<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing with OASIS Tables v3.0 20080202//EN" "journalpub-oasis3.dtd">
<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0">
  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-18-17157-2018</article-id><title-group><article-title>Attributing differences in the fate of lateral boundary ozone in AQMEII3 models to physical process representations</article-title><alt-title>Attributing differences in the fate of lateral boundary ozone</alt-title>
      </title-group><?xmltex \runningtitle{Attributing differences in the fate of lateral boundary ozone}?><?xmltex \runningauthor{P.~Liu et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Liu</surname><given-names>Peng</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff2">
          <name><surname>Hogrefe</surname><given-names>Christian</given-names></name>
          <email>hogrefe.christian@epa.gov</email>
        <ext-link>https://orcid.org/0000-0003-3280-3513</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Im</surname><given-names>Ulas</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5177-5306</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Christensen</surname><given-names>Jesper H.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-6741-5839</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Bieser</surname><given-names>Johannes</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-2938-3124</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Nopmongcol</surname><given-names>Uarporn</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Yarwood</surname><given-names>Greg</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4201-3649</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Mathur</surname><given-names>Rohit</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-8927-5876</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Roselle</surname><given-names>Shawn</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Spero</surname><given-names>Tanya</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-1600-0422</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>NRC Research Associate, in the National Exposure Research Laboratory,
US Environmental Protection Agency,<?xmltex \hack{\break}?> Research Triangle Park, NC 27711, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>National Exposure Research Laboratory, US Environmental Protection
Agency, Research Triangle Park, NC 27711, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Aarhus University, Department of Environmental Science,
Frederiksborgvej 399, 4000, Roskilde, Denmark</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Helmholtz-Zentrum Geesthacht, Institute of Coastal Research,
Max-Planck-Str. 1, 21502 Geesthacht, Germany</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Ramboll, 7250 Redwood Boulevard, Suite 105, Novato, CA 94945, USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Christian Hogrefe (hogrefe.christian@epa.gov)</corresp></author-notes><pub-date><day>5</day><month>December</month><year>2018</year></pub-date>
      
      <volume>18</volume>
      <issue>23</issue>
      <fpage>17157</fpage><lpage>17175</lpage>
      <history>
        <date date-type="received"><day>8</day><month>February</month><year>2018</year></date>
           <date date-type="rev-request"><day>20</day><month>March</month><year>2018</year></date>
           <date date-type="rev-recd"><day>2</day><month>November</month><year>2018</year></date>
           <date date-type="accepted"><day>8</day><month>November</month><year>2018</year></date>
      </history>
      <permissions>
        
        
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018.html">This article is available from https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018.pdf</self-uri>
      <abstract>
    <p id="d1e192">Increasing emphasis has been placed on characterizing the contributions and
the uncertainties of ozone imported from outside the US. In chemical
transport models (CTMs), the ozone transported through lateral boundaries
(referred to as LB ozone hereafter) undergoes a series of physical and
chemical processes in CTMs, which are important sources of the uncertainty in
estimating the impact of LB ozone on ozone levels at the surface. By
implementing inert tracers for LB ozone, the study seeks to better understand
how differing representations of physical processes in regional CTMs may lead
to differences in the simulated LB ozone that eventually reaches the surface
across the US. For all the simulations in this study (including <inline-formula><mml:math id="M1" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula>), three chemically inert tracers
that generally represent the altitude ranges of the planetary boundary layer
(BC1), free troposphere (BC2), and upper troposphere–lower stratosphere
(BC3) are tracked to assess the simulated impact of LB specification.</p>
    <p id="d1e243">Comparing <inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, their differences in vertical grid
structure explain 10 %–60 % of their seasonally averaged differences in
inert tracers at the surface. Vertical turbulent mixing is the primary
contributor to the remaining differences in inert tracers across the US in
all seasons. Stronger vertical mixing in <inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> brings more BC2 downward,
leading to higher BCT (<inline-formula><mml:math id="M8" display="inline"><mml:mrow><mml:mtext>BCT</mml:mtext><mml:mo>=</mml:mo><mml:mtext>BC1</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula>) and <inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> at the surface in
<inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>. Meanwhile, the differences in inert tracers due to vertical mixing
are partially counteracted by their difference in sub-grid cloud mixing over
the southeastern US and the Gulf Coast region during summer. The process
of dry deposition adds extra gradients to the spatial distribution of the
differences in DM8A BCT by 5–10 <inline-formula><mml:math id="M11" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula> during winter and summer.</p>
    <p id="d1e334"><inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> show similar performance in inert tracers both
at the surface and aloft through most seasons, which suggests similarity
between the two models at process level. The largest difference is found in
summer. Sub-grid cloud mixing plays a primary role in their differences in
inert tracers over the southeastern US and the oceans in summer. Our
analysis of the vertical profiles of inert tracers also suggests that the
model differences in dry deposition over certain regions are offset by the
model differences in vertical turbulent mixing, leading to small differences
in inert tracers at the surface in these regions.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e367">Studies based on chemical transport models (CTMs) have shown that air
quality in the US can be considerably influenced by pollutants beyond the
US boundaries, such as through intercontinental transport and through
stratosphere-to-troposphere exchange (Zhang et al., 2011; Lin et al.,<?pagebreak page17158?> 2012;
Nopmongcol et al., 2016; Langford et al., 2017; Lin et al., 2017; Hogrefe et
al., 2018). Similar findings have also been reported based on routine
observations and field campaign measurements (e.g., Cooper et al., 2012;
Gratz et al., 2015; Langford et al., 2015), especially at rural and
elevated locations in the western US. Recent revisions to the National
Ambient Air Quality Standards (NAAQS) further lowered both the primary
(health-based) and secondary (welfare-based) standards for ground-based
ozone (Federal Register, 2015). Therefore, increasing emphasis has been
placed on the need to characterize the contributions and the uncertainties
of ozone imported from outside the US.</p>
      <p id="d1e370">The contribution of ozone from outside the US to the surface ozone within
the US has been estimated by several studies with different approaches,
including source sensitivity approaches (such as the “brute force” method;
e.g., Dolwick et al., 2015), the path-integral method (Dunker et al.,
2017), and tagged species approaches such as the integrated source
apportionment method (ISAM) for CMAQ (Kwok et al., 2015), ozone source
apportionment technology (OSAT) for CAMx (Ramboll, 2018), and chemically
reactive tracers (Baker et al., 2015; Nopmongcol et al., 2017).</p>
      <p id="d1e373">The simulated ozone levels by regional CTMs can be influenced by
uncertainties in the specification of lateral boundary (LB) conditions. For
example, in phase 3 of Air Quality Model Evaluation International
Initiative (AQMEII3), Hogrefe et al. (2018) analyzed the impact of LB ozone
derived from four global or hemispheric CTMs on the ozone predictions over
the US using CMAQ and found significantly varying impacts of LB conditions
on predicted surface ozone levels. Furthermore, LB ozone undergoes a series
of physical and chemical processes in CTMs, which may be represented
differently due to different model configurations and parameterizations
chosen by the models (Russell and Dennis, 2000). Limited efforts, however,
have been devoted to elucidating the reasons at the process level for
the noted similarities and differences among the model predictions in surface
ozone and the impact of LB ozone, though studies have suggested the
important role that the processes in CTMs play in explaining the model
differences. For example, also in AQMEII3, Solazzo et al. (2017) compared
the model errors in surface ozone predictions over the US and Europe
from several regional CTMs and showed that errors across a series of timescales could be attributed to different chemical and physical processes in
the CTMs.</p>
      <p id="d1e376">Understanding how the differences in model predictions can be attributed to
scientific processes in CTMs is important for several reasons. First,
comparison in fundamental processes can help to mitigate the reducible error
in air quality models, which can be achieved through scientific improvements
in the representations of the physical and chemical processes in CTMs so
that model prediction from a single CTM can be improved (e.g., Zhang et al.,
2012). Second, identifying the major process(es) contributing to the
variability across models can help to guide research directions to
reduce model uncertainty and error. Last, a better understanding of the
model similarities and differences at the process level could improve
multi-model ensembles by increasing the independence of ensemble members.</p>
      <p id="d1e380">This study therefore focuses on examining the impact of physical
treatments in CTMs on LB ozone and aims at a better understanding of how
different representations of physical processes in CTMs may lead to the
differences in the LB ozone that eventually reaches the surface across the
US. To keep track of the LB ozone, chemically inert tracers for LB ozone
have been implemented in all participating models in this study; the
chemical loss of LB ozone is excluded. The important thing to clarify is
that it is necessary to include the chemical loss of LB ozone when
quantitatively estimating the impact of LB ozone, as shown in the comparison
between inert and reactive LB ozone tracers by Baker et al. (2015). This
study, instead of providing such a quantitative estimate, aims at
understanding the model variability that originates from the physical
treatments in CTMs and its impact on the LB ozone reaching the surface. The
implementation of chemically inert tracers enables us to completely focus on
the impact of physical treatments in CTMs. Otherwise, it would be very
difficult to disentangle the impact of chemical processes from the impact of
physical processes if chemically reactive tracers for LB ozone are employed,
as chemical and physical processes are intricately coupled in CTMs.</p>
      <p id="d1e383">This paper is organized as follows. Section 2 describes the model
configurations and how the chemically inert tracers are implemented. In
Sect. 3, the seasonal impact of physical treatment in CTMs on inert
tracers at the surface is examined by comparing <inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> to several sensitivity
simulations. Then <inline-formula><mml:math id="M15" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> is used as a base case and the differences in
inert tracers between <inline-formula><mml:math id="M16" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and three other models are investigated and
discussed with respect to the physical processes in which inert tracers are
involved. Finally, the findings are summarized in Sect. 4.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p id="d1e424"><bold>(a)</bold> Simulation domain for <inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> (red solid
line), the simulation domain for <inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula> (red dashed line), and the
analysis domain in this study (shaded area in green). The simulation domain
of <inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> is the same size as <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> but shifts westward by
48 <inline-formula><mml:math id="M22" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula>. <bold>(b)</bold> The subregions in the analysis domain.</p></caption>
        <?xmltex \igopts{width=\textwidth}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f01.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><caption><p id="d1e508">Vertical grid structures for the chemical transport models used in
the four simulations, with filled circles for the vertical levels for
BC1, filled triangles for BC2, and open circles for BC3.</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f02.pdf"/>

