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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0"><?xmltex \makeatother\@nolinetrue\makeatletter?>
  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-18-8001-2018</article-id><title-group><article-title>Investigation of the oxidation of methyl vinyl ketone (MVK) by OH radicals in the atmospheric simulation chamber SAPHIR</article-title><alt-title>OH oxidation MVK in SAPHIR</alt-title>
      </title-group><?xmltex \runningtitle{OH oxidation MVK in SAPHIR}?><?xmltex \runningauthor{H. Fuchs et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Fuchs</surname><given-names>Hendrik</given-names></name>
          <email>h.fuchs@fz-juelich.de</email>
        <ext-link>https://orcid.org/0000-0003-1263-0061</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Albrecht</surname><given-names>Sascha</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7379-2382</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff3">
          <name><surname>Acir</surname><given-names>Ismail–Hakki</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Bohn</surname><given-names>Birger</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-4177-3934</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Breitenlechner</surname><given-names>Martin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Dorn</surname><given-names>Hans-Peter</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5945-7708</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Gkatzelis</surname><given-names>Georgios I.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4608-3695</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Hofzumahaus</surname><given-names>Andreas</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2876-0880</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Holland</surname><given-names>Frank</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff4">
          <name><surname>Kaminski</surname><given-names>Martin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Keutsch</surname><given-names>Frank N.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Novelli</surname><given-names>Anna</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2077-7573</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Reimer</surname><given-names>David</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Rohrer</surname><given-names>Franz</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Tillmann</surname><given-names>Ralf</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0648-6622</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Vereecken</surname><given-names>Luc</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7845-684X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Wegener</surname><given-names>Robert</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2042-9333</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Zaytsev</surname><given-names>Alexander</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Kiendler-Scharr</surname><given-names>Astrid</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3166-2253</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Wahner</surname><given-names>Andreas</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8948-1928</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Institute of Energy and Climate Research, IEK-8: Troposphere, Forschungszentrum Jülich GmbH, Jülich, Germany</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>School of Engineering and Applied Sciences and Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA</institution>
        </aff>
        <aff id="aff3"><label>a</label><institution>now at: Institute of Nutrition and Food Sciences, Food Chemistry, University of Bonn, Germany</institution>
        </aff>
        <aff id="aff4"><label>b</label><institution>now at: Bundesamt für Verbraucherschutz, Abteilung 5 – Methodenstandardisierung, Berlin, Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Hendrik Fuchs (h.fuchs@fz-juelich.de)</corresp></author-notes><pub-date><day>7</day><month>June</month><year>2018</year></pub-date>
      
