbulence and
thus larger synoptic scales affecting the flow.
To summarize, the slope of <inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> close to the tropopause suggests that
mesoscale processes, e.g., those related to gravity waves, might be
substantial to explain the dynamics in the tropopause region.</p>
</sec>
<?pagebreak page12616?><sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Trajectory-based history of measured air masses during WISE RF07</title>
      <p id="d1e1902">The analyses of trace gas distributions, tracer–tracer correlations, and
power spectral densities suggest that mixing is evident in the region
between 335 and 340 K.
In particular, the <inline-formula><mml:math id="M102" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios reveal that
tropospheric and stratospheric air masses participate in the mixing process.
Our next goal is to elucidate the recent history of the measured air masses.
For this we calculated kinematic trajectories backward and forward in time
which start each second along the flight path for the time period
between 14:24 and 14:54 UTC based on ECMWF forecast data available
between 28 September 2017 at 00:00 UTC and 29 September 2017 at 12:00 UTC.
More specifically, the trajectories start at the horizontal location of
the airplane as well as at adjacent locations <inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.07</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> in
longitudinal and latitudinal directions to cover some of the uncertainty
due to the gridded representation of the meteorological input variables
and to increase the number of trajectories for statistical purposes.
Moreover, trajectories start at each full isentropic level between 334
and 341 K and not only at the flight altitude of HALO.
This allows us to study the fate of the entire region, which is subject
to mixing according to the measurement.</p>
      <p id="d1e1932">Since we are interested in STE and mixing, we first search for those air
masses which cross the tropopause around the time of the measurement and
which encounter a KHI.
For this we filter all trajectories to find those trajectories which
cross the dynamic tropopause and which encounter Richardson numbers
smaller than 1 at any point in time during the period of the trajectory
calculation.
We note, however, that our STE criterion is rather weak, since we only
require that the PV of the trajectories is below the PV threshold for
the dynamic tropopause at the start of the analysis (28 September 2017 01:00 UTC)
and above the threshold at the end (29 September 2017 11:00 UTC).
Thus, for further discussion we omit the terminology of TST and
STT trajectories as coherent ensembles of trajectories which
cross the tropopause only once from the troposphere (stratosphere) to
the stratosphere (troposphere) <xref ref-type="bibr" rid="bib1.bibx60 bib1.bibx68" id="paren.69"/>.
We think instead of trajectories which show the potential of mixing around the
tropopause by encountering low Richardson numbers and having PV values changing
between tropospheric and stratospheric values, which nevertheless lead to a
subsequent exchange across the tropopause.
As mentioned above, we consider low Richardson numbers of the order of
1 as good proxies for KHI.
We further study the three time periods of interest from the earlier
analysis separately (Fig. <xref ref-type="fig" rid="Ch1.F4"/>).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><?xmltex \currentcnt{7}?><label>Figure 7</label><caption><p id="d1e1942">Trajectories crossing the 2 pvu isosurface and encountering a
dynamic instability which cross the flight track between 14:36 and 14:48 UTC while HALO was flying on FL380. Trajectories start on
28 September 2017 at 01:00 UTC and end on
29 September 2017 at 11:00 UTC. The four panels show the following quantities
along the trajectories: <bold>(a)</bold> pressure (in hPa), <bold>(b)</bold> potential vorticity
(in pvu), <bold>(c)</bold> time since 15:00 UTC (in h), and <bold>(d)</bold> Richardson number. In
total each panel shows 12 375 individual trajectories.</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f07.png"/>

        </fig>

      <p id="d1e1964">Interestingly, we find trajectories indicating upward transport which
show the same behavior in dynamic and thermodynamic quantities in each
of the three time periods between 14:20 and 14:54 UTC.
These trajectories always follow a wave-like flow from the North
Atlantic towards the British Isles before they turn anticyclonically
towards central Europe (Fig. <xref ref-type="fig" rid="Ch1.F7"/>).
Minimum pressure is evident over the North Atlantic when the
trajectories pass through the large-scale trough.
Over Ireland and the British Islands the trajectories rise again while
encountering the region of the KHI with minimum Richardson numbers.
Starting from this region the trajectories strongly decelerate (see
Fig. <xref ref-type="fig" rid="Ch1.F7"/>c) in a
region of alternating horizontal divergence (not shown explicitly).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><?xmltex \currentcnt{8}?><label>Figure 8</label><caption><p id="d1e1973">Time series of dynamic and thermodynamic quantities of mixing
trajectories crossing the dynamic tropopause and experiencing a
KHI. The time axis is relative to 28 September 2017 at 15:00 UTC. The eight panels
show the following variables along the trajectories: <bold>(a)</bold> potential
vorticity (in pvu), <bold>(b)</bold> static stability (in
<inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M105" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), <bold>(c)</bold> pressure (in hPa), <bold>(d)</bold> potential
temperature (in K), <bold>(e)</bold> relative vorticity (in
<inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M107" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), <bold>(f)</bold> vertical wind (in m s<inline-formula><mml:math id="M108" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>),
<bold>(g)</bold> Richardson number, and <bold>(h)</bold> turbulence index after <xref ref-type="bibr" rid="bib1.bibx13" id="text.70"/>
(in <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M110" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). Note that the time period shown here is shorter than the total time period used for the trajectory analysis.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f08.png"/>