      </fig>

</sec>
<sec id="Ch1.S2">
  <title>Methods</title>
<sec id="Ch1.S2.SS1">
  <title>Model description</title>
      <p id="d1e528">This study, performed as part of AQMEII3, investigates simulations conducted
by four research groups from the US and Europe using state-of-the-art
regional CTMs. The four simulations are named using the combination of the
regional CTMs and the models used to generate their meteorological inputs:
<inline-formula><mml:math id="M23" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M25" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula>. A description of the model
features and emissions can be found in the technical note by Galmarini et
al. (2017). The simulation period is the entire year of 2010, which was
determined by AQMEII3 based on the availability of emission and
observation data. The chemical boundary conditions for all simulations were
derived from the Composition Integrated<?pagebreak page17159?> Forecasting System (C-IFS) global
modeling system (Flemming et al., 2015) by the European Centre for
Medium-Range Weather Forecasts (ECMWF). The LB ozone derived from C-IFS has
been evaluated against observations (Hogrefe et al., 2018). <inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M28" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> share the same modeling domain (Fig. 1a). The size of the
modeling domain for <inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> is like that for <inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, but was
shifted westward by 48 <inline-formula><mml:math id="M31" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula>. <inline-formula><mml:math id="M32" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula>, however, has a very different domain
coverage than other models (Fig. 1a). Therefore, the results of inert
tracers for LB ozone are directly comparable among <inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>, and
<inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, but not <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Chemically inert tracers</title>
      <p id="d1e702">For each simulation, three chemically inert tracers were added specifically
at the lateral boundaries to track ozone at different altitudes from outside
the modeling domain. The three tracers, representing LB ozone from the
planetary boundary layer (PBL), the free troposphere, and the upper
troposphere–lower stratosphere, respectively, are defined as follows: BC1 for
vertical layers below 750 <inline-formula><mml:math id="M37" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M39" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula>); BC2 for layers
between 750 <inline-formula><mml:math id="M40" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M42" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula>) and 250 <inline-formula><mml:math id="M43" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula> (<inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M45" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula>); and BC3 for layers above 250 <inline-formula><mml:math id="M46" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula>. Initial conditions for all tracers
were set to zero and a 10-day spin-up period was used in the simulations.
The lateral boundary conditions (LBCs) of the tracers were set to be the
same values as the LBCs of ozone at the corresponding vertical layers, with
zero values assigned in other layers. For example, for <inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, BC1 is the
LB ozone from layer 1 to 21, BC2 from layer 22 to 31, and BC3 from layer 32
to 35 (Fig. 2). Therefore, these tracers can provide information on the
altitude ranges from which the LB ozone reaching the surface originates. Due
to the different vertical grid structure used by each model, differences
occur in the attributions of LB ozone to inert tracers across models. For
example, Fig. 2<?pagebreak page17160?> shows the typical pressure at each vertical level for the
four models. In <inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, BC2 starts from layer 22, with the pressure at the
bottom of the layer about 725 <inline-formula><mml:math id="M49" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula>, while in <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>, BC2 starts from layer 17,
with the pressure at the bottom of the layer about 755 <inline-formula><mml:math id="M51" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula>. Such
differences may result in differences in the relative contributions of BC1
and BC2 to the total inert tracer at the surface, but are not expected to
significantly change the total amount of BC1 and BC2 reaching the surface,
which is also confirmed later in Sect. 3. BC3 starts from very
similar pressure levels for <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula>, but is
different for <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> due to its very coarse vertical resolution in
the upper troposphere–lower stratosphere. The impact of such differences on
inert tracers at the surface is also found to be small in general as the
seasonal averaged contribution of BC3 at the surface is usually very small
(less than 1.5 <inline-formula><mml:math id="M56" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula>) relative to BC1 and BC2 across the US except for
summer.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p id="d1e895">Model description of the four simulations involved in the study.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.90}[.90]?><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="100pt"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="100pt"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M60" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Institute</oasis:entry>
         <oasis:entry colname="col2">US EPA</oasis:entry>
         <oasis:entry colname="col3">RAMBOLL Environ (US)</oasis:entry>
         <oasis:entry colname="col4">Helmholtz-Zentrum Geesthacht (Germany)</oasis:entry>
         <oasis:entry colname="col5">Aarhus University (Denmark)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Global meteorology</oasis:entry>
         <oasis:entry colname="col2">NCEP</oasis:entry>
         <oasis:entry colname="col3">NCEP</oasis:entry>
         <oasis:entry colname="col4">NCEP</oasis:entry>
         <oasis:entry colname="col5">ECMWF</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Regional modeling system</oasis:entry>
         <oasis:entry colname="col2">WRF3.4/CMAQ5.0.2</oasis:entry>
         <oasis:entry colname="col3">WRF3.4/CAMx6.2</oasis:entry>
         <oasis:entry colname="col4">COSMO-CLM/CMAQ5.0.1</oasis:entry>
         <oasis:entry colname="col5">WRF/DEHM</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Horizontal resolution</oasis:entry>
         <oasis:entry colname="col2">12 <inline-formula><mml:math id="M61" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">12 <inline-formula><mml:math id="M62" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">24 <inline-formula><mml:math id="M63" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">17 <inline-formula><mml:math id="M64" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Dry deposition for ozone and tracers</oasis:entry>
         <oasis:entry colname="col2">Pleim and Ran (2011)</oasis:entry>
         <oasis:entry colname="col3">Zhang et al. (2003)</oasis:entry>
         <oasis:entry colname="col4">Pleim and Ran (2011)</oasis:entry>
         <oasis:entry colname="col5">Simpson et al. (2003)</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Wet deposition for tracers</oasis:entry>
         <oasis:entry colname="col2">YES</oasis:entry>
         <oasis:entry colname="col3">NO</oasis:entry>
         <oasis:entry colname="col4">YES</oasis:entry>
         <oasis:entry colname="col5">YES</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Sub-grid cloud mixing in CTMs</oasis:entry>
         <oasis:entry colname="col2">YES</oasis:entry>
         <oasis:entry colname="col3">NO</oasis:entry>
         <oasis:entry colname="col4">YES</oasis:entry>
         <oasis:entry colname="col5">YES</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Parameterization for vertical turbulent mixing</oasis:entry>
         <oasis:entry colname="col2">ACM2 (Pleim, 2007)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M65" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula> theory (Ramboll, 2018)</oasis:entry>
         <oasis:entry colname="col4">ACM2</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M66" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula> theory (Christensen, 1997)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><caption><p id="d1e1161">Description of the sensitivity simulations.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Sensitivity simulations</oasis:entry>
         <oasis:entry colname="col2">Description</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_noddry</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Same as <inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> but no dry deposition for inert tracers</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nodwet</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Same as <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> but no wet deposition for inert tracers</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Same as <inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> but no sub-grid cloud mixing for inert tracers</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Same as <inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> but using the same vertical grid structure as <inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM_noddry</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Same as <inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula> but no dry deposition for inert tracers</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e1355">The tracers undergo the same physical processes as ozone, including 3-D
advective transport, vertical turbulent mixing, sub-grid cloud mixing (if
represented in CTMs), scavenging, and deposition. In all models, the
deposition velocity of tracers was set to be the same as that of ozone. The
physical processes that the inert tracers undergo in each model have been
summarized in Table 1. To better distinguish the impact of each physical
processes, a series of sensitivity simulations has been conducted for
<inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, including <inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_noddry</mml:mtext></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nodwet</mml:mtext></mml:mrow></mml:math></inline-formula>,
and <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> (as described in Table 2). Ideally,
the sensitivity simulations conducted for <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> are also desired for the
other three models. However, since these sensitivity simulations were not
part of the original design for AQMEII3 and entail additional nontrivial
resource commitments from each participating organization, most sensitivity
simulations are not available except for <inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM_noddry</mml:mtext></mml:mrow></mml:math></inline-formula>
(Table 2). In addition, the vertical resolution, especially in the free
troposphere, has been shown to be important for air quality models (e.g.,
Mathur et al., 2017; Eastham and Jacob, 2017). To investigate the impact of
this physical treatment on LB ozone, a sensitivity simulation
<inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> was conducted. This simulation is the same as
<inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> except that it uses the same vertical grid structure as <inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>, as
<inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> has the coarsest vertical resolution in the free troposphere among the
four models.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <title>Data for analysis</title>
      <p id="d1e1485">Due to the different modeling domain and horizontal resolution across the
models, the participating groups followed the AQMEII3 protocols and
re-gridded the modeled hourly values for inert tracers at the surface to a
common domain for analysis and comparison, covering the area from
23.5<inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">130.0</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W to 58.5<inline-formula><mml:math id="M91" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, <inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">59.5</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W
(green shaded area in Fig. 1a) with grid spacing of <inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.25</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.25</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>. In addition to the surface data, 3-D data for
inert tracers are also available for <inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, its sensitivity simulations,
and <inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and have been interpolated to the same elevation levels
so that the vertical profiles of inert tracers can be compared. The
corresponding 3-D data for <inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula> are not available, as 3-D
data were not included in the data archival protocols of AQMEII3.</p>
      <p id="d1e1611">Seven subregions are selected across the analysis domain (Fig. 1b) based
on their proximity to the lateral boundaries, elevations, and climate (Karl
and Koss, 1984), including WB (region close to the western boundary), NB (region
close to the northern boundary), MT (mountain west area), GP (Great Plains area),
NE (northeast), SE (southeast), and ATL (the Atlantic Ocean). When
calculating the statistical metrics for each subregion, only the grid cells
over land will be used for analysis except for the ATL subregion.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Results</title>
      <p id="d1e1621">In this section, the model results for the mixing ratios of total inert
tracers (namely the sum of BC1, BC2, and BC3, hereafter referred to as BCT) at
the surface and the relative contributions of each inert tracer to BCT are
examined. First, <inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> is used as a base case, and the impact of a
variety of physical processes on the inert tracers at the surface is
investigated by comparing <inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> with sensitivity simulations. Then, the
model differences are investigated and attributed to different physical
treatment in CTMs for the model pairs of <inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> versus <inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>
versus <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M105" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> versus <inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula>. All
analysis was conducted on a seasonal basis.</p>
      <p id="d1e1721">The metrics examined for BCT and the relative contributions of each tracer
include the daily maximum 8 <inline-formula><mml:math id="M107" display="inline"><mml:mi mathvariant="normal">h</mml:mi></mml:math></inline-formula> average (DM8A) values and the diurnal
cycles. The DM8A BCT and relative contributions are calculated as follows.
For each model, the 8 h window when the modeled DM8A ozone occurs is
found for each day at each <inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.25</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">0.25</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> grid
cell across the analysis domain. Then the average mixing ratios of each
tracer during that 8 h window are calculated using the modeled hourly
data at the surface, and these are referred to as DM8A BC1, DM8A BC2, and
DM8A BC3. Then DM8A BCT (in ppb), DM8A <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>, DM8A <inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>, and DM8A
<inline-formula><mml:math id="M111" display="inline"><mml:mrow><mml:mtext>BC3</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (in percentage) are calculated. Finally, the daily metrics are
averaged for each season. For the seasonal averaged diurnal cycle for inert
tracers, at each hour the daily values for inert tracers at that hour are
averaged over the season. The subsequent analysis mainly focuses on the
direct differences in the metrics above between two simulations (e.g., DM8A
<inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> from simulation A minus DM8A <inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> from simulation B).</p><?xmltex \hack{\newpage}?>
<?pagebreak page17161?><sec id="Ch1.S3.SS1">
  <?xmltex \opttitle{$\text{WRF}/\text{CMAQ}$}?><title>
          <inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>
        </title>
      <p id="d1e1831">The physical processes of sub-grid cloud mixing, wet scavenging, and dry
deposition are important processes that the inert tracers undergo and may
be treated differently by CTMs due to the differences in parameterization
methods, the meteorological inputs (Table 1), and/or the discrete grid
structures. With a series of sensitivity simulations for <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, how the
LB ozone reaching the surface across the US is modified by these processes
is investigated in this model.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><caption><p id="d1e1849">Differences in seasonal averaged DM8A BCT (ppb) between
simulations after averaging over all land grid cells over the analysis
domain. Values in parentheses are the standard deviations of the differences
between simulations over land.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Winter</oasis:entry>
         <oasis:entry colname="col3">Spring</oasis:entry>
         <oasis:entry colname="col4">Summer</oasis:entry>
         <oasis:entry colname="col5">Fall</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">10.3 (<inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.9</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">10.3 (<inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.2</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">12.6 (<inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">4.4</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5">9.7 (<inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.2</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.4</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.9</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.5 (<inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">1.5 (<inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">1.3 (<inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5">0.7 (<inline-formula><mml:math id="M137" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">4.6 (<inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.2</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">2.4 (<inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.6</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">5.2 (<inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.6</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5">1.9 (<inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.8</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">4.2 (<inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.5</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">0.9 (<inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.7</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">3.9 (<inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.6</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5">1.1 (<inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.8</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">1.3 (<inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.8</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">0.1 (<inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.7</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">0.1 (<inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.1</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5">1.2 (<inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.1</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">9.0 (<inline-formula><mml:math id="M158" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.3</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">15.0 (<inline-formula><mml:math id="M159" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">4.3</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">17.6 (<inline-formula><mml:math id="M160" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">6.0</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5">13.2 (<inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.8</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e2488">For DM8A BCT, it is not surprising to find that dry deposition significantly
reduces DM8A BCT for all seasons by as much as about 10 <inline-formula><mml:math id="M162" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula> averaged over
the US (Table 3). Sub-grid cloud mixing in general slightly increases DM8A
BCT (Table 3) because the sub-grid cloud mixing in CMAQ tends to mix the
air aloft (e.g., above the PBL), which is richer in BCT (especially BC2),
downward into the PBL. This is later confirmed by results on the relative
contributions of tracers. The largest impact of sub-grid cloud mixing is
found in summer, with increases in DM8A BCT of over 2.5 <inline-formula><mml:math id="M163" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula> across the eastern
US and the Atlantic Ocean. In spring and fall, the impact is generally
smaller but not negligible, as increases in DM8A BCT still exceed
1 <inline-formula><mml:math id="M164" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula>
regionally. In winter, the impact is less than 1 ppb across the US. Lastly,
for wet scavenging, little change in DM8A BCT (less than 0.1 <inline-formula><mml:math id="M165" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula> for domain
average) is found so that the impact of this process on the simulated inert
tracers is negligible for <inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and is not shown. In addition, the impact of
the three processes is relatively uniform across the US, as small
deviations are found (summarized in Table 3).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><caption><p id="d1e2534">Differences in the seasonal averaged DM8A <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (%) between
<inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M169" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> <bold>(a)</bold>, between
<inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M171" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> <bold>(b)</bold>, and between
<inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> <bold>(c)</bold>. All results are shown
as sensitivity simulation minus <inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>. The areas in white or grey are the
grid cells that are out of the simulation domain of <inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>.</p></caption>
          <?xmltex \igopts{width=\textwidth}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f03.pdf"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><caption><p id="d1e2664">Seasonal averaged vertical profiles of <inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:mtext>BC1</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC2</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> (in
percentage) for <inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> in winter (in black) and in summer (in red) over
the subregions at their local standard time of 14:00. The
numbers in the legend show the seasonal averaged maximum PBL height during
the daytime over each subregion.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f04.pdf"/>

        </fig>

      <p id="d1e2705">For the relative contributions of inert tracers, only the differences in
DM8A <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> between <inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and its sensitivity simulations are shown
(Fig. 3) to illustrate the changes in the relative contributions of inert
tracers at the surface, as the changes in DM8A <inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and in DM8A <inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>
are usually the same in magnitude with opposite sign. The changes in DM8A
<inline-formula><mml:math id="M182" display="inline"><mml:mrow><mml:mtext>BC3</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> are less than 0.5 % domain-wide in all seasons, except for the
differences between <inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> in summer,
which will be discussed later. The impact of dry deposition is usually
within <inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> % and the direction of the change varies with space and
time. At the surface, the removal of inert tracers is proportional to the
absolute mixing ratios of each tracer, which in turn will be updated through
vertical mixing in the PBL. In other words, the process of dry deposition
does not modify the relative contributions of inert tracers directly, but
through vertical turbulent mixing. Therefore, in regions where the vertical
gradient of the tracer is steeper within the PBL, a larger impact of dry
deposition on the DM8A <inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> is expected.<?pagebreak page17162?> To confirm this hypothesis, the
seasonal averaged vertical profiles of <inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:mtext>BC1</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC2</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and the maximum
daytime PBL height in <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> are examined in each subregion at 14:00 (local
standard time) (Fig. 4). For example, in WB and NE subregions, the change
in <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:mtext>BC1</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC2</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> from the surface to the top of the PBL is larger in summer
than winter, which is consistent with the larger differences seen in DM8A
<inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> between <inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M192" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> during summer
than winter (Fig. 3a). In contrast, the change in
<inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:mtext>BC1</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC2</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> from the surface to the top of the PBL is larger in winter than
summer in SE and ATL, which is consistent with the larger impact of dry
deposition over these two regions in winter. In addition to the vertical
gradient of <inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:mtext>BC1</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC2</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, the magnitude and direction for the change in
<inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:mtext>BC1</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC2</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> at the surface also depends on the amount of air exchanged
between the surface and aloft. Therefore, the impact of dry deposition
on <inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:mtext>BC1</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC2</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> varies in season and space.</p>
      <p id="d1e2985">The sensitivity to sub-grid cloud mixing shows that it always tends to
decrease DM8A (<inline-formula><mml:math id="M197" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>) and increase DM8A (<inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>) (Fig. 3b),
leading to slightly higher DM8A BCT in <inline-formula><mml:math id="M199" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> than <inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix<?pagebreak page17163?></mml:mtext></mml:mrow></mml:math></inline-formula> (Table 3).
The largest impact is found in summer, when convection
is most active and frequent, especially over the Gulf Coast area and the
Atlantic Ocean with a change in DM8A <inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> of about 10 % and in DM8A BCT
of about 2.5–5 <inline-formula><mml:math id="M202" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula>. In other seasons, sub-grid cloud mixing
mainly affects the western coastal area and the oceans with its impact on the
other areas across the US usually less than 1.0 <inline-formula><mml:math id="M203" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula> in DM8A BCT and less
than 5 % in DM8A <inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>. For wet scavenging, it is found that its impact
on the relative contributions of tracers is also negligible, with
differences in DM8A <inline-formula><mml:math id="M205" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> less than 0.1 % domain-wide in all seasons
(not shown). In addition to these three processes, vertical grid structure
is also an important model configuration in CTMs as it affects the vertical
transport of inert tracers and the attribution of LB ozone to inert tracers.
Comparing <inline-formula><mml:math id="M206" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> shows that the coarser
vertical structure in the free troposphere only slightly increases DM8A BCT
(Table 3) but significantly modifies the relative contributions of BC1 and
BC2 at the surface (Fig. 3c).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><caption><p id="d1e3113">Diurnal cycles for the differences in <inline-formula><mml:math id="M208" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (%) <bold>(a)</bold> and
in <inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (%) <bold>(b)</bold> between <inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M212" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M213" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>) during summer
over subregions. For each subregion, the regional average is represented by a red line
with the standard deviation in black bars.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f05.png"/>

