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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0">
  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-18-2687-2018</article-id><title-group><article-title>Impact of biomass burning on pollutant surface concentrations in megacities of the Gulf of Guinea</article-title><alt-title>Biomass burning transport toward Gulf of Guinea megacities</alt-title>
      </title-group><?xmltex \runningtitle{Biomass burning transport toward Gulf of Guinea megacities}?><?xmltex \runningauthor{L. Menut et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Menut</surname><given-names>Laurent</given-names></name>
          <email>menut@lmd.polytechnique.fr</email>
        <ext-link>https://orcid.org/0000-0001-9776-0812</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Flamant</surname><given-names>Cyrille</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Turquety</surname><given-names>Solène</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Deroubaix</surname><given-names>Adrien</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-4464-7802</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Chazette</surname><given-names>Patrick</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6230-2982</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Meynadier</surname><given-names>Rémi</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Laboratoire de Météorologie Dynamique, Ecole Polytechnique, IPSL Research University,
Ecole Normale Supérieure, Université Paris-Saclay, Sorbonne Universités, UPMC Univ Paris 06,
CNRS, Route de Saclay, 91128 Palaiseau, France</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>LATMOS/IPSL, Sorbonne Universités, UPMC Univ Paris 06, UVSQ, CNRS, 75252 Paris, France</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>LSCE, Unité mixte CEA-CNRS-UVSQ, UMR 8212, 91191 Gif-sur-Yvette, France</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Laurent Menut (menut@lmd.polytechnique.fr)</corresp></author-notes><pub-date><day>23</day><month>February</month><year>2018</year></pub-date>
      
      <volume>18</volume>
      <issue>4</issue>
      <fpage>2687</fpage><lpage>2707</lpage>
      <history>
        <date date-type="received"><day>11</day><month>September</month><year>2017</year></date>
           <date date-type="rev-request"><day>20</day><month>September</month><year>2017</year></date>
           <date date-type="rev-recd"><day>24</day><month>January</month><year>2018</year></date>
           <date date-type="accepted"><day>28</day><month>January</month><year>2018</year></date>
      </history>
      <permissions>
        
        
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018.html">This article is available from https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018.pdf</self-uri>
      <abstract>
    <p id="d1e139">In the framework of the Dynamics–Aerosol–Chemistry–Cloud Interactions in West
Africa (DACCIWA) project, the tropospheric chemical composition in large
cities along the Gulf of Guinea is studied using the Weather and Research
Forecast and CHIMERE regional models. Simulations are performed for the
May–July 2014 period, without and with biomass burning emissions. Model
results are compared to satellite data and surface measurements. Using
numerical tracer release experiments, it is shown that the biomass burning
emissions in Central Africa are impacting the surface aerosol and gaseous
species concentrations in Gulf of Guinea cities such as Lagos (Nigeria) and
Abidjan (Ivory Coast). Depending on the altitude of the injection of these
emissions, the pollutants follow different pathways: directly along the coast
or over land towards the Sahel before being vertically mixed in the
convective boundary layer and transported to the south-west and over the
cities. In July 2014, the maximum increase in surface concentrations due to
fires in Central Africa is <inline-formula><mml:math id="M1" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 150 <inline-formula><mml:math id="M2" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M3" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for CO,
<inline-formula><mml:math id="M4" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 10 to 20 <inline-formula><mml:math id="M5" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M6" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for O<inline-formula><mml:math id="M7" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and
<inline-formula><mml:math id="M8" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 5 <inline-formula><mml:math id="M9" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M10" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for PM<inline-formula><mml:math id="M11" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula>. The analysis of the
PM<inline-formula><mml:math id="M12" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> chemical composition shows that this increase is mainly related to
an increase in particulate primary and organic matter.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e256">The concentrations of gases and particles are rapidly growing in southern
West Africa (SWA) and driven by the constant increase in anthropogenic
atmospheric emissions. These emissions are linked with car traffic,
industries, and related gas and oil extraction activities, domestic fires, and
waste burning <xref ref-type="bibr" rid="bib1.bibx38" id="paren.1"/>. They are proportional to the population,
which is increasing dramatically in urbanized areas <xref ref-type="bibr" rid="bib1.bibx1" id="paren.2"/>. The
atmospheric pollution problems are mainly present along the coast of the Gulf
of Guinea spanning from Abidjan (Ivory Coast) to Port Harcourt (Nigeria) and
occur in the lower few hundred metres above the surface in the
atmospheric boundary layer (ABL). In addition to this anthropogenic regional
pollution, the region is impacted by other important sources, especially in
the summer, with large emissions of mineral dust from the Sahara and the
Sahel to the north and vegetation fires from Central and southern Africa
<xref ref-type="bibr" rid="bib1.bibx51" id="paren.3"/>. In the coastal region of SWA mineral dust and biomass
burning aerosols are generally observed above the ABL, between 800 and
600 hPa, as the result of long-range transport. Mineral dust is transported
from the north in the Saharan air layer <xref ref-type="bibr" rid="bib1.bibx48" id="paren.4"/>
<xref ref-type="bibr" rid="bib1.bibx16" id="paren.5"/> and can be mixed downward into the ABL over the Sudanian
region <xref ref-type="bibr" rid="bib1.bibx14" id="paren.6"/>. Using a Lagrangian model, <xref ref-type="bibr" rid="bib1.bibx39" id="text.7"/>
show that the intrusion of Southern Hemispheric biomass burning aerosol
plumes occurred in the mid-troposphere over the Gulf of Guinea, but did not
investigate whether these plumes could impact air quality over urbanized
areas of SWA.</p>
      <p id="d1e281">The variability of the atmospheric composition and its impact on West African
climate and on the health of populations and ecosystems is the purpose of
the Dynamics–Aerosol–Chemistry–Cloud Interactions in West Africa (DACCIWA)
project <xref ref-type="bibr" rid="bib1.bibx34" id="paren.8"/>. In this study, we concentrate<?pagebreak page2688?> on the summer of
2014, which was the focus of one of the dry run exercises conducted in
preparation for the field campaign that took place in June–July 2016
<xref ref-type="bibr" rid="bib1.bibx17" id="paren.9"/>. The period corresponds to the onset of the West African
Monsoon (WAM) when the rainy convective systems migrate from the coastal area
along the Gulf of Guinea to the Sahel <xref ref-type="bibr" rid="bib1.bibx63" id="paren.10"/>. The months of
June and July 2014 were more prone to precipitation at the SWA coast than
2015 and 2016 due to a late monsoon onset. The precipitation and the
dynamics associated with the related mesoscale convective systems strongly
impact the vertical distribution of pollutants in the region and can
contribute to improving or degrading air quality.</p>
      <p id="d1e293">The goal of this study is to quantify the relative contribution of the
pollutants associated with biomass burning from Central Africa on the surface
concentrations of aerosols, carbon monoxide (CO), and ozone (O<inline-formula><mml:math id="M13" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>) in
urbanized areas pertaining to the DACCIWA project. In order to take into
account all important sources, a large area is modelled encompassing SWA
(Ivory Coast, Ghana, Togo, Benin, Nigeria) and representing all sites of
interest for the DACCIWA project. We assess the relative contribution of
vegetation biomass burning by investigating the difference between two
simulations: one with and one without biomass burning emissions, from now on
referred to as the FIRE and NoFIRE simulations, respectively. The chemical
composition of the aerosols over coastal SWA is also presented.</p>
      <p id="d1e305">Section <xref ref-type="sec" rid="Ch1.S2"/> presents the observation locations. Section <xref ref-type="sec" rid="Ch1.S3"/>
presents the models and the specific configuration and changes developed for
this study as well as a tracer release experiment. Section <xref ref-type="sec" rid="Ch1.S4"/>
presents an analysis of the long-range transport of gas and aerosol species
and Sect. <xref ref-type="sec" rid="Ch1.S5"/> an analysis of gas and aerosol surface concentrations
in the cities located in the coastal areas. Conclusions are finally presented
in Sect. <xref ref-type="sec" rid="Ch1.S6"/>.</p>
</sec>
<sec id="Ch1.S2">
  <title>Observations</title>
      <p id="d1e324">Data from very different sources were used to conduct this study. They were
obtained from space-borne platforms and ground-based stations. Satellite data
provide information on the horizontal and vertical distributions and
therefore on the long-range transport. Other measurements are available at
specific locations, such as the aerosol optical depth (AOD) and surface
concentrations of particulate matter with a diameter less than
10 <inline-formula><mml:math id="M14" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m (PM<inline-formula><mml:math id="M15" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula>). If the AOD measurements may be relative to any
kind of aerosol source, the PM<inline-formula><mml:math id="M16" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> values are here related to measurements
taken
close to mineral dust sources only and are thus presented in the Appendix. Also note
that for chemistry, there is a lack of in situ surface measurements for
this region and during the studied period.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p id="d1e354">Map of the modelled domain (the red frame). The circles and the
location names indicate the stations described in
Table <xref ref-type="table" rid="Ch1.T1"/>: the red symbols represent the AERONET
stations and the blue symbols represent locations representative of the
most studied sites in the DACCIWA project. The two lines represent the CALIOP
trajectories, with the green one for 26 July 2014 and the yellow one for
27 July 2014. The sub-domains defined for the comparisons between the
model and the IASI data are in blue.</p></caption>
        <?xmltex \igopts{width=298.753937pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f01.png"/>

