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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-18-9561-2018</article-id><title-group><article-title>A climatological view of the vertical stratification of RH, <inline-formula><mml:math id="M1" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <?xmltex \hack{\break}?><inline-formula><mml:math id="M2" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>
within the PBL and at the interface with free troposphere as <?xmltex \hack{\break}?>seen by IAGOS
aircraft and ozonesondes at northern <?xmltex \hack{\break}?>mid-latitudes over 1994–2016</article-title><alt-title>A climatological view of the vertical stratification of RH, <inline-formula><mml:math id="M3" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M4" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula></alt-title>
      </title-group><?xmltex \runningtitle{A climatological view of the vertical stratification of RH, {$\chem{O_{{3}}}$} and {$\chem{CO}$}}?><?xmltex \runningauthor{H. Petetin et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Petetin</surname><given-names>Hervé</given-names></name>
          <email>hervepetetin@gmail.com</email>
        <ext-link>https://orcid.org/0000-0001-5746-6504</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Sauvage</surname><given-names>Bastien</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3410-2139</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Smit</surname><given-names>Herman G. J.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Gheusi</surname><given-names>François</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Lohou</surname><given-names>Fabienne</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4374-0127</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Blot</surname><given-names>Romain</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Clark</surname><given-names>Hannah</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5602-5328</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Athier</surname><given-names>Gilles</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2364-5234</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Boulanger</surname><given-names>Damien</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6935-1106</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Cousin</surname><given-names>Jean-Marc</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Nedelec</surname><given-names>Philippe</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Neis</surname><given-names>Patrick</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Rohs</surname><given-names>Susanne</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5473-2934</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Thouret</surname><given-names>Valérie</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Laboratoire d'Aérologie, Université de Toulouse, CNRS, UPS,
Toulouse, France</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Forschungszentrum Jülich GmbH, Institut für Energie- und
Klimaforschung, IEK-8 Troposphere, 52425 Jülich, Germany</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>IAGOS-AISBL, Brussels, Belgium</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Observatoire Midi-Pyrénées, Université de Toulouse, CNRS,
UPS, Toulouse, France</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Hervé Petetin (hervepetetin@gmail.com)</corresp></author-notes><pub-date><day>6</day><month>July</month><year>2018</year></pub-date>
      
      <volume>18</volume>
      <issue>13</issue>
      <fpage>9561</fpage><lpage>9581</lpage>
      <history>
        <date date-type="received"><day>22</day><month>March</month><year>2018</year></date>
           <date date-type="rev-request"><day>24</day><month>April</month><year>2018</year></date>
           <date date-type="rev-recd"><day>20</day><month>June</month><year>2018</year></date>
           <date date-type="accepted"><day>27</day><month>June</month><year>2018</year></date>
      </history>
      <permissions>
        
        
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018.html">This article is available from https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018.pdf</self-uri>
      <abstract>
    <p id="d1e261">This paper investigates in an innovative way the climatological vertical
stratification of relative humidity (RH), ozone (<inline-formula><mml:math id="M5" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) and carbon monoxide (<inline-formula><mml:math id="M6" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>)
mixing ratios within the planetary boundary layer (PBL) and at the
interface with the free troposphere (FT). The climatology includes all
vertical profiles available at northern mid-latitudes over the period
1994–2016 in both the IAGOS (In-service Aircraft for a Global Observing System)
and WOUDC (World Ozone and Ultraviolet Radiation Data Centre) databases,
which represents more than 90 000 vertical profiles. For all individual
profiles, apart from the specific case of surface-based temperature
inversions (SBIs), the PBL height is estimated following the elevated
temperature inversion (EI) method. Several features of both SBIs and EIs are
analysed, including their diurnal and seasonal variations. Based on these PBL
height estimates (denoted <inline-formula><mml:math id="M7" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula>), the novel approach introduced in this paper
consists of building a so-called PBL-referenced vertical distribution of
<inline-formula><mml:math id="M8" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M9" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> and RH by averaging all individual profiles beforehand
expressed as a function of <inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> rather than <inline-formula><mml:math id="M11" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> (with <inline-formula><mml:math id="M12" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> the altitude).
Using this vertical coordinate system allows us to highlight the features
existing at the PBL–FT interface that would have been smoothed otherwise.</p>
    <p id="d1e336">Results demonstrate that the frequently assumed well-mixed PBL remains an
exception for both chemical species. Within the PBL, <inline-formula><mml:math id="M13" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> profiles are
characterized by a mean vertical stratification (here defined as the
standard deviation of the <inline-formula><mml:math id="M14" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> profile between the surface and the PBL top,
normalized by the mean) of 11 %, with moderate seasonal and diurnal
variations. A higher vertical stratification is observed for <inline-formula><mml:math id="M15" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing
ratios (18 %), with stronger seasonal and diurnal variability (from
<inline-formula><mml:math id="M16" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 10 % in spring–summer midday–afternoon to <inline-formula><mml:math id="M17" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 25 % in winter–fall night). This vertical stratification is distributed
heterogeneously in the PBL with stronger vertical gradients observed at both
the surface (due to dry deposition and titration by NO for <inline-formula><mml:math id="M18" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and due
to surface emissions for <inline-formula><mml:math id="M19" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>) and the PBL–FT interface. These gradients vary
with the season from the lowest values in summer to the highest ones in winter. In
contrast to <inline-formula><mml:math id="M20" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, the <inline-formula><mml:math id="M21" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> vertical stratification was found to vary with
the surface potential temperature following an interesting bell shape with
the weakest stratification for both the lowest (typically negative) and highest
temperatures, which could be due to much lower <inline-formula><mml:math id="M22" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> dry deposition in
the presence of snow.</p>
    <p id="d1e430">Therefore, results demonstrate that EIs act as a geophysical interface
separating air masses of distinct chemical composition and/or chemical
regime. This is further supported by the analysis of the correlation of
<inline-formula><mml:math id="M23" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M24" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios between the different altitude levels in the
PBL and FT (the so-called vertical autocorrelation). Results<?pagebreak page9562?> indeed
highlight lower correlations apart from the PBL–FT interface and higher
correlations within each of the two atmospheric compartments (PBL and FT).</p>
    <p id="d1e452">The mean climatological <inline-formula><mml:math id="M25" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M26" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> PBL-referenced profiles analysed in
this study are freely available on the IAGOS portal for all seasons and
times of day (<ext-link xlink:href="https://doi.org/10.25326/4" ext-link-type="DOI">10.25326/4</ext-link>).</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e484">As the region of the atmosphere where exchanges of momentum, water and trace
chemical species occur with the Earth's surface, the planetary boundary
layer (PBL) is of fundamental importance for atmospheric studies. The
pollutant concentrations at the Earth's surface are intimately linked to
their vertical distribution in the entire PBL, which in turn results from a
complex interaction between emissions and deposition at the surface, local
chemistry, horizontal advection by the wind, vertical turbulent mixing in
the PBL and exchanges with the free troposphere (FT). The vertical extent
and structure of the PBL is closely linked to turbulence. Within the
PBL, turbulence can be generated by the static instability produced by
surface heating (that induces thermals of warm air rising or the advection
of cold air masses above warm surfaces) or mechanically through the wind
shear at the surface or in the vicinity of jets (Stull, 1988).
During the development of the daytime convective PBL, air from the FT or the
residual layer (RL) is entrained into the PBL, which modifies the budget of
the chemical species (the entrainment flux acting as a source or a sink
depending on the species, the location and the time of day). The numerous
processes interacting in the PBL lead to a highly variable and complex
vertical distribution of pollution.</p>
      <p id="d1e487">Over the last decades, continuous effort was put into collecting in situ
observations in the troposphere, mainly with commercial and/or research aircraft
and sondes and to a lesser extent with instrumented mats and tethered
balloons. However, the amount of in situ data available at altitude remains
relatively low compared to the surface (both in terms of the quantity of data
and number of species). In particular, profiles throughout the entire PBL
(i.e. starting from the surface and extending to the free troposphere) are
relatively sparse. This limits our ability to properly describe and
understand how pollution is vertically distributed within the PBL. One
consequence is the difficulty of many state-of-the-art models to accurately reproduce
the vertical stratification of pollution. Although some
high-resolution chemistry–climate models (CCMs) with interactive
stratospheric and tropospheric chemistry can show encouraging results at the
episodic scale (e.g. Lin et al., 2012,
2015), several initiatives of models inter-comparison exhibited large errors
on the ozone (<inline-formula><mml:math id="M27" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) and carbon monoxide (<inline-formula><mml:math id="M28" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>) vertical distribution over
longer periods of time
(Elguindi et al., 2010; Solazzo et al., 2013). More recently,
Travis et al. (2017) highlighted the
difficulty of the GEOS-Chem chemistry–transport models (CTMs) to reproduce
sharp <inline-formula><mml:math id="M29" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> vertical gradients in the first kilometre above the surface of the
south-eastern United States (during both clear-sky and low-cloud conditions),
attributed to excessive top-down mixing in the model. Thorough knowledge
of the vertical distribution of pollutants within the PBL and at the
interface with the FT is required for conducting diagnostic evaluations of
CTMs through the entire PBL compartment, and not only at the surface.
However, a common difficulty in the evaluation of models is the fact
that several error sources may compensate for each other and therefore hide
specific model deficiencies. Such error compensations are often complex to
identify. In particular, although closely linked, both PBL heights and
pollutant concentrations (at the surface and/or along vertical profiles in
the PBL) are often evaluated separately, which limits the significance of
the drawn conclusions. For instance, a model may  reproduce the
concentrations of a specific chemical compound well at the surface but
overestimate the PBL height and/or the vertical mixing; in this case, this
would suggest that its sources are actually overestimated. A recent
diagnostic evaluation of the WRF-Chem model focusing (for the first time) on
the <inline-formula><mml:math id="M30" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> entrainment highlighted deficiencies in the model, including an
overestimation of the <inline-formula><mml:math id="M31" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> entrainment and a too-efficient vertical
mixing in the lower PBL (Kaser et al., 2017).
These deficiencies were found to originate mainly from errors in the
entrainment rate and PBL height during the morning and an erroneous
representation of the <inline-formula><mml:math id="M32" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> gradient at the PBL–FT interface during the
rest of the day.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p id="d1e557">Information relative to the measurements of the parameters used in
this study (instrument, uncertainty and period of available data).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Type</oasis:entry>
         <oasis:entry colname="col2">Parameter</oasis:entry>
         <oasis:entry colname="col3">Availability</oasis:entry>
         <oasis:entry colname="col4">Measurement technique</oasis:entry>
         <oasis:entry colname="col5">Uncertainty</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">IAGOS</oasis:entry>
         <oasis:entry colname="col2">RH</oasis:entry>
         <oasis:entry colname="col3">1994–2009</oasis:entry>
         <oasis:entry colname="col4">Capacitive hygrometer</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M38" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>5 % RH<inline-formula><mml:math id="M39" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M40" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1994–2016</oasis:entry>
         <oasis:entry colname="col4">Dual-beam UV-absorption monitor</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M41" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>2 ppbv <inline-formula><mml:math id="M42" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M43" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>2 %<inline-formula><mml:math id="M44" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M45" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">2002–2016</oasis:entry>
         <oasis:entry colname="col4">Infrared filter correlation instrument</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M46" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>5 ppbv <inline-formula><mml:math id="M47" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M48" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>5 %<inline-formula><mml:math id="M49" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Ozonesondes</oasis:entry>
         <oasis:entry colname="col2">RH</oasis:entry>
         <oasis:entry colname="col3">1994–2016</oasis:entry>
         <oasis:entry colname="col4">Capacitive humidity sensor (usually)</oasis:entry>
         <oasis:entry colname="col5">10 % RH<inline-formula><mml:math id="M50" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">d</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M51" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1994–2016</oasis:entry>
         <oasis:entry colname="col4">Electrochemical concentration cell</oasis:entry>
         <oasis:entry colname="col5">3–5 %<inline-formula><mml:math id="M52" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">e</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">Brewer–Mast</oasis:entry>
         <oasis:entry colname="col5">5–10 %<inline-formula><mml:math id="M53" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">e</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">Carbon iodine</oasis:entry>
         <oasis:entry colname="col5">5–10 %<inline-formula><mml:math id="M54" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">e</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e560"><inline-formula><mml:math id="M33" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> Helten et al. (1998); Neis et al. (2015a, b).
<inline-formula><mml:math id="M34" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> Thouret et al. (1998).
<inline-formula><mml:math id="M35" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula> Nédélec et al. (2015).
<inline-formula><mml:math id="M36" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">d</mml:mi></mml:msup></mml:math></inline-formula> Schröder et al. (2017).
<inline-formula><mml:math id="M37" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">e</mml:mi></mml:msup></mml:math></inline-formula> WMO (2011).</p></table-wrap-foot></table-wrap>