        </fig>

      <p id="d1e3202">As mentioned, the impact of a given physical process in CTMs on LB ozone at
the surface may not be isolated from other physical processes. In this
study, vertical turbulent mixing could also be involved in determining the
differences in inert tracers at the surface between <inline-formula><mml:math id="M214" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and its sensitivity
simulations discussed above. To investigate the impact of vertical turbulent
mixing in conjunction with the physical treatment discussed above, the
diurnal cycles of the differences in <inline-formula><mml:math id="M215" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M216" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> at the surface are
examined between <inline-formula><mml:math id="M217" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and its sensitivity simulations. The results for
summer, when the largest diurnal variance usually occurs, are shown in Fig. 5.
The diurnal change in the differences in <inline-formula><mml:math id="M218" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> is generally much
smaller than the diurnally averaged differences in <inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> between <inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M221" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> and between <inline-formula><mml:math id="M222" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M223" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> over all subregions (Table 5), suggesting that
the impact of sub-grid cloud mixing and vertical resolution on the relative
contributions of inert tracers at the surface is in general much stronger than
the impact of diurnal variability in vertical mixing. In contrast, the
magnitude of the diurnal variance in the difference in <inline-formula><mml:math id="M224" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> exceeds the
diurnally averaged difference in <inline-formula><mml:math id="M225" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> in the subregions of WB and NB
between <inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M227" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> (Table 5), suggesting
a stronger dependence of the dry deposition process on vertical
turbulent mixing in determining<?pagebreak page17164?> the inert tracers at the surface. Similar
results are found for <inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (not shown). There is no obvious pattern in
the diurnal variance in the differences in the relative contributions of
inert tracers, except for the model pair of <inline-formula><mml:math id="M229" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula>. In summer, for example, their differences
in <inline-formula><mml:math id="M231" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M233" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M234" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>)
always decrease during daytime (Fig. 5). This is because sub-grid cloud
mixing becomes less effective in reducing the vertical gradient of inert
tracers in daytime due to stronger turbulent mixing in daytime than
nighttime.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><caption><p id="d1e3462"> </p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f06-part01.pdf"/>

        </fig>

<?xmltex \hack{\addtocounter{figure}{-1}}?><?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p id="d1e3474"><bold>(a)</bold> Seasonal averaged vertical profiles of <inline-formula><mml:math id="M235" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> (in ppb) for
<inline-formula><mml:math id="M236" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (black), <inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> (grey), and <inline-formula><mml:math id="M238" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>
(red) in summer over the subregions at their local standard time of 14:00. The bars represent the standard deviations over the subregion
(the standard deviations of <inline-formula><mml:math id="M239" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> are not shown,
as the values are almost the same as those of <inline-formula><mml:math id="M240" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>). The numbers in
the legend are the seasonal averaged maximum PBL height during the daytime over
each subregion for <inline-formula><mml:math id="M241" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (in black) and for <inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (in red).<bold>(b)</bold> Same as <bold>(a)</bold>, but for BC1 (in ppb).</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f06-part02.pdf"/>

        </fig>

      <p id="d1e3592">Lastly, the sum of the differences in <inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M244" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> at the surface
is approximately zero between <inline-formula><mml:math id="M245" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_noddry</mml:mtext></mml:mrow></mml:math></inline-formula>
and between <inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> over all subregions
in all seasons. For <inline-formula><mml:math id="M249" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M250" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>,
especially in summer, the differences in <inline-formula><mml:math id="M251" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> do not add up
to zero in the MT, GP, NE, and SE subregions (Fig. 5) due to the negative
differences in <inline-formula><mml:math id="M253" display="inline"><mml:mrow><mml:mtext>BC3</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>. This result suggests that sub-grid cloud mixing also
transports more BC3 downward through deep convection at high altitude. For
example, the vertical profiles of <inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> from the two simulations
clearly show that the mixing ratio of <inline-formula><mml:math id="M255" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> in <inline-formula><mml:math id="M256" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> is higher than
that in <inline-formula><mml:math id="M257" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> from the altitude <inline-formula><mml:math id="M258" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula>–4 <inline-formula><mml:math id="M259" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula> in the MT, GP, and NE regions and from <inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula>–6 <inline-formula><mml:math id="M261" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula> in SE
(Fig. 6a). In WB and NB, however, the mixing ratio of <inline-formula><mml:math id="M262" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> in
<inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> does not exceed that in <inline-formula><mml:math id="M264" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> until
about 2 <inline-formula><mml:math id="M265" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula> (Fig. 6a), so sub-grid cloud mixing has little impact
on the vertical transport of BC3 and the differences in <inline-formula><mml:math id="M266" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M267" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>
almost add up to zero (Fig. 5).</p>
</sec>
<sec id="Ch1.S3.SS2">
  <?xmltex \opttitle{$\text{WRF}/\text{CAMx}$ vs.\ $\text{WRF}/\text{CMAQ}$}?><title><inline-formula><mml:math id="M268" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> vs. <inline-formula><mml:math id="M269" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></title>
      <p id="d1e3909">This model pair has some important features in common, which the other model
pairs do not. The two models used the same meteorological inputs for CTMs
and were configured with the same horizontal resolution, so there
should be little difference in 3-D advection. Meanwhile, the two models use
different representations for the other important physical processes that
the inert tracers undergo, including vertical turbulent mixing, dry and wet
deposition, and sub-grid cloud mixing (Table 1).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p id="d1e3914">Differences in the seasonal averaged DM8A BCT (in ppb, <bold>a</bold>)
and DM8A <inline-formula><mml:math id="M270" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <bold>(b)</bold> between <inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M273" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus
<inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>) in the analysis domain. <bold>(c)</bold> The seasonal averaged
ratio of dry deposition velocity (<inline-formula><mml:math id="M275" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> over <inline-formula><mml:math id="M276" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>) for ozone. The
areas in white or grey are the grid cells that are out of the simulation
domain.</p></caption>
          <?xmltex \igopts{width=\textwidth}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f07.pdf"/>

        </fig>

      <p id="d1e4016">The model differences in DM8A BCT are relatively small (within <inline-formula><mml:math id="M277" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M278" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula>)
in spring and fall. In winter and summer, however, the differences can
reach as much as 7.5–10 <inline-formula><mml:math id="M279" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula> regionally (Fig. 7a).
The results demonstrate that physical<?pagebreak page17165?> treatment in CTMs serves as an
important source of uncertainty when estimating the impact of LB ozone on
ozone level at the surface aside from the meteorological inputs and the
lateral boundary conditions. Differences in DM8A <inline-formula><mml:math id="M280" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and DM8A BCT
between <inline-formula><mml:math id="M281" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M282" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> show strong spatial correlations with similar
magnitudes except for summer (Fig. 7b). Two processes lead to
weaker agreement between the difference in inert tracers and the
difference in ozone in summer. First, chemical decay due to the photolysis
of LB ozone is the strongest in summer and not represented by inert tracers.
Second, the chemical formation of ozone peaks in summer. The results suggest
that the impact of physical treatment can compete or even overwhelm the
impact of chemistry on the LB ozone reaching the surface in some cases.
There are significant differences in the relative contributions of BC1 and
BC2 at the surface in all seasons, which are usually much larger than the
differences found in <inline-formula><mml:math id="M283" display="inline"><mml:mrow><mml:mtext>BC3</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (within in 2.5 %) in all seasons. Hence, only
the results in DM8A <inline-formula><mml:math id="M284" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> are shown for this model pair (Fig. 8a) to illustrate the model differences in the relative contributions of
inert tracers at the surface.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><caption><p id="d1e4106">Differences in the seasonal averaged DM8A <inline-formula><mml:math id="M285" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (%) between
<inline-formula><mml:math id="M286" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M287" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M288" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M289" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>) <bold>(a)</bold> and between
<inline-formula><mml:math id="M290" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M291" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M292" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus
<inline-formula><mml:math id="M293" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula>) <bold>(b)</bold> in the analysis domain.</p></caption>
          <?xmltex \igopts{width=\textwidth}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f08.pdf"/>

