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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ACP</journal-id><journal-title-group>
    <journal-title>Atmospheric Chemistry and Physics</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1680-7324</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-18-10773-2018</article-id><title-group><article-title>Aircraft observations of the chemical composition and aging of aerosol in
the Manaus urban plume during GoAmazon 2014/5</article-title><alt-title>Aircraft observations of the chemical composition and aging of aerosol</alt-title>
      </title-group><?xmltex \runningtitle{Aircraft observations of the chemical composition and aging of aerosol}?><?xmltex \runningauthor{J. E. Shilling et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Shilling</surname><given-names>John E.</given-names></name>
          <email>john.shilling@pnnl.gov</email>
        <ext-link>https://orcid.org/0000-0002-3728-0195</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Pekour</surname><given-names>Mikhail S.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9821-0078</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Fortner</surname><given-names>Edward C.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Artaxo</surname><given-names>Paulo</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7754-3036</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>de Sá</surname><given-names>Suzane</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Hubbe</surname><given-names>John M.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Longo</surname><given-names>Karla M.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Machado</surname><given-names>Luiz A. T.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-8243-1706</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4 aff7">
          <name><surname>Martin</surname><given-names>Scot T.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff8">
          <name><surname>Springston</surname><given-names>Stephen R.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0159-4931</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Tomlinson</surname><given-names>Jason</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-0734-3298</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff8">
          <name><surname>Wang</surname><given-names>Jian</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-2815-4170</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Atmospheric Sciences and Global Change Division, Pacific Northwest National Laboratory, Richland, Washington, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Center for Aerosol and Cloud Chemistry, Aerodyne Research, Billerica, Massachusetts, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Institute of Physics, University of Sao Paulo, Sao Paulo, Brazil</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, Massachusetts, USA</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>University Space Research Association/Goddard Earth Sciences Technology and Research (USRA/GESTAR), National Aeronautics and Space Administration, Goddard Space Flight Center, Columbia, Maryland, USA</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Centro de Previsao de Tempo e Estudos Climaticos – Instituto Nacional de Pesquisas Espaciais, Sao Jose dos Campos, Brazil</institution>
        </aff>
        <aff id="aff7"><label>7</label><institution>Department of Earth and Planetary Sciences, Harvard University, Cambridge, Massachusetts, USA</institution>
        </aff>
        <aff id="aff8"><label>8</label><institution>Environmental and Climate Sciences Department, Brookhaven National Laboratory, Upton, New York, USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">John E. Shilling (john.shilling@pnnl.gov)</corresp></author-notes><pub-date><day>30</day><month>July</month><year>2018</year></pub-date>
      
      <volume>18</volume>
      <issue>14</issue>
      <fpage>10773</fpage><lpage>10797</lpage>
      <history>
        <date date-type="received"><day>21</day><month>February</month><year>2018</year></date>
           <date date-type="rev-request"><day>6</day><month>March</month><year>2018</year></date>
           <date date-type="rev-recd"><day>26</day><month>June</month><year>2018</year></date>
           <date date-type="accepted"><day>12</day><month>July</month><year>2018</year></date>
      </history>
      <permissions>
        
        
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://acp.copernicus.org/articles/.html">This article is available from https://acp.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://acp.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/.pdf</self-uri>
      <abstract>
    <p id="d1e229">The Green Ocean Amazon (GoAmazon 2014/5) campaign, conducted from
January 2014 to December 2015 in the vicinity of Manaus, Brazil, was designed
to study the aerosol life cycle and aerosol–cloud interactions in both
pristine and anthropogenically influenced conditions. As part of this
campaign, the U.S. Department of Energy (DOE) Gulfstream 1 (G-1) research aircraft was
deployed from 17 February to 25 March  2014 (wet season) and 6 September to
5 October 2014 (dry season) to investigate aerosol and cloud properties
aloft. Here, we present results from the G-1 deployments focusing on
measurements of the aerosol chemical composition and secondary organic
aerosol (SOA) formation and aging.</p>
    <p id="d1e232">In the first portion of the paper, we provide an overview of the data
and compare and contrast the data from the wet and dry season. Organic aerosol (OA) dominates the deployment-averaged chemical composition,
comprising 80 % of the non-refractory PM<inline-formula><mml:math id="M1" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:math></inline-formula> aerosol mass, with sulfate
comprising 14 %, nitrate 2 %, and ammonium 4 %. This product
distribution was unchanged between seasons, despite the fact that total
aerosol loading was significantly higher in the dry season and that regional
and local biomass burning was a significant source of OA mass in the dry,
but not wet, season. However, the OA was more oxidized in the dry season,
with the median of the mean carbon oxidation state increasing from <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.45</mml:mn></mml:mrow></mml:math></inline-formula> in
the wet season to <inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.02</mml:mn></mml:mrow></mml:math></inline-formula> in the dry season.</p>
    <?pagebreak page10774?><p id="d1e264">In the second portion of the paper, we discuss the evolution of the
Manaus plume, focusing on 13 March 2014, one of the exemplary days in the
wet season. On this flight, we observe a clear increase in OA concentrations
in the Manaus plume relative to the background. As the plume is transported
downwind and ages, we observe dynamic changes in the OA. The mean carbon
oxidation state of the OA increases from <inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.45</mml:mn></mml:mrow></mml:math></inline-formula> during the 4–5 h
of photochemical aging. Hydrocarbon-like organic aerosol (HOA) mass is lost,
with <inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">HOA</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values
decreasing from 17.6 <inline-formula><mml:math id="M7" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M9" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> over Manaus to 10.6 <inline-formula><mml:math id="M10" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M11" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M12" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> 95 km downwind.