      <volume>18</volume>
      <issue>11</issue>
      <fpage>8001</fpage><lpage>8016</lpage>
      <history>
        <date date-type="received"><day>12</day><month>March</month><year>2018</year></date>
           <date date-type="rev-request"><day>19</day><month>March</month><year>2018</year></date>
           <date date-type="rev-recd"><day>18</day><month>May</month><year>2018</year></date>
           <date date-type="accepted"><day>23</day><month>May</month><year>2018</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2018 </copyright-statement>
        <copyright-year>2018</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/.html">This article is available from https://acp.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/.pdf</self-uri>
      <abstract>
    <p id="d1e274">The photooxidation of methyl vinyl ketone (<inline-formula><mml:math id="M1" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>) was investigated in
the atmospheric simulation chamber SAPHIR for conditions at which organic
peroxy radicals (<inline-formula><mml:math id="M2" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) mainly reacted with <inline-formula><mml:math id="M3" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> (“high
<inline-formula><mml:math id="M4" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>” case) and for conditions at which other reaction channels could
compete (“low <inline-formula><mml:math id="M5" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>” case). Measurements of trace gas concentrations
were compared to calculated concentration time series applying the Master
Chemical Mechanism (MCM version 3.3.1). Product yields of methylglyoxal and
glycolaldehyde were determined from measurements. For the high <inline-formula><mml:math id="M6" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
case, the methylglyoxal yield was (19 <inline-formula><mml:math id="M7" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 3) % and the glycolaldehyde yield
was (65 <inline-formula><mml:math id="M8" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 14) %, consistent with recent literature studies. For the low
<inline-formula><mml:math id="M9" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> case, the methylglyoxal yield reduced to (5 <inline-formula><mml:math id="M10" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 2) % because
other <inline-formula><mml:math id="M11" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction channels that do not form methylglyoxal became
important. Consistent with literature data, the glycolaldehyde yield of
(37 <inline-formula><mml:math id="M12" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 9) % determined in the experiment was not reduced as much as
implemented in the MCM, suggesting additional reaction channels producing
glycolaldehyde. At the same time, direct quantification of <inline-formula><mml:math id="M13" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> radicals
in the experiments shows the need for an enhanced <inline-formula><mml:math id="M14" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> radical
production at low <inline-formula><mml:math id="M15" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> conditions similar to previous studies
investigating the oxidation of the parent VOC isoprene and methacrolein, the
second major oxidation product of isoprene. For <inline-formula><mml:math id="M16" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> the
model–measurement discrepancy was up to a factor of 2. Product yields and
<inline-formula><mml:math id="M17" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> observations were consistent with assumptions of additional
<inline-formula><mml:math id="M18" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> plus <inline-formula><mml:math id="M19" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction channels as proposed in literature for
the major <inline-formula><mml:math id="M20" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> species formed from the reaction of <inline-formula><mml:math id="M21" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> with
<inline-formula><mml:math id="M22" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>. However, this study shows that also <inline-formula><mml:math id="M23" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radical
concentrations are underestimated by the model, suggesting that additional
<inline-formula><mml:math id="M24" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> is not directly produced from <inline-formula><mml:math id="M25" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radical reactions, but
indirectly via increased <inline-formula><mml:math id="M26" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. Quantum chemical calculations show that
<inline-formula><mml:math id="M27" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> could be produced from a fast 1,4-<inline-formula><mml:math id="M28" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula> shift of the second
most important <inline-formula><mml:math id="M29" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> derived <inline-formula><mml:math id="M30" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> species (reaction rate constant
<inline-formula><mml:math id="M31" display="inline"><mml:mn mathvariant="normal">0.003</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M32" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>). However, additional <inline-formula><mml:math id="M33" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from this reaction
was not sufficiently large to bring modelled <inline-formula><mml:math id="M34" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radical
concentrations into agreement with measurements due to the small yield of
this <inline-formula><mml:math id="M35" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> species. An additional reaction channel of the major
<inline-formula><mml:math id="M36" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> species with a reaction rate constant of
(0.006 <inline-formula><mml:math id="M37" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.004) <inline-formula><mml:math id="M38" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> would be required that produces concurrently
<inline-formula><mml:math id="M39" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals and glycolaldehyde to achieve model–measurement
agreement. A unimolecular reaction similar to the
1,5-<inline-formula><mml:math id="M40" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula> shift reaction
that was proposed in literature for <inline-formula><mml:math id="M41" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals from <inline-formula><mml:math id="M42" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>
would not explain product yields for conditions of experiments in this study.
A set of <inline-formula><mml:math id="M43" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-migration reactions for the main <inline-formula><mml:math id="M44" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals were
investigated by quantum chemical and theoretical kinetic methodologies, but
did not reveal a contributing route to <inline-formula><mml:math id="M45" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals or
glycolaldehyde.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<?pagebreak page8002?><sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e711">Isoprene (<inline-formula><mml:math id="M46" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">5</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">8</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) emitted by plants <xref ref-type="bibr" rid="bib1.bibx23" id="paren.1"/>
has the highest emission rate among non-methane organic compounds. Isoprene
is mainly oxidised by the photochemically generated hydroxyl radical
(<inline-formula><mml:math id="M47" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>) forming the first-generation organic compounds methacrolein
(<inline-formula><mml:math id="M48" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MACR</mml:mi></mml:mrow></mml:math></inline-formula>), methyl vinyl ketone (<inline-formula><mml:math id="M49" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>), formaldehyde (<inline-formula><mml:math id="M50" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HCHO</mml:mi></mml:mrow></mml:math></inline-formula>
and isoprene hydroxyperoxides (<inline-formula><mml:math id="M51" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">ISOPOOH</mml:mi></mml:mrow></mml:math></inline-formula>) <xref ref-type="bibr" rid="bib1.bibx28" id="paren.2"><named-content content-type="pre">e.g.</named-content></xref>. The
latter ones are formed without the involvement of nitric oxide (<inline-formula><mml:math id="M52" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>) so
that ISOPOOH becomes increasingly important with decreasing concentrations of
nitrogen oxides <xref ref-type="bibr" rid="bib1.bibx49" id="paren.3"/> which are mainly released by anthropogenic
activities. The formation of <inline-formula><mml:math id="M53" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M54" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MACR</mml:mi></mml:mrow></mml:math></inline-formula> is accompanied by the
production of <inline-formula><mml:math id="M55" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, which can further recycle <inline-formula><mml:math id="M56" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>, whereas
<inline-formula><mml:math id="M57" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">ISOPOOH</mml:mi></mml:mrow></mml:math></inline-formula> formation is a radical termination reaction. However, field
studies have shown that also in environments where <inline-formula><mml:math id="M58" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> concentrations
are less than a few 100 <inline-formula><mml:math id="M59" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">pptv</mml:mi></mml:mrow></mml:math></inline-formula> a high <inline-formula><mml:math id="M60" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> regeneration rate can
be maintained which is not explained by chemical models <xref ref-type="bibr" rid="bib1.bibx50 bib1.bibx31 bib1.bibx26 bib1.bibx56" id="paren.4"/>. The gap between measured and
modelled <inline-formula><mml:math id="M61" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> is correlated with the abundance of isoprene
<xref ref-type="bibr" rid="bib1.bibx34" id="paren.5"/>. Since then, it has been recognised that organic peroxy
radical (<inline-formula><mml:math id="M62" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) pathways which do not require <inline-formula><mml:math id="M63" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> as reaction
partner can also significantly recycle <inline-formula><mml:math id="M64" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx55" id="paren.6"/>. These
reactions include
<list list-type="bullet"><list-item>
      <p id="d1e906">hydrogen-shift reactions of <inline-formula><mml:math id="M65" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals forming <inline-formula><mml:math id="M66" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M67" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>,</p></list-item><list-item>
      <p id="d1e940">reaction of peroxy radicals with <inline-formula><mml:math id="M68" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.</p></list-item></list>
These pathways have both been identified in the oxidation chain of isoprene
<xref ref-type="bibr" rid="bib1.bibx41 bib1.bibx42" id="paren.7"/>. A 1,6 <inline-formula><mml:math id="M69" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift of <inline-formula><mml:math id="M70" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> formed in
the reaction of isoprene with <inline-formula><mml:math id="M71" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> leads to the formation of
hydroxyperoxy aldehydes (HPALD) and <inline-formula><mml:math id="M72" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. The photolysis of
<inline-formula><mml:math id="M73" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HPALD</mml:mi></mml:mrow></mml:math></inline-formula> gives even additional <inline-formula><mml:math id="M74" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> radicals. Its relevance for the
atmosphere has been shown in laboratory experiments <xref ref-type="bibr" rid="bib1.bibx6 bib1.bibx59" id="paren.8"/> and chamber experiments <xref ref-type="bibr" rid="bib1.bibx17" id="paren.9"/>. In the supplement of
the first publication of the LIM <xref ref-type="bibr" rid="bib1.bibx41" id="paren.10"/> the authors also
suggested that a 1,5-<inline-formula><mml:math id="M75" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift reaction could be relevant for <inline-formula><mml:math id="M76" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M77" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MACR</mml:mi></mml:mrow></mml:math></inline-formula>. However, for <inline-formula><mml:math id="M78" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MACR</mml:mi></mml:mrow></mml:math></inline-formula> a 1,4 <inline-formula><mml:math id="M79" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift reaction for
<inline-formula><mml:math id="M80" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was found, which efficiently recycles <inline-formula><mml:math id="M81" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
<xref ref-type="bibr" rid="bib1.bibx7" id="paren.11"/>. Its impact on the radical budget has been shown in
chamber experiments <xref ref-type="bibr" rid="bib1.bibx18" id="paren.12"/>. <inline-formula><mml:math id="M82" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift reactions have also
been proposed to be important for <inline-formula><mml:math id="M83" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals which are formed in
the oxidation chain of <inline-formula><mml:math id="M84" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">ISOPOOH</mml:mi></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx8" id="paren.13"/> also potentially
enhancing the <inline-formula><mml:math id="M85" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> regeneration rate.</p>
      <p id="d1e1128">The reaction of peroxy radicals with <inline-formula><mml:math id="M86" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> forms not only
hydroxyperoxides, but also <inline-formula><mml:math id="M87" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> together with an alkoxy radical. This
was shown for the acetylperoxy radical with an <inline-formula><mml:math id="M88" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> yield of 50 %
<xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx58" id="paren.14"/>. In a recent study by <xref ref-type="bibr" rid="bib1.bibx43" id="text.15"/>,
product yields from the reaction of <inline-formula><mml:math id="M89" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> derived peroxy radicals with
<inline-formula><mml:math id="M90" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> were investigated. Similar to the acetylperoxy radical, product
yields demonstrated that only one third of the reaction yields
hydroxyperoxides and that two additional reaction channels exist, both of
which could lead to the reformation of <inline-formula><mml:math id="M91" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e1192">In this study, the oxidation of <inline-formula><mml:math id="M92" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> by <inline-formula><mml:math id="M93" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> was investigated in
the atmospheric simulation chamber SAPHIR (Simulation of Atmospheric
Photochemistry In a Large Reaction Chamber) at Forschungszentrum Jülich.
Experiments were performed under controlled conditions with atmospheric trace
gas and radical concentrations. In these experiments, not only organic
compounds like in previous studies were measured, but also radical species
(<inline-formula><mml:math id="M94" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M95" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M96" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) allowing for an analysis of the
<inline-formula><mml:math id="M97" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> budget. In the low <inline-formula><mml:math id="M98" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> case, <inline-formula><mml:math id="M99" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios were
kept below 100 <inline-formula><mml:math id="M100" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">pptv</mml:mi></mml:mrow></mml:math></inline-formula> so that different <inline-formula><mml:math id="M101" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radical reactions,
i.e. reaction with <inline-formula><mml:math id="M102" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and unimolecular isomerisation reactions, can
compete. Measured time series of radical concentrations are compared to model
calculations applying the Master Chemical Mechanism version 3.1.1 <xref ref-type="bibr" rid="bib1.bibx37" id="paren.16"/>
and modifications suggested in literature.</p>
</sec>
<sec id="Ch1.S2">
  <title>Methods</title>
<sec id="Ch1.S2.SS1">
  <title>Simulation experiment in SAPHIR</title>
      <p id="d1e1311">Experiments were performed in the outdoor atmospheric simulation chamber
SAPHIR. Details of the chamber can be found in previous publications
<xref ref-type="bibr" rid="bib1.bibx46" id="paren.17"><named-content content-type="pre">e.g.</named-content></xref>. SAPHIR has a cylindrical shape (length
18 <inline-formula><mml:math id="M103" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, diameter 5 <inline-formula><mml:math id="M104" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, volume 270 <inline-formula><mml:math id="M105" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> and consists of a
double-wall FEP (fluorethylene-propylene) film. A small overpressure
(45 <inline-formula><mml:math id="M106" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">Pa</mml:mi></mml:mrow></mml:math></inline-formula>) prevents ambient air entering the chamber. The replenishment
flow that is required to maintain this pressure leads to a dilution of all
trace gases by approximately 3 to 5 % per hour. A shutter system shades the
chamber before the photooxidation experiment is started. Natural sunlight is
used to irradiate the mixture. Small sources of nitrous acid (<inline-formula><mml:math id="M107" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HONO</mml:mi></mml:mrow></mml:math></inline-formula>)
and formaldehyde (<inline-formula><mml:math id="M108" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HCHO</mml:mi></mml:mrow></mml:math></inline-formula>) are present in the sunlit chamber (100 to
200 <inline-formula><mml:math id="M109" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">pptv</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">h</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>). The photolysis of <inline-formula><mml:math id="M110" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HONO</mml:mi></mml:mrow></mml:math></inline-formula> is typically the primary
source for <inline-formula><mml:math id="M111" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> radicals and nitrogen oxides.</p>
      <p id="d1e1404">In total, four experiments were conducted in this study, two of them at low
<inline-formula><mml:math id="M112" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> (23 June 2016: <inline-formula><mml:math id="M113" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M114" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 70 <inline-formula><mml:math id="M115" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">pptv</mml:mi></mml:mrow></mml:math></inline-formula> and 23 May 2017:
<inline-formula><mml:math id="M116" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M117" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 40 <inline-formula><mml:math id="M118" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">pptv</mml:mi></mml:mrow></mml:math></inline-formula>) and two of them at high <inline-formula><mml:math id="M119" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> conditions
(20 August 2014: 0.7 to 6 <inline-formula><mml:math id="M120" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M121" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> and 17 May 2017: approximately
0.1 to 0.4 <inline-formula><mml:math id="M122" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M123" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>). Results from experiments performed at
similar conditions gave consistent results. The discussion of results focuses
on the two experiments for which the number of trace gas measurements was
highest and results for the other experiments are shown in the Supplement.</p>
      <p id="d1e1503">The experiments started with cleaning the chamber air by flushing out
impurities from previous experiments until trace<?pagebreak page8003?> gas concentrations were
below the detection limit of the instruments. The chamber air was first
humidified by flushing water vapour from boiling water into the dark chamber
(relative humidity approximately 70 %). In the low <inline-formula><mml:math id="M124" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiments,
approximately 140 <inline-formula><mml:math id="M125" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> ozone produced from a silent discharge
ozoniser (O3onia) was injected in the dark in order to suppress <inline-formula><mml:math id="M126" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
concentrations. In contrast, 6 to 10 <inline-formula><mml:math id="M127" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> of <inline-formula><mml:math id="M128" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M129" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
were injected from a gas mixture in case of the high <inline-formula><mml:math id="M130" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiments.
In one of the two low <inline-formula><mml:math id="M131" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiments (23 May 2017), 20 <inline-formula><mml:math id="M132" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula>
<inline-formula><mml:math id="M133" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> (Sigma-Aldrich, purity 99 %) in water was injected in the dark
chamber from a Liquid Calibration Unit (LCU, Ionicon). <inline-formula><mml:math id="M134" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>
(1.5 <inline-formula><mml:math id="M135" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula>) was reinjected after 3.5 h of photooxidation. In the
other experiments, <inline-formula><mml:math id="M136" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> was injected several times during the
experiment after an initial phase of illumination of the chamber air without
additional <inline-formula><mml:math id="M137" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactants by injecting liquid <inline-formula><mml:math id="M138" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> into a heated
inlet line that is flushed by synthetic air. This procedure was similar to
that applied in previous studies <xref ref-type="bibr" rid="bib1.bibx17 bib1.bibx18 bib1.bibx27" id="paren.18"><named-content content-type="pre">e.g.</named-content></xref>. The photooxidation of <inline-formula><mml:math id="M139" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> was then observed for several
hours. No significant particle formation was observed in the experiments so
that only gas-phase chemistry needs to be considered in the evaluation.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Instrumentation</title>
      <p id="d1e1650">Trace gas concentrations were measured with a comprehensive set of
instruments. Nitric oxide (<inline-formula><mml:math id="M140" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>) was detected by chemiluminescence (Eco
Physics) and nitrogen dioxide (<inline-formula><mml:math id="M141" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) by the same instrument but with a
blue-light converter in the inlet. In one of the experiments (17 May 2017),
no <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> measurements were available. A cavity ring-down instrument
(Picarro) monitored water vapour and carbon monoxide and a UV photometer
(Ansyco) detected ozone.</p>
      <p id="d1e1684">The total <inline-formula><mml:math id="M143" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity (inverse lifetime of <inline-formula><mml:math id="M144" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>) was measured
by a pump-probe method <xref ref-type="bibr" rid="bib1.bibx33 bib1.bibx20" id="paren.19"/>, in which the decay of
<inline-formula><mml:math id="M145" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> radicals produced by laser flash photolysis of ozone is observed by
laser-induced fluorescence (LP-LIF). <inline-formula><mml:math id="M146" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity gives a measure of
all <inline-formula><mml:math id="M147" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactant concentrations, so that potential gaps in the
detection of e.g. organic compounds that are relevant for the radical
chemistry can be identified <xref ref-type="bibr" rid="bib1.bibx38" id="paren.20"><named-content content-type="pre">e.g.</named-content></xref>. Unfortunately, the
instrument failed in 2014, thus <inline-formula><mml:math id="M148" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity was only measured in
one of the two high <inline-formula><mml:math id="M149" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiments.</p>
      <p id="d1e1752">Organic compounds were measured by a proton-transfer time-of-flight mass
spectrometer (PTR-TOF-MS, Ionicon), which was calibrated to quantify
<inline-formula><mml:math id="M150" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>. Methylglyoxal (<inline-formula><mml:math id="M151" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CHOCOCH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M152" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MGLYOX</mml:mi></mml:mrow></mml:math></inline-formula>), and
glycolaldehyde (<inline-formula><mml:math id="M153" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HOCH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">CHO</mml:mi></mml:mrow></mml:math></inline-formula>) were quantified in one low and one high
<inline-formula><mml:math id="M154" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment. In the other two experiments, performed in different
years, the PTR-TOF-MS was calibrated for <inline-formula><mml:math id="M155" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>, but not for
methylglyoxal and glycolaldehyde for all experiments so that these species
could not be quantified in all experiments. Acetic acid was detected on the
same mass as glycolaldehyde in the PTR-TOF-MS instrument. However, model
calculations suggest that the contribution of acetic acid was less than
10 % of the total signal. Therefore, measurements represent glycolaldehyde
concentrations reasonably well.</p>
      <p id="d1e1812">A second PTR-TOF-MS instrument (PTR-3, Ionicon) quantified <inline-formula><mml:math id="M156" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>
concentrations in the experiment on 23 May 2017. Measurements of both
instruments agreed within 20 %. In addition to direct measurements of
<inline-formula><mml:math id="M157" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> concentrations, measurements of the <inline-formula><mml:math id="M158" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity can be
used to calculate the <inline-formula><mml:math id="M159" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> concentration that was injected in the
experiments because the increase in <inline-formula><mml:math id="M160" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity at that point in
time can be attributed to the <inline-formula><mml:math id="M161" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> concentration increase. The
comparison with the increase in <inline-formula><mml:math id="M162" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> measurements by the PTR-TOF-MS
instrument shows good agreement.</p>
      <p id="d1e1873">In the experiments in 2017, formaldehyde was measured by the same
differential optical absorption spectroscopy (DOAS) instrument that also
detects <inline-formula><mml:math id="M163" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> radicals in the chamber <xref ref-type="bibr" rid="bib1.bibx10" id="paren.21"/>. In the other
years, <inline-formula><mml:math id="M164" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HCHO</mml:mi></mml:mrow></mml:math></inline-formula> was measured by a Hantzsch monitor. The
<inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula>-precision of the formaldehyde measurement of 230 <inline-formula><mml:math id="M166" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">pptv</mml:mi></mml:mrow></mml:math></inline-formula> is
less than that of the Hantzsch monitor (20 <inline-formula><mml:math id="M167" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">pptv</mml:mi></mml:mrow></mml:math></inline-formula>), but it is
sufficiently high for the detection of <inline-formula><mml:math id="M168" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HCHO</mml:mi></mml:mrow></mml:math></inline-formula> in the experiments here.</p>

      <fig id="Ch1.F1" specific-use="star"><caption><p id="d1e1931">Simplified <inline-formula><mml:math id="M169" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> oxidation scheme for MVK. Names of compounds
are assigned similar to MCM. Modifications to the MCM mechanism (M2) applied
in model sensitivity runs M1 and M2 (Table <xref ref-type="table" rid="Ch1.T1"/>) are shown as
grey arrows. Reaction yields are calculated for conditions of the experiment
with low <inline-formula><mml:math id="M170" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> (high ozone concentrations) on 23 May 2017. Grey numbers
refer to model run M2.</p></caption>
          <?xmltex \igopts{width=284.527559pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/8001/2018/acp-18-8001-2018-f01.pdf"/>