        </fig>

      <?pagebreak page17166?><p id="d1e4230">The impact of vertical grid structure on the model differences is first
examined by comparing <inline-formula><mml:math id="M294" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M295" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M296" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus
<inline-formula><mml:math id="M297" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula>. For DM8A BCT, about 10 %, 60 %,
20 %,
and 40 % of the difference between <inline-formula><mml:math id="M298" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M299" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> over land can be
attributed to the difference in vertical resolution in winter, spring,
summer, and fall, respectively (Table 3). For the relative contributions of
inert tracers, about 60 % of the differences in DM8A <inline-formula><mml:math id="M300" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> between
<inline-formula><mml:math id="M301" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M302" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> over land can be attributed to their differences
in vertical resolution in all seasons (Fig. 8b; Table 4).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><caption><p id="d1e4345">Differences in seasonal averaged DM8A <inline-formula><mml:math id="M303" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (%) between
simulations after averaging over all land grid cells over the analysis
domain. Values in parentheses are the standard deviations of the differences
between simulations over land.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Winter</oasis:entry>
         <oasis:entry colname="col3">Spring</oasis:entry>
         <oasis:entry colname="col4">Summer</oasis:entry>
         <oasis:entry colname="col5">Fall</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M304" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M305" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M306" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.4</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M307" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.0</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M308" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.1</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M309" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.3</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">0.4 (<inline-formula><mml:math id="M310" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.6</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M311" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.2</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M312" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.2</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M313" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M314" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">1.5 (<inline-formula><mml:math id="M315" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.6</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">2.4 (<inline-formula><mml:math id="M316" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.3</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">4.6 (<inline-formula><mml:math id="M317" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.2</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5">2.8 (<inline-formula><mml:math id="M318" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M319" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M320" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M321" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8.1</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M322" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.5</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M323" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8.5</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M324" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.1</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M325" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7.5</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M326" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.0</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M327" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">9.1</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M328" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.6</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M329" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M330" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M331" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">14.6</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M332" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.9</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M333" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">14.8</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M334" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">4.1</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M335" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">13.5</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M336" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">8.2</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M337" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">15.6</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M338" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5.9</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M339" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M340" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M341" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6.4</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M342" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">4.8</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M343" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6.3</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M344" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">3.2</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M345" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6.0</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M346" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5.7</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M347" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6.8</mml:mn></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M348" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">4.8</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M349" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M350" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.4 (<inline-formula><mml:math id="M351" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">1.4 (<inline-formula><mml:math id="M352" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.0</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col4">3.7 (<inline-formula><mml:math id="M353" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.2</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col5">1.4 (<inline-formula><mml:math id="M354" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.7</mml:mn></mml:mrow></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T5" specific-use="star"><caption><p id="d1e5018">Differences in <inline-formula><mml:math id="M355" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (%) averaged over 24 <inline-formula><mml:math id="M356" display="inline"><mml:mi mathvariant="normal">h</mml:mi></mml:math></inline-formula> in the
diurnal cycle over seven subregions in summer between <inline-formula><mml:math id="M357" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and its
sensitivity simulations and between <inline-formula><mml:math id="M358" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M359" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula>.
The numbers in parentheses represent the range of the diurnal
differences in <inline-formula><mml:math id="M360" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (%), namely the maximum minus the minimum within the
diurnal cycle of the difference in <inline-formula><mml:math id="M361" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.95}[.95]?><oasis:tgroup cols="8">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M362" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (%)</oasis:entry>
         <oasis:entry colname="col2">WB</oasis:entry>
         <oasis:entry colname="col3">NB</oasis:entry>
         <oasis:entry colname="col4">MT</oasis:entry>
         <oasis:entry colname="col5">GP</oasis:entry>
         <oasis:entry colname="col6">NE</oasis:entry>
         <oasis:entry colname="col7">SE</oasis:entry>
         <oasis:entry colname="col8">ATL</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M363" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M364" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">1.6 (1.5)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M365" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:math></inline-formula> (1.4)</oasis:entry>
         <oasis:entry colname="col4">1.8 (0.4)</oasis:entry>
         <oasis:entry colname="col5">2.3 (0.7)</oasis:entry>
         <oasis:entry colname="col6">2.9 (1.0)</oasis:entry>
         <oasis:entry colname="col7">1.5 (0.8)</oasis:entry>
         <oasis:entry colname="col8">0.2 (0.01)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M366" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M367" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">2.3 (1.5)</oasis:entry>
         <oasis:entry colname="col3">5.6 (1.0)</oasis:entry>
         <oasis:entry colname="col4">1.6 (0.7)</oasis:entry>
         <oasis:entry colname="col5">5.0 (1.6)</oasis:entry>
         <oasis:entry colname="col6">5.4 (1.7)</oasis:entry>
         <oasis:entry colname="col7">6.5 (1.1)</oasis:entry>
         <oasis:entry colname="col8">13.8 (0.1)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M368" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M369" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M370" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8.7</mml:mn></mml:mrow></mml:math></inline-formula> (0.7)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M371" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10.1</mml:mn></mml:mrow></mml:math></inline-formula> (1.7)</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M372" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3.8</mml:mn></mml:mrow></mml:math></inline-formula> (0.6)</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M373" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5.2</mml:mn></mml:mrow></mml:math></inline-formula> (0.7)</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M374" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7.8</mml:mn></mml:mrow></mml:math></inline-formula> (0.5)</oasis:entry>
         <oasis:entry colname="col7"><inline-formula><mml:math id="M375" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4.6</mml:mn></mml:mrow></mml:math></inline-formula> (0.6)</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M376" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5.9</mml:mn></mml:mrow></mml:math></inline-formula> (0.1)</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M377" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M378" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M379" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7.0</mml:mn></mml:mrow></mml:math></inline-formula> (1.2)</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M380" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11.8</mml:mn></mml:mrow></mml:math></inline-formula> (2.6)</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M381" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.1</mml:mn></mml:mrow></mml:math></inline-formula> (0.6)</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M382" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.8</mml:mn></mml:mrow></mml:math></inline-formula> (0.9)</oasis:entry>
         <oasis:entry colname="col6"><inline-formula><mml:math id="M383" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3.8</mml:mn></mml:mrow></mml:math></inline-formula> (1.0)</oasis:entry>
         <oasis:entry colname="col7">2.0 (1.9)</oasis:entry>
         <oasis:entry colname="col8">16.1 (0.3)</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <?pagebreak page17168?><p id="d1e5485">As to the impact of other physical processes on the model differences, while
the wet deposition of inert tracers is not represented in <inline-formula><mml:math id="M384" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>, our
analysis for <inline-formula><mml:math id="M385" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and its sensitivity simulations in the previous
section has shown that the impact of wet deposition is negligible in
<inline-formula><mml:math id="M386" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, and therefore the absence of this process in <inline-formula><mml:math id="M387" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> should not
be a significant contributor to the model differences in inert tracers. The
impact of sub-grid cloud mixing in <inline-formula><mml:math id="M388" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> is usually pronounced over ocean
and coastal regions with an average change of less than 1 ppb in DM8A BCT
over land except during summer (Table 3). Sub-grid cloud mixing in <inline-formula><mml:math id="M389" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>
also always decreases <inline-formula><mml:math id="M390" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and increases <inline-formula><mml:math id="M391" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> at the surface.
Although <inline-formula><mml:math id="M392" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> does not represent this process, the DM8A <inline-formula><mml:math id="M393" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> in
<inline-formula><mml:math id="M394" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> is usually lower than that in <inline-formula><mml:math id="M395" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> (Fig. 8b) over land.
Therefore, the remaining differences between
<inline-formula><mml:math id="M396" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M397" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> do not result from wet scavenging
or sub-grid cloud mixing. To investigate the impact of dry deposition on
DM8A BCT, the seasonal averaged dry deposition velocity at the surface is
compared between the two models, and a correlation is seen between the
differences in BCT and the differences in dry deposition velocity. The
differences in BCT (<inline-formula><mml:math id="M398" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M399" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>; Fig. 7a) tend to
increase when and where the dry deposition velocity in <inline-formula><mml:math id="M400" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> is smaller
(Fig. 7c). For example, in winter, the difference in DM8A BCT in
the north is about 5 <inline-formula><mml:math id="M401" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula> higher than that in the south, with a lower dry
deposition velocity found in <inline-formula><mml:math id="M402" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> over the northern part of the domain.
Similar results also are seen in summer. In addition, the spatial
distributions of the differences in BCT are more uniform in spring and fall
than those in winter and summer and, correspondingly, the spatial
distributions of the ratio of dry deposition velocity are also more uniform
in spring and fall. Therefore, we believe that the large spatial gradient of
the difference in DM8A BCT in winter and summer between the two models is
primarily due to their differences in dry deposition.</p>
      <?pagebreak page17169?><p id="d1e5715">However, dry deposition does not explain the higher DM8A BCT in <inline-formula><mml:math id="M403" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>
when the dry deposition velocity in <inline-formula><mml:math id="M404" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> is also faster, such as in
spring. In addition, the remaining model difference in the relative
contributions of inert tracers at the surface (as shown in Fig. 8b) cannot be explained
by the difference in dry deposition alone because,
as mentioned above, dry deposition modifies the relative contributions
of inert tracers at the surface through vertical turbulent mixing with
relatively small changes in the relative contributions of inert tracers at
the surface. Therefore, the remaining differences in inert tracers at the
surface can only be explained by their difference in vertical turbulent
mixing. <inline-formula><mml:math id="M405" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> used the parameterization ACM2 (Pleim, 2007), while <inline-formula><mml:math id="M406" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>
used “<inline-formula><mml:math id="M407" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula> theory” (Table 1). Under neutral and stable conditions, both
parameterizations can adequately characterize vertical mixing (Ramboll,
2018), while during periods of deep vertical convection, <inline-formula><mml:math id="M408" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula> theory is less
efficient in the mixing of the convective boundary layer (Ramboll, 2018).
However, our results indicate that <inline-formula><mml:math id="M409" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> always tends to have stronger
vertical turbulent mixing than <inline-formula><mml:math id="M410" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>. On the one hand, as shown in Fig. 7,
DM8A BCT in <inline-formula><mml:math id="M411" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> is higher than that in <inline-formula><mml:math id="M412" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> even when the dry
deposition velocity in <inline-formula><mml:math id="M413" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> is faster, indicating that more air aloft
(with richer BCT) is brought downward to compensate for the loss of inert
tracers. On the other hand, the DM8A <inline-formula><mml:math id="M414" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> in <inline-formula><mml:math id="M415" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> is always lower
than that in <inline-formula><mml:math id="M416" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> over land (Fig. 8b) with correspondingly
higher DM8A <inline-formula><mml:math id="M417" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (not shown), again suggesting that <inline-formula><mml:math id="M418" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> mixes more
air from aloft (with lower <inline-formula><mml:math id="M419" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and higher <inline-formula><mml:math id="M420" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>) downward than
<inline-formula><mml:math id="M421" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>. In addition, the NB subregion usually shows larger differences in
DM8A <inline-formula><mml:math id="M422" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> than other regions (Fig. 8b). This is because the
vertical gradients of <inline-formula><mml:math id="M423" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> and BC1 in NB from the surface to 3 <inline-formula><mml:math id="M424" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula> are
usually steeper than the gradients in other regions in <inline-formula><mml:math id="M425" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (e.g., in
summer, as shown in Fig. 6a, b), so the stronger vertical mixing in
<inline-formula><mml:math id="M426" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> tends to have a larger impact on inert tracers at the surface in
this region. The stronger vertical mixing in <inline-formula><mml:math id="M427" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> also compensates for
the lack of sub-grid cloud mixing to a certain extent, leading to smaller
differences in DM8A BCT and DM8A <inline-formula><mml:math id="M428" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>, especially over the SE and the Gulf
Coast region during summer.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10" specific-use="star"><caption><p id="d1e6021"><bold>(a)</bold> Differences in the seasonal averaged diurnal cycles of <inline-formula><mml:math id="M429" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>
(in percentage) and in <inline-formula><mml:math id="M430" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (in percentage) between
<inline-formula><mml:math id="M431" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M432" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M433" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> minus
<inline-formula><mml:math id="M434" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula>) over the WB subregion. For each season and
hour, the regional average is shown in red with the standard deviation shown
in black bars.
Panel <bold>(b)</bold> is the same as <bold>(a)</bold>, but over the NB subregion.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f09.pdf"/>

        </fig>

      <p id="d1e6111">To further illustrate the role of differences in vertical mixing between the
two models, the diurnal cycles of the differences in <inline-formula><mml:math id="M435" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M436" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>
between <inline-formula><mml:math id="M437" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M438" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> are examined over the
subregions. Little variance (less than 1 %) is found over most of the
subregions, except that a clear diurnal change is noticed over WB and NB in
most seasons. Over these two regions, the differences in <inline-formula><mml:math id="M439" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M440" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>
(Fig. 9a, b) grow from night to daytime as the vertical turbulent mixing
becomes stronger.</p>
      <p id="d1e6187">To summarize, 10 % to 60 % of the seasonal averaged differences in inert
tracers between <inline-formula><mml:math id="M441" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M442" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> at the surface can be attributed to
their difference in the vertical grid structure in the free troposphere. Vertical turbulent mixing primarily contributes to the remaining differences
across the entire land in all seasons. Stronger vertical mixing in <inline-formula><mml:math id="M443" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>
brings more BC2 downward, leading to higher DM8A BCT and <inline-formula><mml:math id="M444" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> at the
surface in <inline-formula><mml:math id="M445" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>. The differences in inert tracers due to vertical mixing
are partially counteracted by their difference in sub-grid cloud mixing over
the SE and the Gulf Coast region during summer. The process of dry
deposition adds extra gradients to the spatial distribution of the
differences in DM8A BCT by about 5–10 <inline-formula><mml:math id="M446" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula> during winter and
summer. Unfortunately, it is impossible to further quantitatively attribute
the model differences in inert tracers to the processes of dry deposition
and vertical turbulent mixing with the sensitivity simulations available in
this study.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11" specific-use="star"><caption><p id="d1e6260">Differences in the seasonal averaged DM8A BCT (in ppb, <bold>a</bold>)
and DM8A <inline-formula><mml:math id="M447" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (in percentage, <bold>b</bold>) between <inline-formula><mml:math id="M448" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M449" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M450" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M451" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>) in the analysis domain. The areas
in white or grey are the grid cells that are out of the simulation domain of
either of the two models.</p></caption>
          <?xmltex \igopts{width=\textwidth}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f10.pdf"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS3">
  <?xmltex \opttitle{$\text{COSMO-CLM}/\text{CMAQ}$ vs.\ $\text{WRF}/\text{CMAQ}$}?><title><inline-formula><mml:math id="M452" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> vs. <inline-formula><mml:math id="M453" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></title>
      <p id="d1e6366">Unlike the model pair in the previous section, <inline-formula><mml:math id="M454" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M455" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>
do not share the same meteorological inputs; however, the same physical
parameterizations are used in CMAQ to represent the processes that inert tracers
undergo (Table 1). Furthermore, the two models have similar vertical
resolution from the surface up to about 400 <inline-formula><mml:math id="M456" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula> (Fig. 2), which covers the
majority of the pressure range for BC1 and BC2. The differences in DM8A BCT
and the relative contributions of inert tracers for this model pair are
usually much smaller than the differences between <inline-formula><mml:math id="M457" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M458" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>. For
example, the differences in DM8A BCT are within 2.5 <inline-formula><mml:math id="M459" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula> (Table 3; Fig. 10a) across most of the US. The results indicate that the uncertainty
stemming from physical treatment in CTMs may rival or exceed the
uncertainty from meteorological inputs, especially when nudging is applied
to generate the meteorological fields (Table 1) with constraints above the
PBL at synoptic scales. The largest differences at the surface occur in the
summer over the SE and ATL subregions with lower DM8A BCT in <inline-formula><mml:math id="M460" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>
by about 5 and 10 <inline-formula><mml:math id="M461" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula>, respectively. This is because the large
difference in BC2 is not offset by the difference in BC1 or BC3 as in other
regions (Table 6). The physical process(es) contributing to the large
differences over the two areas will be discussed later.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T6" specific-use="star"><caption><p id="d1e6454">Seasonally averaged differences between <inline-formula><mml:math id="M462" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M463" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>
(<inline-formula><mml:math id="M464" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> minus <inline-formula><mml:math id="M465" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>) in BC1 (ppb) at the surface, in BC2 (ppb)
and BC3 (ppb) at the surface, and at a specific elevation (above ground level) in summer at 14:00 LST
over seven subregions.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="9">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col3">WB</oasis:entry>

         <oasis:entry colname="col4">NB</oasis:entry>

         <oasis:entry colname="col5">MT</oasis:entry>

         <oasis:entry colname="col6">GP</oasis:entry>

         <oasis:entry colname="col7">NE</oasis:entry>

         <oasis:entry colname="col8">SE</oasis:entry>

         <oasis:entry colname="col9">ATL</oasis:entry>

       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">

         <oasis:entry namest="col1" nameend="col2">BC1 at the surface </oasis:entry>

         <oasis:entry colname="col3"><inline-formula><mml:math id="M466" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col4"><inline-formula><mml:math id="M467" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M468" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6">0.8</oasis:entry>

         <oasis:entry colname="col7"><inline-formula><mml:math id="M469" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col8">4.0</oasis:entry>

         <oasis:entry colname="col9">2.9</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry rowsep="1" colname="col1" morerows="3">BC2</oasis:entry>