        </fig>

      <p id="d1e2101">The analysis of the PV along the potential TST trajectories shows that
these trajectories oscillate around the dynamic<?pagebreak page12617?> tropopause rather than
cross the tropopause as a coherent ensemble once and then reside in the
lower stratosphere.
This is somewhat evident in Fig. <xref ref-type="fig" rid="Ch1.F8"/>a, where only
those trajectories are shown which at the physical start time of the
trajectories have PV values initially smaller and at the last physical
time step have PV values larger than the respective dynamic tropopause PV
value (here 2 pvu).
The trajectories show no straight traverse from the troposphere into the
stratosphere.
However, several points shall be noted for the time close to the
measurement briefly before 15:00 UTC.
The static stability shows a maximum which is not evident in PV but
is accompanied by a strong decrease in relative vorticity towards
anticyclonic flow (Fig. <xref ref-type="fig" rid="Ch1.F8"/>b, e).
The maximum in static stability follows a period where the trajectories
encounter alternating vertical wind, which is a sign of flow through
small-scale waves.
At the end of this time period signs of turbulent motions increase.
Initially, the turbulence index increases due to vertical wind shear as
well as stretching and shearing deformation <xref ref-type="bibr" rid="bib1.bibx13" id="paren.71"/>.
Later low values of the Richardson number emerge which are indicative
for KHI.
The appearance of turbulence is further associated with a slight
increase in potential temperature which is on the order of 1–2 K, thus
the process can be regarded as  quasi-isentropic.</p>
      <p id="d1e2111"><?xmltex \hack{\newpage}?>The major difference between the three time periods between 14:20 and 14:54 UTC is the number of occurrences of these characteristic mixing
trajectories, relative to the dynamic tropopause.
During the first part between 14:20 and 14:36 UTC, we find only about 1.7 % out of 69 048 trajectories crossing the tropopause and having low
Richardson numbers. This number increases to 23.9 % out of 51 768 in the second part and
to 21.9 % out of 25 920 in the last part from 14:48 to 14:54 UTC.
Notably, this result does not depend on the choice of our PV value for
the dynamic tropopause.
This indicates that a rather thick layer around the tropopause up to 3.5 pvu is affected by this mixing process, in particular between
14:36 and 14:48 UTC according to the trajectory analysis.
Moreover, there is also a tendency of air masses from above to be mixed
downward.
For this we select trajectories which initially have a PV value above
and finally below the desired dynamic tropopause value.
Although they are most evident in the second and third part, such trajectories
are in general much less common than those with an increasing PV value
over the considered time period. In line with this is that the stratospheric influence on the measured
air masses substantially decreases from the first to the third time
period.
While about two-thirds of t<?pagebreak page12618?>he trajectories originate in regions above 5 pvu in the first part, only about a quarter does in the second part and
less than 0.5 % in the third part.</p>
      <p id="d1e2115">Consequently, the trajectory analysis shows that different air masses of
tropospheric and stratospheric origin come together in the second and
third part of the considered time period.
This is in line with the measured trace gas concentrations of
<inline-formula><mml:math id="M111" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M112" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>.
However, based on the trajectory analysis it is difficult to estimate
whether STE and in particular TST occurs in a way that air parcels cross
the dynamic tropopause only once from the troposphere into the stratosphere
and stay there afterwards.
We also performed longer trajectory calculations which, however, also
provide no further evidence of TST trajectories which then reside in the
stratosphere over a longer time period.
We instead find trajectories which, based on PV, alternate back and forth between
troposphere and stratosphere and which encounter low Richardson numbers
along their paths.
One potential reason for why no TST trajectories which
stay in the stratosphere are found is that the model fails to correctly resolve
the process.
In contrast, assuming that the model performed well, it could simply
mean that in this specific case the mixing occurred only across the
tropopause with no substantial STE taking place.
Independently of which is the case, this process changes the gradients
of the trace gases in this region which in turn is of importance for
radiative transfer calculations <xref ref-type="bibr" rid="bib1.bibx49" id="paren.72"><named-content content-type="pre">e.g.,</named-content></xref>.</p>
</sec>
</sec>
<?pagebreak page12619?><sec id="Ch1.S4">
  <label>4</label><title>Mechanisms for mixing in ridges of baroclinic waves</title>
      <p id="d1e2153">After the analysis of airborne measurements, the first question to arise is
how generic such a mixing process may be in ridges of baroclinic waves.
We can answer this question at least partly when searching for this
process in idealized baroclinic life cycle experiments which are generic
counterparts of atmospheric baroclinic waves.
If the process is evident in the experiments, it might occur frequently
in the real atmosphere and thus be of significance.
Furthermore, the idealized experiments allow us to further analyze the
physical processes which lead to mixing and potentially to STE.
For this we use model results based on the idealized simulations already
used in <xref ref-type="bibr" rid="bib1.bibx36" id="text.73"/>.
The simulations include non-conservative processes (in terms of PV) such
as large-scale and convective cloud microphysics, radiative effects from
trace species and clouds, and vertical turbulence.
These simulations were labeled with BRTC (bulk microphysics,
radiation, turbulence, and convection) in <xref ref-type="bibr" rid="bib1.bibx36" id="text.74"/>.
We further conducted simulations for life cycles 1 and 2
<xref ref-type="bibr" rid="bib1.bibx62" id="paren.75"/>; however, we focus our discussion here on results
for life cycle 1.
We extended the BRTC simulations by including tracers to mark the air
which was initially in the stratosphere or troposphere as well as to
trace the initial PV distribution.
Furthermore, we calculated kinematic trajectories to analyze STE.</p>
      <p id="d1e2165">We first show that STE occurs in the model simulation.
For this we calculated backward trajectories starting every 6 h
between 24 and 192 h of model integration.
The start points of these trajectories were distributed around the
dynamic tropopause, i.e., the 2 pvu isosurface.
They were initialized at each grid point in the horizontal and between
1.5 km below and 1.5 km above the local dynamic tropopause in the
vertical.
Each time, more than 240 000 trajectories are then traced back for 6 h and consequently filtered based on whether they cross the
tropopause.
Furthermore, we searched for those STE trajectories which change their
potential vorticity within the 6 h by a given PV value to
circumvent a residence time criterion suggested by <xref ref-type="bibr" rid="bib1.bibx67" id="text.76"/>.
For instance, we assume that trajectories which have an initial
potential vorticity smaller than 1.5 pvu and a final one of larger
than 2.5 pvu have a larger probability of staying in the stratosphere than if
the only criterion is to cross the 2 pvu isosurface.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F9" specific-use="star"><?xmltex \currentcnt{9}?><label>Figure 9</label><caption><p id="d1e2173">Temporal evolution of maximum static stability (black, in
<inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M114" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), minimum surface pressure (red, in hPa) as
well as the number of TST and STT trajectories per 6 h interval
over the course of the idealized baroclinic life cycle experiment BRTC
LC1. The maximum static stability <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:msubsup><mml:mi>N</mml:mi><mml:mi mathvariant="normal">max</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula> is derived by
first averaging the static stability in the vertical between the
altitudes of the local lapse rate tropopause and 1 km
above. The maximum value is then determined from the resulting two-dimensional field over the horizontal model domain.</p></caption>
        <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f09.png"/>