        </fig>

      <p id="d1e1958"><inline-formula><mml:math id="M171" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> was detected by DOAS <xref ref-type="bibr" rid="bib1.bibx10" id="paren.22"/> in all experiments except
for the high <inline-formula><mml:math id="M172" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment in 2014. In addition, <inline-formula><mml:math id="M173" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M174" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M175" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals were measured by laser-induced
fluorescence (LIF). The instrument has been described in detail elsewhere
<xref ref-type="bibr" rid="bib1.bibx13 bib1.bibx15 bib1.bibx19" id="paren.23"/>. <inline-formula><mml:math id="M176" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentrations measured
by LIF in the SAPHIR chamber have been shown to agree with measurements by
DOAS in several comparison exercises <xref ref-type="bibr" rid="bib1.bibx48 bib1.bibx16" id="paren.24"><named-content content-type="pre">e.g.</named-content></xref>. Good agreement was also observed in this work so that
significant potential artefacts in the LIF detection scheme as reported for
some instruments in the field <xref ref-type="bibr" rid="bib1.bibx35 bib1.bibx39 bib1.bibx45" id="paren.25"/> can
be excluded.</p>
      <?pagebreak page8004?><p id="d1e2029"><inline-formula><mml:math id="M177" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M178" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are chemically converted to <inline-formula><mml:math id="M179" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> by the
reaction with <inline-formula><mml:math id="M180" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> prior to <inline-formula><mml:math id="M181" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> detection by laser-induced
fluorescence in the LIF instrument. The conversion of <inline-formula><mml:math id="M182" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> requires at
least two subsequent reactions with <inline-formula><mml:math id="M183" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>. First, <inline-formula><mml:math id="M184" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is
converted through adding <inline-formula><mml:math id="M185" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">HO</mml:mi></mml:mrow><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in a flow reactor upstream of the
fluorescence cell. Added <inline-formula><mml:math id="M187" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula> in the reactor ensures that the
<inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">HO</mml:mi></mml:mrow><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> consists predominantly of <inline-formula><mml:math id="M189" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, which has a small wall
loss compared to <inline-formula><mml:math id="M190" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>. The reactor is operated at higher pressure
(25 <inline-formula><mml:math id="M191" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>) compared to the low-pressure (4 <inline-formula><mml:math id="M192" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">hPa</mml:mi></mml:mrow></mml:math></inline-formula>) LIF detection
cell <xref ref-type="bibr" rid="bib1.bibx14" id="paren.26"/>. The <inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">HO</mml:mi></mml:mrow><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is sampled from the reactor into the
LIF detection cell where <inline-formula><mml:math id="M194" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is converted by a large excess of added
<inline-formula><mml:math id="M195" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M196" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>. Operational parameters of the <inline-formula><mml:math id="M197" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> system are
optimized for the efficient detection of <inline-formula><mml:math id="M198" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals that have a
similar reaction rate with <inline-formula><mml:math id="M199" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> as methylperoxy radicals. As a
consequence, <inline-formula><mml:math id="M200" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals are not efficiently detected, if their
reaction with <inline-formula><mml:math id="M201" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> does not directly and quantitatively result in the
production of <inline-formula><mml:math id="M202" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. This is for example the case for the peroxy
radical <inline-formula><mml:math id="M203" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (as named in the MCM) that is formed from the
reaction of <inline-formula><mml:math id="M204" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M205" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> (see below for details). This has to be
taken into account, if measured <inline-formula><mml:math id="M206" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals are compared with model
calculations.</p>
      <p id="d1e2327">The <inline-formula><mml:math id="M207" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> detection cell consists of a fluorescence cell, in which
<inline-formula><mml:math id="M208" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reacts with excess <inline-formula><mml:math id="M209" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> that is injected behind the inlet
nozzle. As shown for several LIF instruments, the <inline-formula><mml:math id="M210" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signal can also
contain contributions from <inline-formula><mml:math id="M211" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals that rapidly form <inline-formula><mml:math id="M212" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
in the reaction with <inline-formula><mml:math id="M213" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx15 bib1.bibx57 bib1.bibx32" id="paren.27"/>. This
applies for those <inline-formula><mml:math id="M214" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals which form an alkoxy radical
(<inline-formula><mml:math id="M215" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">RO</mml:mi></mml:mrow></mml:math></inline-formula>) in the reaction with <inline-formula><mml:math id="M216" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> that rapidly produces <inline-formula><mml:math id="M217" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
and other products. The interferences from <inline-formula><mml:math id="M218" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> can be minimised;
however, if the instrument is operated with an <inline-formula><mml:math id="M219" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> concentration, for
which the <inline-formula><mml:math id="M220" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M221" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> conversion efficiency is only
approximately less than 10 %. In this case, the <inline-formula><mml:math id="M222" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M223" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
conversion efficiency becomes much smaller for all <inline-formula><mml:math id="M224" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> species,
because the two reactions with <inline-formula><mml:math id="M225" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> needed to produce <inline-formula><mml:math id="M226" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> limit
the overall conversion efficiency. In this study, the <inline-formula><mml:math id="M227" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> channel of
the LIF instrument was operated such that <inline-formula><mml:math id="M228" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> interferences can be
assumed to be negligible.</p>
      <p id="d1e2551">In one of the experiments (23 May 2017), <inline-formula><mml:math id="M229" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was additionally
detected by a newly developed chemical ionisation mass spectrometry (CIMS)
instrument using <inline-formula><mml:math id="M230" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">Br</mml:mi><mml:mo>-</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> as ionisation reagent. <inline-formula><mml:math id="M231" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is detected
as cluster ion similar to the approaches reported by <xref ref-type="bibr" rid="bib1.bibx54 bib1.bibx47" id="text.28"/> using an <inline-formula><mml:math id="M232" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">I</mml:mi><mml:mo>-</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M233" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">Br</mml:mi><mml:mo>-</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> CIMS, respectively. Details
of this new instrument will be presented in a separate publication.
<inline-formula><mml:math id="M234" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements of the CIMS instrument agreed with <inline-formula><mml:math id="M235" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>
detected by the LIF instrument within 15 %.</p>
      <p id="d1e2640">Solar radiation was measured outside the chamber using a spectroradiometer.
Photolysis frequencies are then calculated by applying a model to transfer
outside conditions to conditions inside the chamber <xref ref-type="bibr" rid="bib1.bibx4 bib1.bibx3" id="paren.29"/>. Latest recommendations for absorption spectra and photolysis
yields are used.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p id="d1e2649">Changes of reactions and additional reactions applied to the MCM.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Reaction</oasis:entry>
         <oasis:entry colname="col3">Reaction rate constant</oasis:entry>
         <oasis:entry colname="col4">Reference</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">MCM<inline-formula><mml:math id="M241" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula>:</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">R1:</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M242" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M243" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M244" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M245" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M246" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.24</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2.6</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup><mml:mi>exp⁡</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">610</mml:mn><mml:mi mathvariant="normal">K</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">T</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M248" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx43" id="text.31"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">R2:</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M249" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M250" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M251" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M252" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M253" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.76</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2.6</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup><mml:mi>exp⁡</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">610</mml:mn><mml:mi mathvariant="normal">K</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">T</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M255" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx43" id="text.32"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M256" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HOCH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">CHO</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M257" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M258" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M259" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> products</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:mn mathvariant="normal">8</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M261" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx29" id="text.33"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M262" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M263" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M264" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M265" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M266" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M267" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> products</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M268" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.16</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">8.5</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">16</mml:mn></mml:mrow></mml:msup><mml:mi>exp⁡</mml:mi><mml:mo>(</mml:mo></mml:mrow></mml:math></inline-formula>-<inline-formula><mml:math id="M269" display="inline"><mml:mrow><mml:mn mathvariant="normal">1520</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">K</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">T</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><xref ref-type="bibr" rid="bib1.bibx1" id="text.34"/>,</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx40" id="text.35"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">M1 (includes MCM<inline-formula><mml:math id="M270" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula>):</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">R3:</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M271" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M272" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M273" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M274" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M275" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HMVKBOOH</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M276" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.34</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.625</mml:mn></mml:mrow></mml:math></inline-formula> KRO2HO2<inline-formula><mml:math id="M277" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx43" id="text.36"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">R4:</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M278" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M279" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M280" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M281" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M282" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HMVKBO</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M283" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M284" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M285" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.48</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.625</mml:mn></mml:mrow></mml:math></inline-formula> KRO2HO2<inline-formula><mml:math id="M286" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx43" id="text.37"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">R5:</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M287" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M288" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M289" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M290" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M291" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BIACETOH</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M292" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M293" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M294" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M295" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M296" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.18</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.625</mml:mn></mml:mrow></mml:math></inline-formula> KRO2HO2<inline-formula><mml:math id="M297" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx43" id="text.38"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">M2 (includes M1 and  MCM<inline-formula><mml:math id="M298" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula>):</oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">R7:</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M299" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M300" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M301" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> + <inline-formula><mml:math id="M302" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BIACETOOH</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M303" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.003</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M304" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M305" display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">This work</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">R8:</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M306" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M307" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>X)<inline-formula><mml:math id="M308" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula> <inline-formula><mml:math id="M309" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M310" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M311" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M312" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HOCH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">CHO</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M313" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0.006</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.004</mml:mn><mml:mo>)</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M314" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">This work</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">+<inline-formula><mml:math id="M315" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HCHO</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M316" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M317" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M318" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HOCH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M319" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M320" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M321" display="inline"><mml:mo>→</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M322" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PHAN</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0</oasis:entry>
         <oasis:entry colname="col4">This work</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e2652"><inline-formula><mml:math id="M236" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula> value from MCM: 0.625 KRO2HO2 <inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2.91</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">13</mml:mn></mml:mrow></mml:msup><mml:mi>exp⁡</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1300</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">K</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">T</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M238" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
<xref ref-type="bibr" rid="bib1.bibx37" id="paren.30"/> <inline-formula><mml:math id="M239" display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula> from theoretical calculation (see Table <xref ref-type="table" rid="Ch1.T2"/>).
<inline-formula><mml:math id="M240" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula> A reaction partner could not be determined from these experiments.</p></table-wrap-foot></table-wrap>