         <oasis:entry colname="col2">7 <inline-formula><mml:math id="M470" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col3"><inline-formula><mml:math id="M471" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">24.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col4"><inline-formula><mml:math id="M472" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">17.6</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M473" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">25.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6"><inline-formula><mml:math id="M474" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">19.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col7"><inline-formula><mml:math id="M475" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">23.6</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col8"><inline-formula><mml:math id="M476" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">15.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col9"><inline-formula><mml:math id="M477" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">14.8</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">5 <inline-formula><mml:math id="M478" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col3"><inline-formula><mml:math id="M479" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col4"><inline-formula><mml:math id="M480" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5.5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M481" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">15.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6"><inline-formula><mml:math id="M482" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11.7</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col7"><inline-formula><mml:math id="M483" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11.7</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col8"><inline-formula><mml:math id="M484" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col9"><inline-formula><mml:math id="M485" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8.0</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">3 <inline-formula><mml:math id="M486" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col3"><inline-formula><mml:math id="M487" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col4"><inline-formula><mml:math id="M488" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3.5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M489" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8.5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6"><inline-formula><mml:math id="M490" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">11.6</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col7"><inline-formula><mml:math id="M491" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col8"><inline-formula><mml:math id="M492" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">15.3</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col9"><inline-formula><mml:math id="M493" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7.4</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col2">surface</oasis:entry>

         <oasis:entry colname="col3">3.2</oasis:entry>

         <oasis:entry colname="col4">1.8</oasis:entry>

         <oasis:entry colname="col5"><inline-formula><mml:math id="M494" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.6</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col6"><inline-formula><mml:math id="M495" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4.2</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col7"><inline-formula><mml:math id="M496" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col8"><inline-formula><mml:math id="M497" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">9.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col9"><inline-formula><mml:math id="M498" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10.9</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1" morerows="3">BC3</oasis:entry>

         <oasis:entry colname="col2">7 <inline-formula><mml:math id="M499" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col3">16.3</oasis:entry>

         <oasis:entry colname="col4">14.2</oasis:entry>

         <oasis:entry colname="col5">22.5</oasis:entry>

         <oasis:entry colname="col6">15.4</oasis:entry>

         <oasis:entry colname="col7">25.1</oasis:entry>

         <oasis:entry colname="col8">17.2</oasis:entry>

         <oasis:entry colname="col9">20.4</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">5 <inline-formula><mml:math id="M500" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col3">2.6</oasis:entry>

         <oasis:entry colname="col4">1.8</oasis:entry>

         <oasis:entry colname="col5">7.1</oasis:entry>

         <oasis:entry colname="col6">6.1</oasis:entry>

         <oasis:entry colname="col7">8.0</oasis:entry>

         <oasis:entry colname="col8">12.3</oasis:entry>

         <oasis:entry colname="col9">10.1</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">3 <inline-formula><mml:math id="M501" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col3"><inline-formula><mml:math id="M502" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

         <oasis:entry colname="col4">0.4</oasis:entry>

         <oasis:entry colname="col5">4.5</oasis:entry>

         <oasis:entry colname="col6">3.6</oasis:entry>

         <oasis:entry colname="col7">2.5</oasis:entry>

         <oasis:entry colname="col8">1.4</oasis:entry>

         <oasis:entry colname="col9">1.6</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col2">surface</oasis:entry>

         <oasis:entry colname="col3">0.5</oasis:entry>

         <oasis:entry colname="col4">0.1</oasis:entry>

         <oasis:entry colname="col5">4.2</oasis:entry>

         <oasis:entry colname="col6">2.8</oasis:entry>

         <oasis:entry colname="col7">1.0</oasis:entry>

         <oasis:entry colname="col8">0.8</oasis:entry>

         <oasis:entry colname="col9"><inline-formula><mml:math id="M503" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>

       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e7116">The difference in the relative contributions of inert tracers at the surface
is dominated by the difference in DM8A <inline-formula><mml:math id="M504" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and DM8A <inline-formula><mml:math id="M505" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> over most
regions in all seasons, except MT, GP, and NE in summer, when the
differences in DM8A <inline-formula><mml:math id="M506" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and in DM8A <inline-formula><mml:math id="M507" display="inline"><mml:mrow><mml:mtext>BC3</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> dominate (Table 6).
Therefore, the model differences in DM8A <inline-formula><mml:math id="M508" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> are shown to demonstrate
the model differences in the relative contributions of inert tracers (Fig. 10b). The difference in DM8A <inline-formula><mml:math id="M509" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> is in general small (within
5 %) over most of the US, except during the summer. In summer, the large
differences in DM8A <inline-formula><mml:math id="M510" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> over MT and GP result from their differences in
BC2 and BC3 at the surface (Table 6) due to their difference in vertical
resolution above 400 <inline-formula><mml:math id="M511" display="inline"><mml:mi mathvariant="normal">hPa</mml:mi></mml:math></inline-formula>. Over SE and ATL, however, the large differences in
<inline-formula><mml:math id="M512" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> result from their difference in BC2 alone at the surface, suggesting
the impact of physical processes other than vertical resolution in these two
regions.</p>
      <p id="d1e7224">In SE and ATL during summer, <inline-formula><mml:math id="M513" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> shows much larger vertical
gradients in BC1 and in <inline-formula><mml:math id="M514" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> than <inline-formula><mml:math id="M515" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> from 5 to 3 <inline-formula><mml:math id="M516" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula> (Fig. 6a, b).
Of all the physical processes that inert tracers undergo, sub-grid cloud
mixing and horizontal transport may contribute to the large difference in
vertical gradient at this altitude range. Separate analysis reveals that the
precipitation over the southeastern US, which is mainly convective rain in
summer given the horizontal resolution of the simulations, is smaller in
<inline-formula><mml:math id="M517" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> than in <inline-formula><mml:math id="M518" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (not shown), suggesting weaker sub-grid
cloud mixing in <inline-formula><mml:math id="M519" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>. By comparing the vertical profiles of
<inline-formula><mml:math id="M520" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M521" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, similar vertical
gradients in <inline-formula><mml:math id="M522" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> and BC1 are found between these two simulations in
ATL. The results confirm that much less BC2 is mixed downward from 3–5 <inline-formula><mml:math id="M523" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula>
into the PBL in <inline-formula><mml:math id="M524" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, and the difference in BC2
cannot be compensated for by the differences in BC1 and BC3, leading to the
large negative differences in BCT at the surface between the two models. In
SE, however, the vertical gradient in <inline-formula><mml:math id="M525" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> from 5 to 3 <inline-formula><mml:math id="M526" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula> is
still larger than that in <inline-formula><mml:math id="M527" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_nocldmix</mml:mtext></mml:mrow></mml:math></inline-formula>, which is likely
due to the differences in horizontal advection between <inline-formula><mml:math id="M528" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M529" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>.</p>
      <?pagebreak page17171?><p id="d1e7418">In general, the two models show similar vertical profiles of BC1 and
<inline-formula><mml:math id="M530" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> over the subregions through all seasons, which again suggests
similarity between the two models at the process level. The vertical
profiles in summer are shown (Fig. 6a, b) and discussed as the largest
differences in inert tracers are found in summer both at the surface and
aloft. Furthermore, the vertical profiles suggest the potential
compensation between different physical processes in this season over
certain subregions, leading to small differences in DM8A BCT at the
surface. In WB and NB, <inline-formula><mml:math id="M531" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> in <inline-formula><mml:math id="M532" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> begins to exceed that
in <inline-formula><mml:math id="M533" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> from about 2 <inline-formula><mml:math id="M534" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula>, which can be due to its stronger vertical
turbulent mixing as suggested by PBL height (Fig. 6a). However, BC1 in
<inline-formula><mml:math id="M535" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> is lower than <inline-formula><mml:math id="M536" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> at any altitude (Fig. 6b),
suggesting that the difference in BC1 at the surface (about 2.3 <inline-formula><mml:math id="M537" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula>) is not
dominated by their difference in vertical turbulent mixing, but by their
difference in dry deposition. Though <inline-formula><mml:math id="M538" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> also tends to remove
more <inline-formula><mml:math id="M539" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> at the surface by dry deposition, the
<inline-formula><mml:math id="M540" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula>
at the surface is compensated for by mixing more air aloft downward through its
stronger vertical turbulent mixing. One thing to point out is that different
parameterizations are used to diagnose PBL height in their simulations for
meteorology, with ACM2 in WRF and an extended MYJ scheme (Doms et al., 2011)
in COSMO-CLM, so that the PBL height can be defined differently. However, as
a very large difference in PBL height is seen here between the two models, PBL
height is a reasonable factor to suggest the potential difference in their
vertical turbulent mixing. Similarly, in GP, the BC1 in <inline-formula><mml:math id="M541" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> is
always higher than that in <inline-formula><mml:math id="M542" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (Fig. 6a), suggesting weaker dry
deposition. At the same time, the less efficient removal at the surface
helps to decrease the difference in <inline-formula><mml:math id="M543" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> at the surface, since less
<inline-formula><mml:math id="M544" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> in <inline-formula><mml:math id="M545" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> is available aloft (Fig. 6b) in this region.
As a result, the difference in <inline-formula><mml:math id="M546" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> decreases from 3 <inline-formula><mml:math id="M547" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula> to the surface.
Conversely, in MT, <inline-formula><mml:math id="M548" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> in <inline-formula><mml:math id="M549" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> is lower than <inline-formula><mml:math id="M550" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>
until about 2 <inline-formula><mml:math id="M551" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula>, while BC1 shows the opposite. The results suggest that the
differences in inert tracers over MT are dominated by the stronger vertical
mixing in <inline-formula><mml:math id="M552" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> alone rather than by other physical processes. The
MT region may also influence its neighboring region through horizontal
advection, leading to the slight increase in the difference in
<inline-formula><mml:math id="M553" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula>
and in BC1 over GP from 7 to 3 <inline-formula><mml:math id="M554" display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula>.</p>
      <p id="d1e7700">To summarize, the two models show similar vertical profiles of BC1 and
<inline-formula><mml:math id="M555" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> over subregions across most seasons, which suggests
similarity between the two models at process level. The largest differences
are noted during summer. The different attributions of LB ozone to BC2<?pagebreak page17172?> and
BC3 between the two models in general have a small impact on DM8A BCT at the
surface, with the largest difference in DM8A <inline-formula><mml:math id="M556" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>+</mml:mo><mml:mtext>BC3</mml:mtext></mml:mrow></mml:math></inline-formula> of about 2.0 <inline-formula><mml:math id="M557" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula> found
in summer over MT, GP, and NE. At the same time, the different attributions
of BC2 and BC3 significantly change the relative contributions of BC2 and
BC3 at the surface over the three regions. The results are similar to what
is found between <inline-formula><mml:math id="M558" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M559" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> in which the
attributions of LB ozone to BC1 and BC2 are significantly different. The
model differences in sub-grid cloud mixing play a primary role in their
large differences in DM8A BCT and DM8A <inline-formula><mml:math id="M560" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> over ATL and SE in summer.
Our analysis also suggests model differences in vertical turbulent
mixing over most of the domain and in dry deposition over certain
subregions in summer. However, the impact of different dry deposition on
inert tracers at the surface is almost offset by the model difference in
vertical turbulent mixing on inert tracers.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <?xmltex \opttitle{$\text{WRF}/\text{DEHM}$ vs.\ $\text{WRF}/\text{CMAQ}$}?><title><inline-formula><mml:math id="M561" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula> vs. <inline-formula><mml:math id="M562" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula></title>
      <p id="d1e7800">Given the different simulation domains between the two models, the results
cannot be compared directly to investigate the impact of physical treatment
on inert tracers. However, the model sensitivity of inert tracers at the
surface to the process of dry deposition can be compared between <inline-formula><mml:math id="M563" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>
and <inline-formula><mml:math id="M564" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula> using the sensitivity simulations denoted
<inline-formula><mml:math id="M565" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M566" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> in Table 2.
The impact of dry deposition on DM8A BCT in <inline-formula><mml:math id="M567" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula> is about 50 %
higher than that in <inline-formula><mml:math id="M568" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> except during winter (Table 3). Such large
differences are not surprising given that neither the meteorological inputs
nor the parameterizations are the same for the process of dry deposition
between the two models (Table 1). However, both models show similar
magnitudes in their changes in the relative contributions of inert tracers
at the surface. For both <inline-formula><mml:math id="M569" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M570" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula>, since little change is found
in DM8A <inline-formula><mml:math id="M571" display="inline"><mml:mrow><mml:mtext>BC3</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (less than 0.5 % across the entire US in all seasons),
only the results in DM8A <inline-formula><mml:math id="M572" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> are shown to illustrate the model
sensitivity of the relative contributions of inert tracers at the surface to the
process of dry deposition. For both models, the sensitivity of DM8A <inline-formula><mml:math id="M573" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula>
is in general small (Table 4), with a change of less than 5 % in all
seasons across the US. However, the spatial distributions of the change in
DM8A <inline-formula><mml:math id="M574" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> are very different between the two models. The change in DM8A
<inline-formula><mml:math id="M575" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> in <inline-formula><mml:math id="M576" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> (Fig. 3a) shows much more spatial variance
than that in <inline-formula><mml:math id="M577" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula> (Fig. 11), suggesting differences in
the vertical profiles of inert tracers and differences in the process of
turbulent mixing between the two models.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12" specific-use="star"><caption><p id="d1e7987">Differences in the seasonal averaged DM8A <inline-formula><mml:math id="M578" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> (%) between
<inline-formula><mml:math id="M579" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM_noddry</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M580" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M581" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM_noddry</mml:mtext></mml:mrow></mml:math></inline-formula>
minus <inline-formula><mml:math id="M582" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula>). The areas in white or grey are the grid cells that are out
of the simulation domain of <inline-formula><mml:math id="M583" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>DEHM</mml:mtext></mml:mrow></mml:math></inline-formula>.</p></caption>
          <?xmltex \igopts{width=\textwidth}?><graphic xlink:href="https://acp.copernicus.org/articles/18/17157/2018/acp-18-17157-2018-f11.pdf"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <title>Summary and discussion</title>
      <p id="d1e8076">This study investigated the impact of physical treatment in CTMs on lateral
boundary (LB) ozone reaching the surface across the US with the
implementation of inert tracers for LB ozone. The differences in inert
tracers at the surface between different models are attributed to model
differences at the process level.</p>
      <p id="d1e8079">The analysis focused on intercomparing three models with each other, namely
<inline-formula><mml:math id="M584" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M585" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M586" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>. <inline-formula><mml:math id="M587" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M588" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> share the same
meteorological inputs, but the physical processes that inert tracers
undergo (other than 3-D advection) are represented differently. On the other
hand, the <inline-formula><mml:math id="M589" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M590" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> simulations are driven by different
meteorological fields but share the same CTM. The model differences in DM8A
BCT between <inline-formula><mml:math id="M591" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M592" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> are usually found to be much smaller
than those between <inline-formula><mml:math id="M593" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M594" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> across the US in all seasons. The
results indicate that the uncertainty stemming from physical treatment
in CTMs may compete or exceed the uncertainty from meteorological inputs,
especially when nudging is applied to constrain the synoptic-scale
meteorology above the PBL. Furthermore, the model differences in inert
tracers are investigated at the process level. Different vertical
resolutions and discretizations are used by the three models, leading to
differences in the attributions of LB ozone to BC1, BC2, and BC3. The impact
of vertical grid structure on DM8A BCT at the surface is usually small
(within 1 <inline-formula><mml:math id="M595" display="inline"><mml:mi mathvariant="normal">ppb</mml:mi></mml:math></inline-formula>) across the US, but not negligible regionally with the
seasonal averaged changes in DM8A BCT exceeding 1 ppb. At the same time, the
vertical grid structure significantly modifies the relative contributions of
inert tracers at the surface. These findings suggest a need for finer
vertical resolution in both the free troposphere and the lower stratosphere
to better represent the impact of the intercontinental transport of ozone and
ozone intrusion on ozone levels at the surface. Dry deposition strongly
affects the DM8A BCT at the surface in all seasons. However, its impact on
the relative contributions of inert tracers is usually small even when the
process is represented by different parameterization and driven by different
meteorology. Sub-grid cloud mixing is found to be important in the western
coastal US during winter, spring, and fall. In summer, its impact extends
to the majority of the US with a significant impact on both DM8A BCT and the
relative contributions of inert tracers at the surface. Wet scavenging is
found to have little impact on the inert tracers at the surface.</p>
      <p id="d1e8223">Our analysis also indicates that there are significant differences in
vertical turbulent mixing among the three models. Both <inline-formula><mml:math id="M596" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M597" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> are very likely to have stronger vertical mixing than
<inline-formula><mml:math id="M598" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, with the same meteorology driving the turbulent mixing but
represented by different parameterization in <inline-formula><mml:math id="M599" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M600" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, and with
different meteorology<?pagebreak page17173?> driving the turbulent vertical mixing but represented
by the same parameterization method in <inline-formula><mml:math id="M601" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M602" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>. As to the
relative contributions of inert tracers at the surface, in winter, spring,
and fall, when the impact of other processes (especially the sub-grid cloud
mixing) on the relative contributions of inert tracers is weak, the
differences in DM8A <inline-formula><mml:math id="M603" display="inline"><mml:mrow><mml:mtext>BC1</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> and DM8A <inline-formula><mml:math id="M604" display="inline"><mml:mrow><mml:mtext>BC2</mml:mtext><mml:mo>/</mml:mo><mml:mtext>BCT</mml:mtext></mml:mrow></mml:math></inline-formula> between <inline-formula><mml:math id="M605" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M606" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> are within 5 % across the majority of the US regions and
5 %–10 % in the remaining regions; the differences
between <inline-formula><mml:math id="M607" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M608" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula> are larger than 5 % in
the majority of the US regions. The results indicate that the differences
in vertical turbulent mixing between <inline-formula><mml:math id="M609" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M610" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ_27aL</mml:mtext></mml:mrow></mml:math></inline-formula>
could also be greater than the differences between <inline-formula><mml:math id="M611" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M612" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>. As to the DM8A BCT at the surface, the process of dry deposition
often interacts with vertical mixing in determining the inert tracers at
the surface. For example, in summer, for <inline-formula><mml:math id="M613" display="inline"><mml:mrow><mml:mtext>COSMO-CLM</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M614" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, the
impact of different dry deposition on inert tracers at the surface is almost
compensated for by the opposite impact of the model difference in vertical
turbulent mixing on inert tracers over the subregions WB and NB;
for <inline-formula><mml:math id="M615" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M616" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CMAQ</mml:mtext></mml:mrow></mml:math></inline-formula>, a larger difference in DM8A BCT is noted in regions
where dry deposition in <inline-formula><mml:math id="M617" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> is weaker so that the difference in the
simulated BCT due to vertical mixing is further enlarged.</p>
      <p id="d1e8493">The intercomparison of inert tracers simulated by different models also
suggests that when similar estimates of the impact of lateral boundary ozone
are found between different simulations, the results do not necessarily
imply that agreement has been reached for the same reason, unless a
careful comparison is performed at the process level to rule out the
possibility of canceling process contributions. To carry out such analysis,
process analysis (PA) (Jeffries and Tonnesen, 1994) is desirable for all
simulations involved. Unfortunately, the PA tool is either not available or
it was not invoked in the simulation, since PA was not a standard design
protocol for AQMEII3. We recommend that future model intercomparison studies
include the PA tool as a standard protocol to enable consistent
process-level comparison. Additionally, given the important role that
turbulent mixing and sub-grid cloud mixing can play in determining the inert
tracers at the surface, aloft data would be extremely valuable in
understanding the model difference and similarity in these processes. Therefore,
future model intercomparison studies should consider more detailed and
standard archiving of 3-D model information.</p>
</sec>