Loss of HOA is balanced out by formation of oxygenated organic aerosol (OOA),
with <inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OOA</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> increasing from 9.2 to 23.1 <inline-formula><mml:math id="M14" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M15" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M16" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.
Because hydrocarbon-like organic aerosol (HOA) loss is balanced by OOA formation, we observe
little change in the net <inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values;
<inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> averages 31 <inline-formula><mml:math id="M19" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M20" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M21" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and does not
increase with aging. Analysis of the Manaus plume evolution using data from
two additional flights in the wet season showed similar trends in <inline-formula><mml:math id="M22" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>
to the 13 March  flight; <inline-formula><mml:math id="M23" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values
averaged 34 <inline-formula><mml:math id="M24" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M25" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M26" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and showed little change over
4–6.5 h of aging. Our observation of constant <inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>
are in contrast to literature studies of the outflow of several North
American cities, which report significant increases in
<inline-formula><mml:math id="M28" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> for the first day of plume aging. These observations suggest that SOA
formation in the Manaus plume occurs, at least in part, by a different
mechanism than observed in urban outflow plumes in most other literature
studies. Constant <inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> with plume aging has been
observed in many biomass burning plumes, but we are unaware of reports of
fresh urban emissions aging in this manner. These observations show that
urban pollution emitted from Manaus in the wet season forms less particulate
downwind as it ages than urban pollution emitted from North American cities.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e608">Aerosol particles have important impacts on visibility, human health, and the
Earth's energy balance and water cycle. The impact of aerosol particles on
radiation balance, in particular their impact on cloud properties and
lifetimes, continues to be a significant source of uncertainty for global
climate models (IPCC, 2013). An extensive series of field studies has shown
that a large fraction of the total non-refractory aerosol mass is organic
aerosol (OA) and that a large fraction of this OA mass forms in the
atmosphere when organic compounds in the gas phase are oxidized and
subsequently condense as secondary organic aerosol (SOA) (Zhang et al., 2007;
Jimenez et al., 2009). Because SOA is such a large fraction of the aerosol
mass, condensation of SOA is critical to growing nucleation-mode particles,
which are initially too small to serve as cloud condensation nuclei (CCN), to
sizes that are capable of forming cloud droplets (Ehn et al., 2014; Riipinen
et al., 2011; Pierce et al., 2012), though a recent study showed that unique
conditions in the Amazon allowed particles smaller than 50 nm to act as CCN
during Green Ocean Amazon campaign (GoAmazon 2014/5; Fan et al., 2018). Thus,
accurate descriptions of SOA condensation and aerosol growth kinetics are
crucial to accurately predicting aerosol size distributions and therefore CCN
number concentrations and aerosol optical properties, both of which are
required for accurately predicting the impact of aerosols on climate (Scott
et al., 2015; Riipinen et al., 2012; Zaveri et al., 2014).</p>
      <p id="d1e611">For several years, there has been an interest in studying the Lagrangian
(i.e., within the same air parcel) evolution of organic aerosol from the
emissions of urban centers. Field studies have investigated the evolution of
pollution plumes by arranging fixed observation sites at different distances
downwind of a city along the direction of the prevailing wind or by tracking
the plume with a mobile platform, such as an aircraft. Larger campaigns may
employ both strategies. Most studies of this type are best described as
pseudo-Lagrangian as repeatedly sampling the same air parcel is difficult
with mobile platforms and impossible with fixed sites. Dilution and mixing of
the air parcel with background air also alter the plume composition. To
account for atmospheric dilution and spatial and temporal variability in
emissions, studies often utilize the ratio of excess OA to that of an inert
tracer as a metric for evaluating OA formation in a plume (Kleinman et al.,
2008; Sullivan and Weber, 2006; Takegawa et al., 2006; de Gouw et al., 2005).
CO is a common choice for the inert tracer because it is emitted during
combustion and other anthropogenic processes, is significantly enhanced in
urban plumes relative to the background, and is routinely and robustly
measured. Measurements of <inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> in aged
urban outflow have spanned a range from
47 <inline-formula><mml:math id="M31" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M32" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M33" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the NE USA (de Gouw et al., 2008)
to 62–80 <inline-formula><mml:math id="M34" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M35" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M36" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in Mexico City (DeCarlo et al.,
2008; Kleinman et al., 2008) to 100 <inline-formula><mml:math id="M37" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M38" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M39" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in
the Po Valley, Italy (Crosier et al., 2007), to
44–197 <inline-formula><mml:math id="M40" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M41" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M42" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in Sacramento, CA (Shilling et
al., 2013; Setyan et al., 2012), to
97–133 <inline-formula><mml:math id="M43" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M44" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M45" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in Paris (Freney et al., 2014).