</sec>
<sec id="Ch1.S2.SS3">
  <title>Model calculations</title>
      <p id="d1e3867">Model calculations were performed using the Master Chemical Mechanism in its
latest version 3.3.1 <xref ref-type="bibr" rid="bib1.bibx37" id="paren.39"/>. A simplified reaction scheme is shown in
Fig. <xref ref-type="fig" rid="Ch1.F1"/>. The MCM mechanism was modified (MCM*) to take results
reported in literature into account and findings in this work. Details are
listed in Table <xref ref-type="table" rid="Ch1.T1"/>.</p>
      <p id="d1e3877">Chamber specific properties were added such as dilution of traces gases due
to the replenishment flow. Sources for <inline-formula><mml:math id="M323" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HONO</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M324" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HCHO</mml:mi></mml:mrow></mml:math></inline-formula> production
from the chamber were parameterised as described in previous publications
<xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx27" id="paren.40"><named-content content-type="pre">e.g.</named-content></xref>.</p>
      <p id="d1e3901">Model calculations were constrained to physical parameters (pressure,
temperature, photolysis frequencies and dilution rate of trace gases). A small,
constant background <inline-formula><mml:math id="M325" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity of unknown <inline-formula><mml:math id="M326" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactants that
was measured by the <inline-formula><mml:math id="M327" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity instrument after humidification of
the chamber air was modelled as an <inline-formula><mml:math id="M328" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactant that converts <inline-formula><mml:math id="M329" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
to <inline-formula><mml:math id="M330" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.<?pagebreak page8005?> However, the magnitude of this background reactivity was
small (<inline-formula><mml:math id="M331" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M332" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) compared to the <inline-formula><mml:math id="M333" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity from
<inline-formula><mml:math id="M334" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> during the experiment (<inline-formula><mml:math id="M335" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">15</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M336" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) so that it did not
affect the chemistry.</p>
      <p id="d1e4021">Injections of trace gases were modelled as sources during the time of
injection, but injected trace gases were not constrained to measured values
at later times. <inline-formula><mml:math id="M337" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M338" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M339" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> were only
constrained to measurements for the high <inline-formula><mml:math id="M340" display="inline"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> experiment, because
differences between modelled and measured values would have led to
significant differences in other observables. No modelling could be performed
for one of the high <inline-formula><mml:math id="M341" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiments (17 May 2017) due to the lack of
<inline-formula><mml:math id="M342" display="inline"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> measurements. No measurements for the reaction rate constants of
<inline-formula><mml:math id="M343" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> species from <inline-formula><mml:math id="M344" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> exist. The sensitivity of model results
to a change of the <inline-formula><mml:math id="M345" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction rate constants, however, is rather
small so that their uncertainties could not explain observed
model–measurements discrepancies.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><caption><p id="d1e4133"><inline-formula><mml:math id="M346" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-migration and <inline-formula><mml:math id="M347" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> elimination in
<inline-formula><mml:math id="M348" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">hydroxy</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">MVK</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">peroxy</mml:mi></mml:mrow></mml:math></inline-formula> radicals. Barrier height <inline-formula><mml:math id="M349" display="inline"><mml:mrow><mml:msub><mml:mi>E</mml:mi><mml:mtext>b</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, reaction energy
<inline-formula><mml:math id="M350" display="inline"><mml:mrow><mml:msub><mml:mi>E</mml:mi><mml:mtext>react</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and the rate coefficient <inline-formula><mml:math id="M351" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> at a temperature of 300 <inline-formula><mml:math id="M352" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>
are listed. Arrhenius expressions for a temperature range between 200 and
400 <inline-formula><mml:math id="M353" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula> are available in the Supplement.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Reactant</oasis:entry>
         <oasis:entry colname="col2">Reaction class</oasis:entry>
         <oasis:entry colname="col3">Product</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M357" display="inline"><mml:mrow><mml:msub><mml:mi>E</mml:mi><mml:mtext>b</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M358" display="inline"><mml:mrow><mml:msub><mml:mi>E</mml:mi><mml:mtext>react</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M359" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> (300 <inline-formula><mml:math id="M360" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">K</mml:mi></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M361" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">kcal</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M362" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">mol</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M363" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">kcal</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M364" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">mol</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M365" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M366" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M367" display="inline"><mml:mrow class="chem"><mml:mo>-</mml:mo><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> 1,5-<inline-formula><mml:math id="M368" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M369" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">C</mml:mi><mml:mo>(</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="normal">O</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="normal">CH</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>•</mml:mo></mml:msup><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">OOH</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">21.6</oasis:entry>
         <oasis:entry colname="col5">20.4</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M370" display="inline"><mml:mrow><mml:mn mathvariant="normal">5.0</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M371" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="italic">α</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> 1,4-<inline-formula><mml:math id="M372" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M373" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">C</mml:mi><mml:mo>(</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="normal">O</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="normal">C</mml:mi><mml:mo>•</mml:mo></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">OOH</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">24.7</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M374" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>6.2</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M375" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.3</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M376" display="inline"><mml:mrow class="chem"><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> 1,6-<inline-formula><mml:math id="M377" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M378" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">C</mml:mi><mml:mo>•</mml:mo></mml:msup><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">C</mml:mi><mml:mo>(</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="normal">O</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="normal">CH</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">OOH</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">23.1</oasis:entry>
         <oasis:entry colname="col5">10.2</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M379" display="inline"><mml:mrow><mml:mn mathvariant="normal">5.9</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M380" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M381" display="inline"><mml:mrow class="chem"><mml:mo>-</mml:mo><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> 1,5-<inline-formula><mml:math id="M382" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M383" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">C</mml:mi><mml:mo>(</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="normal">O</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="normal">CH</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">OOH</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>•</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">22.5</oasis:entry>
         <oasis:entry colname="col5">20.6</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M384" display="inline"><mml:mrow><mml:mn mathvariant="normal">8.8</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M385" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M386" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="italic">α</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> 1,4-<inline-formula><mml:math id="M387" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M388" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">C</mml:mi><mml:mo>(</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="normal">O</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="normal">CH</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">OOH</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="normal">C</mml:mi><mml:mo>•</mml:mo></mml:msup><mml:mi mathvariant="normal">HOH</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">25.1</oasis:entry>
         <oasis:entry colname="col5">6.5</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M389" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M390" display="inline"><mml:mrow class="chem"><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> 1,6-<inline-formula><mml:math id="M391" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M392" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">C</mml:mi><mml:mo>•</mml:mo></mml:msup><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">C</mml:mi><mml:mo>(</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="normal">O</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="normal">CH</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="normal">OOH</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">27.4</oasis:entry>
         <oasis:entry colname="col5">10.0</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M393" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.8</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M394" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> elimination</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M395" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mi mathvariant="normal">C</mml:mi><mml:mo>(</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="normal">O</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mi mathvariant="normal">CH</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">CHOH</mml:mi></mml:mrow></mml:math></inline-formula> + <inline-formula><mml:math id="M396" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">30.0</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M397" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.5</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M398" display="inline"><mml:mrow><mml:mn mathvariant="normal">6.1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e4216">
<inline-formula><mml:math id="M354" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula> estimated at <inline-formula><mml:math id="M355" display="inline"><mml:mn mathvariant="normal">0.01</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M356" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> by <xref ref-type="bibr" rid="bib1.bibx41" id="text.41"/>.</p></table-wrap-foot></table-wrap>

</sec>
<sec id="Ch1.S2.SS4">
  <title>Quantum-chemical calculations</title>
      <p id="d1e5135">A set of <inline-formula><mml:math id="M399" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-migration reactions for the main <inline-formula><mml:math id="M400" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>-derived peroxy
radicals was investigated by quantum chemical and theoretical kinetic
methodologies. The reactions studied included migration of hydroxyl,
<inline-formula><mml:math id="M401" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="italic">α</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>, and methyl <inline-formula><mml:math id="M402" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-atoms; direct <inline-formula><mml:math id="M403" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
elimination forming an enol was also investigated (Table <xref ref-type="table" rid="Ch1.T2"/>).</p>
      <p id="d1e5188">Several methodologies were applied, as detailed in the supporting
information. From these data, the M06-2X/cc-pVTZ rovibrational data
<xref ref-type="bibr" rid="bib1.bibx11 bib1.bibx60" id="paren.42"/>, with CCSD(T)/aug-schwartz4(DT) single point
energy calculations extrapolated to the basis set limit <xref ref-type="bibr" rid="bib1.bibx44 bib1.bibx36" id="paren.43"/> were selected. All quantum chemical calculations were performed
using the Gaussian-09 program suite <xref ref-type="bibr" rid="bib1.bibx12" id="paren.44"/>. The high-pressure
rate coefficients for each of the elementary processes was then calculated
using multi-conformer canonical transition state theory, MC-CTST
<xref ref-type="bibr" rid="bib1.bibx52 bib1.bibx61" id="paren.45"/> based on a rigid rotor harmonic oscillator
paradigm, an exhaustive search of the reactants and TS conformers, and
asymmetric Eckart tunnelling and WKB zero-curvature (ZCT) tunnelling. For the
1,4- and 1,6-<inline-formula><mml:math id="M404" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift in <inline-formula><mml:math id="M405" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, a large difference between
Eckart and ZCT tunnelling was found; the geometric average is reported here
(see Supplement).</p>

      <fig id="Ch1.F2" specific-use="star"><caption><p id="d1e5224">Time series of radicals, inorganic and organic species during the
MVK photooxidation for the high <inline-formula><mml:math id="M406" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment (20 August 2014)
together with results from model calculations applying MCM. Dark shaded areas
indicate the time before opening the chamber roof and vertical dashed line
times when trace gases were injected into the chamber. OH reactivity was not
measured during this experiment. <inline-formula><mml:math id="M407" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M408" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M409" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are
constrained to measurements in the model. <inline-formula><mml:math id="M410" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> loss rates (most lowest
right panel) are calculated from modelled <inline-formula><mml:math id="M411" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M412" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M413" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> concentrations. However, contributions from the reactions with
<inline-formula><mml:math id="M414" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M415" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M416" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are too small to be visible.
Modelled acetic acid concentrations are small compared to modelled
glycolaldehyde concentrations (measured together in the PTR-TOF-MS).</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/8001/2018/acp-18-8001-2018-f02.pdf"/>

        </fig>

      <fig id="Ch1.F3" specific-use="star"><caption><p id="d1e5347">Time series of radicals, inorganic and organic species during the
MVK photooxidation at low <inline-formula><mml:math id="M417" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> (23 May 2017) together with results from
model calculations applying MCM. Dark shaded areas indicate the time before
opening the chamber roof and vertical dashed line times when trace gases were
injected into the chamber. <inline-formula><mml:math id="M418" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> loss rates (most lowest right panel)
are calculated from modelled <inline-formula><mml:math id="M419" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M420" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M421" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
concentrations.</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/8001/2018/acp-18-8001-2018-f03.pdf"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S3">
  <title>Results</title>
<sec id="Ch1.S3.SS1">
  <title>Product yields</title>
      <?pagebreak page8007?><p id="d1e5417">The reaction of <inline-formula><mml:math id="M422" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M423" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> leads to the addition of <inline-formula><mml:math id="M424" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
to either one of the double-bonded <inline-formula><mml:math id="M425" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">C</mml:mi></mml:mrow></mml:math></inline-formula>-atoms so that two different
<inline-formula><mml:math id="M426" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radical species can be formed (Fig. <xref ref-type="fig" rid="Ch1.F1"/>):

                <disp-formula specific-use="rxnarray" content-type="numbered"><mml:math id="M427" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="R1"><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>→</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mo>(</mml:mo><mml:mi mathvariant="normal">yield</mml:mi><mml:mo>:</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="R2"><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>→</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>(</mml:mo><mml:mi mathvariant="normal">yield</mml:mi><mml:mo>:</mml:mo><mml:mn mathvariant="normal">0.7</mml:mn><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            Yields are from current recommendations <xref ref-type="bibr" rid="bib1.bibx2" id="paren.46"/> that are also used
in the MCM. The further reaction chain with <inline-formula><mml:math id="M428" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> gives glycolaldehyde
and an acetylperoxy radical for <inline-formula><mml:math id="M429" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and methylglyoxal,
formaldehyde and <inline-formula><mml:math id="M430" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M431" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. In the low <inline-formula><mml:math id="M432" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
experiment (23 May 2017), approximately 30 % of the <inline-formula><mml:math id="M433" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reacted
with <inline-formula><mml:math id="M434" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> assuming that the reaction with <inline-formula><mml:math id="M435" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was the only
competing reaction. In contrast, more than 90 % of <inline-formula><mml:math id="M436" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reacted with
<inline-formula><mml:math id="M437" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> in the high <inline-formula><mml:math id="M438" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment. Mixing ratios of the major
products formaldehyde, glycolaldeyde and methylglyoxal increased to 6, 8, and
1.3 <inline-formula><mml:math id="M439" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula>, respectively, in the high <inline-formula><mml:math id="M440" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment when
13 <inline-formula><mml:math id="M441" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> MVK was oxidised (Fig. <xref ref-type="fig" rid="Ch1.F2"/>). Less
of these products was observed in the low <inline-formula><mml:math id="M442" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment with
4.5 <inline-formula><mml:math id="M443" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> formaldehyde, 5 <inline-formula><mml:math id="M444" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> glycolaldehyde and
1 <inline-formula><mml:math id="M445" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> methylglyoxal (Fig. <xref ref-type="fig" rid="Ch1.F3"/>) when
17 <inline-formula><mml:math id="M446" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> MVK is oxidised. The smaller concentrations of these products
in the low <inline-formula><mml:math id="M447" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> case might be expected, because other products can be
formed in the competing <inline-formula><mml:math id="M448" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction channels
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><caption><p id="d1e5759">Yields of organic products from photooxidation of <inline-formula><mml:math id="M449" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> by OH
from this work and from the literature. Errors of values from this work take into
account the accuracy of measurements and precision of the calculation.
<inline-formula><mml:math id="M450" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HCHO</mml:mi></mml:mrow></mml:math></inline-formula> is not only produced in the first oxidation step of <inline-formula><mml:math id="M451" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>
but also produced in the subsequent oxidation of glycolaldehyde and
methylglyoxal. Therefore, the yield can increase over the course of the
experiment.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Species</oasis:entry>
         <oasis:entry colname="col2">Yield</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M458" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:mi mathvariant="normal">loss</mml:mi><mml:mo>(</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mi mathvariant="normal">loss</mml:mi><mml:mo>(</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">Reference</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M459" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.24</mml:mn><mml:mo>±</mml:mo><mml:msup><mml:mn mathvariant="normal">0.08</mml:mn><mml:mtext>a</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M460" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>:</mml:mo><mml:msup><mml:mn mathvariant="normal">1</mml:mn><mml:mtext>c</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">This work</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M461" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.46</mml:mn><mml:mo>±</mml:mo><mml:msup><mml:mn mathvariant="normal">0.04</mml:mn><mml:mtext>b</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M462" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>:</mml:mo><mml:msup><mml:mn mathvariant="normal">1</mml:mn><mml:mtext>c</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">This work</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M463" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HCHO</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M464" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.73</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.15</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M465" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">This work</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M466" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.54</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.04</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0:1</oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx51" id="text.47"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M467" display="inline"><mml:mn mathvariant="normal">0.28</mml:mn></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M468" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx22" id="text.48"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M469" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.05</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.02</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M470" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>:</mml:mo><mml:msup><mml:mn mathvariant="normal">1</mml:mn><mml:mtext>c</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">This work</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M471" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.04</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.01</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M472" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx43" id="text.49"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M473" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MGLYOX</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M474" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.19</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.03</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M475" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">This work</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M476" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.24</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.001</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M477" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx21" id="text.50"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M478" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.25</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.08</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M479" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx51" id="text.51"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M480" display="inline"><mml:mn mathvariant="normal">0.32</mml:mn></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M481" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx22" id="text.52"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M482" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.37</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.09</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M483" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>:</mml:mo><mml:msup><mml:mn mathvariant="normal">1</mml:mn><mml:mtext>c</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">This work</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M484" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.38</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M485" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx43" id="text.53"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M486" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.65</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.14</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M487" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">this work</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M488" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HOCH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">CHO</mml:mi></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M489" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.74</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.06</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M490" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx43" id="text.54"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M491" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.67</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.04</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M492" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx21" id="text.55"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M493" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.64</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.16</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M494" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx51" id="text.56"/>
                  </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M495" display="inline"><mml:mn mathvariant="normal">0.60</mml:mn></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M496" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">
                    <xref ref-type="bibr" rid="bib1.bibx22" id="text.57"/>
                  </oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e5786"><inline-formula><mml:math id="M452" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula> approximately after 1 h of
oxidation.  <inline-formula><mml:math id="M453" display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula> after 3 h of oxidation.  <inline-formula><mml:math id="M454" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula> <inline-formula><mml:math id="M455" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
contribution to the total <inline-formula><mml:math id="M456" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> loss: <inline-formula><mml:math id="M457" display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula>20 %.</p></table-wrap-foot></table-wrap>