      </fig>

      <p id="d1e2222">The number of TST and STT trajectories based on these 6 h long
back trajectories reveal that STE starts to occur slightly after the
time of the first enhancement of <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> during the growing stage of the
surface cyclone (Fig. <xref ref-type="fig" rid="Ch1.F9"/>).
<xref ref-type="bibr" rid="bib1.bibx36" id="text.77"/> attributed the increase in lower stratospheric static
stability to updrafts in the troposphere.
This can be regarded as the first time step when the tropopause is
affected significantly by the tropospheric dynamics related to the
baroclinic wave.
Note that the initial state of the baroclinic life cycle experiments is
designed such that the tropospheric background value is <inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>×</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M118" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and that the stratospheric
value is <inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M120" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.
Peak values for STE are evident after 160 h of model integration, in the
final stage of the life cycle <xref ref-type="bibr" rid="bib1.bibx48" id="paren.78"/>.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F10" specific-use="star"><?xmltex \currentcnt{10}?><label>Figure 10</label><caption><p id="d1e2322">The tropospheric tracer <inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:msub><mml:mi>X</mml:mi><mml:mi mathvariant="normal">ts</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> on first full
stratospheric level, i.e., the first full level with PV values larger
than 2 pvu for <bold>(a)</bold> 60 h and <bold>(b)</bold> 108 h after model start. Diabatic change of
PV, <inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>Q</mml:mi><mml:mo>=</mml:mo><mml:mi>Q</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">adv</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, at the level of the dynamic
tropopause with <inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">adv</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> being the advected initial PV and
<inline-formula><mml:math id="M124" display="inline"><mml:mi>Q</mml:mi></mml:math></inline-formula> being the full PV for <bold>(c)</bold> 60 h and <bold>(d)</bold> 108 h after model start. The
black isoline shows static stability,
<inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">5.5</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>×</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M126" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The blue dashed lines
show isolines of potential temperature for 315  and 325 K.</p></caption>
        <?xmltex \igopts{width=483.69685pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f10.png"/>