The same studies have found that <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>
increases roughly linearly with air mass age for the first 1 day of aging and
levels off after approximately 2 days (de Gouw and Jimenez, 2009; DeCarlo et
al., 2010; Kleinman et al., 2008; Takegawa et al., 2006; Sullivan et al.,
2006; Freney et al., 2014). Observations suggest that changes in <inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> begin soon after emission. For example,
measurements during the MILAGRO campaign showed that <inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> increased from
10–35 <inline-formula><mml:math id="M49" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M50" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M51" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for fresh emissions to
70–80 <inline-formula><mml:math id="M52" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M53" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M54" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> after approximately 1 day of
photochemical aging (DeCarlo et al., 2010; Kleinman et al., 2008). Changes of
similar magnitude over similar aging times have been measured in the urban
outflow of Tokyo (Takegawa et al., 2006), the SE USA (Sullivan et al., 2006),
Paris (Freney et al., 2014), and the NE USA (de Gouw et al., 2005).</p>
      <p id="d1e903">Measurements have also suggested that organic aerosol production may be
enhanced when urban emissions interact with biogenic emissions. Organic
aerosol concentrations have shown strong correlation with CO and other
tracers of anthropogenic emissions (de Gouw et al., 2005; Volkamer et al.,
2006; Weber et al., 2007; Sullivan et al., 2006). Furthermore, satellite
observations suggest that the spatial and seasonal patterns of aerosol
optical depth coincide with biogenic emissions (Goldstein et al., 2009). At the same
time, radiocarbon dating has shown that a large fraction of the carbon in
the aerosol phase is modern and that the modern carbon fraction
increases with increasing distance from urban centers (Weber et al., 2007; Schichtel
et al., 2008). During the CARES campaign near Sacramento, CA, aircraft
observations showed that <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> measurements were 35–44 <inline-formula><mml:math id="M56" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M57" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M58" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> when anthropogenic emissions evolved in the
absence of strong biogenic emissions and 77–157 <inline-formula><mml:math id="M59" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M60" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M61" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> when the urban plume interacted with regions of strong biogenic emissions
(Shilling et al., 2013). Measurements from a ground site during CARES
report average <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values of 36 <inline-formula><mml:math id="M63" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M64" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M65" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the Sacramento plume during periods of low biogenic emissions
and 97 <inline-formula><mml:math id="M66" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M67" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> during periods of high biogenic<?pagebreak page10775?> emissions
(Setyan et al., 2012). Several additional field studies report
enhancements of SOA through interactions of anthropogenic and biogenic
emissions but may not employ the <inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> metric (Zhou
et al., 2016; Xu et al., 2015; Ng et al., 2017; Bean et al., 2016). The
potential mechanisms responsible for these enhancements are known in some
cases but remain uncertain in others and have been outlined in recent review
articles (Shrivastava et al., 2017; Ng et al., 2017; Glasius and Goldstein,
2016; Hoyle et al., 2011).</p>
      <p id="d1e1083">To date, most studies of the evolution of urban plumes have been conducted in
the Northern Hemisphere. Far fewer studies have been performed in the
Southern Hemisphere, where there is less landmass, population is lower, and
therefore background concentrations of anthropogenic pollutants are lower
(Andreae, 2007). The Amazon tropical forest, in particular, is an important
ecosystem in which background levels of anthropogenic pollution may sometimes
reach levels characteristic of pre-industrial conditions but is becoming
increasingly impacted by industrialization and anthropogenic pollution
(Martin et al., 2017, 2010b; Andreae et al., 2015). Fuzzi et al. (2007)
described chemical analysis of filter samples collected in Rondônia, Brazil
(<inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">825</mml:mn></mml:mrow></mml:math></inline-formula> km SW of Manaus, Brazil), from September to November 2002. They
found that water-soluble organic species were the main contributors to
submicron particles (90 %), with the balance consisting of soluble
inorganic ions (Fuzzi et al., 2007). Allan et
al. (2014) discuss measurements from flights investigating biogenic processes
during the South American Biomass Burning Analysis (SAMBBA) aircraft
campaign, based out of Rondônia, Brazil. They report that concentrations of
SOA derived from isoprene epoxydiols (IEPOX) were highest in the presence of
acidic seed, low <inline-formula><mml:math id="M71" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> concentrations, and high relative humidity (RH; Allan et
al., 2014). The AMAZE-08 campaign was conducted in February and March of
2008, and Chen et al. (2009, 2015) reported on chemical composition measurements
made with an Aerodyne High-Resolution Time-of-Flight Aerosol Mass Spectrometer
located at a tower site 60 km NNW of Manaus, Brazil (Martin
et al., 2010a; Chen et al., 2009, 2015). They found that organics accounted
for more than 80 % of the non-refractory aerosol mass, with the organic
mass often dominated by SOA, and that the aerosol was acidic in composition
(Chen et al., 2015). It is important to note that Chen et al. (2009, 2015)
excluded data impacted by Manaus emissions from their analysis. De Sá et
al. (2017) investigated the production of IEPOX SOA downwind of Manus during
GoAmazon2014/5 and found decreased concentrations of IEPOX SOA in the plume
relative to the background, which they attribute to suppression of IEPOX
formation by elevated NO concentrations in the plume. Kuhn et al. (2010)
describe aircraft-based aerosol measurements in the Manaus plume as it was
transported downwind. They report increases in <inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CCN</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> as the plume aged, which they attribute to condensation of both
organic and inorganic mass, but did not measure the aerosol chemical
composition (Kuhn et al., 2010). Additional aircraft campaigns conducted in
the Amazon have often focused on biomass burning and the impact of biomass burning
aerosol on cloud properties (Morgan et al., 2013; Yokelson et al., 2007;
Andreae et al., 2012).</p>
      <p id="d1e1126">GoAmazon 2014/5 was conducted in the
vicinity of Manaus, Brazil, from January 2014 to December 2015. The goal of
GoAmazon 2014/5 was to investigate the interaction of Manaus urban emissions
with the surrounding pristine Amazon Basin and the subsequent impact of
these emission on cloud formation and properties (Martin et al.,
2017, 2016). Manaus's geography makes it ideal for this
mission. Manaus, an industrial city with a metropolitan population of
more than 2 million people, is the largest city in the Amazon Basin. The
prevailing wind is from the east, with the nearest major upwind city, Belem,
approximately 1250 km away. The surrounding tropical forest emits vast
quantities of biogenic gases and aerosol. Few roads connect Manaus to the
rest of Brazil, and most freight and traffic from outside the city are via
ship or plane. Thus, Manaus acts as a large point source of anthropogenic
emissions which are transported to the surrounding Amazon Basin. As part of
this campaign, the DOE Gulfstream 1 (G-1) research aircraft conducted two
6-week-long missions in which it investigated the evolution of the Manaus
plume as it was transported into the surrounding Amazon tropical rain forest.