      </fig>

<?xmltex \hack{\newpage}?>
<sec id="Ch1.S2.SS1">
  <title>The AERONET data</title>
      <p id="d1e372">The modelled aerosol optical properties are compared to observations using
level 2 AERONET (AErosol RObotic NETwork; <xref ref-type="bibr" rid="bib1.bibx26" id="altparen.11"/>) photometer
data, namely (i) AOD at a wavelength of <inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">550</mml:mn></mml:mrow></mml:math></inline-formula> nm and (ii) the
Ångström coefficient calculated using the AOD measured at <inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">470</mml:mn></mml:mrow></mml:math></inline-formula>
and 870 nm. The stations used for the model validation are listed in
Table <xref ref-type="table" rid="Ch1.T1"/> and their location is shown in
Fig. <xref ref-type="fig" rid="Ch1.F1"/>. Note that, except for Lope, most of the AERONET
stations are located in the northern part of the studied region, mainly under
the influence of mineral dust emissions. Comparisons are performed using
statistical scores calculated with an hourly time step and are presented for
a given AERONET station only if data are acquired on a regular basis over a
period of 3 months (i.e. 2280 h) and if more than 30 values can be used
to compute them (only scores for which at least 1.5 % of data are available
are shown).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1"><caption><p id="d1e409">AERONET measurement stations with their names, countries, and
coordinates (sorted by alphabetical order).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">AERONET</oasis:entry>
         <oasis:entry colname="col2">Country</oasis:entry>
         <oasis:entry colname="col3">Longitude</oasis:entry>
         <oasis:entry colname="col4">Latitude</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">station</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">(<inline-formula><mml:math id="M19" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E)</oasis:entry>
         <oasis:entry colname="col4">(<inline-formula><mml:math id="M20" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Ascension</oasis:entry>
         <oasis:entry colname="col2">Saint Helena</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M21" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>14.41</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M22" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>7.98</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Bambey</oasis:entry>
         <oasis:entry colname="col2">Senegal</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M23" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>16.45</oasis:entry>
         <oasis:entry colname="col4">14.70</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Banizoumbou</oasis:entry>
         <oasis:entry colname="col2">Niger</oasis:entry>
         <oasis:entry colname="col3">2.66</oasis:entry>
         <oasis:entry colname="col4">13.54</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cabo Verde</oasis:entry>
         <oasis:entry colname="col2">Cabo Verde</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M24" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>22.94</oasis:entry>
         <oasis:entry colname="col4">16.73</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cinzana</oasis:entry>
         <oasis:entry colname="col2">Mali</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M25" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>5.93</oasis:entry>
         <oasis:entry colname="col4">13.28</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Dakar (M'Bour)</oasis:entry>
         <oasis:entry colname="col2">Senegal</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M26" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>16.96</oasis:entry>
         <oasis:entry colname="col4">14.39</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Ilorin</oasis:entry>
         <oasis:entry colname="col2">Nigeria</oasis:entry>
         <oasis:entry colname="col3">4.34</oasis:entry>
         <oasis:entry colname="col4">8.32</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Izana</oasis:entry>
         <oasis:entry colname="col2">Tenerife</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M27" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>16.50</oasis:entry>
         <oasis:entry colname="col4">28.30</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Lope</oasis:entry>
         <oasis:entry colname="col2">Gabon</oasis:entry>
         <oasis:entry colname="col3">11.93</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M28" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.08</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Zinder</oasis:entry>
         <oasis:entry colname="col2">Niger</oasis:entry>
         <oasis:entry colname="col3">8.98</oasis:entry>
         <oasis:entry colname="col4">13.75</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S2.SS2">
  <title>The satellite data</title>
      <p id="d1e685">Three different satellite datasets are used in this study: (i) the
Moderate Resolution Imaging Spectroradiometer (MODIS) for AOD, (ii) the
Infrared Atmospheric Sounding Interferometer (IASI) for CO, and (iii) the
Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP) for aerosol
classification. The first two correspond to vertically integrated data when
CALIOP provides vertical profiles.</p>
      <p id="d1e688">The MODIS AOD product at 550 nm (from the MODIS–Terra aerosol 5 min L2 swath
10 km data collection 5.2) is used to quantify the increase in aerosol due
to biomass burning <xref ref-type="bibr" rid="bib1.bibx36" id="paren.12"/>. The model outputs and observations are
collocated in space and time in order to exactly compare the model to the
available observations.</p>
      <p id="d1e694">The IASI CO total column retrievals by the FORLI algorithm
<xref ref-type="bibr" rid="bib1.bibx31 bib1.bibx20 bib1.bibx12" id="paren.13"/> are used. CO is a product of
incomplete combustion with a lifetime of several weeks. It can be used here
as a tracer of biomass burning long-range transport. These observations are
thus used to check if biomass burning aerosol plumes in the model are
realistically represented and transported. The comparison between the model
and the IASI observations consists of 3-day-averaged column-integrated CO
concentrations. The model outputs are collocated in space and time with the
satellite observations when they are available. They are also vertically
corrected using the satellite averaging kernels before the vertical
integration. For comparison to the model results, six sub-domains are
defined to represent several regions as follows.
<list list-type="bullet"><list-item>
      <p id="d1e702">SW: the South-West domain is the only region entirely over the sea and may
be under the plume of biomass burning aerosols coming from Central Africa.</p></list-item><list-item>
      <p id="d1e706">SE: the South-East domain represents the region in Central Africa where
vegetation fires are observed.</p></list-item><list-item>
      <p id="d1e710">CW: the Central-West domain is the region containing the Gulf of Guinea
cities studied in this article.</p></list-item><list-item>
      <p id="d1e714">CE: the Central-East domain may be under the plume of vegetation fires
coming from the South-East.</p></list-item><list-item>
      <p id="d1e718">NW and NE: the North-West and North-East domains correspond to regions
without vegetation fire emissions but with mineral dust emissions.</p></list-item></list></p>
      <p id="d1e721">The CALIOP lidar measurements, on-board the Cloud-Aerosol Lidar Pathfinder
Satellite Observation (CALIPSO) satellite <xref ref-type="bibr" rid="bib1.bibx64" id="paren.14"/>, are analysed to
obtain an aerosol sub-type classification (CALIOP v4.10 product), as proposed
in <xref ref-type="bibr" rid="bib1.bibx47" id="text.15"/> and <xref ref-type="bibr" rid="bib1.bibx8" id="text.16"/>. In addition, the product provides
information on the vertical extent of aerosol layers as shown by
<xref ref-type="bibr" rid="bib1.bibx9" id="text.17"/>. The aerosol sub-type classification is built on
thresholds of lidar-derived optical characteristics and is not error free, as
mentioned by <xref ref-type="bibr" rid="bib1.bibx7" id="text.18"/> and <xref ref-type="bibr" rid="bib1.bibx30" id="text.19"/>. Limitations
associated with this aerosol classification are described in
<xref ref-type="bibr" rid="bib1.bibx58" id="text.20"/>. A specific development was carried out for the comparison
between CALIOP and the model results. It is described in detail in
Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>.</p>
</sec>
</sec>
<?pagebreak page2689?><sec id="Ch1.S3">
  <title>Modelling</title>
      <p id="d1e755">For the simulations performed in this study, two regional models are used:
(i) the Weather and Research Forecasting (WRF) model calculates the
meteorological variables, and (ii) the CHIMERE chemistry-transport model
calculates the concentrations of the tracers and the gaseous and aerosols
species. WRF first calculates meteorological fields. Second, CHIMERE uses the
meteorology from WRF and surface emission cadastres to simulate the chemical
concentrations in the atmosphere. WRF and CHIMERE use the same horizontal
domain and the same grid size of 60 km <inline-formula><mml:math id="M29" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 60 km.</p>
      <?pagebreak page2690?><p id="d1e765">The modelled period ranges from 1 May to 31 July 2014. The domain size is
presented in Fig. <xref ref-type="fig" rid="Ch1.F1"/>. The model parameterizations and
characteristics are detailed in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>. A comparison
between the WRF model results and meteorological measurements is presented in
Appendix <xref ref-type="sec" rid="App1.Ch1.S3"/>.</p>
      <p id="d1e774">In this section, we describe the tracer experiment and a dedicated
development in the model pertaining to the vertical profile of biomass
burning emissions.</p>
<sec id="Ch1.S3.SS1">
  <title>The tracer experiment</title>
      <p id="d1e782">The tracer release experiments are aimed at addressing the following question: what
are the regions of Central Africa for which biomass burning aerosols can
reach the coastal cities of the Gulf of Guinea?</p>
      <p id="d1e785">The passive tracers are released from two locations in the western and
eastern part of the biomass burning area in Central Africa for
May–July 2014: trcW in Gabon at 12<inline-formula><mml:math id="M30" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E and <inline-formula><mml:math id="M31" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>5<inline-formula><mml:math id="M32" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, and
trcE in the Democratic Republic of Congo at 25<inline-formula><mml:math id="M33" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E and
<inline-formula><mml:math id="M34" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>5<inline-formula><mml:math id="M35" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N (see Fig. <xref ref-type="fig" rid="Ch1.F1"/>). The corresponding
experiments are named “trcW” and “trcE”. For each location, two vertical
profiles of injection are used: experiments for which aerosols are injected
between the surface and 3000 m a.g.l. are labelled “1” and experiments for
which aerosols are injected from 3000 to 6000 m a.g.l. are tagged “2”.
These two altitude intervals enable the estimation of the sensitivity of the
biomass burning transport to different regimes of the injection height
(<inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) values. The tracers behave as aerosols, with a density and a size
distribution, and are thus subject to deposition during transport. The
tracers are continuously released from 15 June to 30 July. There is no
diurnal cycle, with the emissions flux being constant during the whole period. The
released amount is arbitrary and has no unit (but for realism, the emitted
fluxes are of the same order of magnitude as anthropogenic emissions in SWA).</p>
</sec>
<sec id="Ch1.S3.SS2">
  <?xmltex \opttitle{The vertical profile of biomass burning\hack{\break} aerosol emissions}?><title>The vertical profile of biomass burning<?xmltex \hack{\break}?> aerosol emissions</title>
      <p id="d1e862">The fires in Central Africa generally start in April and peak in July
<xref ref-type="bibr" rid="bib1.bibx13 bib1.bibx3" id="paren.21"/>. A lot of parameters are involved in the
calculation of these emissions, making the wildfire fluxes one of the most
uncertain sources in chemistry-transport models
<xref ref-type="bibr" rid="bib1.bibx23 bib1.bibx59" id="paren.22"/>. This flux calculation may be divided into
three parts: (i) the emissions fluxes, (ii) the injection height <inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and
(iii) the shape of the injection height profile. The first two items have
already been developed in CHIMERE and are now considered as validated
schemes. They are detailed in Appendix <xref ref-type="sec" rid="App1.Ch1.S4"/>.</p>
      <p id="d1e884">For this study, a specific development has been carried out on the shape of
the vertical injection profile. This quantity is difficult to estimate but is
often considered as a very sensitive parameter because the way emitted
particles are vertically distributed in the lower troposphere will likely
impact the long-range transport of biomass burning aerosols.</p>
      <p id="d1e887">A lot of global models simply inject the emitted mass in an
homogeneous way in the boundary layer or from the surface to a prescribed
height <inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> (see references in <xref ref-type="bibr" rid="bib1.bibx55" id="altparen.23"/>, among others).
<xref ref-type="bibr" rid="bib1.bibx56" id="text.24"/> distribute the flux homogeneously between <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. Other models use more complex parameterizations based on thermal
convective approaches primarily developed for boundary layer convection in
dynamical models and adapted to the specific problematic of pyroconvection
<xref ref-type="bibr" rid="bib1.bibx19 bib1.bibx52" id="paren.25"/>. However, this “thermal” approach is
numerically cost consuming and difficult to use, being very sensitive to the
chosen input parameters. Finally, some vertical profiles are close to the
vertical diffusivity profile (<inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi>z</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) shape with the maximum of injection at
the height <inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>, such as in Raffuse et al. (2012) and Veira et al. (2015).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p id="d1e966">Vertical profiles of factors used for the injection of biomass
burning emissions in the troposphere.</p></caption>
          <?xmltex \igopts{width=179.252362pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f02.png"/>