      <p id="d1e891">The general objective of this study is to derive a climatological vertical
distribution of <inline-formula><mml:math id="M55" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M56" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> over the period 1994–2016 combined with
information on the PBL. This paper focuses on these two pollutants, but some
results will also be (more briefly) discussed for relative humidity (RH) and
potential temperature (<inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. For this purpose, we benefit from the two
main sources of in situ vertical profiles in the troposphere: (i) the
In-service Aircraft for a Global Observing System (IAGOS) database and (ii) the
World Ozone and Ultraviolet Radiation Data Centre (WOUDC) ozonesondes
database. We first implement an algorithm for automatic estimation of the
PBL height from both sonde and airborne profiles. Based on these estimates
of PBL height, we derive a climatological description of the vertical
stratification of <inline-formula><mml:math id="M58" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M59" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, RH and <inline-formula><mml:math id="M60" display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula> within the PBL and at
the interface with the FT. Many studies have already provided climatological
vertical profiles of <inline-formula><mml:math id="M61" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M62" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, but most of the time simply by
averaging individual profiles regardless of whether the PBL height varies. The novel
approach developed here consists of providing climatological vertical
profiles in a vertical coordinate system based on the PBL height (hereafter
referred to as PBL-referenced vertical profiles); the altitudinal dimension
of vertical profiles is first normalized by the PBL height, and then
profiles are averaged to provide a climatological vertical distribution.
While commonly used in studies dealing with<?pagebreak page9563?> PBL dynamics
(e.g. Lilly, 2002), to our knowledge this approach has
not yet been used to derive climatological vertical profiles of chemical
compounds. The main benefit of this approach is to highlight possible
specific features in the vertical distribution that would be smoothed with a
simple average, in particular at the PBL–FT interface. An illustration is
given later in the text.</p>
      <p id="d1e970">Data and methods for estimating PBL heights are described in Sect. 2. The
climatological PBL heights are analysed in Sect. 3, and the vertical
distributions of <inline-formula><mml:math id="M63" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M64" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> and RH in Sect. 4. The Sect. 5 presents a
summary of the study and additional perspectives.
<?xmltex \hack{\vspace{-3mm}}?></p>
</sec>
<sec id="Ch1.S2">
  <title>Data and methods</title>
<sec id="Ch1.S2.SS1">
  <title>Data description</title>
<sec id="Ch1.S2.SS1.SSS1">
  <title>MOZAIC–IAGOS observations</title>
      <p id="d1e1009">In the framework of the Measurements of OZone, water vapour, carbon monoxide
and nitrogen oxides by Airbus In-service aircraft (MOZAIC) programme and its
successor the IAGOS programme, observations of the chemical composition of the
atmosphere have been routinely performed by commercial aircraft from several
airline companies since 1994 for <inline-formula><mml:math id="M65" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and RH and 2002 for <inline-formula><mml:math id="M66" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> (<uri>https://www.iagos.org/</uri>, last access: 1 December 2017) (Marenco et al., 1998; Petzold et
al., 2015). Vertical profiles of the troposphere from the ground to about
9–12 km are obtained during the ascent and descent phases. In this study, we
used the barometric altitude, temperature, pressure, calibrated RH with
respect to liquid, and <inline-formula><mml:math id="M67" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M68" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> volume mixing ratios measured on-board
IAGOS aircraft. The instruments and the period of data availability are
summarized in Table 1. In both the MOZAIC and IAGOS programmes, the same
instrument technologies are used on all aircraft. During the
2011–2012
overlapping years, inter-comparisons have been systematically performed
between MOZAIC and IAGOS, demonstrating a good consistency in the dataset
(Nédélec et al., 2015). In MOZAIC, ozone was
measured using a dual-beam UV-absorption monitor (time resolution of 4 s) with an accuracy estimated at about <inline-formula><mml:math id="M69" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>2 ppbv <inline-formula><mml:math id="M70" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M71" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>2 %
(Thouret et al., 1998), while <inline-formula><mml:math id="M72" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> was measured by an improved
infrared filter correlation instrument (time resolution of 30 s) with
a precision estimated at <inline-formula><mml:math id="M73" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>5 ppbv <inline-formula><mml:math id="M74" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M75" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>5 %
(Nédélec et al., 2003). In IAGOS, both
compounds are measured with instruments based on the same technology used
for MOZAIC, with the same estimated accuracy and the same data quality
control. In MOZAIC, RH was measured by a compact airborne humidity sensing
device using capacitive sensors (MOZAIC Capacitive Hygrometer MCH)
(Helten et al., 1998; Smit et al., 2014; Neis et al., 2015a, b). In IAGOS, RH is
measured by the IAGOS Capacitive Hygrometer (ICH), a slightly modified
version of the MCH (see Neis et al., 2015b for details). Instruments were calibrated for RH with respect
to liquid water. The absolute uncertainty on RH is estimated to <inline-formula><mml:math id="M76" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>5 % RH. A more detailed description of the IAGOS system and its validation
can be found in Nédélec et al. (2015). For
convenience, the MOZAIC and IAGOS programmes are hereafter commonly referred
to as the IAGOS programme. Although this study focuses on the period
1994–2016, it is worth noting that due to ongoing calibration and
validation of IAGOS data, all profiles are not yet available in a validated
status after 2014. The ascent and descent rates of IAGOS aircraft are
typically around 7–8 m s<inline-formula><mml:math id="M77" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the lower troposphere. Considering the
time integration of the IAGOS instruments, this leads to a vertical
resolution of around 28–32 m for <inline-formula><mml:math id="M78" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and RH and 210–240 m for <inline-formula><mml:math id="M79" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p id="d1e1145">Location of IAGOS airports and WOUDC ozonesonde stations
(restricted to 25–60<inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N).</p></caption>
            <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f01.pdf"/>