The timing of these flight missions was chosen to provide a contrast between
the wet and dry season (Martin et al., 2016). In the wet season,
back-trajectory analysis indicated that the Manaus region was typically under the
influence of air originating from the North Atlantic Ocean (Martin et
al., 2016). Regular, organized mesoscale convective systems triggered by sea
breeze circulation brought widespread, moderate-rate precipitation to the
region (Giangrande et al., 2017; Machado et al., 2018; Burleyson et al.,
2016). The high level of rainfall and moisture in the wet season inhibited
biomass burning, and a low number of fires were observed (Martin et al.,
2016; Machado et al., 2018). Under these conditions, the Amazon Basin is one
of the cleanest continental regions on Earth, onto which the Manaus plume
represents a significant perturbation (Martin et al., 2010b; Artaxo et
al., 2013). In the dry season, back-trajectory analysis indicates that air masses
originate from the Southern Hemisphere and travel up the Amazon River,
transporting pollution from the northern coastal cities (Martin et al.,
2016). In addition, recirculation events transported air from the southern
Amazon Basin into the Manaus region (Martin et al., 2016). Intense
biomass burning fires in the central and southern portion of the Amazon
Basin and in central Africa were observed in the dry season, and a portion of
these emissions were transported to the Manaus region (Martin et al.,
2016, 2010b; Artaxo et al., 2013). In the dry season, more
intense but less frequent convection produced approximately one quarter of
the total rainfall observed in the wet season (Machado et
al., 2018). As a result of the combination of<?pagebreak page10776?> transport and precipitation
frequency, the Manaus region is significantly more polluted in the dry season.</p>
      <p id="d1e1129">In this paper we report on measurements from instruments deployed on
the G-1, focusing primarily on measurements of aerosol species and trace
gases that impact the aerosol life cycle. In the first part of the
paper, we provide an overview of aerosol and volatile organic
carbon (VOC) measurements and
compare and contrast the wet- and dry-season data. In the second portion of
the paper, we examine, in detail, the first 4–6.5 h of
photochemical aging of the Manaus plume as it is transported into the
surrounding tropical forest and interacts with biogenic emissions.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p id="d1e1135">Flight times, altitudes of level legs, and meteorological parameters
measured by instrumentation on board the G-1 aircraft for research flights
described in this paper. Temperature, RH, wind speed, and wind heading
correspond to values measured shortly after takeoff at altitudes less than
1000 m. Note that meteorological parameters are not homogeneous in space or
time. Date format: month/day/year.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.97}[.97]?><oasis:tgroup cols="8">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="left"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Flight date<inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">Takeoff<inline-formula><mml:math id="M81" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">Landing<inline-formula><mml:math id="M82" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">Altitude(s) of level flight legs</oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M83" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">RH</oasis:entry>
         <oasis:entry colname="col7">Wind speed</oasis:entry>
         <oasis:entry colname="col8">Wind</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">(m)<inline-formula><mml:math id="M84" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">(<inline-formula><mml:math id="M85" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C)<inline-formula><mml:math id="M86" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">d</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col6">(% water)<inline-formula><mml:math id="M87" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">d</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col7">(m s<inline-formula><mml:math id="M88" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)<inline-formula><mml:math id="M89" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">d</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col8">heading<inline-formula><mml:math id="M90" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">d</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col7">Wet season </oasis:entry>
         <oasis:entry colname="col8"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2/22/2014</oasis:entry>
         <oasis:entry colname="col2">10:37:11</oasis:entry>
         <oasis:entry colname="col3">13:25:28</oasis:entry>
         <oasis:entry colname="col4">600, 1600</oasis:entry>
         <oasis:entry colname="col5">25</oasis:entry>
         <oasis:entry colname="col6">80</oasis:entry>
         <oasis:entry colname="col7">5</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">2/25/2014</oasis:entry>
         <oasis:entry colname="col2">12:30:31</oasis:entry>
         <oasis:entry colname="col3">14:43:04</oasis:entry>
         <oasis:entry colname="col4">600, 1300</oasis:entry>
         <oasis:entry colname="col5">26</oasis:entry>