        </fig>

      <p id="d1e975">In this study, and in order to reduce the uncertainty of our results, three
simulations are performed.
<list list-type="bullet"><list-item>
      <p id="d1e980"><italic>NoFIRE</italic>. This simulation takes into account all processes
(dynamic and chemistry) available in the CHIMERE model. All emissions are
taken into account except the biomass burning emissions.</p></list-item><list-item>
      <p id="d1e986"><italic>FIRE PR1 and FIRE PR2</italic>. These simulations have the same
configuration as the NoFIRE simulation except that we add the biomass burning
emissions fluxes. These emissions fluxes are injected in the troposphere
following the two injection height profiles PR1 and PR2, which are described in
Fig. <xref ref-type="fig" rid="Ch1.F2"/>. The difference FIRE–NoFIRE provides a
quantification of the impact of biomass burning on the gas and aerosol
atmospheric concentrations.</p></list-item></list></p>
      <p id="d1e993">The differences between the PR1 and PR2 injection profiles are as follows.
<list list-type="bullet"><list-item>
      <p id="d1e998">PR1: 80 % of emissions are injected in the model layers included in the
interval <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.9</mml:mn><mml:mo>×</mml:mo><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub><mml:mo>&lt;</mml:mo><mml:mi>z</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1.1</mml:mn><mml:mo>×</mml:mo><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The rest, 20 %, are
injected between the surface and <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.9</mml:mn><mml:mo>×</mml:mo><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. This profile was
selected to (i) estimate the long-range transport of biomass burning plumes
and (ii) determine whether fires mainly injected in the mid-troposphere may have an impact
on remote surface concentrations. This profile represents an idealized shape
similar to that generally used for “thermal” parameterization under
convective conditions.</p></list-item><list-item>
      <p id="d1e1047">PR2: the emissions are injected between the surface and <inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The
<inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> value is estimated for each fire. This profile shape is close to the
ones used in <xref ref-type="bibr" rid="bib1.bibx60" id="text.26"/>. This profile has a <inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mi>z</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>-like shape and is
thus expressed as<disp-formula id="Ch1.E1" content-type="numbered"><mml:math id="M48" display="block"><mml:mrow><mml:mfenced close="" open="{"><mml:mtable class="array" columnalign="left left"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">if</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:msub><mml:mi>z</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext>EF</mml:mtext><mml:mo>(</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msub><mml:mi>z</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:msup><mml:mfenced close=")" open="("><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msub><mml:mi>z</mml:mi><mml:mi>n</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="normal">if</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:msub><mml:mi>z</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext>EF</mml:mtext><mml:mo>(</mml:mo><mml:mi>z</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:math></disp-formula>with <inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>/</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.</p></list-item></list></p>
</sec>
<?pagebreak page2691?><sec id="Ch1.S3.SS3">
  <title>Surface tracer concentrations in large cities along the Gulf of Guinea</title>
      <p id="d1e1207">The goal is to estimate whether the biomass burning emissions which occurred in
Central Africa reach the Gulf of Guinea.</p>
      <p id="d1e1210">Results are presented in Fig. <xref ref-type="fig" rid="Ch1.F3"/> for the four emitted
tracers and for the three sites Lope, Lagos, and Abidjan. The four emitted
tracers provide non-zero surface concentrations on the three sites. This means
that the meteorological conditions are favourable to the transport of biomass
burning from Central Africa to the Gulf of Guinea.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p id="d1e1217">Time series of surface concentrations (arbitrary units) in Lope,
Lagos, and Abidjan for the four tracer releases from 15 June to 31 July 2014
and close to the most important biomass burning emission areas observed in
Central Africa.</p></caption>
          <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f03.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><caption><p id="d1e1229">Regional distribution of tracer surface concentrations (arbitrary
units) on 27 July 2014 at 12:00 UTC for each of the tracer experiments,
namely trcW1, trcW2, trcE1, and trcE2.</p></caption>
          <?xmltex \igopts{width=392.648031pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f04.jpg"/>

        </fig>

      <p id="d1e1238">Lope is close to the most important biomass burning observed during the
modelled period. The tracers are first emitted on 15 June and the first
non-zero tracer concentrations in Lope are modelled on 17 June. As expected,
the most important tracer concentrations are modelled for the trcW1
experiment (i.e. trcW experiment with the PR1 injection profile), the site
being very close to the source. The values are important (up to 500 in
arbitrary units). For the same release source but emitted at altitude, the
tracer concentrations from the trcW2 experiment are lower but not negligible.
This shows that even if a tracer is emitted between 3000 and 6000 m a.g.l.,
the daily dry convection in the lower troposphere is strong enough to mix
significant concentrations down to the surface layer. The tracer experiments
further east (i.e. trcE1 and trcE2) also have non-negligible concentrations
in the surface layer in Lope. The first non-zero tracer concentration values
are modelled on 23 June, 8 days after the initial tracer emissions. This
means that even though the emissions are far to the east, the mixing and
long-range transport brings biomass burning aerosols to the west coast of
Central Africa in 1 week.</p>
      <p id="d1e1241">Even if Lagos and Abidjan are far from the tracer sources
(<inline-formula><mml:math id="M50" display="inline"><mml:mo lspace="0mm">≈</mml:mo></mml:math></inline-formula> 1000 km), the biomass burning proxies also exhibit significant
concentrations at the surface in the area of those cities. The most important
concentrations are modelled for the tracer emissions in the western domain.
For this location, the peak values are not completely correlated in time and
depend on the altitude of injection. This shows that the main biomass burning
plume follows the same transport in the troposphere, but also that vertical
mixing coupled with differential advection may change the transport pathways
to the surface layer of the studied cities. Finally, note that in Abidjan,
the highest impact is related to the injection of particles at altitude (i.e.
in the trcW2 experiment) and not to injection in the ABL (i.e. in the trcW1
experiment). The tracer<?pagebreak page2692?> concentrations in Abidjan and Lagos for the trcE1 and
trcE2 experiments are 4 to 5 times lower than for the trcW1 and trcW2
experiments, indicating that most of the tracers are transported away from
the Gulf of Guinea northern coast.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <?xmltex \opttitle{Regional distribution of tracer concentration\hack{\break} at the surface }?><title>Regional distribution of tracer concentration<?xmltex \hack{\break}?> at the surface </title>
      <p id="d1e1260">To increase our understanding of the complex transport pathways of biomass
burning aerosols, we analyse the regional distribution of tracer
concentration at the end of the period covered by the tracer simulations,
during which long-range transport pathways from Central Africa to the Gulf of
Guinea cities are best established.</p>
      <p id="d1e1263">Figure <xref ref-type="fig" rid="Ch1.F4"/> presents surface concentrations for
27 July 2014 at 12:00 UTC and for each of the four tracer experiments. This
day was selected as an example because it corresponds to (i) the end of the
modelled period when the biomass burning transport is the highest, and
(ii) the availability of CALIOP data with biomass burning plumes. As previously
discussed, the tracers in all experiments reach the Gulf of Guinea cities of
Lagos and Abidjan. The most important transport from the fire region to these
cities is associated with the western tracer experiment trcW. For trcW1, the
main transport from the emission region is to the south and the
north-east. Up to latitude <inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>=</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M52" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, the direction of the tracer
transport changes and follows the Harmattan (a dry and dusty north-easterly
wind) towards the west. The most important contribution comes from the tracer
emitted at altitude, i.e. in trcW2. A large part is observed in the southern
part of the emission region, while another contribution follows the coastline
towards the north and Nigeria before veering to the west upon reaching West
Africa and being advected over Lagos and Abidjan.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><caption><p id="d1e1292">Monthly averaged horizontal distribution of AOD (550 nm) for MODIS
and CHIMERE simulations NoFIRE, FIRE PR1, and PR2.</p></caption>
          <?xmltex \igopts{width=392.648031pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f05.pdf"/>

        </fig>

      <p id="d1e1302">For trcW2, the main part of the tracer plume is transported to the east over
the continent. Upon reaching longitudes higher than <inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M54" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, a part of this plume is redirected towards the west as a
result of interactions with the Harmattan. Even though less important than
for trcW1, a non-negligible part of trcW2 tracers is observed in Lagos and
Abidjan.</p>
      <p id="d1e1325">This tracer experiment allows us to better understand the complex transport
pathways of the biomass burning aerosols from Central Africa to the cities of
Lagos and Abidjan. This can be summarized as follows.
<list list-type="bullet"><list-item>
      <p id="d1e1330">Over continental Central Africa, the main transport pathway for biomass
burning aerosols is towards the north-east. For fires, in the western part of
the emissions region, the aerosol plume may follow the coastline.</p></list-item><list-item>
      <p id="d1e1334">The biomass burning products, mainly occurring during the day, are rapidly
mixed in the boundary layer. This boundary layer is very deep and may reach
3000 to<?pagebreak page2693?> 4000 m a.g.l. This means that a few hours after the emissions, a
vertically constant profile is being advected.</p></list-item><list-item>
      <p id="d1e1338">The part of the plume going to the west is already vertically well mixed
when it passes from land to sea. A part is thus transported in the marine
layer and another part above the marine layer in a well stratified layer in the
free troposphere.</p></list-item><list-item>
      <p id="d1e1342">Whatever the emissions location and the injection height, the plume
systematically changes direction upon arriving at latitude
<inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>=</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M56" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N; it is then transported to the south-west, following
the Harmattan flow.</p></list-item></list></p>
      <p id="d1e1367">The main conclusion regarding the tracer experiments is that the whole area
of biomass burning in Central Africa is impacting the surface concentrations
in the Gulf of Guinea coastal cities. The second main conclusion is that
wildfire particle injection profiles PR1 and PR2 (peaking in the lower and
the mid-troposphere, respectively) lead to different biomass burning
transport pathways.
Nevertheless, after a few weeks, the fire emissions injected in the
mid-troposphere have an impact on the Gulf of Guinea cities of the same order
of magnitude as those emitted in the boundary layer.</p>
</sec>
</sec>
<sec id="Ch1.S4">
  <title>Long-range transport of gas and aerosol species</title>
      <p id="d1e1377">Before analysing local pollution, it is necessary to have a synoptic view of
the long-range transport of pollutants. In the previous section, it was shown
that the meteorological conditions are favourable for importing Central
African
pollutants to the Gulf of Guinea coast. In this section, using available
observations and simulations with realistic emissions, transport and
chemistry are used in order to quantify the model ability to retrieve the
variability and intensity of the main pollutants.</p>
<sec id="Ch1.S4.SS1">
  <title>AOD CHIMERE vs. MODIS</title>
      <p id="d1e1385">Results are presented in Fig. <xref ref-type="fig" rid="Ch1.F5"/> for the month of July
2014, when biomass burning intensity is at its maximum for the studied
period. The satellite observations are compared to the three model
configurations NoFIRE, FIRE PR1, and FIRE PR2.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><caption><p id="d1e1392">Comparison of AERONET measurements and model results for
AOD <bold>(a)</bold> and the Ångström exponent <bold>(b)</bold>. Time series are
presented for the Cinzana and Lope stations and for the whole modelled
period.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f06.png"/>