          </fig>

</sec>
<sec id="Ch1.S2.SS1.SSS2">
  <title>Ozonesonde observations</title>
      <p id="d1e1169">In addition to IAGOS data, this study uses ozonesonde observations over the
period 1994–2016. These data are publicly available on the WOUDC database
supported by Environment Canada (<uri>https://woudc.org/</uri>, last access: 21 April 2017) as part of the
Global Atmospheric Watch (GAW) programme of the World Meteorological
Organization (WMO). Ozone is measured by three main types of sensors (see
Table 1): electrochemical concentration cells (ECCs) (<inline-formula><mml:math id="M81" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 80 % of the profiles), Brewer–Mast (BM) sensors (<inline-formula><mml:math id="M82" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 10 % of
the profiles) and carbon iodine (CI) sensors (fewer than 10 % of the
profiles). The measurement uncertainties range from<?pagebreak page9564?> 3–5 % with ECC to
5–10 % with the other sensors (WMO, 2011). The response time of the
electrochemical cells of <inline-formula><mml:math id="M83" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> sondes typically ranges between 20 and 30 s
(WMO, 2011), which gives an effective vertical resolution of
100–150 m for an ascent rate around 5 m s<inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. This is a factor of 3–5
coarser than in IAGOS profiles.</p>
      <p id="d1e1212">The WOUDC profiles used in this study are performed with different types of
radiosondes (e.g. Vaisala RS80 or RS92). The performance of the RH sensors
deployed on these radiosondes depend on various factors (e.g. temperature,
RH, solar radiation, altitude, presence of clouds) such that the overall
uncertainties on RH are complex to quantify but can be estimated for the
lower troposphere to be about 10 % RH with respect to liquid water
(Schröder et al., 2017).</p>
</sec>
<sec id="Ch1.S2.SS1.SSS3">
  <title>Characteristics of airborne and sonde profiles</title>
      <p id="d1e1221">It is worth noting that the profiles obtained with balloons and in-service
aircraft are intrinsically different. The horizontal displacement of the
balloon throughout the PBL remains small, and the profile can thus be
considered as vertical. Indeed, averaged between 0 and 4 km based on all
ozonesondes available in 1994–2012, the mean ascent rate of ozonesondes is
5.6 <inline-formula><mml:math id="M85" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.9 m s<inline-formula><mml:math id="M86" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (1 standard deviation). It thus takes about 12 min for the balloon to reach 4 km of altitude. Considering a hypothetical
wind of 10 m s<inline-formula><mml:math id="M87" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in this layer, this would lead to a horizontal course
displacement of about 7 km. In comparison, the ascent–descent rates of IAGOS
aircraft are faster (and more variable): 7.3 <inline-formula><mml:math id="M88" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 2.0 m s<inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> on
average (i.e. 9 min to reach 4 km). However, the aircraft horizontal speed
is much stronger than the wind speed and increases with altitude from
about 85 m s<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> at 0–1 km to 166 m s<inline-formula><mml:math id="M91" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> at 3–4 km on average. The
horizontal displacement of IAGOS aircraft can thus be estimated to about 35 km to
reach 2 km of altitude and 70 km to reach 4 km. This issue has been
discussed for the Frankfurt airport (where the number of available vertical
profiles is the highest) in Petetin et al. (2018a). Therefore, the IAGOS profiles have to be considered as
quasi-vertical profiles. At the scale of the FT, this is less problematic
because the vertical variability is usually stronger than the horizontal
one. However, it raises more questions within the PBL where the horizontal
variability of meteorological and chemical parameters is stronger,
especially in heterogeneous terrain–surface–environment. In order to assess
how these differences influence the climatological vertical distribution of
the chemical species and meteorological parameters, comparisons of the
vertical distribution obtained with IAGOS aircraft and ozonesondes taken
separately will be provided in Sect. 4.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Data treatment</title>
      <p id="d1e1306">This study focuses on the northern mid-latitudes (25–60<inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) in order to avoid ill-defined PBL in the tropics due to
deep convection and sparse data in boreal and polar regions. In this region,
IAGOS profiles are available at 135 airports and ozonesonde profiles at 20
stations, as shown in Fig. 1. The number of profiles available over the
period 1994–2016 is 20 762 for the ozonesondes and 72 382 for IAGOS, which
represents a total of 93 144 profiles. For both IAGOS and ozonesondes, most
profiles are sampled in Europe and North America (especially in the north-eastern
United States), with a few in East Asia and the Middle East. It is worth
noting at this stage that as <inline-formula><mml:math id="M93" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M94" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios can strongly vary
from one location to the other, the PBL-referenced profiles that will be
obtained from all profiles available at northern mid-latitudes are not
expected to be representative of any location in this large latitudinal
band. As profiles often show a very complex structure, aggregating such a
large number of profiles allows for the smoothing of the vertical distribution and
subsequently highlighting specific features. The idea of this study is to
focus on the vertical stratification (i.e. the relative changes in mixing
ratios with altitude) of <inline-formula><mml:math id="M95" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M96" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> rather than their mixing ratios
themselves.</p>
      <p id="d1e1356">All profiles are expressed in metres above ground level (a.g.l.). Note that the
altitude available in the IAGOS database corresponds to the barometric
altitude above sea level (a.s.l.) estimated from the temperature and pressure
measured by the aircraft, assuming standard conditions at the surface
(temperature of 288.15 K, pressure of 1013.25 hPa). This leads to an
uncertainty on the actual altitude of the aircraft. Under some atmospheric
conditions (cyclonic conditions, for instance), the barometric altitude of
the aircraft may be below the airport elevation. Without any information on
the temperature and pressure at the surface close to the airport, it is not
possible to get a more accurate estimation of the altitude. In this study,
the altitude a.g.l. is deduced from the barometric altitude a.s.l. available in
the IAGOS database by subtracting its first value measured by the aircraft,
assuming that this first measurement of the profile is performed close to
the surface. The IAGOS measurements are indeed<?pagebreak page9565?> programmed to start when the
aircraft wheels leave (or touch) the ground. Some technical issues delaying
the beginning of the measurements may occur, but this is expected to concern
only a minor proportion of the profiles. Note that the GPS altitude has been
available in the IAGOS database only since 2014.</p>
      <p id="d1e1359">For convenience, all profiles are linearly interpolated at a vertical
resolution of 50 m from the surface (thus, this value of 50 m is to be
considered as the truncation error in our study). This value was chosen
following the sensitivity analysis on the vertical resolution (from 1 to 10 hPa, i.e. about 10 to 100 m) recently performed by Liu and
Liang (2010), who concluded that it represents a good compromise between
accuracy and uncertainty related to data noise. A sensitivity test with a
vertical resolution of 100 m (not shown) confirmed the low sensitivity of
the results to this parameter. Additionally, at any given (50 m deep) level, no
interpolation is performed when the vertical distance between the two
neighbouring points of the raw vertical profile used for the interpolation
exceeds 100 m. In this case, the data are considered missing.</p>
      <p id="d1e1362">As the PBL characteristics exhibit strong diurnal variations, profiles used
in this study are separated into different time slots: night (sunset to
sunrise), morning (sunrise to solar noon), midday (solar noon to 3 h past
solar noon), afternoon (3 h past solar noon to sunset), daytime (sunrise to
sunset) and the whole day (denoted “all” in the figures). All time zones
and daylight saving hours are properly taken into account.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <title>Estimation of PBL heights</title>
      <p id="d1e1371">Three types of PBL can be distinguished: the convective boundary layer (CBL)
often occurring during daytime and characterized by strong turbulent
mixing under the effect of convective thermals, the stable boundary layer (SBL)
occurring mainly during night-time and characterized by the absence of
turbulence mixing, and the residual layer (RL) occurring mostly during the
night and morning and corresponding to the former CBL, usually
delimitated by the SBL top and the capping inversion (Stull,
1988). In our study, for all individual profiles, we first look for any
surface-based inversion (SBI) of temperature defined as a monotonic increase
in (absolute) temperature from the surface up to a certain altitude
(corresponding to the top of the SBI). When no SBI is found, numerous
methods have been proposed over the past decades for estimating the PBL
height (see Seibert et al., 2000, for a review), including the following: (i) the elevated inversion (EI) method
in which the PBL top is located at
the bottom of an elevated (absolute) temperature inversion; (ii) methods
based on the search for an extremum of vertical gradient in the vertical
profile of a relevant thermodynamic parameter (e.g. RH, potential
temperature, refractivity); and (iii) methods in which the profile is
scanned upward in order to identify at which altitude a certain
thermodynamic parameter (e.g. virtual potential temperature, bulk Richardson
number) equalizes or exceeds by a certain amount its surface value. Strong
systematic differences in PBL height are found among these methods, both in
terms of magnitude and seasonal–diurnal variability
(e.g. Seidel et al., 2010; Wang and Wang, 2014). The
reasons for the discrepancies between the methods are complex (and not
clearly understood yet), but may comprise a poor vertical mixing of the PBL,
the strong influence of the surface measurement (specifically for the last
class of methods), the existence of clouds and/or the uncertainties on the RH
measurements under cloudy conditions (Wang and Wang, 2014). As no
consensus currently exists, we decided to retain the EI approach in which
the PBL top is estimated as the first altitude above which the (absolute)
temperature monotonically increases with altitude. The vertical gradient of
temperature between the top and the bottom of the EI corresponds to the
intensity of the inversion. We require that the difference of temperature
between the EI base and the altitude level right above exceeds the value of
0.3 K in order to avoid erroneous identification of the EI base due to
uncertainties on the temperature measurements estimated at <inline-formula><mml:math id="M97" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.25 K in
IAGOS (Berkes et al., 2017). All
profiles with no or too-weak (below 0.3 K) temperature inversion are
discarded. Two examples of profiles are presented in Fig. 2. Note that as it
relies only on temperature and not on RH measurements (that are not always
fully available over the profiles since all RH data flagged as “doubtful”
in IAGOS are rejected), the EI method allows us to maximize the number of
profiles taken into account for deriving the climatological vertical
distribution of <inline-formula><mml:math id="M98" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M99" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><caption><p id="d1e1402">Vertical profiles measured by IAGOS on 2004/11/28 (flight
no. 10275975, <bold>a</bold>) and 2004/12/22 (flight no.
10451135, <bold>b</bold>). The curves display the profiles of <inline-formula><mml:math id="M100" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (red
line) and <inline-formula><mml:math id="M101" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> (green line) mixing ratios, RH (blue line) and temperature
(black line). The plot also shows the base (dashed black line) and top
(dotted black line) of the elevated temperature inversion.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f02.pdf"/>

        </fig>

      <p id="d1e1436">Although the EI represents a real geophysical interface between two layers,
it is important to note at this stage that this height does not necessarily
always correspond to the height of the mixing layer as it may, for instance,
correspond to the capping inversion aloft of the residual layer (rather than
e.g. the top of an instable nocturnal boundary layer or a growing CBL in the
morning). For convenience, we will hereafter refer to the PBL height but the
reader should keep in mind that this term may sometimes be ambiguous.</p>
      <p id="d1e1439">Following previous studies (e.g. Seidel et al.,
2010; Wang and Wang, 2014), a maximum PBL height of 4000 m a.g.l. is fixed. In order to further avoid
erroneous PBL height estimations due to too-large data gaps in the profile,
we require at least 75 % of available data between 0 and 4000 m a.g.l. In
addition, for all PBL calculations, we require a maximum of 200 m (i.e. four
50 m deep levels) with missing data between the surface and the estimated
PBL height. Among the 93 144 profiles available, SBI and EIs are found in
16 and 63 % of the profiles, respectively. The remaining profiles
(21 %) either do not fulfil the previous criteria (due to data gaps)
and/or show no significant temperature inversion in the first 4000 m a.g.l.
and are thus discarded.</p>
</sec>
</sec>
<?pagebreak page9566?><sec id="Ch1.S3">
  <title>PBL height results</title>
      <p id="d1e1449">In this section, we analyse the climatology of the PBL heights obtained from
the IAGOS and ozonesonde profiles by distinguishing the case of SBIs (Sect. 3.1) and EIs (Sect. 3.2).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p id="d1e1454">Frequency distribution of the measurement time of all vertical
profiles (blue bars; left axis) and the profiles on which an SBI is detected
(red bars superposed over blue ones; left axis). The corresponding
proportion of SBI is also plotted (red line; right axis).</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f03.pdf"/>

      </fig>

<sec id="Ch1.S3.SS1">
  <title>Surface-based inversions (SBIs)</title>
      <p id="d1e1468">SBIs are important features for air pollution as they inhibit the vertical
mixing of pollutants released at the surface. Concerning ozone, they can
induce a strong depletion either by dry deposition or titration by the
nitrogen oxide (NO) accumulated at the surface (Colbeck and
Harrison, 1985). The distribution of the local time (LT) at which (IAGOS and
ozonesondes) profiles are measured is shown in Fig. 3 with the proportion of
SBI occurrences. Most of the available profiles are measured between 05:00
and 19:00 LT. Results highlight a strong diurnal variability in these SBIs
and their characteristics. As expected, they are the most frequent during
the night when their proportion continuously increases up to a maximum of
60 % at 03:00 LT (red curve in Fig. 3). Thus, although SBIs are more
frequent during the night, many night-time profiles still show
unstable conditions. At the locations close to large agglomerations (e.g.
airports), the absence of SBIs during the night may be partly due to the
urban heat island phenomenon that can turn a stable PBL into a near-neutral
PBL (Dupont et al., 1999). The proportion of SBIs then
progressively decreases to a broad minimum of 5–10 % between 10:00 and
17:00 LT. Very similar diurnal variations in the proportion of SBIs are
observed during all four seasons (not shown).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><caption><p id="d1e1473">SBI height (<bold>a</bold>) and temperature lapse rate between the
surface and the top of the SBI (<bold>b</bold>). Results are shown for each
season (one colour per season) and for the different time slots (adjacent
bars from left to right: night, morning, midday, afternoon, daytime,
entire day; the legend is indicated in grey on the right side). The number
of profiles for each bar is indicated on the graph.</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f04.pdf"/>

        </fig>

      <p id="d1e1488">Both the height and the temperature lapse rate (vertical gradient of
temperature between the surface and the SBI top) of these SBIs are shown
with their diurnal and seasonal variations in Fig. 4 (considering both IAGOS
and ozonesonde profiles). SBIs occur all year with almost no
seasonal variations in their frequency. This type of inversion leads to very
shallow stable layers with a mean depth of 110 m. A moderate seasonal
variability of 23 % is highlighted (as calculated as the difference
between the maximum and the minimum SBI height normalized by the annual SBI
height), with mean SBI heights ranging from 97 m in summer to 123 m<?pagebreak page9567?> in
winter. However, the diurnal variability of the SBI height is strong
(71 %), with the largest SBIs being observed during night-time (131 m on annual
average) and the smallest during midday (53 m on annual average). The
95th percentile reaches about 300 m. This is substantially lower than
the SBIs reported by Seidel et al. (2010), whose median
heights ranged around 200–500 m. Differences may be (at least partly)
due to the fact that our results are based on profiles measured at northern
mid-latitude stations (most of them being located in the latitudinal band
35–55<inline-formula><mml:math id="M102" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) essentially during daytime, while the
dataset analysed by Seidel et al. (2010) extends to
stations located further north up to polar regions and includes a
predominant proportion of night-time–morning radiosonde profiles. On average,
the temperature lapse rate is about 13 K km<inline-formula><mml:math id="M103" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, with moderate seasonal
differences (12 %). Some diurnal variations are also observed during most
seasons, with usually decreasing temperature lapse rates from night-time to
the afternoon.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Elevated temperature inversions (EIs)</title>
      <p id="d1e1518">We investigated some characteristics of the EIs, namely the temperature
difference, width and temperature vertical gradient (see Fig. S1 in the
Supplement). The difference in temperature between the base and the top of
the EIs is 1.5 K on annual average, with strong seasonal variations from 1.1
K in summer to 2.1 K in winter. The 95th percentile also exhibits
high seasonality with values ranging from 3.3 K in summer to 7.2 K in
winter. The mean width of these EIs increases from 76 m in summer to 103 m in
winter, in reasonable agreement with EI thicknesses estimated by other
authors (e.g. Cohn and Angevine, 2000). This leads to
mean temperature vertical gradients of 1.4 and 1.9 K hm<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (where hm
stands for hectometre, i.e. 100 m) during these two seasons, respectively.
Interestingly, none of these characteristics exhibits diurnal variation
(whatever the statistical metric).
<?xmltex \hack{\newpage}?></p>
      <p id="d1e1534">The seasonal and diurnal variations in the PBL height estimated with the EI
method are shown in Fig. 5 for all seasons and time slots. Averaged over all
profiles, the mean PBL height is 1253 m, with values ranging from 1132 m during
the night to 1483 m in the afternoon. This corresponds to diurnal
variability of 28 %, the diurnal variability here being calculated as the
maximum minus minimum PBL height normalized by the mean PBL height based on
the values available during the different time slots shown in Fig. 5 (for
this example (<inline-formula><mml:math id="M105" display="inline"><mml:mrow><mml:mn mathvariant="normal">1483</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1132</mml:mn></mml:mrow></mml:math></inline-formula>) <inline-formula><mml:math id="M106" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 100/1253 <inline-formula><mml:math id="M107" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 28 %). Such high night-time
values and moderate diurnal variability indicate that the EI height often
corresponds to the top of the nocturnal RL (as previously mentioned in Sect. 2.3). As expected, the diurnal variability is much lower in winter (17 %)
than in the other seasons (30–38 %). The highest PBL heights are observed
during summertime afternoon with 1707 m on average. Similarly, the seasonal
variability strongly varies with the time of day, with values of 22, 23, 32
and 35 % during the night, morning, midday and afternoon, respectively.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><caption><p id="d1e1565">Diurnal (<bold>a</bold>) and seasonal (<bold>b</bold>) variations in the
averaged PBL heights. For all combinations of season and time of day,
the number of available profiles is indicated above the box plot.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f05.pdf"/>