         <oasis:entry colname="col6">80</oasis:entry>
         <oasis:entry colname="col7">8</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/1/2014 a</oasis:entry>
         <oasis:entry colname="col2">9:33:09</oasis:entry>
         <oasis:entry colname="col3">11:31:31</oasis:entry>
         <oasis:entry colname="col4">600</oasis:entry>
         <oasis:entry colname="col5">25</oasis:entry>
         <oasis:entry colname="col6">80</oasis:entry>
         <oasis:entry colname="col7">6</oasis:entry>
         <oasis:entry colname="col8">NE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/1/2014 b</oasis:entry>
         <oasis:entry colname="col2">13:13:59</oasis:entry>
         <oasis:entry colname="col3">14:49:34</oasis:entry>
         <oasis:entry colname="col4">1100, 4500, 6400</oasis:entry>
         <oasis:entry colname="col5">24</oasis:entry>
         <oasis:entry colname="col6">80</oasis:entry>
         <oasis:entry colname="col7">4</oasis:entry>
         <oasis:entry colname="col8">NE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/3/2014</oasis:entry>
         <oasis:entry colname="col2">13:46:34</oasis:entry>
         <oasis:entry colname="col3">15:11:57</oasis:entry>
         <oasis:entry colname="col4">600</oasis:entry>
         <oasis:entry colname="col5">26</oasis:entry>
         <oasis:entry colname="col6">90</oasis:entry>
         <oasis:entry colname="col7">NA</oasis:entry>
         <oasis:entry colname="col8">NA</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/7/2014</oasis:entry>
         <oasis:entry colname="col2">9:08:11</oasis:entry>
         <oasis:entry colname="col3">11:39:18</oasis:entry>
         <oasis:entry colname="col4">600, 1300, 1900, 3200, 3800, 4500, 5800</oasis:entry>
         <oasis:entry colname="col5">26</oasis:entry>
         <oasis:entry colname="col6">65</oasis:entry>
         <oasis:entry colname="col7">10</oasis:entry>
         <oasis:entry colname="col8">NNE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/11/2014</oasis:entry>
         <oasis:entry colname="col2">10:39:59</oasis:entry>
         <oasis:entry colname="col3">13:51:10</oasis:entry>
         <oasis:entry colname="col4">600, 1500</oasis:entry>
         <oasis:entry colname="col5">25</oasis:entry>
         <oasis:entry colname="col6">85</oasis:entry>
         <oasis:entry colname="col7">7</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/12/2014</oasis:entry>
         <oasis:entry colname="col2">13:20:25</oasis:entry>
         <oasis:entry colname="col3">15:29:44</oasis:entry>
         <oasis:entry colname="col4">600</oasis:entry>
         <oasis:entry colname="col5">22</oasis:entry>
         <oasis:entry colname="col6">80</oasis:entry>
         <oasis:entry colname="col7">16</oasis:entry>
         <oasis:entry colname="col8">NE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/13/2014</oasis:entry>
         <oasis:entry colname="col2">10:14:14</oasis:entry>
         <oasis:entry colname="col3">13:21:29</oasis:entry>
         <oasis:entry colname="col4">500, 1100</oasis:entry>
         <oasis:entry colname="col5">25</oasis:entry>
         <oasis:entry colname="col6">80</oasis:entry>
         <oasis:entry colname="col7">7</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/14/2014</oasis:entry>
         <oasis:entry colname="col2">10:17:07</oasis:entry>
         <oasis:entry colname="col3">12:48:25</oasis:entry>
         <oasis:entry colname="col4">500, 1200, 2200, 3200</oasis:entry>
         <oasis:entry colname="col5">25</oasis:entry>
         <oasis:entry colname="col6">80</oasis:entry>
         <oasis:entry colname="col7">8</oasis:entry>
         <oasis:entry colname="col8">E</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/16/2014</oasis:entry>
         <oasis:entry colname="col2">10:38:18</oasis:entry>
         <oasis:entry colname="col3">13:30:33</oasis:entry>
         <oasis:entry colname="col4">500, 1000, 1200, 1600</oasis:entry>
         <oasis:entry colname="col5">25</oasis:entry>
         <oasis:entry colname="col6">80</oasis:entry>
         <oasis:entry colname="col7">5</oasis:entry>
         <oasis:entry colname="col8">E</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/17/2014</oasis:entry>
         <oasis:entry colname="col2">12:23:11</oasis:entry>
         <oasis:entry colname="col3">15:26:38</oasis:entry>
         <oasis:entry colname="col4">600, 1200, 1500</oasis:entry>
         <oasis:entry colname="col5">26</oasis:entry>
         <oasis:entry colname="col6">75</oasis:entry>
         <oasis:entry colname="col7">10</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/19/2014</oasis:entry>
         <oasis:entry colname="col2">10:25:33</oasis:entry>
         <oasis:entry colname="col3">13:21:48</oasis:entry>
         <oasis:entry colname="col4">600, 1600, 3200, 4800, 6500, 7100</oasis:entry>
         <oasis:entry colname="col5">22</oasis:entry>
         <oasis:entry colname="col6">95</oasis:entry>
         <oasis:entry colname="col7">7</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3/21/2014</oasis:entry>
         <oasis:entry colname="col2">12:32:34</oasis:entry>
         <oasis:entry colname="col3">15:00:22</oasis:entry>
         <oasis:entry colname="col4">600, 800, 1300</oasis:entry>
         <oasis:entry colname="col5">23</oasis:entry>
         <oasis:entry colname="col6">90</oasis:entry>