        </fig>

      <p id="d1e1407">Over Africa, the MODIS data show two large areas of AOD <inline-formula><mml:math id="M57" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 0.5: in Central
Africa (corresponding to fire emissions) and up to latitude
10<inline-formula><mml:math id="M58" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N (corresponding to mineral dust emissions). Without fire
emissions, the NoFIRE simulation enables the validation of the mineral dust
modelling and shows that the model tends to underestimate the AOD over the
Sahel between 10 and 15<inline-formula><mml:math id="M59" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N. On the other hand, the plume transported
to the Atlantic is slightly overestimated. Over the Gulf of Guinea, the
modelled AOD is overestimated (0.5 when MODIS shows 0.3). The AOD due to
mineral dust is mostly underestimated and many factors may explain this. As
already discussed in <xref ref-type="bibr" rid="bib1.bibx45" id="text.27"/>, the modelled size distribution may be
inaccurate, while it is very<?pagebreak page2694?> sensitive for the AOD estimation. It was also
shown that a bias in AOD calculation may exist but is not necessarily related
to erroneous modelled surface concentrations of particulate matter (PM). Over
this region and during this period, an additional explanation for this bias
could be related to the way the model handles precipitation events. The
results presented in Appendix C, dedicated to the analysis of the
precipitation, show that the modelled precipitation patterns correspond to
what was observed with the Met Office MIDAS land surface stations. However,
as discussed in <xref ref-type="bibr" rid="bib1.bibx53" id="text.28"/>, <xref ref-type="bibr" rid="bib1.bibx18" id="text.29"/>, and
<xref ref-type="bibr" rid="bib1.bibx15" id="text.30"/>, these processes remain highly variable, uncertain, and
difficult to validate, and it is possible that the scavenging was not modelled
correctly, leading to these differences between the model and observations.</p>
      <p id="d1e1448">When including the calculation of biomass burning emissions and their
transport, a general increase is observed in the FIRE simulations. While AODs
are less than 0.05 in the NoFIRE simulation, AOD values can reach 1 over
Cameroon in the FIRE simulations. The westerly winds transport these biomass
burning plumes over the Gulf of Guinea and the model results shows that the
whole coast is under these dense plumes, from Nigeria to the Ivory Coast. With
MODIS, two high AOD regions related to fires are observed: one in Central
Africa and the other along the coast. With the model, the increase in AOD is
located more to the north and less intense. Finally, it is worth noting that
there are no significant differences between the results of the two FIRE
(using PR1 and PR2) simulations.</p>
      <p id="d1e1452">The conclusion is that the model reproduces the two large areas of high AOD
due to mineral dust and biomass burning emissions, but that the intensities
are not correctly modelled. Over Central Africa, the modelled AODs due to
biomass burning are underestimated. This may be due to fire intensity or
the size distribution of the modelled aerosol. This will be further discussed in
Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/> with the comparison between observed and modelled CO.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <?xmltex \opttitle{AOD and {\AA}ngstr\"{o}m coefficient CHIMERE vs. AERONET}?><title>AOD and Ångström coefficient CHIMERE vs. AERONET</title>

<?xmltex \floatpos{p}?><table-wrap id="Ch1.T2"><caption><p id="d1e1467">Correlations between observations (AERONET) and the model (CHIMERE PR2)
for aerosol optical depth (AOD). <inline-formula><mml:math id="M60" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> is 0 for the NoFIRE simulation and
1 for the simulation with fire emissions. <inline-formula><mml:math id="M61" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> is the percentage of hourly
available measurements, <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mtext>t</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the temporal correlation, and the bias is
calculated by using the difference (model minus observation).</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.97}[.97]?><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Site</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M63" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M64" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">Obs</oasis:entry>
         <oasis:entry colname="col5">Model</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mtext>t</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7">Bias</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Ascension</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">24.3</oasis:entry>
         <oasis:entry colname="col4">0.09</oasis:entry>
         <oasis:entry colname="col5">0.26</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M66" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.08</oasis:entry>
         <oasis:entry colname="col7">0.17</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">24.3</oasis:entry>
         <oasis:entry colname="col4">0.09</oasis:entry>
         <oasis:entry colname="col5">0.27</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M67" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.06</oasis:entry>
         <oasis:entry colname="col7">0.18</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Banizoumbou</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">2.0</oasis:entry>
         <oasis:entry colname="col4">0.30</oasis:entry>
         <oasis:entry colname="col5">0.25</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M68" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.32</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M69" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.06</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">2.0</oasis:entry>
         <oasis:entry colname="col4">0.30</oasis:entry>
         <oasis:entry colname="col5">0.27</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M70" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.46</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M71" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.03</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cabo Verde</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">15.8</oasis:entry>
         <oasis:entry colname="col4">0.43</oasis:entry>
         <oasis:entry colname="col5">0.52</oasis:entry>
         <oasis:entry colname="col6">0.56</oasis:entry>
         <oasis:entry colname="col7">0.09</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">15.8</oasis:entry>
         <oasis:entry colname="col4">0.43</oasis:entry>
         <oasis:entry colname="col5">0.52</oasis:entry>
         <oasis:entry colname="col6">0.56</oasis:entry>
         <oasis:entry colname="col7">0.09</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cinzana</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">30.2</oasis:entry>
         <oasis:entry colname="col4">0.52</oasis:entry>
         <oasis:entry colname="col5">0.43</oasis:entry>
         <oasis:entry colname="col6">0.39</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M72" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.09</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">30.2</oasis:entry>
         <oasis:entry colname="col4">0.52</oasis:entry>
         <oasis:entry colname="col5">0.44</oasis:entry>
         <oasis:entry colname="col6">0.39</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M73" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.08</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Dakar</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">38.7</oasis:entry>
         <oasis:entry colname="col4">0.56</oasis:entry>
         <oasis:entry colname="col5">0.57</oasis:entry>
         <oasis:entry colname="col6">0.69</oasis:entry>
         <oasis:entry colname="col7">0.01</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">38.7</oasis:entry>
         <oasis:entry colname="col4">0.56</oasis:entry>
         <oasis:entry colname="col5">0.58</oasis:entry>
         <oasis:entry colname="col6">0.69</oasis:entry>
         <oasis:entry colname="col7">0.01</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Ilorin</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">8.4</oasis:entry>
         <oasis:entry colname="col4">0.35</oasis:entry>
         <oasis:entry colname="col5">0.44</oasis:entry>
         <oasis:entry colname="col6">0.39</oasis:entry>
         <oasis:entry colname="col7">0.09</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">8.4</oasis:entry>
         <oasis:entry colname="col4">0.35</oasis:entry>
         <oasis:entry colname="col5">0.48</oasis:entry>
         <oasis:entry colname="col6">0.28</oasis:entry>
         <oasis:entry colname="col7">0.13</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Izana</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">51.4</oasis:entry>
         <oasis:entry colname="col4">0.04</oasis:entry>
         <oasis:entry colname="col5">0.19</oasis:entry>
         <oasis:entry colname="col6">0.59</oasis:entry>
         <oasis:entry colname="col7">0.14</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">51.4</oasis:entry>
         <oasis:entry colname="col4">0.04</oasis:entry>
         <oasis:entry colname="col5">0.19</oasis:entry>
         <oasis:entry colname="col6">0.59</oasis:entry>
         <oasis:entry colname="col7">0.15</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Lope</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">2.8</oasis:entry>
         <oasis:entry colname="col4">0.34</oasis:entry>
         <oasis:entry colname="col5">0.15</oasis:entry>
         <oasis:entry colname="col6">0.46</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M74" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.19</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">2.8</oasis:entry>
         <oasis:entry colname="col4">0.34</oasis:entry>
         <oasis:entry colname="col5">0.21</oasis:entry>
         <oasis:entry colname="col6">0.77</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M75" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.13</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Zinder</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">34.7</oasis:entry>
         <oasis:entry colname="col4">0.59</oasis:entry>
         <oasis:entry colname="col5">0.62</oasis:entry>
         <oasis:entry colname="col6">0.42</oasis:entry>
         <oasis:entry colname="col7">0.03</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">34.7</oasis:entry>
         <oasis:entry colname="col4">0.59</oasis:entry>
         <oasis:entry colname="col5">0.63</oasis:entry>
         <oasis:entry colname="col6">0.41</oasis:entry>
         <oasis:entry colname="col7">0.04</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p id="d1e2071">Time series of vertically integrated carbon monoxide (CO column) in
10<inline-formula><mml:math id="M76" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:math></inline-formula> molecules cm<inline-formula><mml:math id="M77" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for IASI and for the simulations with
CHIMERE.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f07.png"/>