        </fig>

<?xmltex \hack{\vspace{-3mm}}?>
</sec>
</sec>
<sec id="Ch1.S4">
  <title>PBL-referenced vertical distribution</title>
      <?pagebreak page9568?><p id="d1e1589">In this section, we investigate the climatological vertical stratification
of two thermodynamic parameters (RH, <inline-formula><mml:math id="M108" display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula>) and two trace gases
(<inline-formula><mml:math id="M109" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M110" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>) within the PBL (estimated with the EI method) and at the
PBL–FT interface. Due to the variations in PBL height from one profile to
the other, calculating a climatological profile by simply averaging all
individual profiles inevitably smoothes all the vertical features that may
exist for some compounds or meteorological parameters, especially at the
PBL–FT interface. In order to highlight how the PBL height influences these
vertical distributions, all individual vertical profiles are thus first
expressed in a vertical coordinate system based on the PBL height and then
averaged. In practice, all individual profiles are expressed as a function
of <inline-formula><mml:math id="M111" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M112" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> the altitude and <inline-formula><mml:math id="M113" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula> the PBL height estimate, with <inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> ranging from 0 to
2 (in bins of 0.05). For instance, if the PBL height on a specific profile
is 1000 m, the resampled profile will extend from 0 to 2000 m (with bins
of 50 m). Hereafter, this type of vertical profile is denominated as a
PBL-referenced vertical profile. Then, all these PBL-referenced profiles are
averaged to derive a climatological vertical distribution apart from the
PBL–FT interface. Hereafter, the PBL–FT interface will be designated by the
<inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula>1 altitude level (which means that the entrainment zone is here included
in the FT).</p>
      <p id="d1e1671">In order to illustrate the usefulness of this approach, we consider an
artificial dataset of vertical profiles characterized by the presence of a
discontinuity at the PBL top (<inline-formula><mml:math id="M116" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula>), here arbitrarily chosen as a step function
with different but constant mixing ratios below (<inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and above
(<inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> this interface. A dataset of 50 profiles is generated by choosing
random integers between 10 and 30 ppbv for <inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, between 20 and 40 ppbv
for <inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, and between 100 and 1500 m for <inline-formula><mml:math id="M121" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula>. All these profiles are
superposed in grey in Fig. 6a, including one individual
example in black (for which <inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula>15 ppbv, <inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula>38 ppbv and
<inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mi>h</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 1200 m). In such a dataset, the mean vertical distribution (red curve in panel a) is characterized by an overall
increase in the mixing ratios
with altitude (up to 1500 m, the upper bound fixed in this example). The
discontinuity introduced in all individual profiles is entirely smoothed in
this mean profile, as shown by the gradient profile (red curve in panel b). If all these profiles are first normalized by the PBL height (grey
curves in panel c) and then averaged (blue curve), the
discontinuity of the mixing ratios is preserved, as clearly shown by the
PBL-referenced gradient profile (panel d). For comparison with
the traditional profiles, both the PBL-referenced profile and gradient profile
were dilated using the mean PBL of this dataset (about 900 m in this
example) and added to the first series of plots (blue curves in top panels).
Considering PBL-reference profiles thus allows us to investigate the features
(or in other words, any kind of discontinuity) that may exist at the PBL
top.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><caption><p id="d1e1775">Artificial vertical profiles (<bold>a, c</bold>) and gradient profiles
(<bold>b, d</bold>) expressed as a function of <inline-formula><mml:math id="M125" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> (<bold>a, b</bold>) and <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula>
(<bold>c, d</bold>). The figure shows all individual profiles (grey lines), one
example of an individual profile (black line), the <inline-formula><mml:math id="M127" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>-referenced mean profile
(red line) and the PBL-referenced profile (blue line), and the mean PBL
height of this artificial dataset (blue dotted line; see text for details).</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f06.pdf"/>

      </fig>

      <p id="d1e1823">Only complete profiles (i.e. with available data at all <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> from 0 to 2) are
averaged together. This is an important restriction which limits the number
of profiles but ensures the most reliable vertical distribution when
averaged. Note that we tested to fill the small data gaps (width up to 100 m included) by interpolation using natural cubic splines. As this only
increases the number of profiles by about 10 % (which means that the data
gaps are usually larger than 100 m) and does not change the climatological
results, we decided to not use any interpolation to fill the data gaps in
the profiles. The number of complete profiles is finally 43 244 for the
potential temperature, 17 649 for RH, 30 960 for <inline-formula><mml:math id="M129" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and 8295 for <inline-formula><mml:math id="M130" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <?pagebreak page9569?><p id="d1e1858">In the following sections, the PBL-references profiles are presented for
<inline-formula><mml:math id="M131" display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula> (Sect. 4.1), RH (Sect. 4.2), <inline-formula><mml:math id="M132" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> (Sect. 4.3) and <inline-formula><mml:math id="M133" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (Sect. 4.4) based on the profiles on which an EI is identified. Mean profiles will
be shown for the different seasons and time slots. However, it is worth
noting that the climatological profiles at the different time slots are not
directly comparable with each other since they are calculated based on
profiles sampled at different periods and locations. The profiles of (local)
vertical gradients will also be analysed. Note that for all variables
discussed in Sect. 4 (<inline-formula><mml:math id="M134" display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula>, RH or mixing ratios), these profiles of
vertical gradients will be expressed in the common unit of the variable
(<inline-formula><mml:math id="M135" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C,  % or ppbv) per hectometre (hm<inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> as it keeps most
numbers in the range of 0.1–10.</p>
<sec id="Ch1.S4.SS1">
  <title>Potential temperature</title>
      <p id="d1e1924">The PBL-referenced profiles of potential temperature in the absence of SBI
(and in the presence of an EI) are shown in Fig. 7. On average, the
potential temperature is found to be slightly superadiabatic in the surface
layer (i.e. <inline-formula><mml:math id="M137" display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula> decreases with altitude) during both morning
(<inline-formula><mml:math id="M138" display="inline"><mml:mo lspace="0mm">-</mml:mo></mml:math></inline-formula>0.08 <inline-formula><mml:math id="M139" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C hm<inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and midday (<inline-formula><mml:math id="M141" display="inline"><mml:mo lspace="0mm">-</mml:mo></mml:math></inline-formula>0.13 <inline-formula><mml:math id="M142" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C hm<inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>.
The width of this superadiabatic layer never exceeds 5–10 % of the PBL
height.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p id="d1e1999">Vertical profiles of potential temperature (in <inline-formula><mml:math id="M144" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C; <bold>a, d, g, j, m, q</bold>); the
same profiles normalized by the potential temperature at <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 1
(<bold>b, e, h, k, n, r</bold>) and vertical gradient profiles (in <inline-formula><mml:math id="M146" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C hm<inline-formula><mml:math id="M147" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>;
<bold>c, f, i, l, o, s</bold>). Plots are shown for different time slots (from top to bottom:
all day, daytime, night-time, morning, midday, afternoon). The shaded
area represents the uncertainties (at a 95 % confidence level) on the
mean. For each season and time of day, we indicate the number (<inline-formula><mml:math id="M148" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula>) of
profiles used for calculating the PBL-referenced profile (i.e. profiles
without any missing data) and the mean PBL height calculated based on this
subset of profiles.</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f07.pdf"/>

        </fig>

      <p id="d1e2069">Above that surface layer, the potential temperature increases with altitude.
While neutral adiabatic profiles (i.e. no variations in <inline-formula><mml:math id="M149" display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula> with
altitude) were expected within the convective PBL, at least during daytime
(Stull, 1988), all climatological profiles appear subadiabatic
(positive vertical gradient of <inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. This subadiabatism varies with
the season with strongest values in spring–winter (0.51 <inline-formula><mml:math id="M151" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C hm<inline-formula><mml:math id="M152" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> on average over the PBL) and lowest values in summer
(0.25 <inline-formula><mml:math id="M153" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C hm<inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. As expected, a very sharp increase in the
potential temperature is highlighted at the top of the PBL where vertical
gradients reach <inline-formula><mml:math id="M155" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>1.3 <inline-formula><mml:math id="M156" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C hm<inline-formula><mml:math id="M157" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> on average. This maximum
gradient is found to be much higher in winter (<inline-formula><mml:math id="M158" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>1.6 <inline-formula><mml:math id="M159" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C hm<inline-formula><mml:math id="M160" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> than in summer (<inline-formula><mml:math id="M161" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>1.1 <inline-formula><mml:math id="M162" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C hm<inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, as previously
analysed (see Sect. 3.2). These seasonal variations are the strongest during
the afternoon (<inline-formula><mml:math id="M164" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>1.8 and <inline-formula><mml:math id="M165" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>1.0 <inline-formula><mml:math id="M166" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C hm<inline-formula><mml:math id="M167" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in winter and
summer, respectively). Above, in the lower FT, the increase in temperature
with altitude is reduced but remains higher than in the PBL.</p>
      <p id="d1e2262">As mentioned in Sect. 2.1, several important differences of sampling exist
between these two datasets, including the fact that (i) IAGOS aircraft fly at a 30 %
higher descent–ascent rate and cover a horizontal distance 10 times larger
in the lower troposphere, and (ii) IAGOS measurements are performed in the
vicinity of international airports and large agglomerations, while
ozonesonde stations are usually located in remote, rural or low-density
urban areas (leading to a population density around IAGOS airports of about
2000 inhabitants km<inline-formula><mml:math id="M168" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> on average within <inline-formula><mml:math id="M169" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.1<inline-formula><mml:math id="M170" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> in
longitude and latitude against about 1150 inhabitants km<inline-formula><mml:math id="M171" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for
ozonesonde stations; see Sect. S1 in the Supplement for details). This
raises the question of whether or not these sampling differences impact the
PBL-referenced vertical distribution. Answering this question would require
collocated (in time and space) IAGOS and ozonesonde profiles, but far too
few profiles fulfil these conditions. However, in order to give some
insights about this question, we calculated the climatological<?pagebreak page9570?> profiles from
both datasets taken separately (Fig. 8). Only daytime profiles are shown as
ozonesondes and are much sparser during the night. Again, these PBL-referenced
profiles obtained with IAGOS and ozonesondes are not expected to be the same
since they are sampled in different locations and times and thus correspond
to different PBL heights; considering the profiles used in Fig. 8, the mean
PBL height is 10–20 % higher in ozonesondes than in IAGOS profiles
depending on the season.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p id="d1e2308">IAGOS and ozonesonde PBL-referenced (<bold>a, b</bold>) and normalized
profiles (<bold>c, d</bold>) of daytime potential temperature. The number of
profiles accounted for is indicated for each season (in brackets: IAGOS <inline-formula><mml:math id="M172" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SONDE).</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f08.pdf"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><caption><p id="d1e2332">Same as Fig. 7 for RH (in %).</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f09.pdf"/>