         <oasis:entry colname="col7">6</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">3/23/2014</oasis:entry>
         <oasis:entry colname="col2">10:56:47</oasis:entry>
         <oasis:entry colname="col3">13:46:34</oasis:entry>
         <oasis:entry colname="col4">600</oasis:entry>
         <oasis:entry colname="col5">23</oasis:entry>
         <oasis:entry colname="col6">90</oasis:entry>
         <oasis:entry colname="col7">5</oasis:entry>
         <oasis:entry colname="col8">NNE</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col7">Dry season </oasis:entry>
         <oasis:entry colname="col8"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/6/2014</oasis:entry>
         <oasis:entry colname="col2">11:16:07</oasis:entry>
         <oasis:entry colname="col3">13:39:03</oasis:entry>
         <oasis:entry colname="col4">500, 1700</oasis:entry>
         <oasis:entry colname="col5">29</oasis:entry>
         <oasis:entry colname="col6">NA</oasis:entry>
         <oasis:entry colname="col7">4</oasis:entry>
         <oasis:entry colname="col8">ESE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/9/2014</oasis:entry>
         <oasis:entry colname="col2">11:01:14</oasis:entry>
         <oasis:entry colname="col3">14:11:01</oasis:entry>
         <oasis:entry colname="col4">500, 1600, 1900, 5800</oasis:entry>
         <oasis:entry colname="col5">25</oasis:entry>
         <oasis:entry colname="col6">80</oasis:entry>
         <oasis:entry colname="col7">4</oasis:entry>
         <oasis:entry colname="col8">NE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/11/2014</oasis:entry>
         <oasis:entry colname="col2">10:32:40</oasis:entry>
         <oasis:entry colname="col3">13:37:38</oasis:entry>
         <oasis:entry colname="col4">500</oasis:entry>
         <oasis:entry colname="col5">27</oasis:entry>
         <oasis:entry colname="col6">70</oasis:entry>
         <oasis:entry colname="col7">7</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/12/2014</oasis:entry>
         <oasis:entry colname="col2">10:41:26</oasis:entry>
         <oasis:entry colname="col3">13:08:04</oasis:entry>
         <oasis:entry colname="col4">600, 1600</oasis:entry>
         <oasis:entry colname="col5">25</oasis:entry>
         <oasis:entry colname="col6">65</oasis:entry>
         <oasis:entry colname="col7">6</oasis:entry>
         <oasis:entry colname="col8">E</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/13/2014</oasis:entry>
         <oasis:entry colname="col2">10:50:05</oasis:entry>
         <oasis:entry colname="col3">13:43:21</oasis:entry>
         <oasis:entry colname="col4">500, 800, 1600, 2100, 2600</oasis:entry>
         <oasis:entry colname="col5">27</oasis:entry>
         <oasis:entry colname="col6">70</oasis:entry>
         <oasis:entry colname="col7">5</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/15/2014</oasis:entry>
         <oasis:entry colname="col2">10:59:06</oasis:entry>
         <oasis:entry colname="col3">14:01:47</oasis:entry>
         <oasis:entry colname="col4">500, 1800, 1900, 2600</oasis:entry>
         <oasis:entry colname="col5">28</oasis:entry>
         <oasis:entry colname="col6">60</oasis:entry>
         <oasis:entry colname="col7">5</oasis:entry>
         <oasis:entry colname="col8">E</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/16/2014</oasis:entry>
         <oasis:entry colname="col2">11:40:15</oasis:entry>
         <oasis:entry colname="col3">14:27:54</oasis:entry>
         <oasis:entry colname="col4">500, 1900</oasis:entry>
         <oasis:entry colname="col5">28</oasis:entry>
         <oasis:entry colname="col6">65</oasis:entry>
         <oasis:entry colname="col7">3</oasis:entry>
         <oasis:entry colname="col8">NE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/18/2014</oasis:entry>
         <oasis:entry colname="col2">10:35:59</oasis:entry>
         <oasis:entry colname="col3">13:26:01</oasis:entry>
         <oasis:entry colname="col4">500, 1900, 4900</oasis:entry>
         <oasis:entry colname="col5">27</oasis:entry>
         <oasis:entry colname="col6">70</oasis:entry>
         <oasis:entry colname="col7">2</oasis:entry>
         <oasis:entry colname="col8">E</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/19/2014</oasis:entry>
         <oasis:entry colname="col2">10:30:23</oasis:entry>
         <oasis:entry colname="col3">13:46:44</oasis:entry>
         <oasis:entry colname="col4">500, 1600</oasis:entry>
         <oasis:entry colname="col5">28</oasis:entry>
         <oasis:entry colname="col6">70</oasis:entry>
         <oasis:entry colname="col7">2</oasis:entry>
         <oasis:entry colname="col8">NE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/21/2014</oasis:entry>
         <oasis:entry colname="col2">11:17:32</oasis:entry>
         <oasis:entry colname="col3">14:20:51</oasis:entry>
         <oasis:entry colname="col4">500, 1300, 1600, 1900, 2500, 4800</oasis:entry>
         <oasis:entry colname="col5">26</oasis:entry>
         <oasis:entry colname="col6">70</oasis:entry>
         <oasis:entry colname="col7">5</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/22/2014</oasis:entry>
         <oasis:entry colname="col2">10:23:40</oasis:entry>
         <oasis:entry colname="col3">13:37:40</oasis:entry>
         <oasis:entry colname="col4">500, 1800</oasis:entry>
         <oasis:entry colname="col5">28</oasis:entry>