        </fig>

      <p id="d1e2101">Results are presented as statistical scores in Table <xref ref-type="table" rid="Ch1.T2"/>.
For the time series, the two FIRE simulations using PR1 and PR2 are
displayed. But for the scores, only the results for FIRE PR2 are presented,
with the differences between the two FIRE simulations being negligible.</p>
      <p id="d1e2107">Except for the station of Lope, differences between the simulations NoFIRE
and FIRE are very small (Table <xref ref-type="table" rid="Ch1.T2"/>). The correlation
values range between <inline-formula><mml:math id="M78" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.08 (Ascension) and 0.77 (Lope). The low score in
Ascension is related to the offshore location of the site and the fact that
long-range transport over the sea is difficult to reproduce: being less
turbulent, there is less horizontal diffusion and vertical mixing. The plumes
are thinner and more concentrated, and the results are more sensitive to a
possible model error in the wind direction. The comparison with observations
located at one single point over the sea thus often exhibits a lower
correlation than for comparisons conducted over land. For other sites, the
correlations are larger and show that the mineral dust variability<?pagebreak page2695?> is well
modelled. The only site with differences between the NoFIRE and FIRE
simulations is Lope, close to the biomass burning areas. The correlation
increases from 0.46 to 0.77 when biomass burning emissions are added. This
shows that the timing of the fire emissions and the transport is
precise enough to clearly improve the simulation.</p>
      <p id="d1e2119">Examples of detailed comparisons between AERONET and the model are displayed
in Fig. <xref ref-type="fig" rid="Ch1.F6"/>. In Cinzana, the AOD hourly variability is well
represented and the majority of observed AOD peaks are modelled. The site
being mainly under the influence of mineral dust emissions, there is no
significant difference between NoFIRE and FIRE. This is very different in
Lope. The addition of the biomass burning emissions increases AOD during the
whole period. The modelled AOD remains lower than the observations, but the
timing and the absolute value are more realistic.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p id="d1e2126">Vertical cross section of CALIOP aerosol types and comparison to the
CHIMERE FIRE simulation. The colour bar is related to the CALIOP
classification: (0 : 1) not applicable, (1 : 2) clean marine, (2 : 3)
dust, (3 : 4) polluted continental or smoke, (4 : 5) clean continental,
(5 : 6) polluted dust, (6 : 7) elevated smoke, and (7 : 8) dusty marine.
For the model, the boundary layer height is superimposed in red.</p></caption>
          <?xmltex \igopts{width=364.195276pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f08.pdf"/>

        </fig>

      <p id="d1e2135">As opposed to the comparison with MODIS, these time series and correlation
values show that the AOD is not always overestimated by the model. This
result shows the large variability obtained with different sets of data and
also reflects the difficulty of modelling this parameter, which is strongly
dependent on the optical properties of the modelled aerosols and the
estimation of the extinction with the modelled size distribution (in our
configuration, 10 bins may be considered as a correctly resolved size
distribution for a CTM).</p>
      <p id="d1e2138">Complementary to the AOD, the Ångström exponent is also compared to the
AERONET retrievals and for the same two stations of Cinzana and Lope. Results
are presented in Fig. <xref ref-type="fig" rid="Ch1.F6"/> (right column). This exponent
expresses the ratio between the AODs at two different wavelengths and its
value is inversely proportional to the aerosol size. Low values of the
Ångström exponent will be representative of mineral dust (aerosols mainly
in the coarse mode), while high values will be representative of biomass
burning. In Cinzana, the Ångström exponent is low, with values between 0
and 0.3 (except some peaks). This means that the aerosol content is mainly
mineral dust. On the other hand, in Lope, the Ångström exponent is higher
and values range between 1 and<?pagebreak page2696?> 1.75, which is representative of finer particles and
thus concentrations related to biomass burning emissions.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <title>CO CHIMERE vs. IASI</title>
      <p id="d1e2149">The CO comparison is presented in Fig. <xref ref-type="fig" rid="Ch1.F7"/> as time
series with the daytime IASI measurements and the corresponding model
results. Each time series corresponds to the sub-domains described in
Fig. <xref ref-type="fig" rid="Ch1.F1"/>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><caption><p id="d1e2158">Time series of surface concentrations (in <inline-formula><mml:math id="M79" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) of
CO, O<inline-formula><mml:math id="M81" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, and PM<inline-formula><mml:math id="M82" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula>. Results are presented for Lagos and Abidjan and
for the simulations NoFIRE and FIRE PR2.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f09.png"/>

        </fig>

      <p id="d1e2204">The IASI data show the increase in vertically integrated CO concentrations
over Central Africa and the eastern Atlantic from May to July (sub-domains
SW and SE): under the influence of biomass burning emissions, the CO
concentrations increase by 100 %, from
<inline-formula><mml:math id="M83" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 1.5 <inline-formula><mml:math id="M84" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M85" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:math></inline-formula> to
<inline-formula><mml:math id="M86" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 3 <inline-formula><mml:math id="M87" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:math></inline-formula> molecules cm<inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>
      <p id="d1e2266">For NoFIRE, the CO concentrations are quasi-constant. For FIRE, the observed
CO increase is correctly reproduced. Even though this increase is slightly
underestimated by the model in the southern part (SW and SE), the temporal
variability and intensity are better modelled in the central part (CW and
CE) where the studied cities are located. North of the studied region (NW
and NE), the biomass burning emissions have a very low impact on the CO
concentrations, with the outputs of NoFIRE and FIRE being close. At this latitude,
the model tends to slightly underestimate CO concentrations (by
<inline-formula><mml:math id="M90" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 0.2 <inline-formula><mml:math id="M91" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:math></inline-formula> molecules cm<inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) with respect to
IASI.</p>
      <p id="d1e2305">The differences between observations and the model may be due to several
factors.
First, the boundary conditions used for the simulations are global and
“climatological” in model outputs. The transition from “mean”
time-averaged values and this real test case may induce biases due to the
lack of temporal variability in the climatologies. For long-lived species
such as CO, these biases may be transported inside the model domain.
Secondly, underestimated CO may be due<?pagebreak page2697?> to overestimated OH or to an
underestimate of the production of CO from the oxidation of VOCs.
<xref ref-type="bibr" rid="bib1.bibx66" id="text.31"/> showed that this last process results in a large variability
in model results. However, without complementary observations it remains
difficult to disentangle different contributions.</p>
</sec>
<sec id="Ch1.S4.SS4">
  <title>CHIMERE vs. CALIOP aerosol sub-types</title>
      <p id="d1e2318">The vertical cross sections of aerosol types derived from CALIOP observations
and CHIMERE simulations along the CALIPSO track for 26 and 27 July 2014 are
displayed in Fig. <xref ref-type="fig" rid="Ch1.F8"/>. We focus on these two days because
(i) CALIOP data are available above the studied region, and (ii) the long-range
transport of biomass burning is at a maximum at the end of the studied period. The
two CALIOP ground tracks are shown in Fig. <xref ref-type="fig" rid="Ch1.F1"/>.</p>
      <p id="d1e2325">The first result with this comparison is that the aerosol characteristics of
the main air masses are well reproduced by the model: over land, the main
aerosol is mineral dust, while over sea, sea-salt aerosols dominate the
composition near the surface. Over sea at altitude, the main aerosol type is
related to biomass burning (denoted as smoke). For the two days, the model is
able to estimate the latitudinal extension of the smoke plume, from <inline-formula><mml:math id="M94" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>15 to
<inline-formula><mml:math id="M95" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>10<inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N. Regarding the vertical extension of smoke, the model
underestimates the altitude of the top of the plume on 26 July but represents
it correctly for 27 July. For this latter day, the vertical structure of the
plume (exhibiting two distinct features) is correctly reproduced by the
model. The main difference between the model and the observations is that the
smoke plume reaches the surface with the model but not in the observations.
<xref ref-type="bibr" rid="bib1.bibx33" id="text.32"/> pointed out that in the case of an optically thick aerosol
layer, the sensitivity of the CALIOP backscattered signal to the altitude of
the base of the aerosol layer is strongly attenuated by the two-way
transmission term. As a result, the operational algorithm may locate the base
of the aerosol layer too high when it could actually be deeper and extend
towards the surface.</p>
      <p id="d1e2354">However, the CALIOP data are only for “elevated smoke” (see
Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>), meaning that this is not because the CALIOP
aerosol typing algorithm did not detect and attribute a smoke value above the
marine layer but rather that there is no smoke. In this sense, the model
provides complementary insight about the plume vertical extent.</p>
      <p id="d1e2359">Finally, this comparison with “instantaneous” measurements in the whole
troposphere proves that the model is able to correctly estimate the location,
latitude, and altitude of the main studied aerosols. This improves our
confidence in the model robustness.</p>
</sec>
</sec>
<sec id="Ch1.S5">
  <title>Impact on the coastal urbanized area pollution</title>
      <p id="d1e2370">In this section, we focus on the atmospheric composition in coastal urbanized
areas. The analysis is carried out with the model only, as no data are available in
the region and for the studied period. Results are presented for the sites
Lagos (Nigeria) and Abidjan (Ivory Coast), which are<?pagebreak page2698?> representative of strongly
urbanized coastal areas in the Gulf of Guinea. The surface concentrations of
three chemical species are presented: (i) O<inline-formula><mml:math id="M97" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, a secondary species
produced by anthropogenic, biogenic, and fire emissions, (ii) CO, a
gaseous species primarily emitted by anthropogenic and fire emissions, and
PM<inline-formula><mml:math id="M98" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula>, which is representative of the sum of aerosol produced by anthropogenic and
natural sources.</p>
      <p id="d1e2391">Time series of surface concentrations of CO, O<inline-formula><mml:math id="M99" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, and PM<inline-formula><mml:math id="M100" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> are
presented in Fig. <xref ref-type="fig" rid="Ch1.F9"/>. The figure shows the concentrations for
NoFIRE and FIRE, as well as the difference (FIRE–NoFIRE). For the three
species and in both cities, the impact of biomass burning appears after a few
days. This impact has the same order of magnitude for the two sites,
highlighting the widespread nature of long-range transport form Central
Africa. The maximum contribution of the biomass burning emissions is
<inline-formula><mml:math id="M101" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 150 <inline-formula><mml:math id="M102" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M103" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for CO,
<inline-formula><mml:math id="M104" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 20 <inline-formula><mml:math id="M105" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M106" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for O<inline-formula><mml:math id="M107" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, and
<inline-formula><mml:math id="M108" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 5 <inline-formula><mml:math id="M109" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M110" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for PM<inline-formula><mml:math id="M111" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula>. The contribution of fires
appears as a smooth but steady increase and does not generate pollution
peaks, which is consistent with continuous wildfire emissions and uninterrupted
long-range transport towards the Gulf of Guinea.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10"><caption><p id="d1e2514">Time series of daily averaged surface concentrations of differences
PM<inline-formula><mml:math id="M112" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula>(FIRE)–PM<inline-formula><mml:math id="M113" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula>(NoFIRE) (in <inline-formula><mml:math id="M114" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M115" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). The speciation
is presented for all aerosol species modelled with CHIMERE.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f10.png"/>