      </fig>

      <p id="d1e2443">We also find a spatial coincidence in the horizontal plane between the enhancement of <inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> above the thermal tropopause and TST across the dynamic tropopause by analyzing passive tracers in our idealized simulations (Fig. <xref ref-type="fig" rid="Ch1.F10"/>).
The tropospheric tracer, initialized with a constant non-zero mixing ratio in the troposphere and zero in the stratosphere, shows enhanced values at the first model layer in the stratosphere, exactly in the region where static stability is also enhanced.
We define the first model level in the stratosphere as the first full model level above the dynamic tropopause.
This region also marks the region where the tropospheric tracer enters the stratosphere.
This is first evident after about 60 h (Fig. <xref ref-type="fig" rid="Ch1.F10"/>a), but also at later time steps (Fig. <xref ref-type="fig" rid="Ch1.F10"/>b).
We can further confirm these findings based on our diabatic PV tracer.
This tracer carries the information about the difference between the current and the initial value of PV in each grid box <xref ref-type="bibr" rid="bib1.bibx35" id="paren.79"/>.
Evaluating this difference in the dynamic tropopause allows us to diagnose whether an air mass at the dynamic tropopause gained or lost PV, and thus whether this air mass initially resided in the troposphere or in the stratosphere.
Positive values of this difference indicate a gain of PV, i.e., TST, and negative values a loss of PV, i.e., STT, of the respective air mass at the dynamic tropopause since model start (Fig. <xref ref-type="fig" rid="Ch1.F10"/>c, d).
In contrast to TST and although a temporal coincidence is also evident
for <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> enhancement and occurrence of STT, no spatial co-occurrence is
evident for STT in regions of enhanced <inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F10"/>c, d; and also based on the analysis of the
stratospheric tracer which is not shown explicitly here).
Thus, from the distribution of these passive tracers, we can conclude that there is also a spatial coincidence between TST and enhancement of static stability.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F11" specific-use="star"><?xmltex \currentcnt{11}?><label>Figure 11</label><caption><p id="d1e2495">Zonal cross sections along the center of the model domain at 45<inline-formula><mml:math id="M130" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N show static stability (contour filled), potential
temperature (330, 335, 340 K, black lines), cloud ice water
content (<inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> kg kg<inline-formula><mml:math id="M132" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, blue lines),
potential vorticity (2–6 pvu, gray lines), and the altitude of
the thermal tropopause (black dots). Red lines show isolines of the
horizontal wind speed (45–65 m s<inline-formula><mml:math id="M133" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) and blue crosses show
points of trajectories at the respective longitude which cross the
tropopause from the troposphere to the stratosphere over the course of
the last 6 h for <bold>(a)</bold> 60 h and <bold>(b)</bold> 72 h after model start.</p></caption>
        <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f11.png"/>

      </fig>

      <p id="d1e2562">Furthermore, the exchange occurs in the ridge of the baroclinic wave,
just above a region of ice cloud occurrence (Fig. <xref ref-type="fig" rid="Ch1.F11"/>).
This region is also strongly affected by a small-scale wave pattern
related to a propagating inertia gravity wave which is evident in the
isolines of potential temperature and PV.
This wave is one source of the enhanced values of static stability.
The other source is radiative cooling below and at the tropopause related to
ice clouds in the upper troposphere.
The first time TST occurs in this region is after about 60 h,
while it is evidently more frequent during later stages of the life
cycle.
We thus find a pathway from the troposphere into the stratosphere in
the ridge of baroclinic waves in our idealized simulations.
The situation is as initially expected from the results of
<xref ref-type="bibr" rid="bib1.bibx36" id="text.80"/> and resembles the situation of the mixing and
potential TST in the ridge during WISE RF07.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F12" specific-use="star"><?xmltex \currentcnt{12}?><label>Figure 12</label><caption><p id="d1e2573">Trajectories starting 66 h and ending 72 h after model start
which increase their PV from values smaller than 1.5 pvu to values
larger than 2.5 pvu within the 6 h interval. Panels show <bold>(a)</bold> static
stability (in <inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M135" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), <bold>(b)</bold> potential temperature
(in K), <bold>(c)</bold> relative vorticity (in <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M137" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), and
turbulent kinetic energy (in m<inline-formula><mml:math id="M138" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M139" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) along the
trajectories for each hour.</p></caption>
        <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f12.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13" specific-use="star"><?xmltex \currentcnt{13}?><label>Figure 13</label><caption><p id="d1e2667">Panels <bold>(a)</bold> and <bold>(c)</bold> show gradient Richardson number, <italic>Ri</italic>,
panels <bold>(b)</bold> and <bold>(d)</bold> TKE after 72 h of model integration. Panels <bold>(a)</bold> and <bold>(b)</bold> show a horizontal cross section at the dynamic tropopause
along with isolines of static stability with values of
<inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">5.5</mml:mn><mml:mo>×</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M141" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and
<inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:msup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">7.0</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>×</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M143" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; panels <bold>(c)</bold> and <bold>(d)</bold> show zonal
cross sections at 45<inline-formula><mml:math id="M144" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N in the center of the model domain,
including isolines of various variables (see detailed description in
Fig. <xref ref-type="fig" rid="Ch1.F11"/>).</p></caption>
        <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f13.png"/>