      
      </body>
    <back><notes notes-type="codedataavailability">

      <p id="d1e8501">CMAQv5.0.2 was used as a CTM in the WRF/CMAQ base simulation, its
sensitivity simulations, and COSMO-CLM/CMAQ. Source code for version 5.0.2 of the
CMAQ modeling system can be downloaded from <uri>https://github.com/USEPA/CMAQ/tree/5.0.2</uri>, last access: 3 October 2018 (US EPA Office of Research and Development, 2014).
For further information, please visit the US Environmental
Protection Agency website for the CMAQ system: <uri>https://www.epa.gov/cmaq</uri>, last access:
1 November 2018.
Data used to generate figures and tables shown in this article can be downloaded at
<uri>https://edg.epa.gov/metadata/catalog/main/home.page</uri>,
last access: 1 November 2018. The re-gridded model data at the
surface and aloft over the
analysis domain and the raw model outputs are available upon request from the corresponding
author.</p>
  </notes><notes notes-type="authorcontribution">

      <p id="d1e8516">PL and CH designed the study. PL, CH, UI, JHC, JB, and UN performed the
simulations. PL, CH, RM, SR, and TS regularly met to discuss research progress and suggest
analysis methods. PL conducted the data analysis and prepared the figures and tables.
PL wrote the paper with comments from all coauthors.</p>
  </notes><notes notes-type="competinginterests">

      <p id="d1e8522">The authors declare that they have no conflict of
interest.</p>
  </notes><notes notes-type="disclaimer">

      <p id="d1e8528">The
views expressed in this article are those of the authors and do not
necessarily represent the views or policies of the US Environmental
Protection Agency.</p>
  </notes><notes notes-type="sistatement">

      <p id="d1e8534">This article is part of the special issue “Global and regional assessment
of intercontinental transport of air pollution: results from HTAP, AQMEII and MICS”. It is not associated with a
conference.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e8540">We gratefully acknowledge the Air Quality Model Evaluation International
Initiative (AQMEII) for facilitating the analysis described in the
paper by designing and coordinating internally consistent
regional-scale air quality model simulations. During the conducting of this
work, Peng Liu held National Research Council postdoctoral fellowships.  Aarhus University gratefully acknowledges the 604
NordicWelfAir project funded by the NordForsk's Nordic Programme on Health
and Welfare 605 (grant agreement no. 75007), the REEEM project funded by the
H2020-LCE Research and 606 Innovation Action (grant agreement no. 691739),
and the Danish Centre for Environment 607 and Energy (AU-DCE). The
simulation of <inline-formula><mml:math id="M618" display="inline"><mml:mrow><mml:mtext>WRF</mml:mtext><mml:mo>/</mml:mo><mml:mtext>CAMx</mml:mtext></mml:mrow></mml:math></inline-formula> was supported by the Coordinating Research Council
Atmospheric Impacts Committee.<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: Stefano Galmarini <?xmltex \hack{\newline}?>
Reviewed by: two anonymous referees</p></ack><ref-list>
    <title>References</title>