      </fig>

      <p id="d1e2560">The PM<inline-formula><mml:math id="M116" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> is the cumulated mass of several aerosol types. With the model,
it is possible to quantify the contribution of each type of aerosol
<xref ref-type="bibr" rid="bib1.bibx45" id="paren.33"/>. Results are presented for Lagos and Abidjan in
Fig. <xref ref-type="fig" rid="Ch1.F10"/> as differences between the simulations FIRE and
NoFIRE in order to quantify the speciation of the additional amount of
aerosols due to biomass burning.</p>
      <p id="d1e2578"><?xmltex \hack{\newpage}?>The composition of the aerosol related to fires is mainly composed of primary
organic matter (POM) and primary particulate matter (PPM). To a lesser
extent, the aerosol is also composed of ammonium, sulfate, and secondary
organic aerosol (SOA).</p>
</sec>
<sec id="Ch1.S6" sec-type="conclusions">
  <title>Conclusions</title>
      <p id="d1e2588">This study examined the atmospheric composition during the summer of 2014
(from May to July) in the region of the Gulf of Guinea. The main goal was to
quantify the relative contribution of biomass burning emissions occurring in
Central Africa for aerosol (i.e. PM<inline-formula><mml:math id="M117" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula>), CO, and O<inline-formula><mml:math id="M118" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> surface
concentrations in large urbanized areas such as Lagos and Abidjan. It was
conducted in the framework of the DACCIWA European project, aiming to observe
and model the interactions between dynamics, clouds, and aerosols in the Gulf
of Guinea.</p>
      <p id="d1e2609">The period was modelled with the meteorological model WRF and the
chemistry-transport model CHIMERE. Several model configurations were used.
First, in order to know if the biomass burning pollutants reach the Gulf
of Guinea cities (e.g. Lagos and Abidjan), a tracer experiment was performed.
It was shown that, independently of the location of emissions in Central
Africa, biomass burning always impacts the surface concentrations of
pollutants in those cities. Depending on the location of the emissions, the
fire plumes may follow the west coast of Central Africa to reach the cities
(the most direct transport pathway) or may be advected towards the east over
continental Africa and reoriented toward the cities by the north-easterly
Harmattan winds. In order to gain insight into the impact of biomass burning
emissions injection in the atmosphere, two simulations were performed with
different vertical injection profiles, one peaking in the lower troposphere
and one peaking in the mid-troposphere. It was shown that resulting tracer
surface concentrations were not sensitive to the shape of the profile. The
reason is that, during a fire, the pyroconvection induces a strong and fast
mixing of the surface flux. Whatever the shape of the injection profile, the
pollutants are quickly mixed in the vertical before being transported over
long distances.</p>
      <p id="d1e2612">The simulations with realistic biomass burning emissions were analysed by
comparison to numerous datasets: CO from IASI, AOD from MODIS and AERONET,
surface concentrations of PM<inline-formula><mml:math id="M119" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> from the Sahelian Dust Transect data, and
aerosol sub-type classification from CALIOP. It was shown that the model is
able to reproduce the physical and chemical characteristics of the emitted
gas and aerosol species due to biomass burning. In addition, and using the
vertical information provided by CALIOP, it was shown that the location and
altitude of the several aerosol plumes (mineral dust and biomass burning) are
correctly modelled.</p>
      <p id="d1e2624">Finally, and by a comparison of simulations without fire emissions (NoFIRE) and
simulations with fire emissions<?pagebreak page2699?> (FIRE), a first quantification of the amount
of additional pollutants in Lagos and Abidjan was presented. It was shown
that biomass burning will induce a regular increase in surface concentrations
of pollutants during the whole studied period with the order of magnitude of
<inline-formula><mml:math id="M120" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 150 <inline-formula><mml:math id="M121" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M122" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for CO,
<inline-formula><mml:math id="M123" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 20 <inline-formula><mml:math id="M124" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M125" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for O<inline-formula><mml:math id="M126" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, and
<inline-formula><mml:math id="M127" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 5 <inline-formula><mml:math id="M128" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M129" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for PM<inline-formula><mml:math id="M130" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula>. Using the modelled
speciation, this additional amount was shown to be mainly composed of POM and
PPM.</p>
      <p id="d1e2725">This study shows that an understanding of atmospheric pollution for
urbanized areas in the Gulf of Guinea region must take into account biomass
burning in Central Africa. The numerous chemical species contained in the
fires plumes are involved in the budget of air quality and their
concentrations will directly affect human health <xref ref-type="bibr" rid="bib1.bibx34" id="paren.34"/>.<?xmltex \hack{\vadjust{\newpage}}?>
In this study, the model configuration was off-line and this may induce a
bias in the result: the direct effect of dense biomass burning plumes may
directly affect the convection in the region and the large amount of aerosols
may also change the precipitation via indirect aerosol effect. The next
step will be to study this interaction using an online coupled modelling
system.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability">

      <p id="d1e2737">All simulations presented in this article are available on request to the first author.</p>
  </notes><?xmltex \hack{\clearpage}?><app-group>

<?pagebreak page2700?><app id="App1.Ch1.S1">
  <title>The model set-up</title>
<sec id="App1.Ch1.S1.SS1">
  <title>The WRF meteorological model</title>
      <p id="d1e2754">The meteorological variables are modelled with the non-hydrostatic WRF
regional model in its version 3.6.1 <xref ref-type="bibr" rid="bib1.bibx54" id="paren.35"/>. The global
meteorological analyses from the National Centers for Environmental
Prediction (NCEP) with the Global Forecast System (GFS) products are used to
nudge WRF hourly for pressure, temperature, humidity, and wind. In order to
preserve both large-scale circulations and small-scale gradients and
variability, the “spectral nudging” technique was applied. This nudging was
evaluated in regional models, as presented in <xref ref-type="bibr" rid="bib1.bibx61" id="text.36"/>. In this
study, the spectral nudging was selected to be applied for all wavelengths
greater than <inline-formula><mml:math id="M131" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 2000 km (wave numbers less than 3 in latitude and
longitude for wind, temperature, and humidity and only above 850 hPa). This
configuration allows the regional model to create its own dynamics,
thermodynamics, and composition features within the boundary layer and ensures
that the large scale follows the thermodynamic fields from the analyses.</p>
      <p id="d1e2770">The model is used with 28 vertical levels from the surface to 50 hPa. The
Single Moment 5-class microphysics scheme is used, allowing for mixed phase
processes and supercooled water <xref ref-type="bibr" rid="bib1.bibx27" id="paren.37"/>. The radiation scheme is
the RRTMG scheme with the MCICA method of random cloud overlap
<xref ref-type="bibr" rid="bib1.bibx46" id="paren.38"/>. The surface layer scheme is based on Monin–Obukhov with
a
Carlson–Boland viscous sub-layer. The surface physics is calculated using the
Noah Land Surface Model scheme with four soil temperature and moisture
layers <xref ref-type="bibr" rid="bib1.bibx10" id="paren.39"/>. The planetary boundary layer physics is processed
using the Yonsei University scheme <xref ref-type="bibr" rid="bib1.bibx28" id="paren.40"/>, and the cumulus
parameterization uses the ensemble scheme of <xref ref-type="bibr" rid="bib1.bibx24" id="text.41"/>. The aerosol
direct effect is taken into account using the <xref ref-type="bibr" rid="bib1.bibx57" id="text.42"/> climatology.</p>
</sec>
<sec id="App1.Ch1.S1.SS2">
  <title>The CHIMERE chemistry-transport model</title>
      <p id="d1e2798">CHIMERE is a chemistry-transport model allowing for the simulation of
concentration fields of gaseous and aerosol species on a regional scale. It
is an off-line model driven by precalculated meteorological fields. In this
study, the version fully described in <xref ref-type="bibr" rid="bib1.bibx43" id="text.43"/> and updated in
<xref ref-type="bibr" rid="bib1.bibx37" id="text.44"/> is used. If the simulation is performed with the same
horizontal domain, the 28 vertical levels of the WRF simulations are
projected onto 20 levels from the surface up to 200 hPa for CHIMERE. The
CHIMERE vertical levels increase in depth from the surface to the top. The
altitudes (above ground level) of the first four vertical layers are
<inline-formula><mml:math id="M132" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 18, 42, 75, and 115 m, respectively. Being expressed in
<inline-formula><mml:math id="M133" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula> pressure coordinates, the layer depths are not constant in space and
time and are able to follow the surface pressure evolution and the
topography.</p>
      <p id="d1e2821">The chemical evolution of gaseous species is calculated using the MELCHIOR2
scheme. The photolysis rates are explicitly calculated using the FastJX
radiation module (version 7.0b) <xref ref-type="bibr" rid="bib1.bibx62 bib1.bibx6" id="paren.45"/>. The aerosols are
modelled using the scheme developed by <xref ref-type="bibr" rid="bib1.bibx5" id="text.46"/>. The aerosol
size is represented using 10 bins from 40 nm to 40 <inline-formula><mml:math id="M134" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m in mean
mass median diameter (MMMD). The aerosol life cycle is completely represented
with the nucleation of sulfuric acid, coagulation, absorption, wet and dry
deposition, and scavenging. The scavenging is represented by in-cloud and
sub-cloud scavenging.</p>
      <p id="d1e2837">The aerosol model species and their characteristics consist of 10 different
types of aerosols, some being a compound of several aerosol species. In the
Results section, these species are represented as follows: PPM is for anthropogenic
primary particulate matter, DUST is for mineral dust, EC is for elemental
carbon, POM is for primary organic matter, SALT is for sea salts, and SOA is for
secondary organic aerosols. SO<inline-formula><mml:math id="M135" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, NO<inline-formula><mml:math id="M136" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, and NH<inline-formula><mml:math id="M137" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> are equivalents of
sulfate, nitrate, and ammonium, respectively. WATER is for water. More details
are provided in <xref ref-type="bibr" rid="bib1.bibx43 bib1.bibx45" id="text.47"/>.</p>
      <p id="d1e2870">The modelled AOD is calculated by FastJX for several wavelengths over the
whole atmospheric column, as detailed in <xref ref-type="bibr" rid="bib1.bibx45" id="text.48"/>. At the boundaries
of the domain, climatologies from global model simulations are used. In this
study, outputs from LMDz-INCA <xref ref-type="bibr" rid="bib1.bibx25" id="paren.49"/> are used for all
gaseous and aerosols species, except for mineral dust for which the simulations
from the GOCART model are used <xref ref-type="bibr" rid="bib1.bibx22" id="paren.50"/>.</p>
      <p id="d1e2883">The anthropogenic emissions are issued from the Hemispheric Transport of
Air Pollution (HTAP) global database <xref ref-type="bibr" rid="bib1.bibx32" id="paren.51"/>. These emissions
are provided as gridded maps for each month of the year. For the simulation,
weekly profiles are applied to include weekdays, Saturdays, and Sundays. In
addition, hourly profiles are applied to have an hourly variability also
depending on the activity sector. The complete calculation of these fluxes is
detailed in <xref ref-type="bibr" rid="bib1.bibx42" id="text.52"/> and <xref ref-type="bibr" rid="bib1.bibx37" id="text.53"/>.</p>
      <p id="d1e2895">The mineral dust emissions are calculated using the <xref ref-type="bibr" rid="bib1.bibx2" id="text.54"/>
scheme, optimized following <xref ref-type="bibr" rid="bib1.bibx41" id="text.55"/>, and use the soil and surface
databases presented in <xref ref-type="bibr" rid="bib1.bibx44" id="text.56"/>. Since this latter article, several
changes have been made in the emissions scheme. They are all related to the
spatial extent of the emissions flux calculations: from the Sahara only to
any arid or semi-arid areas in the world. The surface and soil databases
being global, the fluxes are now systematically calculated over the whole
domain, including non-desert areas such as Europe. In order to keep
realistic fluxes under a variety of meteorological conditions, the emissions
scheme was adapted. These changes are active for all model cells including
the desert ones. These changes are briefly described below.</p>
      <?pagebreak page2701?><p id="d1e2907">The erodibility is diagnosed using the United States Geological Survey (USGS)
land use and an additional database, which was built using MODIS surface reflectance
<xref ref-type="bibr" rid="bib1.bibx4" id="paren.57"/>. For all model cells considered as “desert”, the MODIS
erodibility is used, while for all other cells, a constant erodibility factor
is applied depending on the USGS land use, as in <xref ref-type="bibr" rid="bib1.bibx44" id="text.58"/>. To take
into account the rain effect on mineral dust emissions limitation, a
“memory” function is added. During a precipitation event, the surface
emissions fluxes are set to zero. After the precipitation event, a smooth
function is applied to account for a possible crust at the surface and thus
fewer emissions <xref ref-type="bibr" rid="bib1.bibx37" id="paren.59"/>.</p>
</sec>
</app>