      </fig>

      <?pagebreak page12622?><p id="d1e2793">Before we end our discussion by studying the processes leading to
mixing, we want to highlight the fact that in our idealized simulations
two types of TST trajectories are apparent (Fig. <xref ref-type="fig" rid="Ch1.F12"/>).
One set of TST trajectories exhibits low values of static stability, low
potential temperatures, positive relative vorticity, and moderate
turbulent kinetic energy (TKE).
In contrast, the other set of TST trajectories shows large values of
static stability, higher potential temperatures, negative relative
vorticity, and larger values of TKE.
Thus, while the first set of trajectories crosses the tropopause at the
cyclonic side of the jet at rather low altitudes, the other set of
trajectories crosses the tropopause at the anticyclonic side of the jet
at rather high altitudes.
Such trajectories are found over a large part of the life cycle and also in
the case where we apply different criteria for a change of PV, e.g., from
1.5 to 3.0 pvu.
A common feature of the two sets of trajectories is that in both cases
the potential temperature values hardly change in the 6 h; thus,
the TST occurs quasi-isentropically.
We also note that the trajectories crossing the tropopause in the ridge
of the wave experience large values of static stability, thus passing
through the TIL.
Thus, what initially might seem counter-intuitive, i.e., the exchange in
the vicinity of large values of static stability inhibiting vertical
motions, is nevertheless possible in the ridge of the baroclinic waves.</p>
      <p id="d1e2798">The last point that we want to address is the processes causing the
mixing and exchange across the tropopause in the ridge of the baroclinic
wave.
The occurrence of turbulence becomes apparent from low values of the
gradient Richardson number and enhanced values of TKE (Fig. <xref ref-type="fig" rid="Ch1.F13"/>).
The Richardson number is the ratio between static stability and vertical
shear of the horizontal wind.
Since static stability shows rather large values above the tropopause,
the source of low Richardson numbers results from large vertical shear
of the horizontal wind (Fig. <xref ref-type="fig" rid="Ch1.F14"/>a).
The shear is largest in the ridge where a gravity wave is evident at the
edges of the jet stream.
The shear also contributes to enhanced values of TKE and might thus
explain its enhancement.
However, TKE further depends on the vertical gradient of the total
moisture, which can consequently lead to a buoyant heat flux
<xref ref-type="bibr" rid="bib1.bibx12" id="paren.81"/>.
This buoyant heat flux shows positive and negative<?pagebreak page12623?> values at the
tropopause, most probably related to the propagating and potentially
dissipating gravity wave (Fig. <xref ref-type="fig" rid="Ch1.F14"/>b).
In particular, in the region of the TST trajectories negative values are
dominant which could indicate upward motions in an otherwise stable
environment.
The stability is further increased by a radiative feedback of the ice
clouds (Fig. <xref ref-type="fig" rid="Ch1.F14"/>c).
Cooling is evident at the top of the clouds which in turn enhances the
static stability above the tropopause in the region of the mixing
<xref ref-type="bibr" rid="bib1.bibx17 bib1.bibx36" id="paren.82"><named-content content-type="pre">e.g.,</named-content></xref>.
Thus, we identified the processes which allow for mixing induced by
shear in a region which is stably stratified.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F14"><?xmltex \currentcnt{14}?><label>Figure 14</label><caption><p id="d1e2820">Zonal cross sections of
<bold>(a)</bold> vertical shear of horizontal wind <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:msup><mml:mi>S</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>,
<bold>(b)</bold> buoyant heat flux <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:msup><mml:mi>w</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:msubsup><mml:mi mathvariant="normal">Θ</mml:mi><mml:mi mathvariant="normal">v</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, and
<bold>(c)</bold> long wave heating rate d<inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Θ</mml:mi><mml:mi mathvariant="normal">LW</mml:mi></mml:msub><mml:mo>/</mml:mo></mml:mrow></mml:math></inline-formula>d<inline-formula><mml:math id="M148" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>
at 45<inline-formula><mml:math id="M149" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and after 72 h of model integration. For the
description of isolines it is referred to Fig. <xref ref-type="fig" rid="Ch1.F11"/>.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f14.png"/>

      </fig>

</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Summary and conclusions</title>
      <p id="d1e2908">A recent study by <xref ref-type="bibr" rid="bib1.bibx36" id="text.83"/> showed the concurrent occurrence of
enhanced static stability in the lower stratosphere and increased
turbulent motions across the extratropical tropopause in the ridge of
idealized baroclinic life cycles.
Here, we present evidence that such a situation corresponds with mixing
of trace gases at the level of or slightly above the tropopause and
eventually with transport of tropospheric air into the stratosphere.
To the authors' knowledge this process has gained only a small amount attention
so far, in particular in terms of the formation of the extratropical
transition layer.
We derive our conclusions from airborne measurements along with high
resolution ECMWF model data to identify the occurrence of mixing and
potential TST in the ridge of a baroclinic wave.
We further extended experiments of idealized baroclinic life cycles from
<xref ref-type="bibr" rid="bib1.bibx36" id="text.84"/> to elucidate the driving mechanisms and to obtain a
more general picture of the mixing process.</p>
      <p id="d1e2917">During WISE RF07 signs of turbulent mixing are evident between 335 and 340 K
potential temperature in the lowermost stratosphere just above the
tropopause.
The region of interest was situated above an extended cloud deck
associated with a  warm conveyor belt outflow and was substantially
affected by small-scale waves in the lowermost stratosphere.
Vertical profiles of tracers with a sufficient long lifetime in the
UTLS such as <inline-formula><mml:math id="M150" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M151" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> and their correlations
are used to identify quasi-isentropic mixing between air masses of
different origin.
In particular, the <inline-formula><mml:math id="M152" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> tracer mixing ratios suggest that
tropospheric and stratospheric air masses mix in this region.
Power spectral densities of potential temperature support the analysis
suggesting that mesoscale rather than synoptic-scale processes affect the
power spectrum in the region of mixing.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F15" specific-use="star"><?xmltex \currentcnt{15}?><label>Figure 15</label><caption><p id="d1e2956">Zonal cross sections along <inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7.25</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M154" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E on
28 September 2017 at 12:00 UTC show static stability (color shaded), the altitude
of the 2 pvu isosurface (light gray), cloud water content (black),
cloud ice content (blue), horizontal wind speed (red), and Richardson
number (dark gray). The three panels show <bold>(a)</bold> the ECMWF forecast (with
0.07<inline-formula><mml:math id="M155" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> horizontal grid spacing and <inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">300</mml:mn></mml:mrow></mml:math></inline-formula> m vertical grid
point spacing in the UTLS), <bold>(b)</bold> the ERA-Interim reanalysis (with
0.75<inline-formula><mml:math id="M157" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> horizontal grid spacing and <inline-formula><mml:math id="M158" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1000</mml:mn></mml:mrow></mml:math></inline-formula> m vertical grid
spacing), and <bold>(c)</bold> the ERA5 reanalysis (with 0.25<inline-formula><mml:math id="M159" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> horizontal
grid spacing and <inline-formula><mml:math id="M160" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">300</mml:mn></mml:mrow></mml:math></inline-formula> m vertical grid spacing).</p></caption>
        <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://acp.copernicus.org/articles/19/12607/2019/acp-19-12607-2019-f15.png"/>