      <ref id="bib1.bib1"><label>1</label><mixed-citation>
Baker, K. R., Emery, C., Dolwick, P., and Yarwood, G.: Photochemical grid model
estimates of lateral boundary contributions to ozone and particulate matter
across the continental United States, Atmos.
Environ., 123, 49–62, 2015.</mixed-citation></ref>
      <ref id="bib1.bib2"><label>2</label><mixed-citation>
Christensen, J. H.: The Danish Eulerian Hemispheric Model – a
three-dimensional air pollution model used for the Arctic, Atmos.
Environ., 31, 4169–4191, 1997.</mixed-citation></ref>
      <ref id="bib1.bib3"><label>3</label><mixed-citation>
Cooper, O. R., Gao, R. S., Tarasick, D., Leblanc, T., and Sweeney, C.: Long-term
ozone trends at rural ozone monitoring sites across the United States,
1990–2010, J. Geophys. Res.-Atmos., 117, 1984–2012, 2012.</mixed-citation></ref>
      <ref id="bib1.bib4"><label>4</label><mixed-citation>
Dolwick, P., Akhtar, F., Baker, K. R., Possiel, N., Simon, H., and Tonnesen,
G.: Comparison of background ozone estimates over the western United States
based on two separate model methodologies, Atmos. Environ., 109,
282–296, 2015.</mixed-citation></ref>
      <ref id="bib1.bib5"><label>5</label><mixed-citation>Doms, G., Föerstner, J., Heise, E., Herzog, H.-J., Mironov, D.,
Raschendorfer, M., Reinhardt, T., Ritter, B., Schrodin, R., Schulz, J.-P.,
and Vogel, G.: A Description of the Nonhydrostatic Regional COSMO Model Part
II: Physical Parameterization, German weather service, Offenbach, Germany, available at:
<uri>http://www.cosmo-model.org/content/model/documentation/core/cosmoPhysParamtr.pdf</uri> (last access: 3 October 2018),
2011.</mixed-citation></ref>
      <ref id="bib1.bib6"><label>6</label><mixed-citation>Dunker, A. M., Koo, B., and Yarwood, G.: Contributions of foreign, domestic and
natural emissions to US ozone estimated using the path-integral method in CAMx
nested within GEOS-Chem, Atmos. Chem. Phys., 17, 12553–12571, <ext-link xlink:href="https://doi.org/10.5194/acp-17-12553-2017" ext-link-type="DOI">10.5194/acp-17-12553-2017</ext-link>, 2017.</mixed-citation></ref>
      <ref id="bib1.bib7"><label>7</label><mixed-citation>Eastham, S. D. and Jacob, D. J.: Limits on the ability of global Eulerian models to
resolve intercontinental transport of chemical plumes, Atmos. Chem. Phys., 17, 2543–2553, <ext-link xlink:href="https://doi.org/10.5194/acp-17-2543-2017" ext-link-type="DOI">10.5194/acp-17-2543-2017</ext-link>, 2017.</mixed-citation></ref>
      <ref id="bib1.bib8"><label>8</label><mixed-citation>Federal Register: US Environmental Protection Agency, National Ambient Air
Quality Standards for Ozone – Final Rule, Federal Register 80, available
at: <uri>https://www.gpo.gov/fdsys/pkg/FR-2015-10-26/pdf/2015-26594.pdf</uri> (last access: 3 October 2018), 2015.</mixed-citation></ref>
      <ref id="bib1.bib9"><label>9</label><mixed-citation>Flemming, J., Huijnen, V., Arteta, J., Bechtold, P., Beljaars, A., Blechschmidt, A.-M.,
Diamantakis, M., Engelen, R. J., Gaudel, A., Inness, A., Jones, L., Josse, B.,
Katragkou, E., Marecal, V., Peuch, V.-H., Richter, A., Schultz, M. G., Stein, O.,
and Tsikerdekis, A.: Tropospheric chemistry in the Integrated Forecasting
System of ECMWF, Geosci. Model Dev., 8, 975–1003, <ext-link xlink:href="https://doi.org/10.5194/gmd-8-975-2015" ext-link-type="DOI">10.5194/gmd-8-975-2015</ext-link>, 2015.</mixed-citation></ref>
      <ref id="bib1.bib10"><label>10</label><mixed-citation>Galmarini, S., Koffi, B., Solazzo, E., Keating, T., Hogrefe, C., Schulz, M.,
Benedictow, A., Griesfeller, J. J., Janssens-Maenhout, G., Carmichael, G., Fu, J.,
and Dentener, F.: Technical note: Coordination and harmonization of the multi-scale,
multi-model activities HTAP2, AQMEII3, and MICS-Asia3: simulations, emission
inventories, boundary conditions, and model output formats, Atmos. Chem. Phys., 17, 1543–1555, <ext-link xlink:href="https://doi.org/10.5194/acp-17-1543-2017" ext-link-type="DOI">10.5194/acp-17-1543-2017</ext-link>, 2017.</mixed-citation></ref>
      <ref id="bib1.bib11"><label>11</label><mixed-citation>Gratz, L. E., Jaffe, D. A., and Hee, J. R.: Causes of increasing ozone and
decreasing carbon monoxide in springtime at the Mt. Bachelor Observatory
from 2004 to 2013, Atmos. Environ., 109, 323–330, <ext-link xlink:href="https://doi.org/10.1016/j.atmosenv.2014.05.076" ext-link-type="DOI">10.1016/j.atmosenv.2014.05.076</ext-link>, 2015.</mixed-citation></ref>
      <ref id="bib1.bib12"><label>12</label><mixed-citation>Hogrefe, C., Liu, P., Pouliot, G., Mathur, R., Roselle, S., Flemming, J., Lin, M.,
and Park, R. J.: Impacts of different characterizations of large-scale background
on simulated regional-scale ozone over the continental United
States, Atmos. Chem. Phys., 18, 3839–3864, <ext-link xlink:href="https://doi.org/10.5194/acp-18-3839-2018" ext-link-type="DOI">10.5194/acp-18-3839-2018</ext-link>, 2018.</mixed-citation></ref>
      <ref id="bib1.bib13"><label>13</label><mixed-citation>
Jeffries, H. E. and Tonnesen, S. A.: comparison of two photochemical
reation mechanisms using mass balance and process analysis, Atmos.
Environ.,28, 2991–3003, 1994.</mixed-citation></ref>
      <ref id="bib1.bib14"><label>14</label><mixed-citation>
Karl, T. R. and Koss, W. J.: Regional and National Monthly, Seasonal, and
Annual Temperature Weighted by Area, 1895–1983, Historical Climatology
Series 4-3, National Climatic Data Center, Asheville, NC, 38, 1984.</mixed-citation></ref>
      <ref id="bib1.bib15"><label>15</label><mixed-citation>Kwok, R. H. F., Baker, K. R., Napelenok, S. L., and Tonnesen, G. S.: Photochemical
grid model implementation and application of VOC, <inline-formula><mml:math id="M619" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M620" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
source apportionment, Geosci. Model Dev., 8, 99–114, <ext-link xlink:href="https://doi.org/10.5194/gmd-8-99-2015" ext-link-type="DOI">10.5194/gmd-8-99-2015</ext-link>, 2015.</mixed-citation></ref>
      <ref id="bib1.bib16"><label>16</label><mixed-citation>
Langford, A. O., Senff, C. J., Alvarez II, R. J., Cooper, O. R., Holloway,
J. S., Lin, M. Y., Marchbanks, R. D., Pierce, R. B., Sandberg, S. P.,
Weickmann, A. M., and Williams, E. J.: An overview of the 2013 Las Vegas
Ozone Study (LVOS): Impact of stratospheric intrusions and long-range
transport on surface air quality, Atmos. Environ., 109, 305–322, 2015.</mixed-citation></ref>
      <ref id="bib1.bib17"><label>17</label><mixed-citation>
Langford, A. O., Alvarez II, R. J., Brioude, J., Fine, R., Gustin, M. S.,
Lin, M. Y., Marchbanks, R. D., Pierce, R. B., Sandberg, S. P., Senff, C. J.,
Weickmann, A. M., and Williams, E. J.: Entrainment of stratospheric air and
Asian pollution by the convective boundary layer in the southwestern US,
J. Geophys. Res.-Atmos., 122, 1312–1337, 2017.</mixed-citation></ref>
      <ref id="bib1.bib18"><label>18</label><mixed-citation>Lin, M., Fiore, A. M., Horowitz, L. W., Cooper, O. R., Naik, V., Holloway,
J., Johnson, B. J., Middlebrook, A. M., Oltmans, S. J., Pollack, I. B.,
Ryerson, T. B., Warner, J. X., Wiedinmyer, C., Wilson, J., and Wyman, B.: Transport of Asian ozone pollution into surface air over the western
United States in spring, J. Geophys. Res., 117, D00V07, <ext-link xlink:href="https://doi.org/10.1029/2011JD016961" ext-link-type="DOI">10.1029/2011JD016961</ext-link>, 2012.</mixed-citation></ref>
      <?pagebreak page17175?><ref id="bib1.bib19"><label>19</label><mixed-citation>Lin, M., Horowitz, L. W., Payton, R., Fiore, A. M., and Tonnesen, G.: US surface ozone
trends and extremes from 1980 to 2014: quantifying the roles of rising Asian
emissions, domestic controls, wildfires, and climate, Atmos. Chem. Phys., 17, 2943–2970, <ext-link xlink:href="https://doi.org/10.5194/acp-17-2943-2017" ext-link-type="DOI">10.5194/acp-17-2943-2017</ext-link>, 2017.</mixed-citation></ref>
      <ref id="bib1.bib20"><label>20</label><mixed-citation>Mathur, R., Xing, J., Gilliam, R., Sarwar, G., Hogrefe, C., Pleim, J., Pouliot, G.,
Roselle, S., Spero, T. L., Wong, D. C., and Young, J.: Extending the Community Multiscale
Air Quality (CMAQ) modeling system to hemispheric scales: overview of process
considerations and initial applications, Atmos. Chem. Phys., 17, 12449–12474, <ext-link xlink:href="https://doi.org/10.5194/acp-17-12449-2017" ext-link-type="DOI">10.5194/acp-17-12449-2017</ext-link>, 2017.</mixed-citation></ref>
      <ref id="bib1.bib21"><label>21</label><mixed-citation>
Nopmongcol, U., Jung, J., Kumar, N., and Yarwood, G.: Changes in US
background ozone due to global anthropogenic emissions from 1970 to 2020,
Atmos. Environ., 140, 446–455, 2016.</mixed-citation></ref>
      <ref id="bib1.bib22"><label>22</label><mixed-citation>Nopmongcol, U., Liu, Z., Stoeckenius, T., and Yarwood, G.: Modeling intercontinental
transport of ozone in North America with CAMx for the Air Quality Model Evaluation
International Initiative (AQMEII) Phase 3, Atmos. Chem. Phys., 17, 9931–9943, <ext-link xlink:href="https://doi.org/10.5194/acp-17-9931-2017" ext-link-type="DOI">10.5194/acp-17-9931-2017</ext-link>, 2017.</mixed-citation></ref>
      <ref id="bib1.bib23"><label>23</label><mixed-citation>
Pleim, J. E.: A combined local and nonlocal closure model for the
atmospheric boundary layer. Part I: model description and testing, J. Appl.
Meteorol. Clim., 46, 1383–1395, 2007.</mixed-citation></ref>
      <ref id="bib1.bib24"><label>24</label><mixed-citation>
Pleim, J. and Ran, L.: Surface Flux Modelling for Air Quality Applications,
Atmosphere, 2, 271–302, 2011.</mixed-citation></ref>
      <ref id="bib1.bib25"><label>25</label><mixed-citation>Ramboll: User's Guide to the Comprehensive Air quality Model with extensions
(CAMx), available at:
<uri>http://www.camx.com/files/camxusersguide_v6-50.pdf</uri>, last access: 3 October 2018.</mixed-citation></ref>
      <ref id="bib1.bib26"><label>26</label><mixed-citation>Russell, A. and Dennis, R.: NARSTO critical review of photochemical models
and modelling, Atmos. Environ., 34, 2234–2283, 2000.
 </mixed-citation></ref><?xmltex \hack{\newpage}?>
      <ref id="bib1.bib27"><label>27</label><mixed-citation>
Simpson, D., Fagerli, H., Jonson, J. E., Tsyro, S., Wind, P., and Tuovinen,
J.-P.: Transboundary Acidification, Eutrophication and Ground Level Ozone in
Europe, PART I, Unified EMEP Model Description,  104, 2003.</mixed-citation></ref>
      <ref id="bib1.bib28"><label>28</label><mixed-citation>Solazzo, E., Bianconi, R., Hogrefe, C., Curci, G., Tuccella, P., Alyuz, U., Balzarini, A.,
Baró, R., Bellasio, R., Bieser, J., Brandt, J., Christensen, J. H., Colette, A.,
Francis, X., Fraser, A., Vivanco, M. G., Jiménez-Guerrero, P., Im, U., Manders, A.,
Nopmongcol, U., Kitwiroon, N., Pirovano, G., Pozzoli, L., Prank, M., Sokhi, R. S.,
Unal, A., Yarwood, G., and Galmarini, S.: Evaluation and error apportionment of
an ensemble of atmospheric chemistry transport modeling systems: multivariable
temporal and spatial breakdown, Atmos. Chem. Phys., 17, 3001–3054, <ext-link xlink:href="https://doi.org/10.5194/acp-17-3001-2017" ext-link-type="DOI">10.5194/acp-17-3001-2017</ext-link>, 2017.</mixed-citation></ref>
      <ref id="bib1.bib29"><label>29</label><mixed-citation>US EPA Office of Research and Development: CMAQv5.0.2 (Version 5.0.2),
Zenodo, <ext-link xlink:href="https://doi.org/10.5281/zenodo.1079898" ext-link-type="DOI">10.5281/zenodo.1079898</ext-link>, 30 May 2014.</mixed-citation></ref>
      <ref id="bib1.bib30"><label>30</label><mixed-citation>Zhang, L., Brook, J. R., and Vet, R.: A revised parameterization for gaseous dry
deposition in air-quality models, Atmos. Chem. Phys., 3, 2067–2082, <ext-link xlink:href="https://doi.org/10.5194/acp-3-2067-2003" ext-link-type="DOI">10.5194/acp-3-2067-2003</ext-link>, 2003.</mixed-citation></ref>
      <ref id="bib1.bib31"><label>31</label><mixed-citation>Zhang, L., Jacob, D. J., Downey, N. V., Wood, D. A., Blewitt, D., Carouge, C.
C., van Donkelaar, A., Jones, D. B., Murray, L. T., and Wang, Y.: Improved
estimate of the policy-relevant background ozone in the United States using
the GEOS-Chem global model with <inline-formula><mml:math id="M621" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mo>×</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>
horizontal resolution over North America, Atmos. Environ. 45, 6769–6776,
2011.</mixed-citation></ref>
      <ref id="bib1.bib32"><label>32</label><mixed-citation>
Zhang, Y., Seigneur, C., Bocquet, M., Mallet, V., and Baklanov, A.:
Real-Time Air Quality Forecasting, Part II: State of the Science, Current
Research Needs, and Future Prospects, Atmos. Environ., 60, 656–676, 2012.</mixed-citation></ref>