      <p id="d1e6597">Because part of the products are oxidised during the experiment, a correction
procedure described in detail by <xref ref-type="bibr" rid="bib1.bibx21" id="text.58"/> and
<xref ref-type="bibr" rid="bib1.bibx27" id="text.59"/> is applied, in order to calculate products yields
originating from the oxidation of <inline-formula><mml:math id="M497" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>. This correction takes loss of
products due to the reaction with <inline-formula><mml:math id="M498" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> and photolysis into account and
also small production from chamber sources. The relationship between consumed
<inline-formula><mml:math id="M499" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> and corrected product concentrations gives the yield of the
product species (Table <xref ref-type="table" rid="Ch1.T3"/>, Fig. S3).</p>
      <?pagebreak page8008?><p id="d1e6633">For the high <inline-formula><mml:math id="M500" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment, when <inline-formula><mml:math id="M501" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> nearly exclusively
reacted with <inline-formula><mml:math id="M502" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>, the ratio of product yields for glycolaldehyde
(<inline-formula><mml:math id="M503" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.65</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.14</mml:mn></mml:mrow></mml:math></inline-formula>) and methylglyoxal (<inline-formula><mml:math id="M504" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.19</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.03</mml:mn></mml:mrow></mml:math></inline-formula>) can be related to the
branching ratio of the <inline-formula><mml:math id="M505" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> reaction with <inline-formula><mml:math id="M506" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
(Reactions <xref ref-type="disp-formula" rid="R1"/> and <xref ref-type="disp-formula" rid="R2"/>), because these products are
formed in either one of the two reaction channels. The values derived from
this experiment agree within their uncertainties with studies by
<xref ref-type="bibr" rid="bib1.bibx21" id="text.60"/>, <xref ref-type="bibr" rid="bib1.bibx51" id="text.61"/>, and <xref ref-type="bibr" rid="bib1.bibx43" id="text.62"/> all reporting lower
methylglyoxal yields than suggested by current recommendations
<xref ref-type="bibr" rid="bib1.bibx2" id="paren.63"/>. This indicates that the branching ratio assumed in the MCM
of 0.7 : 0.3 needs to be shifted towards <inline-formula><mml:math id="M507" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. <xref ref-type="bibr" rid="bib1.bibx43" id="text.64"/>
suggests a branching ratio of <inline-formula><mml:math id="M508" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.76</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>:</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mn mathvariant="normal">0.24</mml:mn></mml:mrow></mml:math></inline-formula>. The formaldehyde yield of
<inline-formula><mml:math id="M509" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.73</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.15</mml:mn></mml:mrow></mml:math></inline-formula> is higher than the methylglyoxal yield, because formaldehyde is
not only a co-product of methylglyoxal in the reaction chain of
<inline-formula><mml:math id="M510" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F1"/>), but can also be formed from
secondary products in the oxidation scheme of <inline-formula><mml:math id="M511" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>. This might also
explain why the <inline-formula><mml:math id="M512" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HCHO</mml:mi></mml:mrow></mml:math></inline-formula> yield in this chamber experiment is higher than
that in the study by <xref ref-type="bibr" rid="bib1.bibx51" id="text.65"/>. Product yields reported by
<xref ref-type="bibr" rid="bib1.bibx22" id="text.66"/> differ for all three species (largest difference for
formaldehyde) from the other studies for unclear reasons.</p>
      <p id="d1e6798">In the low <inline-formula><mml:math id="M513" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> case, other <inline-formula><mml:math id="M514" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction channels than reaction
with <inline-formula><mml:math id="M515" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> gain in importance. Lower yields of methylglyoxal
(<inline-formula><mml:math id="M516" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.05</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.002</mml:mn></mml:mrow></mml:math></inline-formula>) and glycolaldehyde (<inline-formula><mml:math id="M517" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.37</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.09</mml:mn></mml:mrow></mml:math></inline-formula>) compared to the high
<inline-formula><mml:math id="M518" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment are therefore found in this case. However, the relative
decrease of glycolaldehyde is much smaller than that of methylglyoxal. This
indicates that glycolaldehyde is also formed from other reaction channels
than the reaction of <inline-formula><mml:math id="M519" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M520" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>. This agrees with results
reported by <xref ref-type="bibr" rid="bib1.bibx43" id="text.67"/>. In that study, a glycolaldehyde yield of
<inline-formula><mml:math id="M521" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.38</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> was determined in experiments, in which <inline-formula><mml:math id="M522" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> exclusively
reacted with <inline-formula><mml:math id="M523" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Modelled and measured time series of radical concentrations</title>
      <p id="d1e6924">Time series of trace gas and radical concentrations are shown together with
model calculations using the MCM without modifications for one of the high
<inline-formula><mml:math id="M524" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiments (Fig. <xref ref-type="fig" rid="Ch1.F2"/>, 20 August 2014)
and for one of the low <inline-formula><mml:math id="M525" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiments (Fig. <xref ref-type="fig" rid="Ch1.F3"/>,
23 May 2017). Although the instrumentation that performed measurements in the
experiments were partly different specifically for experiments done in
different years, consistent results are obtained. In addition, parameters
that are measured by two instruments agree within their combined
uncertainties.</p>
      <p id="d1e6947"><inline-formula><mml:math id="M526" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> (12 <inline-formula><mml:math id="M527" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula>) was injected twice into the sunlit
chamber in the high <inline-formula><mml:math id="M528" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment
(Fig. <xref ref-type="fig" rid="Ch1.F2"/>). Approximately half of the <inline-formula><mml:math id="M529" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>
reacted away before the second <inline-formula><mml:math id="M530" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> addition was done. The <inline-formula><mml:math id="M531" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
mixing ratio decreased over the course of the experiment from nearly 6 to
0.5 <inline-formula><mml:math id="M532" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula>, but was sufficiently high that 90 % of <inline-formula><mml:math id="M533" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
reacted with <inline-formula><mml:math id="M534" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> for most of the time. <inline-formula><mml:math id="M535" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentrations ranged
from (2–4)<inline-formula><mml:math id="M536" display="inline"><mml:mrow><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M537" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> modulated by changes of the
<inline-formula><mml:math id="M538" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity and radiation. Model calculations of <inline-formula><mml:math id="M539" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>] agree
with measurements within 20 % at all times during the oxidation of
<inline-formula><mml:math id="M540" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>. This corresponds to a good description of the measured <inline-formula><mml:math id="M541" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>
concentration by the model (deviations less than 5 %) demonstrating that
the <inline-formula><mml:math id="M542" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentration fits the observed oxidation rate of <inline-formula><mml:math id="M543" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <?pagebreak page8009?><p id="d1e7114"><inline-formula><mml:math id="M544" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M545" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radical concentrations were rather small
(<inline-formula><mml:math id="M546" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">8</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M547" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) due to their fast loss in the presence of
high <inline-formula><mml:math id="M548" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>. Measured and modelled <inline-formula><mml:math id="M549" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations show good
agreement until the <inline-formula><mml:math id="M550" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratio decreased below <inline-formula><mml:math id="M551" display="inline"><mml:mn mathvariant="normal">0.5</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M552" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula>
(at 11:00, Fig <xref ref-type="fig" rid="Ch1.F2"/>). In the case of <inline-formula><mml:math id="M553" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>,
the model yields significantly larger concentrations than measurements. This
discrepancy is plausible due to the incomplete conversion of the peroxy
radical <inline-formula><mml:math id="M554" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in the pre-reactor. The transformation to <inline-formula><mml:math id="M555" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
requires more than one <inline-formula><mml:math id="M556" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> reaction step and therefore remains
incomplete during the transit through the reactor. If the modelled
concentration of <inline-formula><mml:math id="M557" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> is subtracted from the total modelled
<inline-formula><mml:math id="M558" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>, good model–measurement agreement is obtained.</p>
      <p id="d1e7286">Overall, the good agreement between modelled and measured radical
concentrations demonstrates that radical chemistry during the oxidation of
<inline-formula><mml:math id="M559" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> is well described by state-of-the-art chemical models, if
<inline-formula><mml:math id="M560" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals are mainly lost in the reaction with <inline-formula><mml:math id="M561" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e7317">In the low <inline-formula><mml:math id="M562" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment (Fig. <xref ref-type="fig" rid="Ch1.F3"/>),
approximately 20 <inline-formula><mml:math id="M563" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> of <inline-formula><mml:math id="M564" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> was injected, before
photooxidation started. As a consequence of the low <inline-formula><mml:math id="M565" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
(<inline-formula><mml:math id="M566" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M567" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">pptv</mml:mi></mml:mrow></mml:math></inline-formula>), <inline-formula><mml:math id="M568" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals formed in the reaction of
<inline-formula><mml:math id="M569" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M570" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> not only reacted with <inline-formula><mml:math id="M571" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>, but reaction with
<inline-formula><mml:math id="M572" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M573" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> were competitive. Model calculations using the
MCM (Fig. <xref ref-type="fig" rid="Ch1.F3"/>) suggest that at least half of the
<inline-formula><mml:math id="M574" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reacted with <inline-formula><mml:math id="M575" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and a smaller fraction (10 to 20 %)
with other <inline-formula><mml:math id="M576" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals.</p>
      <p id="d1e7466">After nearly 6 h of oxidation, only 4 <inline-formula><mml:math id="M577" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">ppbv</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M578" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> was left in
the presence of (2–4)<inline-formula><mml:math id="M579" display="inline"><mml:mrow><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M580" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M581" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>. The amount of
<inline-formula><mml:math id="M582" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> that is injected in the model is adjusted to the increase in
<inline-formula><mml:math id="M583" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity during the time of injection. The 10 % discrepancy to
measured <inline-formula><mml:math id="M584" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> mixing ratios is within the uncertainty of the PTR-TOF-MS
calibration. However, the decay of the measured <inline-formula><mml:math id="M585" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">MVK</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> is slightly
faster than the decay in the model specifically during the first 2 h of
oxidation. This corresponds to modelled <inline-formula><mml:math id="M586" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentrations, which are
up to a factor of 2 smaller than measured <inline-formula><mml:math id="M587" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentrations during
this time. At later times of the experiment, measured and modelled
<inline-formula><mml:math id="M588" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> as well as the relative change in <inline-formula><mml:math id="M589" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">MVK</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> are matched.
Differences between measured and modelled <inline-formula><mml:math id="M590" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentrations in the
first phase of the experiment are accompanied by <inline-formula><mml:math id="M591" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations,
which are approximately <inline-formula><mml:math id="M592" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">8</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M593" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> lower in the model
compared to measured values. Measured <inline-formula><mml:math id="M594" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> increased from
(4–8)<inline-formula><mml:math id="M595" display="inline"><mml:mrow><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">8</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M596" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> during the first 2 h. Modelled values
match measurements at later times of the experiment like observed for
<inline-formula><mml:math id="M597" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>. The concurrent underestimation of <inline-formula><mml:math id="M598" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M599" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>
suggests that a radical source is missing in the model.</p>
      <p id="d1e7728">In a sensitivity run (MCM*), modifications of reactions that are reported in
literature, but do not directly affect the fate of <inline-formula><mml:math id="M600" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are
implemented:
<list list-type="bullet"><list-item>
      <p id="d1e7744">The reaction rate constant of glycolaldehyde with <inline-formula><mml:math id="M601" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> is lowered by 20 % following measurements by <xref ref-type="bibr" rid="bib1.bibx29" id="text.68"/>.</p></list-item><list-item>
      <p id="d1e7759">Following the results of the product analysis (see above), the branching ratio of Reaction (<xref ref-type="disp-formula" rid="R1"/>) and
<xref ref-type="disp-formula" rid="R2"/> is changed from <inline-formula><mml:math id="M602" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.3</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">0.7</mml:mn></mml:mrow></mml:math></inline-formula>  to <inline-formula><mml:math id="M603" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.24</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">0.76</mml:mn></mml:mrow></mml:math></inline-formula> as suggested by <xref ref-type="bibr" rid="bib1.bibx43" id="text.69"/>.</p></list-item><list-item>
      <p id="d1e7794"><inline-formula><mml:math id="M604" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> yield from ozonolysis of <inline-formula><mml:math id="M605" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> is lowered to 16 % as determined by
<xref ref-type="bibr" rid="bib1.bibx1" id="text.70"/> and <xref ref-type="bibr" rid="bib1.bibx40" id="text.71"/> compared to 36 % assumed in the MCM.</p></list-item></list></p>
      <p id="d1e7818">Details are listed in Table <xref ref-type="table" rid="Ch1.T1"/>. Differences with results with
the current version of the MCM are rather small (not shown here) so that
these modifications do not significantly affect the model–measurement
agreement. They are included in the sensitivities model runs shown below.</p>