      </fig>

      <?pagebreak page12624?><p id="d1e3051">Furthermore, ECMWF forecast data with the highest available resolution
are used to obtain a broader view on the synoptic situation.
Although the model performs well in representing the overall situation,
some deviations have been found between model and measurements.
In particular, these deviations occur at small scales which seem to be
substantial in the representation of the mixing process.
Nevertheless, trajectory calculations based on the model data show that
mixing occurs around the tropopause and affects the lower part of the
extratropical transition layer.
The mixing occurs in regions of enhanced lower stratospheric static
stability, relatively high potential temperature, anticyclonic flow, and
during a time when the flow is affected by vertical shear, deformation,
and moderate alternating vertical motions.</p>
      <p id="d1e3054">Moreover, numerical experiments of idealized baroclinic life cycles
support the observational findings.
In the model simulations it is evident that mixing occurs in the ridge
of baroclinic waves, just above the top of ice clouds.
Using special tracers and kinematic trajectories, we showed that even
TST occurs in regions of enhanced static stability, thus in the region
of the TIL.
To a large degree the mixing is the result of a Kelvin–Helmholtz
instability which has its source in enhanced vertical shear, as has
recently been demonstrated by <xref ref-type="bibr" rid="bib1.bibx30" id="text.85"/>.
This shear is strongly related to inertia-gravity wave dynamics at the
upper edge of the jet stream.
Moreover, buoyant heat fluxes caused by the upper-tropospheric clouds
may also enhance the turbulence across the tropopause.</p>
      <p id="d1e3060">The overall relevance of this process still needs to be analyzed. This is
beyond the scope of the current study.
However, on the one hand this process occurs on small scales, and is
related to cirrus clouds at the tropopause and a strong wind shear which
in turn seems to be related to small-scale waves in the lower
stratosphere.
Thus, the impact on the trace gases in the upper troposphere and lower
stratosphere might be not particularly large due to the limited
geographical extent of the combinations of these processes.
On the other hand all this occurs within baroclinic life cycles which
are relatively frequent features of the extratropical UTLS.
Thus, there is potentially a non-negligible contribution of this mixing
process to the composition of the extratropical transition layer.
In particular, since this mixing occurs at relatively high potential
temperatures, it can affect regions which have previously not been
considered to be strongly affected by STE in baroclinic waves.
Previous studies showed that the main exchange in the extratropics
occurs at lower potential temperature levels at the lower edge of the
jet stream.</p>
      <p id="d1e3063">One reason why the process described in this study has not gained much
attention is that numerical weather prediction models and in particular
reanalysis products as well as climate models do not resolve the UTLS
sufficiently, thus potentially missing or misrepresenting the relevant
processes.
However, reanalysis data sets in particular build the basis for almost all
recent climatological studies of STE <xref ref-type="bibr" rid="bib1.bibx52 bib1.bibx4" id="paren.86"><named-content content-type="pre">e.g.,</named-content></xref>.
Figure <xref ref-type="fig" rid="Ch1.F15"/> shows the same cross section for
different ECMWF products.
While the forecast shows many fine-scale features, e.g., in the cloud
structure and the location of the tropopause, these features are almost
entirely missing in ERA-Interim.
This is to a large degree caused by the poorer vertical resolution of
ERA-Interim, which is similar to the resolution in current climate
models.
In contrast, the new ERA5 reanalysis data which use the same vertical
grid spacing as the current forecast model show more similarity to the
forecast and might thus allow for a better representation of STE in the
extratropics than ERA-Interim.
However, potentially even the forecast data still have problems
capturing all features fully and correctly, because the vertical grid spacing of
that data is still relatively coarse compared to our idealized
simulations with a vertical grid spacing of 110 m and a horizontal grid
spacing of 0.4<inline-formula><mml:math id="M161" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>, which  captured the TST relatively well.
Thus, an increase in vertical model resolution seems to be necessary to
further address this process and its potential consequences, on smaller as well as
larger scales.</p><?xmltex \hack{\newpage}?>
</sec>