        </fig>

      <?pagebreak page9571?><p id="d1e2341">Results obtained using both datasets are in reasonable agreement. The main
difference is found near the surface where only ozonesondes highlight a
small superadiabatism. This may be partly due to the fact that in contrast
to ozonesondes, IAGOS measurements do not start at the surface but at a
minimum height of a few metres a.g.l. (since instruments are located in the
lower part of the fuselage). However, as individual IAGOS profiles sometimes
do show a superadiabatism at the surface, the main reason is more likely
related to the inherent uncertainties of the IAGOS barometric altitude, which
is deduced from the pressure assuming standard atmospheric conditions at the
surface (as explained in Sect. 2.2). This may partly smooth the
superadiabatism at the surface (as the mean potential temperature
in the first 0–50 m altitude level would include some points actually
outside the 0–50 m layer and/or ignore some other points actually belonging
to this layer). At the annual scale, considering all time slots and <inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> levels,
the mean bias (MB), root mean square error (RMSE) and correlation (<inline-formula><mml:math id="M174" display="inline"><mml:mi>R</mml:mi></mml:math></inline-formula>)
between the PBL-referenced profiles of both datasets are 2 <inline-formula><mml:math id="M175" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C,
3 <inline-formula><mml:math id="M176" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and 0.97, respectively (with ozonesondes here taken as the
reference).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10" specific-use="star"><caption><p id="d1e2383">IAGOS and ozonesonde PBL-referenced (<bold>a, b</bold>) and
normalized profiles (<bold>c, d</bold>) of daytime RH. The number of profiles
accounted for is indicated for each season (in brackets: IAGOS <inline-formula><mml:math id="M177" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SONDE).</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f10.pdf"/>

        </fig>

</sec>
<sec id="Ch1.S4.SS2">
  <title>Relative humidity</title>
      <p id="d1e2411">The PBL-referenced profiles of RH are shown in Fig. 9. At the surface, the
mean RH ranges between 55 and 80 % with a well-known seasonal and diurnal
pattern characterized by<?pagebreak page9572?> highest values during the wintertime nights and
lowest values during the springtime–summertime afternoons. As one moves
higher in altitude, RH increases quite regularly up to a maximum located
around <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.8, which is thus just below the top of the PBL. At this level, RH values
range between 70 and 85 %. The seasonal differences persist but the
diurnal ones are greatly reduced (the absolute difference between the
night-time maximum and the afternoon minimum remains below 10 %). A sharp
decrease in RH is observed at the PBL–FT interface. The vertical gradient
reaches its minimum right above the PBL top (at <inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 1.05) with <inline-formula><mml:math id="M180" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>12 % hm<inline-formula><mml:math id="M181" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> on average. The diurnal and seasonal variability of these
strongest RH gradients remains low (between <inline-formula><mml:math id="M182" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>11 and <inline-formula><mml:math id="M183" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>15 % hm<inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. In
the lower FT, RH decreases with altitude, usually with stronger (negative)
gradients in winter than in summer.</p>
      <p id="d1e2491">The PBL-referenced vertical profiles of RH obtained with IAGOS and
ozonesondes taken separately are shown in Fig. 10. Although the shape of the
profiles remains in reasonable agreement, some differences are highlighted.
In particular, ozonesondes show a stronger RH vertical gradient within the
PBL and a sharper decrease in the lowermost FT with much lower RH in the FT.
This sharper decrease above the PBL top might be due to the fact that, as
briefly mentioned in Sect. 2.1.2, RH measurements with radiosondes are
generally affected by a radiation dry bias due to the heating of the sensors
by solar radiation, which can lead to a negative bias on the RH
measurements of the order of 5–10 % in the lower troposphere
(e.g. Vömel et al., 2007; Bian et al., 2011; Wang et al., 2013). In our case, this bias
could be further enhanced in the lower FT due to solar reflection by clouds
at the top of the PBL. This is also supported by the fact that the differences
between IAGOS and sondes are largely reduced when considering only night-time
profiles, i.e. when radiosonde measurements are not affected by heating
effects due to solar radiation (not shown). These sources of bias are also
expected to vary from one season to the other following the seasonality of
solar radiation that is strongest in spring–summer and lowest in
winter–fall. This may (at least partly) explain the distortion of the
seasonal variations of RH in ozonesondes compared to IAGOS in the lower free
troposphere. At the annual scale, taking into account all time slots and
<inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> levels and considering ozonesondes as the reference, the comparison between
IAGOS and ozonesonde datasets gives MB, RMSE and <inline-formula><mml:math id="M186" display="inline"><mml:mi>R</mml:mi></mml:math></inline-formula> of <inline-formula><mml:math id="M187" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0 %, 9 %
and 0.67, respectively.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <title>Carbon monoxide</title>
      <p id="d1e2526">The PBL-referenced profiles of <inline-formula><mml:math id="M188" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> are shown in Fig. 11. The uncertainties of
these mean profiles are substantially higher than for the previous
meteorological parameters, notably due to a much lower number of measurements
(as <inline-formula><mml:math id="M189" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> is only measured by IAGOS aircraft and starting from 2002).
Considering all profiles, the mean <inline-formula><mml:math id="M190" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios at the surface increase
from about 240 ppbv in summer to 340 ppbv in winter. The <inline-formula><mml:math id="M191" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios
decrease with altitude at a varying rate depending on the altitude. The
normalized profiles (Fig. 11b, e, h, k, n, r) show that the difference
in
<inline-formula><mml:math id="M192" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> between the surface and the PBL top reaches a factor of 1.3 on average. The
first important result shown by these PBL-referenced profiles is therefore
the substantial vertical stratification of <inline-formula><mml:math id="M193" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios within the PBL.</p>
      <p id="d1e2578">In order to investigate that stratification on a quantitative basis, we
introduce a first factor of vertical stratification (<inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> here defined
as the standard deviation of the mixing ratio profile between the surface
and the PBL top (i.e. over the 21 <inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> levels comprised between 0 to 1)
normalized by the mean. We also define a second factor of vertical
stratification (<inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> calculated by normalizing <inline-formula><mml:math id="M197" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula> by the PBL
height. The calculations are first done on each individual profile and then
averaged over all profiles. The <inline-formula><mml:math id="M198" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M199" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> factors will be
expressed in % and % hm<inline-formula><mml:math id="M200" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively. Results are reported in
Table 2 for the different seasons and time slots. On average, the <inline-formula><mml:math id="M201" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula>
factor of <inline-formula><mml:math id="M202" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> vertical stratification is 11 % and varies little with the
season and time of day (from 8 to 12 %), the strongest values usually being
found in winter–fall. The <inline-formula><mml:math id="M203" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> factor exhibits relatively
stronger variations, with values ranging from <inline-formula><mml:math id="M204" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1 % hm<inline-formula><mml:math id="M205" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> during summer midday to more than <inline-formula><mml:math id="M206" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2 % hm<inline-formula><mml:math id="M207" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
during winter–fall night.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11" specific-use="star"><caption><p id="d1e2710">Same as Fig. 7 for <inline-formula><mml:math id="M208" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios (in ppbv).</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f11.pdf"/>

        </fig>

      <p id="d1e2727">The strongest vertical gradients are observed at the PBL top and close to
the surface. At the PBL top, the strong vertical gradients involve the
presence of a clear inflexion point in the mean <inline-formula><mml:math id="M209" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> profile (as shown by
gradient profiles in the<?pagebreak page9573?> right panels of Fig. 11). With a traditional
vertical coordinate system (i.e. <inline-formula><mml:math id="M210" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> rather than <inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, this feature would have
been smoothed (see Fig. 6). The presence of this inflexion point on an
independent variable (i.e. a variable not used in the estimation of the PBL
height) gives confidence in our ability to capture reasonably well a real
geophysical interface with the EI approach. It illustrates the fact that as
expected, EIs act as an effective although porous geophysical barrier that
limits the vertical exchanges between the PBL and FT, leading to a distinct
chemical composition on each side. The sharp gradients at the PBL–FT
interface are strongest in winter and lowest in summer. Such seasonal
variations are consistent with the fact that EIs are deeper and
characterized by a stronger temperature gradient in winter than in summer
(as previously shown in Sect. 3.2), which greatly inhibits the ventilation
of the polluted PBL and the exchanges with the cleaner FT. The strong
gradients at the surface ensue from the presence of <inline-formula><mml:math id="M212" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> emissions and are
usually maximum during night-time and morning. Substantially lower vertical
gradients are found in the FT.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><caption><p id="d1e2771">Factors of vertical stratification <inline-formula><mml:math id="M213" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula> (in  %) and <inline-formula><mml:math id="M214" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula>
(in % hm<inline-formula><mml:math id="M215" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; in brackets) of <inline-formula><mml:math id="M216" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M217" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> in the PLB for the
different seasons and time slots (see text for details on their
calculation).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="8">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:thead>
       <oasis:row>

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry namest="col3" nameend="col8" align="center">Time of day </oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1">Species</oasis:entry>

         <oasis:entry colname="col2">Season</oasis:entry>

         <oasis:entry colname="col3">Night</oasis:entry>

         <oasis:entry colname="col4">Morning</oasis:entry>

         <oasis:entry colname="col5">Midday</oasis:entry>

         <oasis:entry colname="col6">Afternoon</oasis:entry>

         <oasis:entry colname="col7">Daytime</oasis:entry>

         <oasis:entry colname="col8">All</oasis:entry>

       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="4"><inline-formula><mml:math id="M218" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col2">Winter</oasis:entry>

         <oasis:entry colname="col3">10 (2.1)</oasis:entry>

         <oasis:entry colname="col4">11 (1.5)</oasis:entry>

         <oasis:entry colname="col5">11 (1.7)</oasis:entry>

         <oasis:entry colname="col6">12 (1.7)</oasis:entry>

         <oasis:entry colname="col7">11 (1.6)</oasis:entry>

         <oasis:entry colname="col8">11 (1.8)</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">Spring</oasis:entry>

         <oasis:entry colname="col3">9 (1.2)</oasis:entry>

         <oasis:entry colname="col4">10 (1.8)</oasis:entry>

         <oasis:entry colname="col5">8 (1.3)</oasis:entry>

         <oasis:entry colname="col6">10 (1.6)</oasis:entry>

         <oasis:entry colname="col7">9 (1.6)</oasis:entry>

         <oasis:entry colname="col8">9 (1.5)</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">Summer</oasis:entry>

         <oasis:entry colname="col3">10 (1.6)</oasis:entry>

         <oasis:entry colname="col4">11 (1.7)</oasis:entry>

         <oasis:entry colname="col5">10 (1.1)</oasis:entry>

         <oasis:entry colname="col6">11 (1.6)</oasis:entry>

         <oasis:entry colname="col7">11 (1.6)</oasis:entry>

         <oasis:entry colname="col8">11 (1.6)</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">Fall</oasis:entry>