  </ref-list></back>
    <!--<article-title-html>Attributing differences in the fate of lateral boundary ozone in AQMEII3 models to physical process representations</article-title-html>
<abstract-html><p>Increasing emphasis has been placed on characterizing the contributions and
the uncertainties of ozone imported from outside the US. In chemical
transport models (CTMs), the ozone transported through lateral boundaries
(referred to as LB ozone hereafter) undergoes a series of physical and
chemical processes in CTMs, which are important sources of the uncertainty in
estimating the impact of LB ozone on ozone levels at the surface. By
implementing inert tracers for LB ozone, the study seeks to better understand
how differing representations of physical processes in regional CTMs may lead
to differences in the simulated LB ozone that eventually reaches the surface
across the US. For all the simulations in this study (including WRF∕CMAQ,
WRF∕CAMx, COSMO-CLM∕CMAQ, and WRF∕DEHM), three chemically inert tracers
that generally represent the altitude ranges of the planetary boundary layer
(BC1), free troposphere (BC2), and upper troposphere–lower stratosphere
(BC3) are tracked to assess the simulated impact of LB specification.</p><p>Comparing WRF∕CAMx with WRF∕CMAQ, their differences in vertical grid
structure explain 10&thinsp;%–60&thinsp;% of their seasonally averaged differences in
inert tracers at the surface. Vertical turbulent mixing is the primary
contributor to the remaining differences in inert tracers across the US in
all seasons. Stronger vertical mixing in WRF∕CAMx brings more BC2 downward,
leading to higher BCT (BCT = BC1 + BC2 + BC3) and BC2∕BCT at the surface in
WRF∕CAMx. Meanwhile, the differences in inert tracers due to vertical mixing
are partially counteracted by their difference in sub-grid cloud mixing over
the southeastern US and the Gulf Coast region during summer. The process
of dry deposition adds extra gradients to the spatial distribution of the
differences in DM8A BCT by 5–10&thinsp;ppb during winter and summer.</p><p>COSMO-CLM∕CMAQ and WRF∕CMAQ show similar performance in inert tracers both
at the surface and aloft through most seasons, which suggests similarity
between the two models at process level. The largest difference is found in
summer. Sub-grid cloud mixing plays a primary role in their differences in
inert tracers over the southeastern US and the oceans in summer. Our
analysis of the vertical profiles of inert tracers also suggests that the
model differences in dry deposition over certain regions are offset by the
model differences in vertical turbulent mixing, leading to small differences
in inert tracers at the surface in these regions.</p></abstract-html>
<ref-html id="bib1.bib1"><label>1</label><mixed-citation>
Baker, K. R., Emery, C., Dolwick, P., and Yarwood, G.: Photochemical grid model
estimates of lateral boundary contributions to ozone and particulate matter
across the continental United States, Atmos.
Environ., 123, 49–62, 2015.
</mixed-citation></ref-html>
<ref-html id="bib1.bib2"><label>2</label><mixed-citation>
Christensen, J. H.: The Danish Eulerian Hemispheric Model – a
three-dimensional air pollution model used for the Arctic, Atmos.
Environ., 31, 4169–4191, 1997.
</mixed-citation></ref-html>
<ref-html id="bib1.bib3"><label>3</label><mixed-citation>
Cooper, O. R., Gao, R. S., Tarasick, D., Leblanc, T., and Sweeney, C.: Long-term
ozone trends at rural ozone monitoring sites across the United States,
1990–2010, J. Geophys. Res.-Atmos., 117, 1984–2012, 2012.
</mixed-citation></ref-html>
<ref-html id="bib1.bib4"><label>4</label><mixed-citation>
Dolwick, P., Akhtar, F., Baker, K. R., Possiel, N., Simon, H., and Tonnesen,
G.: Comparison of background ozone estimates over the western United States
based on two separate model methodologies, Atmos. Environ., 109,
282–296, 2015.
</mixed-citation></ref-html>
<ref-html id="bib1.bib5"><label>5</label><mixed-citation>
Doms, G., Föerstner, J., Heise, E., Herzog, H.-J., Mironov, D.,
Raschendorfer, M., Reinhardt, T., Ritter, B., Schrodin, R., Schulz, J.-P.,
and Vogel, G.: A Description of the Nonhydrostatic Regional COSMO Model Part
II: Physical Parameterization, German weather service, Offenbach, Germany, available at:
<a href="http://www.cosmo-model.org/content/model/documentation/core/cosmoPhysParamtr.pdf" target="_blank">http://www.cosmo-model.org/content/model/documentation/core/cosmoPhysParamtr.pdf</a> (last access: 3 October 2018),
2011.
</mixed-citation></ref-html>
<ref-html id="bib1.bib6"><label>6</label><mixed-citation>
Dunker, A. M., Koo, B., and Yarwood, G.: Contributions of foreign, domestic and
natural emissions to US ozone estimated using the path-integral method in CAMx
nested within GEOS-Chem, Atmos. Chem. Phys., 17, 12553–12571, <a href="https://doi.org/10.5194/acp-17-12553-2017" target="_blank">https://doi.org/10.5194/acp-17-12553-2017</a>, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib7"><label>7</label><mixed-citation>
Eastham, S. D. and Jacob, D. J.: Limits on the ability of global Eulerian models to
resolve intercontinental transport of chemical plumes, Atmos. Chem. Phys., 17, 2543–2553, <a href="https://doi.org/10.5194/acp-17-2543-2017" target="_blank">https://doi.org/10.5194/acp-17-2543-2017</a>, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib8"><label>8</label><mixed-citation>
Federal Register: US Environmental Protection Agency, National Ambient Air
Quality Standards for Ozone – Final Rule, Federal Register 80, available
at: <a href="https://www.gpo.gov/fdsys/pkg/FR-2015-10-26/pdf/2015-26594.pdf" target="_blank">https://www.gpo.gov/fdsys/pkg/FR-2015-10-26/pdf/2015-26594.pdf</a> (last access: 3 October 2018), 2015.
</mixed-citation></ref-html>
<ref-html id="bib1.bib9"><label>9</label><mixed-citation>
Flemming, J., Huijnen, V., Arteta, J., Bechtold, P., Beljaars, A., Blechschmidt, A.-M.,
Diamantakis, M., Engelen, R. J., Gaudel, A., Inness, A., Jones, L., Josse, B.,
Katragkou, E., Marecal, V., Peuch, V.-H., Richter, A., Schultz, M. G., Stein, O.,
and Tsikerdekis, A.: Tropospheric chemistry in the Integrated Forecasting
System of ECMWF, Geosci. Model Dev., 8, 975–1003, <a href="https://doi.org/10.5194/gmd-8-975-2015" target="_blank">https://doi.org/10.5194/gmd-8-975-2015</a>, 2015.
</mixed-citation></ref-html>
<ref-html id="bib1.bib10"><label>10</label><mixed-citation>
Galmarini, S., Koffi, B., Solazzo, E., Keating, T., Hogrefe, C., Schulz, M.,
Benedictow, A., Griesfeller, J. J., Janssens-Maenhout, G., Carmichael, G., Fu, J.,
and Dentener, F.: Technical note: Coordination and harmonization of the multi-scale,
multi-model activities HTAP2, AQMEII3, and MICS-Asia3: simulations, emission
inventories, boundary conditions, and model output formats, Atmos. Chem. Phys., 17, 1543–1555, <a href="https://doi.org/10.5194/acp-17-1543-2017" target="_blank">https://doi.org/10.5194/acp-17-1543-2017</a>, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib11"><label>11</label><mixed-citation>
Gratz, L. E., Jaffe, D. A., and Hee, J. R.: Causes of increasing ozone and
decreasing carbon monoxide in springtime at the Mt. Bachelor Observatory
from 2004 to 2013, Atmos. Environ., 109, 323–330, <a href="https://doi.org/10.1016/j.atmosenv.2014.05.076" target="_blank">https://doi.org/10.1016/j.atmosenv.2014.05.076</a>, 2015.
</mixed-citation></ref-html>
<ref-html id="bib1.bib12"><label>12</label><mixed-citation>
Hogrefe, C., Liu, P., Pouliot, G., Mathur, R., Roselle, S., Flemming, J., Lin, M.,
and Park, R. J.: Impacts of different characterizations of large-scale background
on simulated regional-scale ozone over the continental United
States, Atmos. Chem. Phys., 18, 3839–3864, <a href="https://doi.org/10.5194/acp-18-3839-2018" target="_blank">https://doi.org/10.5194/acp-18-3839-2018</a>, 2018.
</mixed-citation></ref-html>
<ref-html id="bib1.bib13"><label>13</label><mixed-citation>
Jeffries, H. E. and Tonnesen, S. A.: comparison of two photochemical
reation mechanisms using mass balance and process analysis, Atmos.
Environ.,28, 2991–3003, 1994.
</mixed-citation></ref-html>
<ref-html id="bib1.bib14"><label>14</label><mixed-citation>
Karl, T. R. and Koss, W. J.: Regional and National Monthly, Seasonal, and
Annual Temperature Weighted by Area, 1895–1983, Historical Climatology
Series 4-3, National Climatic Data Center, Asheville, NC, 38, 1984.
</mixed-citation></ref-html>
<ref-html id="bib1.bib15"><label>15</label><mixed-citation>
Kwok, R. H. F., Baker, K. R., Napelenok, S. L., and Tonnesen, G. S.: Photochemical
grid model implementation and application of VOC, NO<sub><i>x</i></sub>, and O<sub>3</sub>
source apportionment, Geosci. Model Dev., 8, 99–114, <a href="https://doi.org/10.5194/gmd-8-99-2015" target="_blank">https://doi.org/10.5194/gmd-8-99-2015</a>, 2015.
</mixed-citation></ref-html>
<ref-html id="bib1.bib16"><label>16</label><mixed-citation>
Langford, A. O., Senff, C. J., Alvarez II, R. J., Cooper, O. R., Holloway,
J. S., Lin, M. Y., Marchbanks, R. D., Pierce, R. B., Sandberg, S. P.,
Weickmann, A. M., and Williams, E. J.: An overview of the 2013 Las Vegas
Ozone Study (LVOS): Impact of stratospheric intrusions and long-range
transport on surface air quality, Atmos. Environ., 109, 305–322, 2015.
</mixed-citation></ref-html>
<ref-html id="bib1.bib17"><label>17</label><mixed-citation>
Langford, A. O., Alvarez II, R. J., Brioude, J., Fine, R., Gustin, M. S.,
Lin, M. Y., Marchbanks, R. D., Pierce, R. B., Sandberg, S. P., Senff, C. J.,
Weickmann, A. M., and Williams, E. J.: Entrainment of stratospheric air and
Asian pollution by the convective boundary layer in the southwestern US,
J. Geophys. Res.-Atmos., 122, 1312–1337, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib18"><label>18</label><mixed-citation>
Lin, M., Fiore, A. M., Horowitz, L. W., Cooper, O. R., Naik, V., Holloway,
J., Johnson, B. J., Middlebrook, A. M., Oltmans, S. J., Pollack, I. B.,
Ryerson, T. B., Warner, J. X., Wiedinmyer, C., Wilson, J., and Wyman, B.: Transport of Asian ozone pollution into surface air over the western
United States in spring, J. Geophys. Res., 117, D00V07, <a href="https://doi.org/10.1029/2011JD016961" target="_blank">https://doi.org/10.1029/2011JD016961</a>, 2012.
</mixed-citation></ref-html>
<ref-html id="bib1.bib19"><label>19</label><mixed-citation>
Lin, M., Horowitz, L. W., Payton, R., Fiore, A. M., and Tonnesen, G.: US surface ozone
trends and extremes from 1980 to 2014: quantifying the roles of rising Asian
emissions, domestic controls, wildfires, and climate, Atmos. Chem. Phys., 17, 2943–2970, <a href="https://doi.org/10.5194/acp-17-2943-2017" target="_blank">https://doi.org/10.5194/acp-17-2943-2017</a>, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib20"><label>20</label><mixed-citation>
Mathur, R., Xing, J., Gilliam, R., Sarwar, G., Hogrefe, C., Pleim, J., Pouliot, G.,
Roselle, S., Spero, T. L., Wong, D. C., and Young, J.: Extending the Community Multiscale
Air Quality (CMAQ) modeling system to hemispheric scales: overview of process
considerations and initial applications, Atmos. Chem. Phys., 17, 12449–12474, <a href="https://doi.org/10.5194/acp-17-12449-2017" target="_blank">https://doi.org/10.5194/acp-17-12449-2017</a>, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib21"><label>21</label><mixed-citation>
Nopmongcol, U., Jung, J., Kumar, N., and Yarwood, G.: Changes in US
background ozone due to global anthropogenic emissions from 1970 to 2020,
Atmos. Environ., 140, 446–455, 2016.
</mixed-citation></ref-html>
<ref-html id="bib1.bib22"><label>22</label><mixed-citation>
Nopmongcol, U., Liu, Z., Stoeckenius, T., and Yarwood, G.: Modeling intercontinental
transport of ozone in North America with CAMx for the Air Quality Model Evaluation
International Initiative (AQMEII) Phase 3, Atmos. Chem. Phys., 17, 9931–9943, <a href="https://doi.org/10.5194/acp-17-9931-2017" target="_blank">https://doi.org/10.5194/acp-17-9931-2017</a>, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib23"><label>23</label><mixed-citation>
Pleim, J. E.: A combined local and nonlocal closure model for the
atmospheric boundary layer. Part I: model description and testing, J. Appl.
Meteorol. Clim., 46, 1383–1395, 2007.
</mixed-citation></ref-html>
<ref-html id="bib1.bib24"><label>24</label><mixed-citation>
Pleim, J. and Ran, L.: Surface Flux Modelling for Air Quality Applications,
Atmosphere, 2, 271–302, 2011.
</mixed-citation></ref-html>
<ref-html id="bib1.bib25"><label>25</label><mixed-citation>
Ramboll: User's Guide to the Comprehensive Air quality Model with extensions
(CAMx), available at:
<a href="http://www.camx.com/files/camxusersguide_v6-50.pdf" target="_blank">http://www.camx.com/files/camxusersguide_v6-50.pdf</a>, last access: 3 October 2018.
</mixed-citation></ref-html>
<ref-html id="bib1.bib26"><label>26</label><mixed-citation>
Russell, A. and Dennis, R.: NARSTO critical review of photochemical models
and modelling, Atmos. Environ., 34, 2234–2283, 2000.

</mixed-citation></ref-html>
<ref-html id="bib1.bib27"><label>27</label><mixed-citation>
Simpson, D., Fagerli, H., Jonson, J. E., Tsyro, S., Wind, P., and Tuovinen,
J.-P.: Transboundary Acidification, Eutrophication and Ground Level Ozone in
Europe, PART I, Unified EMEP Model Description,  104, 2003.
</mixed-citation></ref-html>
<ref-html id="bib1.bib28"><label>28</label><mixed-citation>
Solazzo, E., Bianconi, R., Hogrefe, C., Curci, G., Tuccella, P., Alyuz, U., Balzarini, A.,
Baró, R., Bellasio, R., Bieser, J., Brandt, J., Christensen, J. H., Colette, A.,
Francis, X., Fraser, A., Vivanco, M. G., Jiménez-Guerrero, P., Im, U., Manders, A.,
Nopmongcol, U., Kitwiroon, N., Pirovano, G., Pozzoli, L., Prank, M., Sokhi, R. S.,
Unal, A., Yarwood, G., and Galmarini, S.: Evaluation and error apportionment of
an ensemble of atmospheric chemistry transport modeling systems: multivariable
temporal and spatial breakdown, Atmos. Chem. Phys., 17, 3001–3054, <a href="https://doi.org/10.5194/acp-17-3001-2017" target="_blank">https://doi.org/10.5194/acp-17-3001-2017</a>, 2017.
</mixed-citation></ref-html>
<ref-html id="bib1.bib29"><label>29</label><mixed-citation>
US EPA Office of Research and Development: CMAQv5.0.2 (Version 5.0.2),
Zenodo, <a href="https://doi.org/10.5281/zenodo.1079898" target="_blank">https://doi.org/10.5281/zenodo.1079898</a>, 30 May 2014.
</mixed-citation></ref-html>
<ref-html id="bib1.bib30"><label>30</label><mixed-citation>
Zhang, L., Brook, J. R., and Vet, R.: A revised parameterization for gaseous dry
deposition in air-quality models, Atmos. Chem. Phys., 3, 2067–2082, <a href="https://doi.org/10.5194/acp-3-2067-2003" target="_blank">https://doi.org/10.5194/acp-3-2067-2003</a>, 2003.
</mixed-citation></ref-html>
<ref-html id="bib1.bib31"><label>31</label><mixed-citation>
Zhang, L., Jacob, D. J., Downey, N. V., Wood, D. A., Blewitt, D., Carouge, C.
C., van Donkelaar, A., Jones, D. B., Murray, L. T., and Wang, Y.: Improved
estimate of the policy-relevant background ozone in the United States using
the GEOS-Chem global model with 1∕2° × 2∕3°
horizontal resolution over North America, Atmos. Environ. 45, 6769–6776,
2011.
</mixed-citation></ref-html>
<ref-html id="bib1.bib32"><label>32</label><mixed-citation>
Zhang, Y., Seigneur, C., Bocquet, M., Mallet, V., and Baklanov, A.:
Real-Time Air Quality Forecasting, Part II: State of the Science, Current
Research Needs, and Future Prospects, Atmos. Environ., 60, 656–676, 2012.
</mixed-citation></ref-html>--></article>