      
      </body>
    <back><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d1e3087">ECMWF (forecast, ERA-Interim, and ERA5) data have
been retrieved from the MARS server. The airborne measurement data
from the WISE campaign are available through the HALO database
(<uri>https://halo-db.pa.op.dlr.de/</uri>, last access: 1 October 2019). The code of the COSMO model is
available on request from the COSMO consortium
(<uri>http://www.cosmo-model.org/</uri>, last access: 1 October 2019). LAGRANTO is available from
<uri>http://iacweb.ethz.ch/staff//sprenger/lagranto/</uri> (last access: 1 October 2019). Output from the
idealized COSMO simulations is available upon request
(dkunkel@uni-mainz.de).</p>
  </notes><?xmltex \hack{\clearpage}?><app-group>

<?pagebreak page12626?><app id="App1.Ch1.S1">
  <?xmltex \currentcnt{A}?><label>Appendix A</label><title>Idealized model setup</title>
      <p id="d1e3110">The model setup described here has also been used in
<xref ref-type="bibr" rid="bib1.bibx36" id="text.87"/>. Additionally, more information can be found in
<xref ref-type="bibr" rid="bib1.bibx35" id="text.88"/>, where only a version without parameterized physics
has been used.</p>
      <p id="d1e3119">We use the non-hydrostatic regional model COSMO in an idealized,
spherical, midlatitude channel configuration <xref ref-type="bibr" rid="bib1.bibx59" id="paren.89"><named-content content-type="pre">COSMO: COnsortium
for Small-scale MOdelling;</named-content></xref>. The dynamical core of the
model solves the hydro-thermodynamical equations. A fourth-order
horizontal hyper-diffusion has to be applied to guarantee numerical
stability. Time integration is performed with a third-order Runge–Kutta
scheme. Passive tracer advection is done with a fourth-order Bott scheme
with Strang splitting.</p>
      <p id="d1e3127">Physical parameterizations have been included in our simulations for
turbulence, radiation, large-scale, and convective clouds. These
processes are included in the acronym of the simulation BRTC (B: bulk
microphysics, R: radiation, T: turbulence, and C: convection).</p>
      <p id="d1e3130">Turbulence is calculated for the three-dimensional wind, the liquid
water potential temperature, and the total water. Budget equations for
the second-order moments are reduced under application of a closure of
level 2.5 (in the notation of <xref ref-type="bibr" rid="bib1.bibx40" id="altparen.90"/>); i.e., local
equilibrium is assumed for all moments except for turbulent kinetic
energy (TKE), for which advection and turbulent transport is
retained. Only vertical turbulent fluxes are parameterized under
consideration of the Boussinesq approximation. Moreover, the TKE budget
equation depends significantly on the vertical shear of the horizontal
wind components and the vertical change in liquid water potential
temperature and total water.</p>
      <p id="d1e3137">Radiation is parameterized by the <inline-formula><mml:math id="M162" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula>-2 stream approximation, i.e.,
separate treatment of solar and terrestrial wavelengths. In total, eight
spectral bands are considered, five in the solar range and three
infrared bands. Absorbing and scattering gases are water vapor with a
variable content as well as <inline-formula><mml:math id="M163" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M164" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M165" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M166" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M167" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
with fixed amounts. Aerosols have been totally neglected whereas a cloud
radiative feedback can be calculated in all spectral bands.</p>
      <p id="d1e3205"><?xmltex \hack{\newpage}?>Large-scale cloud microphysics follow a bulk approach using a single-moment scheme with five types of water categories being treated
prognostically: specific humidity, cloud water and ice, as well as rain
and snow. These five water types can interact within various processes
such as cloud condensation and evaporation, depositional growth and
sublimation of snow, evaporation of snow and rain, melting of snow and
cloud ice, homogeneous and heterogeneous nucleation of cloud ice,
autoconversion, collection, and freezing. The scheme of
<xref ref-type="bibr" rid="bib1.bibx63" id="text.91"/> is used to parameterize subgrid-scale convective
clouds and their effects on the large-scale environment. This approach
uses moisture convergence in the boundary layer to estimate the cloud
base mass flux. The convection scheme then affects the large-scale
budgets of the environmental dry static energy, the specific humidity,
and the potential energy.</p>
      <p id="d1e3212">The baroclinic waves have a wavenumber of 6. The model domain spans over
60<inline-formula><mml:math id="M168" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> longitude and 70<inline-formula><mml:math id="M169" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitude with a grid spacing of 0.4<inline-formula><mml:math id="M170" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> in the horizontal and 110 m in the vertical from the surface up
to 25 km. In the uppermost 7 km of the model domain, Rayleigh damping is
applied to avoid reflection of upward-propagating signals; the surface
of the model domain is flat. In the meridional direction the boundary
conditions are relaxed towards the initial values to avoid reflection of
outgoing signals, while periodic boundary conditions are specified in
the zonal direction.</p>
      <p id="d1e3242">The initial conditions consist of a background state and of a
superimposed anomaly of potential vorticity. The background state for
temperature, pressure, and horizontal wind is by construction
baroclinically unstable. The anomaly of potential vorticity is
introduced at the altitude of the tropopause. This anomaly can be
inverted to obtain perturbations fields for <inline-formula><mml:math id="M171" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M172" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M173" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula>, and <inline-formula><mml:math id="M174" display="inline"><mml:mi>v</mml:mi></mml:math></inline-formula>. Slight changes