         <oasis:entry colname="col3">12 (2.3)</oasis:entry>

         <oasis:entry colname="col4">11 (1.7)</oasis:entry>

         <oasis:entry colname="col5">11 (1.4)</oasis:entry>

         <oasis:entry colname="col6">12 (1.4)</oasis:entry>

         <oasis:entry colname="col7">11 (1.5)</oasis:entry>

         <oasis:entry colname="col8">11 (1.8)</oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">Annual</oasis:entry>

         <oasis:entry colname="col3">11 (1.9)</oasis:entry>

         <oasis:entry colname="col4">11 (1.7)</oasis:entry>

         <oasis:entry colname="col5">10 (1.4)</oasis:entry>

         <oasis:entry colname="col6">11 (1.6)</oasis:entry>

         <oasis:entry colname="col7">10 (1.6)</oasis:entry>

         <oasis:entry colname="col8">11 (1.7)</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1" morerows="4"><inline-formula><mml:math id="M219" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col2">Winter</oasis:entry>

         <oasis:entry colname="col3">25 (7.0)</oasis:entry>

         <oasis:entry colname="col4">21 (5.5)</oasis:entry>

         <oasis:entry colname="col5">18 (3.3)</oasis:entry>

         <oasis:entry colname="col6">21 (3.8)</oasis:entry>

         <oasis:entry colname="col7">20 (4.5)</oasis:entry>

         <oasis:entry colname="col8">21 (5.3)</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">Spring</oasis:entry>

         <oasis:entry colname="col3">15 (6.1)</oasis:entry>

         <oasis:entry colname="col4">16 (4.8)</oasis:entry>

         <oasis:entry colname="col5">10 (1.3)</oasis:entry>

         <oasis:entry colname="col6">11 (2.0)</oasis:entry>

         <oasis:entry colname="col7">13 (3.4)</oasis:entry>

         <oasis:entry colname="col8">14 (3.9)</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">Summer</oasis:entry>

         <oasis:entry colname="col3">17 (7.3)</oasis:entry>

         <oasis:entry colname="col4">17 (5.7)</oasis:entry>

         <oasis:entry colname="col5">11 (1.4)</oasis:entry>

         <oasis:entry colname="col6">11 (1.9)</oasis:entry>

         <oasis:entry colname="col7">14 (4.1)</oasis:entry>

         <oasis:entry colname="col8">15 (4.8)</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">Fall</oasis:entry>

         <oasis:entry colname="col3">26 (9.7)</oasis:entry>

         <oasis:entry colname="col4">22 (6.9)</oasis:entry>

         <oasis:entry colname="col5">17 (2.8)</oasis:entry>

         <oasis:entry colname="col6">18 (2.7)</oasis:entry>

         <oasis:entry colname="col7">20 (4.9)</oasis:entry>

         <oasis:entry colname="col8">21 (6.1)</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">Annual</oasis:entry>

         <oasis:entry colname="col3">22 (7.6)</oasis:entry>

         <oasis:entry colname="col4">19 (5.7)</oasis:entry>

         <oasis:entry colname="col5">14 (2.2)</oasis:entry>

         <oasis:entry colname="col6">16 (2.6)</oasis:entry>

         <oasis:entry colname="col7">17 (4.2)</oasis:entry>

         <oasis:entry colname="col8">18 (5.1)</oasis:entry>

       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S4.SS4">
  <title>Ozone</title>
<sec id="Ch1.S4.SS4.SSS1">
  <?xmltex \opttitle{PBL-referenced vertical distribution of {$\protect\chem{O_{{3}}}$}}?><title>PBL-referenced vertical distribution of <inline-formula><mml:math id="M220" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></title>
      <?pagebreak page9574?><p id="d1e3179">Figure 12 presents the mean PBL-referenced profiles of <inline-formula><mml:math id="M221" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in which all
profiles sampled at northern mid-latitude stations are aggregated. It is
worth noting that both the surface mixing ratio and vertical distribution of
<inline-formula><mml:math id="M222" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are highly variable in both time and space and can greatly change
depending on the meteorological conditions and the availability of <inline-formula><mml:math id="M223" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
precursors. At the scale of individual profiles, the <inline-formula><mml:math id="M224" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> vertical
distribution is often very complex with persistent layering. In our study,
taking into account a very large number of profiles allows us to obtain well-smoothed PBL-referenced profiles (Fig. 12) with low layering and therefore
to highlight some general background characteristics of the <inline-formula><mml:math id="M225" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> vertical
stratification in the lower troposphere.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12" specific-use="star"><caption><p id="d1e3239">Same as Fig. 7 for <inline-formula><mml:math id="M226" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratios (in ppbv).</p></caption>
            <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f12.pdf"/>

          </fig>

      <p id="d1e3259">On average over all profiles, surface <inline-formula><mml:math id="M227" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratios range between 20 ppbv
in winter–fall and 30–35 ppbv in spring–summer. Above the surface, the
<inline-formula><mml:math id="M228" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratios increase with altitude through the whole PBL and the
lower FT with vertical gradients displaying strong variations depending on
the season and altitude (relatively to the PBL top). As for <inline-formula><mml:math id="M229" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, the
strongest gradients are observed both close to the surface and at the PBL–FT
interface. Close to the surface, they are likely explained by the strong
intensity of the main <inline-formula><mml:math id="M230" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> sinks, namely dry deposition and titration by
the NO emitted by anthropogenic emission sources. The combination of these
two sinks leads to sharper vertical gradients for <inline-formula><mml:math id="M231" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> than for <inline-formula><mml:math id="M232" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>
(relatively to mixing ratios). The maximum vertical gradient at the surface is
observed during the night (around 3 ppbv hm<inline-formula><mml:math id="M233" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. The rate of <inline-formula><mml:math id="M234" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
increase with altitude slightly decreases with altitude in the PBL. A clear
inflexion point is highlighted at the interface between the PBL and FT
(<inline-formula><mml:math id="M235" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 1). Compared to <inline-formula><mml:math id="M236" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, this inflexion point in <inline-formula><mml:math id="M237" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> profiles is usually
much sharper. Such a difference suggests that, (i) while the smooth <inline-formula><mml:math id="M238" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>
inflexion point mostly results from the limited vertical exchanges between
the PBL and FT in the presence of the EI, (ii) the stronger <inline-formula><mml:math id="M239" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> inflexion
point is not only due to this dynamical effect but also to a difference in
chemical regime apart from the PBL–FT interface. In other words, results
suggest that the <inline-formula><mml:math id="M240" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> inflexion point is mostly driven by dynamics (since the
<inline-formula><mml:math id="M241" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> chemical reactivity is low), while the <inline-formula><mml:math id="M242" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> inflexion point is driven
by both dynamics and chemistry. The vertical gradient at the PBL top is
found to strongly vary with the season with the sharpest increase in winter
and a much smoother increase in summer. While this strong gradient persists
all day in winter, it is found to be lower in midday–afternoon during
summertime. This is likely due to the combined effect of the efficient
photochemical production of <inline-formula><mml:math id="M243" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in the PBL and the entrainment of
<inline-formula><mml:math id="M244" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>-rich air masses from the FT. The entrainment can indeed play a
strong role in the <inline-formula><mml:math id="M245" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> budget within the PBL, comparable to advection or
deposition, as recently highlighted by Trousdell
et al. (2016). Higher in altitude in the lower FT, the increase in <inline-formula><mml:math id="M246" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
mixing ratio with altitude is found to be substantially smaller than in the
PBL.</p>
      <p id="d1e3475">Based on 214 aircraft vertical profiles obtained during the DIS<inline-formula><mml:math id="M247" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>VER-AQ
(Deriving Information on Surface conditions from Column and Vertically
Resolved Observations Relevant to Air Quality) and the FRAPPÉ (Front
Range Air Pollution and Photochemistry Éxperiment) campaigns in Colorado
during summer 2014, Kaser et al. (2017)
recently investigated the <inline-formula><mml:math id="M248" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> vertical gradient between the PBL and the
lower FT in order to estimate this <inline-formula><mml:math id="M249" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> entrainment in the PBL and to
evaluate its representation in the WRF-Chem model. The difference in <inline-formula><mml:math id="M250" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
mixing ratio between the PBL and the (arbitrary chosen) 300 m wide layer
above the PBL top was found to vary from <inline-formula><mml:math id="M251" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>9 ppbv in the morning to <inline-formula><mml:math id="M252" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>11 ppbv in the afternoon (the negative value meaning that higher <inline-formula><mml:math id="M253" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing
ratios are measured in the PBL). This differs from our climatological
results in which the summertime <inline-formula><mml:math id="M254" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> vertical gradients at the PBL–FT
interface also decrease from the morning (2.5 ppbv hm<inline-formula><mml:math id="M255" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> to the
afternoon (0.9 ppbv hm<inline-formula><mml:math id="M256" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> but remain positive (i.e. <inline-formula><mml:math id="M257" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing
ratios in the FT remain higher than in the PBL). However, if we consider
only the ozonesonde profiles at Boulder, Colorado (i.e. in the same region
where the DIS<inline-formula><mml:math id="M258" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>VER-AQ campaign took place), our results show a summertime
vertical gradient of <inline-formula><mml:math id="M259" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> at the PBL–FT interface close to zero during
the late morning and negative at midday (see Fig. S1 in the Supplement),
thus in good agreement with Kaser et al. (2017). This suggests that our climatology may not be representative of the
most polluted regions during <inline-formula><mml:math id="M260" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> pollution episodes. Our study also
agrees with Kaser et al. (2017) on the fact
that, even at daytime during summer (when the vertical turbulent mixing is
expected to be the strongest), a strong vertical stratification of <inline-formula><mml:math id="M261" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
mixing ratios persists in the lower part of the PBL (the first few hundred metres).</p>
      <?pagebreak page9575?><p id="d1e3639">As mentioned at the beginning of this section, comparing the climatological
profiles at the different time slots is tricky since they are partly based
on profiles sampled at different locations. However, in terms of diurnal
variations in <inline-formula><mml:math id="M262" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, the 18 years of IAGOS profiles available at the
Frankfurt airport have already been used to demonstrate the clear decrease
in diurnal variability with altitude (Petetin
et al., 2016).</p>
      <p id="d1e3653">In terms of vertical stratification within the PBL, the <inline-formula><mml:math id="M263" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula> and
<inline-formula><mml:math id="M264" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> factors for <inline-formula><mml:math id="M265" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are given in Table 2. Considering all
profiles, the mean vertical stratification of <inline-formula><mml:math id="M266" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in the PBL is 18 %
(or 5 % hm<inline-formula><mml:math id="M267" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. It ranges from <inline-formula><mml:math id="M268" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 10 % (<inline-formula><mml:math id="M269" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 1 % hm<inline-formula><mml:math id="M270" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> in spring–summer midday–afternoon to <inline-formula><mml:math id="M271" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 25 %
(7–10 % hm<inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> in winter–fall night. This is consistent with a
stronger vertical mixing within the PBL associated with higher thermal
instability in the PBL under sunny conditions. In order to investigate the
influence of meteorological conditions, both stratification factors are
calculated for different ranges of surface potential temperature (from <inline-formula><mml:math id="M273" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>10
to <inline-formula><mml:math id="M274" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>35 <inline-formula><mml:math id="M275" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, with bins of 5 <inline-formula><mml:math id="M276" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) considering only daytime
profiles (Fig. 13a, b). For comparison, results are also shown for
<inline-formula><mml:math id="M277" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> (c, d). Note that whatever the season, computing the weighted
average of the curve shown in Fig. 13 with weights taken as the number of
profiles available at each potential temperature interval allows us to retrieve
the mean (daytime) <inline-formula><mml:math id="M278" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula> factors given in Table 2.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13" specific-use="star"><caption><p id="d1e3809">Daytime factors of vertical stratification as a function of
surface potential temperature. Results are shown for <inline-formula><mml:math id="M279" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (<bold>a, b</bold>)
and <inline-formula><mml:math id="M280" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> (<bold>c, d</bold>) and for both <inline-formula><mml:math id="M281" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula> (in %; <bold>a, c</bold>) and
<inline-formula><mml:math id="M282" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> (in % hm<inline-formula><mml:math id="M283" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; <bold>b, d</bold>). The shaded area represents the
uncertainties (at a 95 % confidence level) on the mean. The curves at the
top of the graph show the number of profiles taken into account (the highest number of profiles is indicated by the arrow).</p></caption>
            <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f13.pdf"/>