<app id="App1.Ch1.S2">
  <title>Development of the model to CALIOP aerosol sub-type calculation</title>
      <p id="d1e2926">The equivalent of the CALIOP aerosol classification is obtained from CHIMERE
using aerosol concentrations directly. The depolarization not being modelled,
we have to find other ways to reproduce the CALIOP classification. The
following assumptions are made.
<list list-type="bullet"><list-item>
      <p id="d1e2931">The CALIOP terminology “elevated smoke” is difficult to evaluate in
terms of altitude. In <xref ref-type="bibr" rid="bib1.bibx47" id="text.60"/>, it is stated that thin aerosol layers
are “clean continental” close to the surface or “smoke” if they
are elevated. Over the ocean, all elevated non-dust aerosol layers are
identified as smoke.</p></list-item><list-item>
      <p id="d1e2938">CALIOP is particularly sensitive to clouds and <xref ref-type="bibr" rid="bib1.bibx11" id="text.61"/> noted
that CALIOP often misidentifies aerosol as clouds. In <xref ref-type="bibr" rid="bib1.bibx65" id="text.62"/>,
“elevated layers” are considered as those up to 2 km above ground level.</p></list-item><list-item>
      <p id="d1e2948">In this study, we make no difference between “dust” and “dusty marine”:
this is mineral dust.</p></list-item><list-item>
      <p id="d1e2952">Many CALIOP profiles contain “not applicable” values. This means that
the detection algorithm was not able to affect an aerosol type. This is not
the case with the model, in which for each profile and each altitude, we are
able to diagnose the major aerosol contribution, thereby increasing the
information content with respect to CALIOP products.</p></list-item></list></p>
      <p id="d1e2955">The other hypotheses made to match as best as possible the CALIOP “optical
indexes” with CHIMERE “aerosol concentrations” are described in
Table <xref ref-type="table" rid="App1.Ch1.T1"/>. The model species are, in general, directly
linked to the CALIOP classification. As the model is able to separate PM from
anthropogenic and biogenic origin <xref ref-type="bibr" rid="bib1.bibx43" id="paren.63"/>, we use it to
distinguish the “polluted continental” and “clean continental” aerosol
layers. For the biomass burning emissions products, the “smoke” is
considered as the sum of elemental carbon (EC) and POM.</p>

<?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.T1"><caption><p id="d1e2966">Correspondence between CALIOP “optical indexes” and CHIMERE
“aerosol concentrations”.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Code</oasis:entry>
         <oasis:entry colname="col2">CALIOP</oasis:entry>
         <oasis:entry colname="col3">CHIMERE</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">0</oasis:entry>
         <oasis:entry colname="col2">Not applicable</oasis:entry>
         <oasis:entry colname="col3">Not used</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">1</oasis:entry>
         <oasis:entry colname="col2">Clean marine</oasis:entry>
         <oasis:entry colname="col3">SALT</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2</oasis:entry>
         <oasis:entry colname="col2">Dust</oasis:entry>
         <oasis:entry colname="col3">DUST</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3</oasis:entry>
         <oasis:entry colname="col2">Pol. cont. or smoke</oasis:entry>
         <oasis:entry colname="col3">PM10ant <inline-formula><mml:math id="M138" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> (EC <inline-formula><mml:math id="M139" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> POM)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">4</oasis:entry>
         <oasis:entry colname="col2">Clean cont.</oasis:entry>
         <oasis:entry colname="col3">PM10bio <inline-formula><mml:math id="M140" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula> SALT</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">5</oasis:entry>
         <oasis:entry colname="col2">Pol. dust</oasis:entry>
         <oasis:entry colname="col3">PPM</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">6</oasis:entry>
         <oasis:entry colname="col2">Elevated smoke</oasis:entry>
         <oasis:entry colname="col3">EC <inline-formula><mml:math id="M141" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> POM</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">7</oasis:entry>
         <oasis:entry colname="col2">Dusty marine</oasis:entry>
         <oasis:entry colname="col3">DUST</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</app>

<app id="App1.Ch1.S3">
  <title>Synoptic meteorological situation</title>
      <p id="d1e3129">The studied period corresponds to a specific and complex meteorology. In this
section, we focus on precipitation near the coastline where various
precipitating systems occurred during the period from May to August;
Fig. <xref ref-type="fig" rid="App1.Ch1.F1"/>. This constrains the transport of local emissions
and impacts the wet deposition of emitted species.</p>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.F1"><caption><p id="d1e3136">Comparison between observed and modelled daily cumulated
precipitation rate (mm day<inline-formula><mml:math id="M142" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) for 15 May and 15 July 2014. For the precipitation
measurements, only the non-zero daily cumulated values are reported on the
plot.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f11.jpg"/>

      </fig>

      <?pagebreak page2702?><p id="d1e3157">Time series of comparisons are presented in Fig. <xref ref-type="fig" rid="App1.Ch1.F2"/> for the
highly urbanized coastal cities of Lagos and Abidjan. The observations are
from the Met Office MIDAS land surface stations data
(<uri>http://data.ceda.ac.uk/badc/ukmo-midas/</uri>). They are provided with a
3-hourly time step and are daily accumulated. In Lagos, the observed
precipitation rate is sporadic but intense, with values up to
60 mm day<inline-formula><mml:math id="M143" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> five times during the period. For May and June, the model
simulates lower values for these events. During July, the model simulates the
two largest precipitation events on 2 and 18 July, but with a time shift of 1
to 2 days, respectively. Furthermore, the model produces rain every day,
unlike what is observed, thereby overestimating the number of rainy days.
This will likely lead to an underestimation of the modelled surface
concentrations due to the enhanced simulated wet scavenging in the lower
troposphere. In Abidjan, the observed precipitation rate is more important
and frequent. The simulation is more realistic and there is a better
agreement between the number of rainy days and the 24 h accumulated
precipitation. The two rainiest periods, around 15 June and 1 July, are well
simulated, with rainfall amounts in excess of 50 mm day<inline-formula><mml:math id="M144" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.F2"><caption><p id="d1e3192">Time series of 24 h accumulated precipitation from the BADC
stations and the corresponding model cell: Lagos <bold>(a)</bold> and
Abidjan <bold>(b)</bold>.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f12.png"/>

      </fig>

<?xmltex \hack{\newpage}?>
</app>

<app id="App1.Ch1.S4">
  <title>The biomass burning emissions calculations</title>
      <p id="d1e3215">The biomass burning emissions fluxes are a forcing delicate to model. Several
steps are needed to estimate these fluxes, from the flux at the surface
itself, to the way to inject it in the atmosphere. We can split the
calculation into three different steps.</p>
      <p id="d1e3218"><list list-type="order">
          <list-item>

      <p id="d1e3223">The emissions fluxes: this is the emitted mass for each chemical species.</p>
          </list-item>
          <list-item>

      <p id="d1e3229">The injection height: this parameter defines the top altitude of the fire
emission vertical plume.</p>
          </list-item>
          <list-item>

      <p id="d1e3235">The injection vertical profile: having the total emitted mass flux and
the top of the plume, it is necessary to define the shape of the vertical
injection profile.</p>
          </list-item>
        </list></p>
      <p id="d1e3240">The <italic>emissions fluxes</italic> depend on the burned area, land use, vegetation
type, and fuel load. The calculations are performed hourly using the
high-spatial-resolution Analysis and Prediction of the Impact of Fires on Air
Quality Modeling (APIFLAME) model. All information about this estimation is
provided in <xref ref-type="bibr" rid="bib1.bibx59" id="text.64"/>. This model was previously used, for
example, in <xref ref-type="bibr" rid="bib1.bibx50" id="text.65"/>. In this APIFLAME model version, fire emissions
fluxes are calculated based on the MODIS burned area product MCD64
<xref ref-type="bibr" rid="bib1.bibx21" id="paren.66"/>. The emission fluxes being estimated daily, a diurnal
profile is applied in which 30 % is redistributed during the night (18:00 to
08:00 LT local time) and 70 % during the day, close to values usually
chosen in biomass burning model studies <xref ref-type="bibr" rid="bib1.bibx67" id="paren.67"/>. More than 40
chemical species are calculated and then used in the CHIMERE model. An
example of the time-cumulated flux of CO for the month of July 2014 is
presented in Fig. <xref ref-type="fig" rid="App1.Ch1.F3"/>. Emissions related to biomass burning
are mainly located in Central Africa.</p>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.F3"><caption><p id="d1e3263">Biomass burning emission fluxes of CO (in
molecules cm<inline-formula><mml:math id="M145" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> month<inline-formula><mml:math id="M146" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) cumulated over the whole month of July 2014.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f13.png"/>