in these initial conditions allow us to study various types of
baroclinic waves. In our study we focus on life cycles of type 1
<xref ref-type="bibr" rid="bib1.bibx62" id="paren.92"><named-content content-type="pre">LC1,</named-content></xref>. If an additional barotropic shear is
considered during construction of the background state, life cycles of
type 2 (LC2) can be created. More information on the initial conditions
and the model setup in general can be found in <xref ref-type="bibr" rid="bib1.bibx35 bib1.bibx36" id="text.93"><named-content content-type="post">and references
therein</named-content></xref>.</p><?xmltex \hack{\clearpage}?>
</app>
  </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e3289">DK and PH designed the study. MR, MK, PH, and DK
organized the WISE campaign and were part of the scientific flight
planning team. DK, PH, and BK analyzed the in situ data from WISE; JU provided GLORIA and AG BAHAMAS data. HCL performed the spectral analysis of the BAHAMAS data. DK and TK analyzed ECMWF model data. DK ran the
idealized simulations and analyzed the data with input from PH. DK
wrote the paper with input from PH and TK; all authors contributed to editing the paper.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e3295">The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e3301">Special thanks to the entire WISE team for the successful
campaign. Logistics were handled by DLR-FX – many thanks for the great
support and organization before, during, and after the campaign. Also, a
special thanks is due to the pilots for the realization of the specific flight
patterns.
More information about the WISE campaign can be found at
<uri>https://www.wise2017.de/</uri> (last access: 1 October 2019).
We further thank all members of the GLORIA instrument team for their
large efforts in developing the first airborne IR
limb imager. The GLORIA hardware was mainly funded by the Helmholtz
Association of German Research Centres through several large investment
funds.
The authors also thank Heini Wernli and Michael Sprenger for the opportunity to use LAGRANTO for this study.
The authors are grateful to ECMWF for providing operational analysis and
forecast as well as reanalysis data through the MARS server. The authors acknowledge funding from the German Science Foundation, as this study was carried out
as part of the preparation phase for the WISE campaign under funding from the HALO SPP 1294. Parts of this research were conducted
using the supercomputer Mogon and advisory services offered by Johannes
Gutenberg University Mainz (<uri>http://hpc.uni-mainz.de</uri>, last access: 1 October 2019), which is a member of the
AHRP (Alliance for High Performance Computing in Rhineland Palatinate,
<uri>http://www.ahrp.info</uri>, last access: 1 October 2019) and the Gauss Alliance e.V. The authors gratefully
acknowledge the computing time granted on the supercomputer Mogon at
Johannes Gutenberg University Mainz (<uri>http://hpc.uni-mainz.de</uri>, last access: 1 October 2019). The authors thank two anonymous reviewers for their valuable comments which further improved the paper.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e3318">This research has been supported by the Deutsche Forschungsgemeinschaft (grant nos. KU 3524/1-1, HO 4225/7-1, and HO 4225/8-1).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e3324">This paper was edited by Peter Haynes and reviewed by two anonymous referees.</p>
  </notes><?xmltex \hack{\newpage}?><ref-list>
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    <!--<article-title-html>Evidence of small-scale quasi-isentropic mixing in ridges of extratropical baroclinic waves</article-title-html>
<abstract-html><p>Stratosphere–troposphere exchange within extratropical cyclones provides
the potential for anthropogenic and natural surface emissions to rapidly
reach the stratosphere as well as for ozone from the stratosphere to
penetrate deep into the troposphere, even down into the boundary layer.
The efficiency of this process directly influences the surface climate,
the chemistry in the stratosphere, the chemical composition of the
extratropical transition layer, and surface pollution levels.
Here, we present evidence for a mixing process within extratropical
cyclones which has gained only a small amount of attention so far and which fosters
the transport of tropospheric air masses into the stratosphere in ridges
of baroclinic waves.
We analyzed airborne measurement data from a research flight of the WISE
(Wave-driven ISentropic Exchange) campaign over the North Atlantic in
autumn 2017, supported by forecasts from a numerical weather prediction
model and trajectory calculations.
Further detailed process understanding is obtained from experiments of
idealized baroclinic life cycles.
The major outcome of this analysis is that air masses mix in the region
of the tropopause and potentially enter the stratosphere in ridges of
baroclinic waves at the anticyclonic side of the jet without changing their
potential temperature drastically.
This quasi-isentropic exchange occurs above the outflow of warm conveyor
belts, in regions which exhibit enhanced static stability in the lower
stratosphere and a Kelvin–Helmholtz instability across the tropopause.
The enhanced static stability is related to radiative cooling below the
tropopause and the presence of small-scale waves.
The Kelvin–Helmholtz instability is related to vertical shear of the
horizontal wind associated with small-scale waves at the upper edge of the
jet stream.
The instability leads to the occurrence of turbulence and consequent
mixing of trace gases in the tropopause region.
While the overall relevance of this process has yet to be assessed, it
has the potential to significantly modify the chemical composition of
the extratropical transition layer in the lowermost stratosphere in
regions which have previously gained a small amount of attention in terms of
mixing in baroclinic waves.</p></abstract-html>
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