          </fig>

      <?pagebreak page9576?><p id="d1e3876">In contrast to <inline-formula><mml:math id="M284" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> vertical stratification factors that do not show clear
variations with the surface potential temperature, <inline-formula><mml:math id="M285" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> results highlight
an interesting bell shape. The weakest <inline-formula><mml:math id="M286" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> vertical stratification is
observed not only at high potential temperatures (above 30 <inline-formula><mml:math id="M287" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C,
when turbulence is expected to be strong due to the heating of the surface),
but also at low (typically negative) potential temperatures, while the strongest
stratification is observed at intermediate potential temperatures. This
behaviour is observed during all seasons (except summer when temperatures
remain high enough). During wintertime, a relatively well-mixed <inline-formula><mml:math id="M288" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
profile with moderate mixing ratios is, for instance, frequently observed at
stations in northern North America (e.g. Goose Bay, Yarmouth, Churchill).
Note that this decrease in the vertical stratification is not due to much
lower <inline-formula><mml:math id="M289" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratios at the surface (the denominator in the <inline-formula><mml:math id="M290" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula>
and <inline-formula><mml:math id="M291" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> formulas) since the latter also follows an (inversed) bell
shape with a decrease from 23 to 17 ppbv between <inline-formula><mml:math id="M292" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>10 and 0 <inline-formula><mml:math id="M293" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and
an increase up to 48 ppbv at 30 <inline-formula><mml:math id="M294" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (see the density scatter plot
of <inline-formula><mml:math id="M295" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratios versus surface potential temperature in Fig. S2 in
the Supplement). Similarly, low standard deviations in <inline-formula><mml:math id="M296" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> profiles within
the PBL (the numerator in the <inline-formula><mml:math id="M297" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M298" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> formulas) are usually
found when potential temperatures are negative. The weaker vertical
stratification at lower surface potential temperatures illustrates the fact
that although this last parameter alone could somehow be a relevant proxy for
the static instability within the PBL, the vertical homogeneity of the
<inline-formula><mml:math id="M299" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> pollution in this layer is also driven by other mechanisms (e.g.
wind, clouds, snow), especially under cold conditions. Concerning the
influence of snow, although still very uncertain, much lower <inline-formula><mml:math id="M300" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
deposition rates have been reported in the literature over snow compared to
vegetation due to the low reactivity of <inline-formula><mml:math id="M301" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in pure water
(e.g. Stocker et al., 1995; Wesely et al., 1981; Helmig et al., 2007). This could at least partly
explain the weaker <inline-formula><mml:math id="M302" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> vertical stratification under low negative
surface potential temperatures (while such bell shapes are not observed with
<inline-formula><mml:math id="M303" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> for which no deposition sink exists), although dedicated studies are
obviously required for investigating in more detail the reasons for such a
behaviour.</p>
</sec>
<sec id="Ch1.S4.SS4.SSS2">
  <title>Comparison between IAGOS and ozonesonde profiles</title>
      <p id="d1e4076">As for the previous meteorological parameters and chemical species, we now
investigate how the PBL-referenced profiles obtained from IAGOS and ozonesondes
are comparable. The climatological profiles from both datasets taken
separately are compared in Fig. 14, considering only daytime profiles. As
expected, some quantitative differences in <inline-formula><mml:math id="M304" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratios are found
between the datasets likely due to their different spatio-temporal
distribution at the northern mid-latitudes (IAGOS showing lower mixing
ratios). However, the normalized profiles highlight a consistent vertical
structure of <inline-formula><mml:math id="M305" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> between IAGOS and ozonesondes, whatever the season. One
difference is the slightly less pronounced decrease in <inline-formula><mml:math id="M306" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> right above
the EI base in ozonesonde profiles. This could be due to the longer
sensor response time of ozonesondes (20–30 s against 4 s for IAGOS) and the
subsequent coarser vertical resolution of the sampling that smoothes
the sharp vertical gradients in the capping inversion layer more.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F14" specific-use="star"><caption><p id="d1e4114">IAGOS and ozonesonde PBL-referenced (<bold>a, b</bold>) and
normalized profiles (<bold>c, d</bold>) of <inline-formula><mml:math id="M307" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratios. The number of
profiles accounted for is indicated for each season (in brackets: IAGOS <inline-formula><mml:math id="M308" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SONDE).</p></caption>
            <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f14.pdf"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F15" specific-use="star"><caption><p id="d1e4149">Correlation of <inline-formula><mml:math id="M309" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (<bold>a</bold>) and <inline-formula><mml:math id="M310" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> (<bold>b</bold>) mixing
ratios between the different <inline-formula><mml:math id="M311" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> altitude levels. All vertical profiles
without any data gaps are taken into account. The correlation matrix is
symmetric by construction.</p></caption>
            <?xmltex \igopts{width=312.980315pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/9561/2018/acp-18-9561-2018-f15.pdf"/>

          </fig>

</sec>
<sec id="Ch1.S4.SS4.SSS3">
  <title>Vertical autocorrelation</title>
      <p id="d1e4201">In this section, we analyse the vertical autocorrelation of <inline-formula><mml:math id="M312" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing
ratios in the <inline-formula><mml:math id="M313" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> vertical coordinate system in<?pagebreak page9577?> order to further investigate
the links between the PBL and the FT. The vertical autocorrelation
designates the correlation of mixing ratios between two different altitude
levels. Based on all individual profiles, we calculate the correlation (<inline-formula><mml:math id="M314" display="inline"><mml:mi>R</mml:mi></mml:math></inline-formula>)
between the different pairs of <inline-formula><mml:math id="M315" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> altitude levels. The obtained <inline-formula><mml:math id="M316" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
vertical autocorrelation matrix is shown in Fig. 15. The <inline-formula><mml:math id="M317" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> matrix is also
shown for comparison. Results highlight a difference in variability apart
from the PBL–FT interface. Indeed, within both the PBL (<inline-formula><mml:math id="M318" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> between 0 and 1) and FT
(<inline-formula><mml:math id="M319" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> between 1 and 2), strong correlations are found, usually above 0.75.
Conversely, correlations between the two atmospheric compartments are found
to decrease more quickly with vertical distance, as illustrated by the
(“wave”) shape of the iso-correlation contours. For instance, <inline-formula><mml:math id="M320" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
mixing ratios at <inline-formula><mml:math id="M321" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.9 (i.e. just below the PBL top) appear highly
correlated with <inline-formula><mml:math id="M322" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratios in the entire PBL with correlations
above 0.75 down to <inline-formula><mml:math id="M323" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.0.5, but correlations are found to (more) quickly
deteriorate with altitude in the FT, the 0.75 threshold being reached at
<inline-formula><mml:math id="M324" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 1.4. Similar results are found for <inline-formula><mml:math id="M325" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, except that the change
in
correlation apart from the PBL–FT interface is slightly more smoothed
compared to <inline-formula><mml:math id="M326" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. This would be consistent with the fact that the
differences in <inline-formula><mml:math id="M327" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> between the PBL and FT are mostly explained by the dynamics
(transport) in contrast to <inline-formula><mml:math id="M328" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, for which the chemistry prevailing
within the PBL helps to differentiate the <inline-formula><mml:math id="M329" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing
ratios and their variability more strongly in the two atmospheric compartments (as
discussed in Sect. 4.4.1).
<?xmltex \hack{\vspace{-3mm}}?></p>
</sec>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <title>Summary and conclusion</title>
      <p id="d1e4415">In this study, we investigated the vertical stratification of <inline-formula><mml:math id="M330" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M331" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>
in the PBL and at the interface with the FT. Some results were also given
for potential temperature and RH. We collected all the in situ vertical
profiles measured by WOUDC ozonesondes and IAGOS aircraft at the northern
mid-latitudes. Over the period 1994–2016, this represents a dataset of more
than 90 000 profiles (78 % IAGOS profiles, 22 % sonde profiles).</p>
      <p id="d1e4437">As a preliminary step, we used all temperature profiles to identify
surface-based and elevated temperature inversions (denoted SBIs and EIs,
respectively). The occurrence of SBIs was found to strongly vary throughout
the day, with frequencies ranging between 10 % at midday and 60 % in
the very early morning. Our results also highlighted strong diurnal variations
in the characteristics of SBIs, the deepest and<?pagebreak page9578?> strongest SBIs being
observed during the night. However, no particular seasonal variation in SBIs
was observed. On the profiles without SBIs, we looked for EIs, the base of
which was taken as an estimate of the PBL height. This approach allows us to
identify where the capping inversion occurs but this likely does not always
correspond to the PBL height as it may sometimes correspond to the top of a
residual layer (especially during the night or in the morning when the PBL
is not fully developed). In contrast to SBIs, EIs exhibited no diurnal
variations but some weak seasonal variations, with the deepest (thinnest)
and sharpest (smoothest) EIs occurring during winter (summer); the strength
is represented here by the temperature lapse rate within the inversion
layer. The climatological PBL heights as determined with the EI method were
found to be consistent with the results obtained by
Seidel et al. (2010) through a more exhaustive analysis
of meteorological sondes.</p>
      <p id="d1e4440">Based on these PBL height estimations (denoted <inline-formula><mml:math id="M332" display="inline"><mml:mi>h</mml:mi></mml:math></inline-formula>), we built the so-called
PBL-referenced vertical distribution of RH, <inline-formula><mml:math id="M333" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M334" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> calculated by
averaging all individual profiles formerly expressed as a function of <inline-formula><mml:math id="M335" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> (with
<inline-formula><mml:math id="M336" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> the altitude). Considering <inline-formula><mml:math id="M337" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> rather than <inline-formula><mml:math id="M338" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> aims at shedding light on the
features at the PBL–FT interface which would have been smoothed
otherwise. For all meteorological parameters and chemical species, the
PBL-referenced profiles highlighted clear inflexion points at the PBL top,
which supports our ability to capture reasonably well a real geophysical
interface with the EI method. Comparing the PBL-referenced profiles obtained
with IAGOS and ozonesondes taken separately showed a broad consistency for
potential temperature and RH, although some differences exist. In order to
quantify how well pollutants are mixed within the PBL, we introduced two
factors of vertical stratification, the first (<inline-formula><mml:math id="M339" display="inline"><mml:mrow><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> being defined as
the standard deviation of the profile in the PBL (<inline-formula><mml:math id="M340" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>/</mml:mo><mml:mi>h</mml:mi></mml:mrow></mml:math></inline-formula> between 0 and 1)
normalized by the mean and the second (<inline-formula><mml:math id="M341" display="inline"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> being defined as <inline-formula><mml:math id="M342" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula>
normalized by the PBL height. Results showed that the frequently assumed
well-mixed PBL remains an exception. The <inline-formula><mml:math id="M343" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M344" display="inline"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> vertical
stratification of <inline-formula><mml:math id="M345" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> within the PBL was 11 % (1.7 % hm<inline-formula><mml:math id="M346" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> on
average, with some seasonal and diurnal variations (only for <inline-formula><mml:math id="M347" display="inline"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. A
stronger vertical stratification was found for <inline-formula><mml:math id="M348" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with a <inline-formula><mml:math id="M349" display="inline"><mml:mi mathvariant="italic">γ</mml:mi></mml:math></inline-formula>
(<inline-formula><mml:math id="M350" display="inline"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> factor of 18 % (5.1 % hm<inline-formula><mml:math id="M351" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> on average. The seasonal
and diurnal variations of the <inline-formula><mml:math id="M352" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> vertical stratification were also
stronger than for <inline-formula><mml:math id="M353" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, with values ranging from <inline-formula><mml:math id="M354" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 10 % in
spring–summer midday–afternoon to <inline-formula><mml:math id="M355" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 25 % in winter–fall
night. For both species, this vertical stratification was not uniform
through the PBL as stronger vertical gradients were found at both the
surface (dry deposition and titration by NO for <inline-formula><mml:math id="M356" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>; surface emissions
for <inline-formula><mml:math id="M357" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>) and the PBL–FT interface. These vertical gradients at the PBL top
strongly vary with the season, with maximum (minimum) values in winter
(summer). In comparison, lower vertical gradients were found in the lower
FT. Investigating the variations of the vertical stratification factors with
the surface potential temperature highlighted an interesting bell shape for
<inline-formula><mml:math id="M358" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (but not for <inline-formula><mml:math id="M359" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>) with the weakest stratification at both the lowest
(typically negative) and highest temperatures. This could be due to a
substantial decrease in the <inline-formula><mml:math id="M360" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> dry deposition in the presence of snow,
although dedicated studies are required to confirm or reject this
hypothesis. Consistent PBL-referenced profiles were obtained for IAGOS and
ozonesondes taken separately.</p>
      <p id="d1e4725">Therefore, these results illustrate the fact that EIs indeed act as a
geophysical interface between the PBL and FT. Compared to <inline-formula><mml:math id="M361" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, the <inline-formula><mml:math id="M362" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
PBL-referenced profiles exhibit a sharper inflexion point at the PBL–FT
interface, which suggests that the <inline-formula><mml:math id="M363" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> inflexion point may be mostly due to
dynamics (since its chemical reactivity is low), while the stronger <inline-formula><mml:math id="M364" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
inflexion point would result from the combined effect of both dynamics and
chemistry (different chemical regimes between the PBL and FT). This is also
supported by the matrices of vertical autocorrelation that highlighted lower
correlations apart from the PBL–FT interface and higher correlations within
each of the two atmospheric compartments (PBL and FT), especially for
<inline-formula><mml:math id="M365" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e4778">This study focused on the general characteristics of the <inline-formula><mml:math id="M366" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M367" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>
vertical stratification at northern mid-latitudes by aggregating the largest
amount of profiles. It would be interesting in the near future to
investigate how these PBL-referenced profiles differ depending on the
environment (urban, rural, coastal, remote) or the region. In
order to make some relevant comparisons, such an analysis would
require a sufficiently large amount of data since <inline-formula><mml:math id="M368" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M369" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> profiles
often exhibit both high variability and a complex vertical structure due
to the numerous processes at work. Among the other perspectives, as they
combine both chemical (mixing ratios) and dynamical (PBL height)
information, these PBL-referenced profiles may offer a more meaningful way
to evaluate the ability of CTMs to properly reproduce the vertical
distribution of pollution in a constantly evolving PBL. Although current
CTMs are probably not able to reproduce the sharp gradients in the
capping inversion or entrainment zone due to too-coarse vertical resolution,
it remains important to investigate more thoroughly how well they simulate
the vertical distribution of the pollutants under varying PBL conditions.
This is particularly important in urban areas where strong emissions occur
at a surface characterized by a complex roughness (due to buildings),
which greatly influences the pollution dispersion. As it operates
multispecies (<inline-formula><mml:math id="M370" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M371" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>, and now <inline-formula><mml:math id="M372" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, as well as <inline-formula><mml:math id="M373" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M374" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, <inline-formula><mml:math id="M375" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
and aerosols in the near future) profile measurements in the vicinity of
large agglomerations, the IAGOS research infrastructure offers rich
opportunities for such studies. In order to allow for further studies, the mean
climatological <inline-formula><mml:math id="M376" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M377" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> PBL-referenced profiles analysed in this study
are freely available on the IAGOS portal for each season and time of day
(<uri>http://dx.doi.org/10.25326/4</uri>) (Petetin et
al., 2018b). Concerning the representativeness of this dataset and the
potential impact of airport pollution on IAGOS observations, an in-depth
<inline-formula><mml:math id="M378" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M379" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> comparison between IAGOS and nearby and more distant surface
stations around a few major<?pagebreak page9579?> European airports has recently shown that the
IAGOS data in the lowest troposphere exhibit characteristics typical of
urban–suburban surface stations (Petetin et al.,
2018a). This should encourage more detailed model evaluations of the
vertical distribution of the pollution, as now performed operationally with
CAMS regional models in the framework of Copernicus (see <uri>http://www.iagos.fr/cams</uri> for daily comparisons).</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability">