      <fig id="Ch1.F4" specific-use="star"><caption><p id="d1e7824">Time series of radicals, inorganic and organic species during the
MVK photooxidation at low <inline-formula><mml:math id="M606" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> (experiment on 23 May 2017). Dark shaded
areas indicate the time before opening the chamber roof and vertical dashed
line times when trace gases were injected into the chamber. Model sensitivity
runs M1 and M2 include modifications listed in Table <xref ref-type="table" rid="Ch1.T1"/>.</p></caption>
          <?xmltex \igopts{width=455.244094pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/8001/2018/acp-18-8001-2018-f04.pdf"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S4">
  <title>Discussion</title>
<sec id="Ch1.S4.SS1">
  <?xmltex \opttitle{Additional {$\protect\chem{RO_{2}}$}\,$+$\,{$\protect\chem{HO_{2}}$} reactions}?><title>Additional <inline-formula><mml:math id="M607" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M608" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M609" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reactions</title>
      <p id="d1e7885">Product yields indicate that an additional source for glycolaldehyde that is
not included in the MCM is required to explain observations in the low
<inline-formula><mml:math id="M610" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment. This is consistent with chamber experiments by
<xref ref-type="bibr" rid="bib1.bibx43" id="text.72"/>, which were performed under conditions that <inline-formula><mml:math id="M611" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
exclusively reacted with <inline-formula><mml:math id="M612" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. In this case, the glycolaldehyde yield
is expected to be small, because glycolaldehyde is mainly formed in the
subsequent reaction of <inline-formula><mml:math id="M613" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M614" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F1"/>). In
that study, also a <inline-formula><mml:math id="M615" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">diketone</mml:mi></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M616" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CH</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">COCOCH</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>, MCM
name: <inline-formula><mml:math id="M617" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BIACETOH</mml:mi></mml:mrow></mml:math></inline-formula>) was measured with a yield of 0.14. From these product
yields, the authors suggest that there are reaction channels of the
<inline-formula><mml:math id="M618" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> plus <inline-formula><mml:math id="M619" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction in addition to the formation of
hydroxyperoxides <xref ref-type="bibr" rid="bib1.bibx43" id="paren.73"/>:

                <disp-formula specific-use="rxnarray" content-type="numbered"><mml:math id="M620" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>→</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:mi mathvariant="normal">HMVKBOOH</mml:mi></mml:mrow></mml:mrow></mml:mtd><mml:mtd/></mml:mtr><mml:mlabeledtr id="R3"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>(</mml:mo><mml:mi mathvariant="normal">yield</mml:mi><mml:mo>:</mml:mo><mml:mn mathvariant="normal">0.34</mml:mn><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd/></mml:mlabeledtr><mml:mtr><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>→</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:mi mathvariant="normal">HMVKBO</mml:mi></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:mrow></mml:mtd><mml:mtd/></mml:mtr><mml:mlabeledtr id="R4"><mml:mtd/><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>(</mml:mo><mml:mi mathvariant="normal">yield</mml:mi><mml:mo>:</mml:mo><mml:mn mathvariant="normal">0.48</mml:mn><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd/></mml:mlabeledtr><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>→</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:mi mathvariant="normal">BIACETOH</mml:mi></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mrow></mml:mtd><mml:mtd/></mml:mtr><mml:mlabeledtr id="R5"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>(</mml:mo><mml:mi mathvariant="normal">yield</mml:mi><mml:mo>:</mml:mo><mml:mn mathvariant="normal">0.18</mml:mn><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd><mml:mtd/></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>
      <?pagebreak page8010?><p id="d1e8176">Including Reactions (<xref ref-type="disp-formula" rid="R3"/>)–(<xref ref-type="disp-formula" rid="R5"/>) in the MCM* mechanism
(M1 Table <xref ref-type="table" rid="Ch1.T1"/>) results in an improved description of
observations for the low <inline-formula><mml:math id="M621" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment
(Fig. <xref ref-type="fig" rid="Ch1.F4"/>). Modelled <inline-formula><mml:math id="M622" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> agrees with
measurements within 20 %. The largest increase of modelled <inline-formula><mml:math id="M623" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> is
obtained 1 to 2 h after starting the oxidation due to the additional
radical regeneration from Reactions (<xref ref-type="disp-formula" rid="R4"/>) and (<xref ref-type="disp-formula" rid="R5"/>).
The model–measurement agreement is worsened for <inline-formula><mml:math id="M624" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> compared to
the MCM model run, but still within the uncertainty of the measurement. The
additional production of glycolaldehyde from the subsequent chemistry of
Reaction (<xref ref-type="disp-formula" rid="R4"/>) brings modelled organic product species into
agreement with measurements within 20 % so that all observations except for
<inline-formula><mml:math id="M625" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> can be explained by the new reactions of <inline-formula><mml:math id="M626" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with
<inline-formula><mml:math id="M627" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. <inline-formula><mml:math id="M628" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations, however, are still significantly
lower in the model compared to measurements. Results are consistent with
experiments by <xref ref-type="bibr" rid="bib1.bibx43" id="text.74"/>, but a potential underestimation of
<inline-formula><mml:math id="M629" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> could not be recognised, because <inline-formula><mml:math id="M630" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radicals were not
measured in their experiments.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <?xmltex \opttitle{{$\protect\chem{RO_{2}}$} isomerisation reactions}?><title><inline-formula><mml:math id="M631" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> isomerisation reactions</title>
      <p id="d1e8337"><inline-formula><mml:math id="M632" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> isomerisation reactions have been shown to be of importance for
the atmospheric fate of <inline-formula><mml:math id="M633" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from isoprene <xref ref-type="bibr" rid="bib1.bibx42" id="paren.75"/>.
<xref ref-type="bibr" rid="bib1.bibx41" id="text.76"/> also suggested from quantum-chemical calculations that
<inline-formula><mml:math id="M634" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> undergoes a fast 1,5-<inline-formula><mml:math id="M635" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula> shift with subsequent
decomposition (Fig. <xref ref-type="fig" rid="Ch1.F1"/> and Table <xref ref-type="table" rid="Ch1.T1"/>):

                <disp-formula id="R6" content-type="numbered reaction"><mml:math id="M636" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mrow><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>→</mml:mo></mml:mrow><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:mi mathvariant="normal">MGLYOX</mml:mi></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">HCHO</mml:mi></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <p id="d1e8424">Here, the possibility of <inline-formula><mml:math id="M637" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> isomerisation reactions for both major
<inline-formula><mml:math id="M638" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> species formed from the reaction of <inline-formula><mml:math id="M639" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M640" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
were investigated in detail by means of quantum-chemical calculations.</p>
      <p id="d1e8465">Table <xref ref-type="table" rid="Ch1.T2"/> shows the reaction pathways that were examined for the
<inline-formula><mml:math id="M641" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M642" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> peroxy radicals. More information can be
found in the Supplement. For both radicals,
1,5-<inline-formula><mml:math id="M643" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-migration of the hydroxyl <inline-formula><mml:math id="M644" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-atom is energetically most
favourable with a barrier of 22 <inline-formula><mml:math id="M645" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">kcal</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M646" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">mol</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>. The predicted
reaction rate constant remains below <inline-formula><mml:math id="M647" display="inline"><mml:mrow><mml:mn mathvariant="normal">5</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M648" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, mostly
due to limited tunnelling owing to the large reaction endothermicity, and the
broad energy barrier protruding less than 2 <inline-formula><mml:math id="M649" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">kcal</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M650" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">mol</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
above the reaction products. The concomitant low energy barrier for the
reverse <inline-formula><mml:math id="M651" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-migration in the product implies that the reaction might be
competitive against the alkoxy product decomposition with estimated barriers
4 <inline-formula><mml:math id="M652" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">kcal</mml:mi></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M653" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">mol</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx53" id="paren.77"/>. Most of the other
reactions considered are several orders of magnitude slower and can be
neglected. The predicted rates for all processes considered remain over an
order of magnitude below that required to fit the measured <inline-formula><mml:math id="M654" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M655" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and glycolaldehyde concentrations so that these
<inline-formula><mml:math id="M656" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-migration reactions do not have a discernible impact on the
<inline-formula><mml:math id="M657" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> oxidation chemistry radical budget or product yields at room
temperature. As such, the subsequent chemistry after these reactions was not
investigated.</p>
      <?pagebreak page8011?><p id="d1e8655">The isomerisation rate constant estimated by <xref ref-type="bibr" rid="bib1.bibx41" id="text.78"/> for
Reaction (<xref ref-type="disp-formula" rid="R6"/>) of 0.01 <inline-formula><mml:math id="M658" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> is about two orders of
magnitude faster than calculated here. This is mainly related to the higher
energy barriers found at the levels of theory applied in this work. The small
reaction rate constant for this reaction is consistent with the small product
yield for methylglyoxal found in the low <inline-formula><mml:math id="M659" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment, which would
need to be significantly higher than calculated, if Reaction (<xref ref-type="disp-formula" rid="R6"/>)
was competitive with the other <inline-formula><mml:math id="M660" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction channels. A similar
conclusion was drawn from product yields obtained in the study by
<xref ref-type="bibr" rid="bib1.bibx43" id="text.79"/>.</p>
      <p id="d1e8703">The fastest reaction rate coefficient of <inline-formula><mml:math id="M661" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> isomerisation reactions
calculated here is found to be the <inline-formula><mml:math id="M662" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> 1,4-<inline-formula><mml:math id="M663" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-migration of
the hydrogen atoms adjacent to the <inline-formula><mml:math id="M664" display="inline"><mml:mrow class="chem"><mml:mo>-</mml:mo><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> group, followed by <inline-formula><mml:math id="M665" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>
abstraction at the <inline-formula><mml:math id="M666" display="inline"><mml:mrow class="chem"><mml:mo>-</mml:mo><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> site by <inline-formula><mml:math id="M667" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> forming <inline-formula><mml:math id="M668" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> together
with a bi-ketone (named <inline-formula><mml:math id="M669" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">BIACETOOH</mml:mi></mml:mrow></mml:math></inline-formula> in the MCM):

                <disp-formula id="R7" content-type="numbered reaction"><mml:math id="M670" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>→</mml:mo></mml:mrow><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">BIACETOOH</mml:mi></mml:mrow><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <p id="d1e8838">A reaction rate constant of 0.003 <inline-formula><mml:math id="M671" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> is calculated making this
reaction competitive with the reaction of <inline-formula><mml:math id="M672" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M673" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M674" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> in the low <inline-formula><mml:math id="M675" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiments. Approximately 20 to 30 % of
the <inline-formula><mml:math id="M676" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HVMKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> undergoes the 1,4-<inline-formula><mml:math id="M677" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula> shift reaction in this
experiment. However, the resulting increase of the <inline-formula><mml:math id="M678" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration
is rather small (<inline-formula><mml:math id="M679" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">8</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M680" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">cm</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) because of the small
<inline-formula><mml:math id="M681" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> yield in the reaction of <inline-formula><mml:math id="M682" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M683" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>. This
reaction is included in the model sensitivity runs M2.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <?xmltex \opttitle{Potential additional {$\protect\chem{RO_{2}}$} reaction channel}?><title>Potential additional <inline-formula><mml:math id="M684" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction channel</title>
      <p id="d1e9001">A fast conversion of <inline-formula><mml:math id="M685" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M686" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> would be required to fit
<inline-formula><mml:math id="M687" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> measurements. Glycolaldehyde would need to be a co-product to
match measured values:

                <disp-formula id="R8" content-type="numbered reaction"><mml:math id="M688" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">X</mml:mi></mml:mrow><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>→</mml:mo></mml:mrow><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>+</mml:mo><mml:mtext>products</mml:mtext></mml:mrow></mml:math></disp-formula></p>
      <p id="d1e9074"><inline-formula><mml:math id="M689" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">X</mml:mi></mml:mrow></mml:math></inline-formula> represents an unknown reaction partner not needed in case of a
unimolecular reaction. M2 in Fig. <xref ref-type="fig" rid="Ch1.F4"/> gives the model
result, if Reaction (<xref ref-type="disp-formula" rid="R8"/>) is included in the MCM* in addition to
the 1,4-<inline-formula><mml:math id="M690" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula> shift of <inline-formula><mml:math id="M691" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (Reaction <xref ref-type="disp-formula" rid="R7"/>) and
the additional channels of the reaction of <inline-formula><mml:math id="M692" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M693" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
(Reactions <xref ref-type="disp-formula" rid="R3"/>–<xref ref-type="disp-formula" rid="R5"/>).</p>
      <p id="d1e9136">In order to fit <inline-formula><mml:math id="M694" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and glycolaldehyde concentration measurements, a
reaction rate constant of <inline-formula><mml:math id="M695" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.006</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.004</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M696" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> is required. This
reaction rate makes the Reaction (<xref ref-type="disp-formula" rid="R8"/>) competitive with the
reaction of <inline-formula><mml:math id="M697" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M698" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> (reaction rate approximately
<inline-formula><mml:math id="M699" display="inline"><mml:mn mathvariant="normal">0.004</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M700" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) and <inline-formula><mml:math id="M701" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (reaction rate approximately
<inline-formula><mml:math id="M702" display="inline"><mml:mn mathvariant="normal">0.008</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M703" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>). In M2, 40 % of <inline-formula><mml:math id="M704" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reacts with
<inline-formula><mml:math id="M705" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and 30 % of <inline-formula><mml:math id="M706" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> forms directly <inline-formula><mml:math id="M707" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and
glycolaldehyde in Reaction (<xref ref-type="disp-formula" rid="R8"/>) for conditions of this
experiment. In comparison, 60 % of <inline-formula><mml:math id="M708" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reacts with <inline-formula><mml:math id="M709" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
in the model run M1. However, the overall effect on the <inline-formula><mml:math id="M710" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> is
similar in both model runs so that modelled <inline-formula><mml:math id="M711" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> becomes consistent
with measurements. This is due to the conversion of <inline-formula><mml:math id="M712" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> produced in
Reaction (<xref ref-type="disp-formula" rid="R8"/>) to <inline-formula><mml:math id="M713" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>. Overall, however, the major
difference in the results of M1 and M2 is in the improved model–measurement
agreement of <inline-formula><mml:math id="M714" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e9382">Unfortunately, experiments here do not give hints about the exact nature of
Reaction (<xref ref-type="disp-formula" rid="R8"/>). Quantum-chemical calculations (see above) shows
that Reaction (<xref ref-type="disp-formula" rid="R8"/>) cannot be a unimolecular reaction such as
<inline-formula><mml:math id="M715" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-atom migration, because they are not fast enough to compete with
other <inline-formula><mml:math id="M716" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction channels. Photolysis of <inline-formula><mml:math id="M717" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> that could
results in <inline-formula><mml:math id="M718" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> have been observed for acetylperoxy radicals
<xref ref-type="bibr" rid="bib1.bibx5" id="paren.80"/> and isoprene derived <inline-formula><mml:math id="M719" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx24" id="paren.81"/>. However,
the reaction rate constant of <inline-formula><mml:math id="M720" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.006</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.004</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M721" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> needed here to
explain observations would require an unrealistically high absorption cross
section. A reaction partner in Reaction (<xref ref-type="disp-formula" rid="R8"/>) could also be a
<inline-formula><mml:math id="M722" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> radical. However, in this case products of the <inline-formula><mml:math id="M723" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
plus <inline-formula><mml:math id="M724" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction that are assumed in the MCM would need to be
changed according to Reaction (<xref ref-type="disp-formula" rid="R8"/>) and the reaction rate constant
would need to be increased by a large factor of 20 to 50 compared to
recommendations for <inline-formula><mml:math id="M725" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> self-reaction rate constants in order to make
this reaction competitive with the other <inline-formula><mml:math id="M726" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction channels.</p>
</sec>
<sec id="Ch1.S4.SS4">
  <title>Model–measurement agreement of nitrogen oxide species</title>
      <p id="d1e9545">So far, only radicals and organic products have been discussed. However,
there is also disagreement between measured and modelled <inline-formula><mml:math id="M727" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing
ratios. The <inline-formula><mml:math id="M728" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration produced by the model is 30 % smaller
in the low <inline-formula><mml:math id="M729" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> experiment (23 May 2017)) compared to measured values.
This discrepancy increases to 40 %, if the <inline-formula><mml:math id="M730" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentration and
therefore the <inline-formula><mml:math id="M731" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> oxidation rate is increased. This is due to the
increased production of peroxy radicals, which form peroxy acyl nitrate
(<inline-formula><mml:math id="M732" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PAN</mml:mi></mml:mrow></mml:math></inline-formula>) or <inline-formula><mml:math id="M733" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PAN</mml:mi></mml:mrow></mml:math></inline-formula> like species, which act as nitrogen oxide
reservoirs. Acetylperoxy radicals forming <inline-formula><mml:math id="M734" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PAN</mml:mi></mml:mrow></mml:math></inline-formula> are mainly produced from
<inline-formula><mml:math id="M735" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HVMKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> as a co-product of glycolaldehyde, but another
<inline-formula><mml:math id="M736" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PAN</mml:mi></mml:mrow></mml:math></inline-formula>-like species (MCM name <inline-formula><mml:math id="M737" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PHAN</mml:mi></mml:mrow></mml:math></inline-formula>) is additionally produced by
the oxidation of glycolaldehyde. If no production of <inline-formula><mml:math id="M738" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PHAN</mml:mi></mml:mrow></mml:math></inline-formula> is assumed,
measured and modelled <inline-formula><mml:math id="M739" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> mixing ratios agree within 100 <inline-formula><mml:math id="M740" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">pptv</mml:mi></mml:mrow></mml:math></inline-formula>
(M2 in Fig. <xref ref-type="fig" rid="Ch1.F4"/>), less than the accuracy of the
<inline-formula><mml:math id="M741" display="inline"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> formation in the chamber. However, also reduction of the
production of acetylperoxy radicals could improve the model–measurement
agreement. The change in <inline-formula><mml:math id="M742" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> and peroxy radical concentrations is
rather small, because of the suppression of <inline-formula><mml:math id="M743" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> by <inline-formula><mml:math id="M744" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and the
overall small turnover rate of <inline-formula><mml:math id="M745" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M746" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>. More specific
experiments concerning the <inline-formula><mml:math id="M747" display="inline"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> budget would be required to decide,
which <inline-formula><mml:math id="M748" display="inline"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> reservoir species is overestimated by the model.</p>

      <fig id="Ch1.F5"><caption><p id="d1e9760"><inline-formula><mml:math id="M749" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> budget during the experiment at low <inline-formula><mml:math id="M750" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
concentration (23 May 2017) for the period, when <inline-formula><mml:math id="M751" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> photooxidation
took place. The vertical dashed line indicates when <inline-formula><mml:math id="M752" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> was reinjected
into the chamber. Red and blue coloured areas add contributions to the
<inline-formula><mml:math id="M753" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production calculated from the model results (M2 sensitivity run in
Fig. <xref ref-type="fig" rid="Ch1.F4"/>). The contribution <inline-formula><mml:math id="M754" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M755" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> <inline-formula><mml:math id="M756" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
refers to the <inline-formula><mml:math id="M757" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production from Reaction (<xref ref-type="disp-formula" rid="R4"/>). In
addition to modelled <inline-formula><mml:math id="M758" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production contributions, total OH production
calculated from the product of <inline-formula><mml:math id="M759" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentration and <inline-formula><mml:math id="M760" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
reactivity (<inline-formula><mml:math id="M761" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">OH</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) is shown. These quantities are either taken
from the model results (M2) or from measurements. The coloured grey area
gives the uncertainty of the total <inline-formula><mml:math id="M762" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production calculation, if
measured <inline-formula><mml:math id="M763" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentrations and measured <inline-formula><mml:math id="M764" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity are used.</p></caption>
          <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/8001/2018/acp-18-8001-2018-f05.pdf"/>