         <oasis:entry colname="col6">60</oasis:entry>
         <oasis:entry colname="col7">3</oasis:entry>
         <oasis:entry colname="col8">NE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/23/2014</oasis:entry>
         <oasis:entry colname="col2">11:46:45</oasis:entry>
         <oasis:entry colname="col3">14:43:13</oasis:entry>
         <oasis:entry colname="col4">500, 1900</oasis:entry>
         <oasis:entry colname="col5">28</oasis:entry>
         <oasis:entry colname="col6">60</oasis:entry>
         <oasis:entry colname="col7">2</oasis:entry>
         <oasis:entry colname="col8">E</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/25/2014</oasis:entry>
         <oasis:entry colname="col2">13:09:24</oasis:entry>
         <oasis:entry colname="col3">15:53:59</oasis:entry>
         <oasis:entry colname="col4">500, 1600, 1800</oasis:entry>
         <oasis:entry colname="col5">28</oasis:entry>
         <oasis:entry colname="col6">70</oasis:entry>
         <oasis:entry colname="col7">4</oasis:entry>
         <oasis:entry colname="col8">E</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/27/2014</oasis:entry>
         <oasis:entry colname="col2">14:29:21</oasis:entry>
         <oasis:entry colname="col3">16:21:40</oasis:entry>
         <oasis:entry colname="col4">600, 2300</oasis:entry>
         <oasis:entry colname="col5">29</oasis:entry>
         <oasis:entry colname="col6">55</oasis:entry>
         <oasis:entry colname="col7">5</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/28/2014</oasis:entry>
         <oasis:entry colname="col2">11:09:12</oasis:entry>
         <oasis:entry colname="col3">14:07:27</oasis:entry>
         <oasis:entry colname="col4">600, 1800, 2100</oasis:entry>
         <oasis:entry colname="col5">28</oasis:entry>
         <oasis:entry colname="col6">65</oasis:entry>
         <oasis:entry colname="col7">5</oasis:entry>
         <oasis:entry colname="col8">ENE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">9/30/2014</oasis:entry>
         <oasis:entry colname="col2">10:55:10</oasis:entry>
         <oasis:entry colname="col3">13:10:19</oasis:entry>
         <oasis:entry colname="col4">500, 2000, 3200</oasis:entry>
         <oasis:entry colname="col5">29</oasis:entry>
         <oasis:entry colname="col6">55</oasis:entry>
         <oasis:entry colname="col7">3</oasis:entry>
         <oasis:entry colname="col8">E</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">10/1/2014</oasis:entry>
         <oasis:entry colname="col2">10:39:01</oasis:entry>
         <oasis:entry colname="col3">13:09:54</oasis:entry>
         <oasis:entry colname="col4">600, 1000, 1300, 1600, 2100, 2500</oasis:entry>
         <oasis:entry colname="col5">26</oasis:entry>
         <oasis:entry colname="col6">65</oasis:entry>
         <oasis:entry colname="col7">6</oasis:entry>
         <oasis:entry colname="col8">E</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">10/3/2014</oasis:entry>
         <oasis:entry colname="col2">10:50:51</oasis:entry>
         <oasis:entry colname="col3">13:54:57</oasis:entry>
         <oasis:entry colname="col4">800, 1000, 1200, 1600, 1900, 2600, 3300, 3900</oasis:entry>
         <oasis:entry colname="col5">26</oasis:entry>
         <oasis:entry colname="col6">75</oasis:entry>
         <oasis:entry colname="col7">4</oasis:entry>
         <oasis:entry colname="col8">ESE</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">10/4/2014</oasis:entry>
         <oasis:entry colname="col2">12:24:46</oasis:entry>
         <oasis:entry colname="col3">13:52:31</oasis:entry>
         <oasis:entry colname="col4">600</oasis:entry>
         <oasis:entry colname="col5">27</oasis:entry>
         <oasis:entry colname="col6">55</oasis:entry>
         <oasis:entry colname="col7">NA</oasis:entry>
         <oasis:entry colname="col8">NA</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table><table-wrap-foot><p id="d1e1138"><inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> The flight on 10 March 2014 is omitted from this
table due to an AMS failure. <inline-formula><mml:math id="M74" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> Local time. <inline-formula><mml:math id="M75" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula> Altitude
above mean sea level from GPS data; only level flight legs on which AMS<?xmltex \hack{\\}?>data were collected are listed. <inline-formula><mml:math id="M76" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">d</mml:mi></mml:msup></mml:math></inline-formula> Immediately after takeoff, altitude
<inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1000</mml:mn></mml:mrow></mml:math></inline-formula> m, wind speed and heading from Aventech Research AIMMS-20 probe. <?xmltex \hack{\\}?><inline-formula><mml:math id="M78" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> from Rosemount 102E probe, RH calculated from <inline-formula><mml:math id="M79" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, and dew point measured
by General Eastern 1011-B probe.</p></table-wrap-foot></table-wrap>

</sec>
<sec id="Ch1.S2">
  <title>Experimental</title>
<sec id="Ch1.S2.SS1">
  <title>G-1 flight strategy</title>
      <p id="d1e2360">The GoAmazon 2014/5 campaign was conducted in the vicinity of Manaus, Brazil,
from  1 January 2014 through 31 December  2015 (Martin et al., 2016).