      </fig>

      <?pagebreak page2703?><p id="d1e3297">For <italic>the injection height</italic>, <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, we used the approach proposed by
<xref ref-type="bibr" rid="bib1.bibx55" id="text.68"/>. In south-western Africa and during the months of July and
August, a typical variability in <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is estimated between 3 and 4.5 km
<xref ref-type="bibr" rid="bib1.bibx35" id="paren.69"/>. The calculation of <xref ref-type="bibr" rid="bib1.bibx55" id="text.70"/> is based on the
convective available potential energy estimation, itself diagnosed using the
fire radiative power (FRP) of each fire. They validated their <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
calculation using the Multi-angle Imaging SpectroRadiometer plume height
retrievals and showed a good agreement between the two. <inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is estimated
for each individual fire as
          <disp-formula id="App1.Ch1.E1" content-type="numbered"><mml:math id="M151" display="block"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:msub><mml:mi>H</mml:mi><mml:mtext>abl</mml:mtext></mml:msub><mml:mo>+</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>f</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mrow><mml:mi>f</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="italic">γ</mml:mi></mml:msup><mml:mi>exp⁡</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:msubsup><mml:mi>N</mml:mi><mml:mtext>FT</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mrow><mml:msubsup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        with <inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.24</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:mi mathvariant="italic">β</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">170</mml:mn></mml:mrow></mml:math></inline-formula> m, <inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:mi mathvariant="italic">γ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.35</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mrow><mml:mi>f</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> W, and <inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:msubsup><mml:mi>N</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2.4</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> s<inline-formula><mml:math id="M158" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The FRP,
<inline-formula><mml:math id="M159" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>f</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, is expressed in W (with 1 W <inline-formula><mml:math id="M160" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 1 J s<inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> m<inline-formula><mml:math id="M162" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> kg s<inline-formula><mml:math id="M163" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). <inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>FT</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the Brünt–Väisälä frequency in
the free troposphere.</p>
      <p id="d1e3607">An empirical correction is performed for the known underestimation of FRP by
MODIS in the case of strong fires <xref ref-type="bibr" rid="bib1.bibx60" id="paren.71"/>:
          <disp-formula id="App1.Ch1.E2" content-type="numbered"><mml:math id="M165" display="block"><mml:mrow><mml:msubsup><mml:mi>P</mml:mi><mml:mi>f</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>=</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi>f</mml:mi></mml:msub><mml:mo>×</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mi>p</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mtext>deep</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mi mathvariant="italic">ϵ</mml:mi></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        with <inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:msub><mml:mi>H</mml:mi><mml:mtext>deep</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1500</mml:mn></mml:mrow></mml:math></inline-formula> m.</p>
      <p id="d1e3682">The last step, <italic>the injection vertical profile shape</italic>, corresponds to
a development specifically carried out for this study.</p>
<sec id="App1.Ch1.S4.SS1">
  <?xmltex \opttitle{PM${}_{{10}}$ CHIMERE vs. surface measurements}?><title>PM<inline-formula><mml:math id="M168" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> CHIMERE vs. surface measurements</title>
      <p id="d1e3703">The surface PM<inline-formula><mml:math id="M169" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> concentrations of the Sahelian Dust Transect
<xref ref-type="bibr" rid="bib1.bibx40" id="paren.72"/> are used to ensure that the aerosol mass is well
modelled close to the surface. It is a network of four stations: Banizoumbou
(Niger), Cinzana (Mali), M'Bour, and Bambey (Senegal). These stations are
collocated with the AERONET stations. The main goal of this network is to
have measurements along an iso-latitude transect at
<inline-formula><mml:math id="M170" display="inline"><mml:mo>≈</mml:mo></mml:math></inline-formula> 13<inline-formula><mml:math id="M171" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N. In the framework of observations and modelling studies,
these measurements were already used in <xref ref-type="bibr" rid="bib1.bibx29" id="text.73"/>, for example.</p>
      <p id="d1e3737">Statistical scores are presented in Table <xref ref-type="table" rid="App1.Ch1.T2"/> for the
PR2 configuration only. Results show that the addition of fire emissions has
a very low impact on these surface concentrations. This is mainly due to the
fact that the only sites having PM<inline-formula><mml:math id="M172" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> surface concentration measurements
are located in the northern part of the domain and are not under the effect
of biomass burning emissions; they are mostly under mineral dust emissions and
transported plumes. This confirms that the fires plumes do not reach this
latitude of 13<inline-formula><mml:math id="M173" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N.</p>
      <p id="d1e3760"><?xmltex \hack{\newpage}?>Time series for the site of Cinzana are shown in Fig. <xref ref-type="fig" rid="App1.Ch1.F4"/>.
Results also show that the PM<inline-formula><mml:math id="M174" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> concentrations have a large temporal
variability, both in measurements and the model. However, even though the
correlations are low, it is shown that the model is able to estimate the
amount of mineral dust.</p>

<?xmltex \floatpos{h}?><table-wrap id="App1.Ch1.T2"><caption><p id="d1e3779">Correlations between observations (Sahelian Transect) and the model
(CHIMERE PR2) for the PM<inline-formula><mml:math id="M175" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> surface concentrations. <inline-formula><mml:math id="M176" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> is 0 for the
NoFIRE simulation and 1 for the simulation with fire emissions. <inline-formula><mml:math id="M177" display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> is the
percentage of hourly available measurements, <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mtext>t</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the temporal
correlation, and the bias is calculated
by using the difference between the observation and the model.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.95}[.95]?><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
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         <oasis:entry colname="col5">Model</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:msub><mml:mi>R</mml:mi><mml:mtext>t</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7">Bias</oasis:entry>
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     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Bambey</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">99.9</oasis:entry>
         <oasis:entry colname="col4">74.56</oasis:entry>
         <oasis:entry colname="col5">73.86</oasis:entry>
         <oasis:entry colname="col6">0.29</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M182" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.70</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">99.9</oasis:entry>
         <oasis:entry colname="col4">74.56</oasis:entry>
         <oasis:entry colname="col5">73.98</oasis:entry>
         <oasis:entry colname="col6">0.29</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M183" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.57</oasis:entry>
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       <oasis:row>
         <oasis:entry colname="col1">Banizoumbou</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">98.8</oasis:entry>
         <oasis:entry colname="col4">194.70</oasis:entry>
         <oasis:entry colname="col5">60.58</oasis:entry>
         <oasis:entry colname="col6">0.13</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M184" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>134.12</oasis:entry>
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       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">98.8</oasis:entry>
         <oasis:entry colname="col4">194.70</oasis:entry>
         <oasis:entry colname="col5">61.55</oasis:entry>
         <oasis:entry colname="col6">0.13</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M185" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>133.16</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Dakar</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">99.8</oasis:entry>
         <oasis:entry colname="col4">71.11</oasis:entry>
         <oasis:entry colname="col5">84.89</oasis:entry>
         <oasis:entry colname="col6">0.19</oasis:entry>
         <oasis:entry colname="col7">13.78</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">99.8</oasis:entry>
         <oasis:entry colname="col4">71.11</oasis:entry>
         <oasis:entry colname="col5">85.01</oasis:entry>
         <oasis:entry colname="col6">0.19</oasis:entry>
         <oasis:entry colname="col7">13.90</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Cinzana</oasis:entry>
         <oasis:entry colname="col2">0</oasis:entry>
         <oasis:entry colname="col3">99.0</oasis:entry>
         <oasis:entry colname="col4">95.60</oasis:entry>
         <oasis:entry colname="col5">63.89</oasis:entry>
         <oasis:entry colname="col6">0.25</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M186" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>31.72</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">1</oasis:entry>
         <oasis:entry colname="col3">99.0</oasis:entry>
         <oasis:entry colname="col4">95.60</oasis:entry>
         <oasis:entry colname="col5">64.67</oasis:entry>
         <oasis:entry colname="col6">0.25</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M187" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>30.93</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <?xmltex \floatpos{h}?><fig id="App1.Ch1.F4"><caption><p id="d1e4121">PM<inline-formula><mml:math id="M188" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">10</mml:mn></mml:msub></mml:math></inline-formula> surface concentration time series measured with the
Sahelian Transect Network and modelled with the NoFIRE and the FIRE PR1 and
PR2 configurations.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/2687/2018/acp-18-2687-2018-f14.png"/>

        </fig>

<?xmltex \hack{\clearpage}?>
</sec>
</app>
  </app-group><notes notes-type="competinginterests">

      <p id="d1e4146">The authors declare that they have no conflict of
interest.</p>
  </notes><notes notes-type="sistatement">

      <p id="d1e4152">This article is part of the special issue “Results of the
project “Dynamics–aerosol–chemistry–cloud interactions in West Africa”
(DACCIWA) (ACP/AMT inter-journal SI)”. It is not associated with a
conference.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e4158">The research leading to these results received funding from the European
Union 7th Framework Programme (FP7/2007-2013) under grant agreement
no. 603502 (EU project DACCIWA: Dynamics–Aerosol–Chemistry–Cloud interactions
in West Africa). Thanks to the British Atmospheric Data Centre, which is part
of the NERC National Centre for Atmospheric Science (NCAS), for the
meteorological surface data used in this paper. Solène Turquety
acknowledges the French space agency (CNES) for financial support. The IASI
CO data were provided by LATMOS/CNRS and ULB. The MODIS AOD datasets were
acquired from the Level-1 and Atmosphere Archive and Distribution System
(LAADS) Distributed Active Archive Center (DAAC), located in the Goddard
Space Flight Center in Greenbelt, Maryland
(<uri>https://ladsweb.nascom.nasa.gov/</uri>). We thank Bernadette Chatenet, the
technical PI of the Sahelian stations from 2006 to 2012,
Béatrice Marticorena and Jean-Louis Rajot, the scientific co-PIs, and the
African technicians who manage the stations. We thank the principal
investigators and their staff for establishing and maintaining the AERONET
sites used in this study. The CALIOP level 4.10 data, available at
<uri>https://eosweb.larc.nasa.gov/</uri>, were obtained from the NASA Langley
Research Center Atmospheric Science Data Center, which is gratefully
acknowledged. Finally, the authors would like to thank Mark Parrington and an
anonymous referee for their comments that helped improve the content and
presentation of the study. <?xmltex \hack{\newline}?><?xmltex \hack{\newline}?> Edited by: Mathew
Evans<?xmltex \hack{\newline}?> Reviewed by: Mark Parrington and one anonymous referee</p></ack><ref-list>
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<abstract-html><p>In the framework of the Dynamics–Aerosol–Chemistry–Cloud Interactions in West
Africa (DACCIWA) project, the tropospheric chemical composition in large
cities along the Gulf of Guinea is studied using the Weather and Research
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convective boundary layer and transported to the south-west and over the
cities. In July 2014, the maximum increase in surface concentrations due to
fires in Central Africa is  ≈ &thinsp;150&thinsp;µg&thinsp;m<sup>−3</sup> for CO,
 ≈ &thinsp;10 to 20&thinsp;µg&thinsp;m<sup>−3</sup> for O<sub>3</sub> and
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an increase in particulate primary and organic matter.</p></abstract-html>
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