        </fig>

</sec>
<sec id="Ch1.S4.SS5">
  <?xmltex \opttitle{{$\protect\chem{OH}$} budget analysis}?><title><inline-formula><mml:math id="M765" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> budget analysis</title>
      <?pagebreak page8012?><p id="d1e9925"><inline-formula><mml:math id="M766" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> is in steady state because of its short lifetime, so that its rates
of production and destruction are equal. Therefore, <inline-formula><mml:math id="M767" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity
together with <inline-formula><mml:math id="M768" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentration measurements allows determination of
the total <inline-formula><mml:math id="M769" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production rate from only two measured quantities. Under
conditions with high <inline-formula><mml:math id="M770" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> concentrations, only few chemical reactions
are typically controlling the <inline-formula><mml:math id="M771" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production. The dominating process is
usually the recycling of <inline-formula><mml:math id="M772" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> by its reaction with <inline-formula><mml:math id="M773" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>. In
addition, photolysis of ozone and <inline-formula><mml:math id="M774" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HONO</mml:mi></mml:mrow></mml:math></inline-formula> make significant contributions.
For low <inline-formula><mml:math id="M775" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> conditions and in the presence of high VOC concentrations,
field and chamber experiments often show larger total <inline-formula><mml:math id="M776" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> productions
rates (derived from measured <inline-formula><mml:math id="M777" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M778" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity) than can be
explained by the above processes. Under these conditions, other <inline-formula><mml:math id="M779" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
sources linked to the degradation of VOCs become relevant.</p>
      <p id="d1e10044">Figure <xref ref-type="fig" rid="Ch1.F5"/> shows the <inline-formula><mml:math id="M780" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> budget for the low <inline-formula><mml:math id="M781" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
experiment (23 May 2017) using model results (M2, Table <xref ref-type="table" rid="Ch1.T1"/>)
to calculate contributions to the <inline-formula><mml:math id="M782" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production. In addition, total
<inline-formula><mml:math id="M783" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production is calculated from measured and modelled <inline-formula><mml:math id="M784" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
concentrations and <inline-formula><mml:math id="M785" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity. Results from calculations using
either modelled or measured values give similar numbers that agree within the
uncertainty of the calculation of 20 %.</p>
      <p id="d1e10100">The <inline-formula><mml:math id="M786" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production rate is dominated by <inline-formula><mml:math id="M787" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> recycling reactions
and primary <inline-formula><mml:math id="M788" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production (<inline-formula><mml:math id="M789" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">HONO</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M790" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> photolysis).
These contributions explain 70 to 80 % of the total <inline-formula><mml:math id="M791" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production
during the <inline-formula><mml:math id="M792" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> oxidation. The model would give lower <inline-formula><mml:math id="M793" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
production compared to calculations using measurements if
Reaction (<xref ref-type="disp-formula" rid="R8"/>) was not included because <inline-formula><mml:math id="M794" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations
and therefore <inline-formula><mml:math id="M795" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> recycling by <inline-formula><mml:math id="M796" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> would be underpredicted in
this case. This reaction is responsible for approximately half of the
<inline-formula><mml:math id="M797" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration during the first 2 h of <inline-formula><mml:math id="M798" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> oxidation.
This demonstrates the importance of including all <inline-formula><mml:math id="M799" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> sources in models.</p>
      <p id="d1e10237">Another 10 to 15 % of the total <inline-formula><mml:math id="M800" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production rate is due to the
<inline-formula><mml:math id="M801" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> formation from the additional <inline-formula><mml:math id="M802" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> plus <inline-formula><mml:math id="M803" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction
channel suggested by <xref ref-type="bibr" rid="bib1.bibx43" id="text.82"/> (Reaction <xref ref-type="disp-formula" rid="R4"/>). A large
number of other <inline-formula><mml:math id="M804" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> forming reactions included in the model such as
photolysis of hydroxyperoxides fills the remaining gap between these major
contributions and the total calculated <inline-formula><mml:math id="M805" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> production.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <title>Summary and conclusions</title>
      <p id="d1e10308">The photooxidation of <inline-formula><mml:math id="M806" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>, one
of the major oxidation products of isoprene, was investigated at atmospheric
conditions in the simulation chamber SAPHIR. <inline-formula><mml:math id="M807" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> was varied from high
to low concentrations. For high <inline-formula><mml:math id="M808" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M809" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is mainly lost in the
reaction with <inline-formula><mml:math id="M810" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> and current chemical models can describe radical
concentrations within 20 %. Product yields of the major oxidation products
glycolaldehyde (<inline-formula><mml:math id="M811" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.65</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.14</mml:mn></mml:mrow></mml:math></inline-formula>) and methylglyoxal (<inline-formula><mml:math id="M812" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.19</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.03</mml:mn></mml:mrow></mml:math></inline-formula>) are
consistent with previous measurements <xref ref-type="bibr" rid="bib1.bibx51 bib1.bibx21 bib1.bibx43" id="paren.83"/>.</p>
      <p id="d1e10382"><inline-formula><mml:math id="M813" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> radical concentrations are underestimated (maximum factor 2) by the
MCM at low <inline-formula><mml:math id="M814" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula> concentrations (<inline-formula><mml:math id="M815" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M816" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">pptv</mml:mi></mml:mrow></mml:math></inline-formula>), when other
<inline-formula><mml:math id="M817" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction channels can compete with the reaction of <inline-formula><mml:math id="M818" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
with <inline-formula><mml:math id="M819" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>. At the same time, also <inline-formula><mml:math id="M820" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and glycolaldehyde
concentrations are smaller in the model compared to measurements. Only part
of the model–measurements discrepancies can be explained by findings in
recent studies investigating the <inline-formula><mml:math id="M821" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> photooxidation. The higher
glycolaldehyde yield is consistent with a study by <xref ref-type="bibr" rid="bib1.bibx43" id="text.84"/>. The
additional channels for the <inline-formula><mml:math id="M822" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> plus <inline-formula><mml:math id="M823" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction suggested
by these authors can reproduce glycolaldehyde and <inline-formula><mml:math id="M824" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentrations,
but do not explain the model–measurement discrepancy for <inline-formula><mml:math id="M825" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e10517">The possibility of <inline-formula><mml:math id="M826" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> isomerisation reactions for both major
<inline-formula><mml:math id="M827" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> species formed from the reaction of <inline-formula><mml:math id="M828" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M829" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
were investigated in detail by means of quantum-chemical calculations.
Additional <inline-formula><mml:math id="M830" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> can be produced from the 1,4-<inline-formula><mml:math id="M831" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula> shift reaction
of <inline-formula><mml:math id="M832" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HVMKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. The reaction rate constant of <inline-formula><mml:math id="M833" display="inline"><mml:mn mathvariant="normal">0.003</mml:mn></mml:math></inline-formula> <inline-formula><mml:math id="M834" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> is
competitive with other <inline-formula><mml:math id="M835" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction channels at low <inline-formula><mml:math id="M836" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
conditions. The overall impact, however, is small due to the small
<inline-formula><mml:math id="M837" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKAO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> yield. Other reactions considered here can be neglected for
atmospheric conditions. This also includes the isomerisation reaction
suggested by <xref ref-type="bibr" rid="bib1.bibx41" id="text.85"/> (Reaction <xref ref-type="disp-formula" rid="R6"/>). The rate constant
for this reaction is about two orders of magnitude smaller than calculated by
<xref ref-type="bibr" rid="bib1.bibx41" id="text.86"/> due to the higher energy barriers found at the higher
levels of theory applied in this work.</p>
      <?pagebreak page8013?><p id="d1e10649">Because <inline-formula><mml:math id="M838" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and glycolaldehyde concentrations are underestimated at
the same time, a reaction that converts <inline-formula><mml:math id="M839" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M840" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and
glycolaldehyde (Reaction <xref ref-type="disp-formula" rid="R8"/>) would explain observations in
these experiments. A reaction rate constant of <inline-formula><mml:math id="M841" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.006</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.004</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M842" display="inline"><mml:mrow class="unit"><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
is required to bring measured and modelled values into agreement.
Unimolecular <inline-formula><mml:math id="M843" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">H</mml:mi></mml:mrow></mml:math></inline-formula>-shift reactions are found to be too slow.
Alternatively, reaction of <inline-formula><mml:math id="M844" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M845" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> that would
produce directly <inline-formula><mml:math id="M846" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and glycolaldehyde would explain <inline-formula><mml:math id="M847" display="inline"><mml:mrow class="chem"><mml:mo>[</mml:mo><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>
observations and would give similar <inline-formula><mml:math id="M848" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> and glycolaldehyde
concentrations as the mechanism by <xref ref-type="bibr" rid="bib1.bibx43" id="text.87"/>. However, more than the product species would need to be different from what is described in the MCM,
but also the reaction rate constants would need to be increased by a large
factor of 20 to 50 for the <inline-formula><mml:math id="M849" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HMVKBO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> plus <inline-formula><mml:math id="M850" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> reaction. More
studies will be needed to explore the exact role of <inline-formula><mml:math id="M851" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in the
<inline-formula><mml:math id="M852" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> oxidation scheme. In addition, open questions remain concerning
the fate of nitrogen oxides in the <inline-formula><mml:math id="M853" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> oxidation scheme. The MCM
suggests the built-up of nitrogen oxide reservoirs by the formation of
<inline-formula><mml:math id="M854" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PAN</mml:mi></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M855" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">PAN</mml:mi></mml:mrow></mml:math></inline-formula>-like species. Experiments here indicate that these
reservoirs are less important.</p>
      <p id="d1e10849">The need for an additional <inline-formula><mml:math id="M856" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> source was also found in the oxidation
of monoterpenes. Field studies, in which <inline-formula><mml:math id="M857" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> reactivity was dominated
by monoterpenes, showed that models underestimate <inline-formula><mml:math id="M858" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M859" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
concentrations <xref ref-type="bibr" rid="bib1.bibx30 bib1.bibx25" id="paren.88"/>. A chamber study investigating the
photochemistry of <inline-formula><mml:math id="M860" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="italic">β</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">pinene</mml:mi></mml:mrow></mml:math></inline-formula> found that an additional <inline-formula><mml:math id="M861" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
source is required to explain observed <inline-formula><mml:math id="M862" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M863" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> and
suggested a rearrangement of radical intermediates as explanation
<xref ref-type="bibr" rid="bib1.bibx27" id="paren.89"/>.</p>
      <p id="d1e10939">The impact on the <inline-formula><mml:math id="M864" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> recycling efficiency and observed organic
products in the <inline-formula><mml:math id="M865" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> oxidation are the same regardless whether
<inline-formula><mml:math id="M866" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> is directly produced from <inline-formula><mml:math id="M867" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> plus <inline-formula><mml:math id="M868" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">RO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> like in the
<xref ref-type="bibr" rid="bib1.bibx43" id="text.90"/> mechanism or if <inline-formula><mml:math id="M869" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> is produced from enhanced
<inline-formula><mml:math id="M870" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> as suggested by experiments here. The enhanced <inline-formula><mml:math id="M871" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
recycling is demonstrated in this study by the direct quantification of the
<inline-formula><mml:math id="M872" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> radical concentration during the photochemical oxidation of
<inline-formula><mml:math id="M873" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula>. Similar as for isoprene <xref ref-type="bibr" rid="bib1.bibx42 bib1.bibx17" id="paren.91"/> and the
second major organic product from isoprene oxidation, methacrolein,
<xref ref-type="bibr" rid="bib1.bibx6 bib1.bibx18" id="paren.92"/>, <inline-formula><mml:math id="M874" display="inline"><mml:mrow><mml:msub><mml:mrow class="chem"><mml:mi mathvariant="normal">HO</mml:mi></mml:mrow><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> radicals are faster recycled in
the <inline-formula><mml:math id="M875" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> oxidation scheme than previously assumed. For all three
species, <inline-formula><mml:math id="M876" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula> concentrations are found to be a factor of 2 to 3 higher than
calculated by models for atmospheric conditions with low <inline-formula><mml:math id="M877" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">NO</mml:mi></mml:mrow></mml:math></inline-formula>
concentrations. Current state-of-the-art models increased already <inline-formula><mml:math id="M878" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">OH</mml:mi></mml:mrow></mml:math></inline-formula>
production for isoprene and methacrolein oxidation by including additional
reaction pathways. The study here shows that this is also needed for the
<inline-formula><mml:math id="M879" display="inline"><mml:mrow class="chem"><mml:mi mathvariant="normal">MVK</mml:mi></mml:mrow></mml:math></inline-formula> oxidation scheme.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability">

      <p id="d1e11099">Data of the experiments in the SAPHIR chamber used in this
work is available on the EUROCHAMP data homepage
(<uri>https://data.eurochamp.org/</uri>, last access: April 2018).</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e11105">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/acp-18-8001-2018-supplement" xlink:title="pdf">https://doi.org/10.5194/acp-18-8001-2018-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="competinginterests">

      <p id="d1e11114">The authors declare to have no competing interests.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e11120">This project has received funding from the European Research Council (ERC)
under the European Union's Horizon 2020 research and innovation programme
(SARLEP grant agreement No. 681529) and from the European Commission (EC)
under the European Union's Horizon 2020 research and innovation programme
(Eurochamp 2020 grant agreement No. 730997). The authors thank the
Forschungszentrum Jülich for travel support under the project “Seed
Money”. Frank N. Keutsch and Alex Zaytsev were supported by the National
Science Foundation (AGS 1628491 and 1628530). Martin Breitenlechner was
supported by the Austrian Science Fund (FWF), Erwin Schrödinger Stipendium,
Grant No. J-3900. The authors thank Thomas Mentel, Yare Baker and Sungah Kang
from Forschungszentrum Jülich for supporting the <inline-formula><mml:math id="M880" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">HO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> CIMS
measurements.<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>The article processing charges for this open-access <?xmltex \hack{\newline}?>
publication  were covered by a Research <?xmltex \hack{\newline}?> Centre of the Helmholtz Association.<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: Sergey A. Nizkorodov<?xmltex \hack{\newline}?>
Reviewed by: two anonymous referees</p></ack><ref-list>
    <title>References</title>

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    <!--<article-title-html>Investigation of the oxidation of methyl vinyl ketone (MVK) by OH radicals in the atmospheric simulation chamber SAPHIR</article-title-html>
<abstract-html><p>The photooxidation of methyl vinyl ketone (MVK) was investigated in
the atmospheric simulation chamber SAPHIR for conditions at which organic
peroxy radicals (RO<sub>2</sub>) mainly reacted with NO (<q>high
NO</q> case) and for conditions at which other reaction channels could
compete (<q>low NO</q> case). Measurements of trace gas concentrations
were compared to calculated concentration time series applying the Master
Chemical Mechanism (MCM version 3.3.1). Product yields of methylglyoxal and
glycolaldehyde were determined from measurements. For the high NO
case, the methylglyoxal yield was (19&thinsp;±&thinsp;3)&thinsp;% and the glycolaldehyde yield
was (65&thinsp;±&thinsp;14)&thinsp;%, consistent with recent literature studies. For the low
NO case, the methylglyoxal yield reduced to (5&thinsp;±&thinsp;2)&thinsp;% because
other RO<sub>2</sub> reaction channels that do not form methylglyoxal became
important. Consistent with literature data, the glycolaldehyde yield of
(37&thinsp;±&thinsp;9)&thinsp;% determined in the experiment was not reduced as much as
implemented in the MCM, suggesting additional reaction channels producing
glycolaldehyde. At the same time, direct quantification of OH radicals
in the experiments shows the need for an enhanced OH radical
production at low NO conditions similar to previous studies
investigating the oxidation of the parent VOC isoprene and methacrolein, the
second major oxidation product of isoprene. For MVK the
model–measurement discrepancy was up to a factor of 2. Product yields and
OH observations were consistent with assumptions of additional
RO<sub>2</sub> plus HO<sub>2</sub> reaction channels as proposed in literature for
the major RO<sub>2</sub> species formed from the reaction of MVK with
OH. However, this study shows that also HO<sub>2</sub> radical
concentrations are underestimated by the model, suggesting that additional
OH is not directly produced from RO<sub>2</sub> radical reactions, but
indirectly via increased HO<sub>2</sub>. Quantum chemical calculations show that
HO<sub>2</sub> could be produced from a fast 1,4-H shift of the second
most important MVK derived RO<sub>2</sub> species (reaction rate constant
0.003&thinsp;s<sup>−1</sup>). However, additional HO<sub>2</sub> from this reaction
was not sufficiently large to bring modelled HO<sub>2</sub> radical
concentrations into agreement with measurements due to the small yield of
this RO<sub>2</sub> species. An additional reaction channel of the major
RO<sub>2</sub> species with a reaction rate constant of
(0.006&thinsp;±&thinsp;0.004)&thinsp;s<sup>−1</sup> would be required that produces concurrently
HO<sub>2</sub> radicals and glycolaldehyde to achieve model–measurement
agreement. A unimolecular reaction similar to the
1,5-H shift reaction
that was proposed in literature for RO<sub>2</sub> radicals from MVK
would not explain product yields for conditions of experiments in this study.
A set of H-migration reactions for the main RO<sub>2</sub> radicals were
investigated by quantum chemical and theoretical kinetic methodologies, but
did not reveal a contributing route to HO<sub>2</sub> radicals or
glycolaldehyde.</p></abstract-html>
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