      <p id="d1e4926">No new measurements were made for this review article. All datasets
mentioned in the text were obtained from existing databases. The IAGOS data
are available at <uri>http://www.iagos.fr</uri> or directly via the AERIS website at <uri>http://www.aeris-data.fr</uri>. The ozone soundings can be
downloaded from the World Ozone and Ultraviolet Radiation Data Centre (WOUDC) database (<uri>http://www.woudc.org</uri>) supported by
Environment Canada (<ext-link xlink:href="https://doi.org/10.14287/10000001" ext-link-type="DOI">10.14287/10000001</ext-link>, WMO/GAW Ozone
Monitoring Community, 2018). The climatological <inline-formula><mml:math id="M380" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M381" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula>
PBL-referenced profiles are available through the IAGOS central database
(<uri>http://iagos.sedoo.fr</uri>) and are part of the ancillary products
(<ext-link xlink:href="https://doi.org/10.25326/4" ext-link-type="DOI">10.25326/4</ext-link>) (Petetin et al., 2018b).</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e4967">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/acp-18-9561-2018-supplement" xlink:title="pdf">https://doi.org/10.5194/acp-18-9561-2018-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution">

      <p id="d1e4976">Contributed to conception and design: HP.<?xmltex \hack{\newline}?>
Contributed to data acquisition:<?xmltex \hack{\newline}?> HP, VT, BS, HC, GA, RB, DB, J-MC, SR,
PN, HGJS and PN.<?xmltex \hack{\newline}?>
Contributed to data analysis and interpretation:<?xmltex \hack{\newline}?> HP, BS, HGJS, FG, FL and VT.<?xmltex \hack{\newline}?>
Drafted the article: HP.<?xmltex \hack{\newline}?>
Revised the article: HP, BS, VT, HC, RB, HGJS and FG.</p>
  </notes><notes notes-type="competinginterests">

      <p id="d1e4994">The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e5000">We acknowledge the strong support of the European Commission, Airbus and
the airlines (Lufthansa, Air France, Austrian Airlines, Air Namibia, Cathay Pacific,
Iberia and China Airlines so far) that carry the MOZAIC or IAGOS equipment
and have performed maintenance since 1994. In its last 10 years of operation,
MOZAIC has been funded by INSU-CNRS (France), Météo-France,
Université Paul Sabatier (Toulouse, France) and Research Center
Jülich (FZJ, Jülich, Germany). IAGOS has been additionally funded by
the EU projects IAGOS-DS and IAGOS-ERI. The MOZAIC–IAGOS database is
supported by AERIS (CNES and INSU-CNRS). We also acknowledge the WOUDC, the
WMO-GAW and all individual contributors for providing access to the
ozonesonde dataset. We thank the reviewers for their positive contributions
to this study.
<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: Aijun Ding<?xmltex \hack{\newline}?>
Reviewed by: two anonymous referees</p></ack><ref-list>
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    <!--<article-title-html>A climatological view of the vertical stratification of RH, O<sub>3</sub> and CO within the PBL and at the interface with free troposphere as seen by IAGOS aircraft and ozonesondes at northern mid-latitudes over 1994–2016</article-title-html>
<abstract-html><p>This paper investigates in an innovative way the climatological vertical
stratification of relative humidity (RH), ozone (O<sub>3</sub>) and carbon monoxide (CO)
mixing ratios within the planetary boundary layer (PBL) and at the
interface with the free troposphere (FT). The climatology includes all
vertical profiles available at northern mid-latitudes over the period
1994–2016 in both the IAGOS (In-service Aircraft for a Global Observing System)
and WOUDC (World Ozone and Ultraviolet Radiation Data Centre) databases,
which represents more than 90&thinsp;000 vertical profiles. For all individual
profiles, apart from the specific case of surface-based temperature
inversions (SBIs), the PBL height is estimated following the elevated
temperature inversion (EI) method. Several features of both SBIs and EIs are
analysed, including their diurnal and seasonal variations. Based on these PBL
height estimates (denoted <i>h</i>), the novel approach introduced in this paper
consists of building a so-called PBL-referenced vertical distribution of
O<sub>3</sub>, CO and RH by averaging all individual profiles beforehand
expressed as a function of <i>z</i>∕<i>h</i> rather than <i>z</i> (with <i>z</i> the altitude).
Using this vertical coordinate system allows us to highlight the features
existing at the PBL–FT interface that would have been smoothed otherwise.</p><p>Results demonstrate that the frequently assumed well-mixed PBL remains an
exception for both chemical species. Within the PBL, CO profiles are
characterized by a mean vertical stratification (here defined as the
standard deviation of the CO profile between the surface and the PBL top,
normalized by the mean) of 11&thinsp;%, with moderate seasonal and diurnal
variations. A higher vertical stratification is observed for O<sub>3</sub> mixing
ratios (18&thinsp;%), with stronger seasonal and diurnal variability (from
 ∼ &thinsp;10&thinsp;% in spring–summer midday–afternoon to  ∼ &thinsp;25&thinsp;% in winter–fall night). This vertical stratification is distributed
heterogeneously in the PBL with stronger vertical gradients observed at both
the surface (due to dry deposition and titration by NO for O<sub>3</sub> and due
to surface emissions for CO) and the PBL–FT interface. These gradients vary
with the season from the lowest values in summer to the highest ones in winter. In
contrast to CO, the O<sub>3</sub> vertical stratification was found to vary with
the surface potential temperature following an interesting bell shape with
the weakest stratification for both the lowest (typically negative) and highest
temperatures, which could be due to much lower O<sub>3</sub> dry deposition in
the presence of snow.</p><p>Therefore, results demonstrate that EIs act as a geophysical interface
separating air masses of distinct chemical composition and/or chemical
regime. This is further supported by the analysis of the correlation of
O<sub>3</sub> and CO mixing ratios between the different altitude levels in the
PBL and FT (the so-called vertical autocorrelation). Results indeed
highlight lower correlations apart from the PBL–FT interface and higher
correlations within each of the two atmospheric compartments (PBL and FT).</p><p>The mean climatological O<sub>3</sub> and CO PBL-referenced profiles analysed in
this study are freely available on the IAGOS portal for all seasons and
times of day (<a href="https://doi.org/10.25326/4" target="_blank">https://doi.org/10.25326/4</a>).</p></abstract-html>
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