During this period, DOE's G-1 research aircraft, based out of the Manaus
International Airport, was deployed for two periods, during which time it
sampled the Manaus urban plume as it was transported downwind over the
Amazon rain forest. The first aircraft deployment period occurred during the
wet season from 15 February to 26 March  2014, while the second occurred in
the dry season from 1 September to 10 October 2014. Sixteen research
flights were conducted in the wet season, and 19 were conducted in the dry
season. Table 1 lists takeoff and landing times, the altitude of level
flight legs, and meteorological parameters measured by the G-1
instrumentation shortly after takeoff on each flight. In general, flight
plans were focused on successive perpendicular plume crossings spaced
approximately equally at intervals of 24 km downwind of the city. A
representative flight path for  13 March 2014, an exemplary day in the wet
season with few clouds, is shown in Fig. 1. The paths for all flights
during the two deployments are shown, segregated by altitude, in Martin et
al. (2016) and therefore are not reproduced here. On 13 March, the first leg
approximately bisected the city along a NW–SE line, the second leg passed
near a highly instrumented ground site directly across the Amazon River from
Manaus (T2), and the fourth leg passed over a second highly instrumented site
located NE of Manacapuru (T3), with an additional leg between the T2 and T3
sites, and a final leg downwind of the T3 site. The first pass through the
pattern was generally at an altitude of 500–700 m above ground level, with a
second pass at a higher altitude and often multiple altitudes and often, though not
always, focused on sampling clouds. The flight pattern discussed above and
shown in Fig. 1 was rotated to align with the prevailing wind direction.
Flights generally departed in the late morning or early afternoon and lasted
between 3 and 3.5 h (Table 1).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><caption><p id="d1e2365">Flight path for the 13 March 2014 flight colored by the CO
concentration in units of ppm. Arrows indicate the direction of the flight. The
first pass through the pattern was conducted at 500 m and then repeated at
1000 m. The G-1 took off at 10:12 LT and landed at 13:21 LT for a total
flight duration of 3 h and 9 min. The white dots show the location of
ground measurement sites. The underlying image is from Google Earth.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/10773/2018/acp-18-10773-2018-f01.pdf"/>

        </fig>

<?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Instrumentation</title>
      <p id="d1e2382">An Aerodyne High-Resolution Time-of-Flight Aerosol Mass Spectrometer
(abbreviated as AMS hereafter) was deployed on the G-1 to measure aerosol
chemical composition (Jayne et al., 2000; DeCarlo et al., 2006). The AMS
operated only in the standard “V” mass spectrometer (MS) mode (the particle sizing mode was
not used) with a 13 s data averaging interval and equal chopper open and
closed periods of 3 s. Before, during, and after flights, the
AMS-sampled air was periodically diverted through a HEPA filter to remove
particulates, and these filter periods were used to account for gas-phase
interferences with isobaric particulate signals. Based on the standard
deviation of these blank measurements (3<inline-formula><mml:math id="M91" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula>) as described in the
literature (DeCarlo et al., 2006), the
detection limits of the AMS at the 13s sampling interval were 0.12, 0.01,
0.014, and 0.005 <inline-formula><mml:math id="M92" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for organics, sulfate, nitrate, and
ammonium, respectively. All aerosol instruments, including the AMS, sampled
from a common, double-diffuser isokinetic inlet. Flow for the AMS was
subsampled from the center of the isokinetic inlet and dried to RH
<inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> % by passage through a <inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> in. ID Perma Pure Nafion membrane. A
constant-pressure inlet operating at approximately 620 hPa was used to
maintain a constant volumetric flow to the AMS up to altitudes of
approximately 3900 m (Bahreini et al., 2008). Because the AMS was powered
off between flights, a correction based on the real-time <inline-formula><mml:math id="M96" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>
signal was applied to all data to account for drifting sensitivity as the
instrument warmed up during flights. The AMS was<?pagebreak page10777?> regularly calibrated in the
field using monodisperse ammonium nitrate particles quantified with a TSI
condensation particle counter (CPC). Data were analyzed in Igor Pro (v6.37)
using the high-resolution analysis package (Squirrel v1.55H, PIKA v1.44H)
and techniques described in the literature (Canagaratna et al.,
2015; Kroll et al., 2011; Aiken et al., 2007; Allan et al., 2003; Jimenez et
al., 2003). All AMS data discussed in this paper have been processed
using the high-resolution data analysis routine. The O : C and H : C values
reported here use the updated calibrations described in Canagaratna et al. (2015). All AMS data are normalized to the laboratory calibration conditions
of 23 <inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and 1013 hPa. Positive matrix factorization (PMF) analysis
was performed on the wet-season data set by combining all flight data into a
single experiment using the PMF Evaluation Tool (v 2.06) and the PFM2
algorithm (v 4.2) (Ulbrich et al., 2009; Paatero, 1997; Paatero and Tapper, 1994).</p>
      <p id="d1e2456">An Ionicon quadrupole high-sensitivity Proton-Transfer-Reaction Mass
Spectrometer (PTR-MS) was used to measure selected gas-phase VOC
concentrations (Lindinger et<?pagebreak page10778?> al., 1998). The PTR-MS was run in
the ion monitoring mode in which signals of a limited number of pre-selected
of <inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula> values are sequentially measured, with one measurement cycle taking
3.5 s. Averaging time at each <inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula> in the series varied depending on the
sensitivity of the instrument to that species, the expected concentration,
and the background, but it was generally between 0.2 and 0.5 s. Isoprene at
<inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">69</mml:mn></mml:mrow></mml:math></inline-formula> was sampled multiple times during the cycle to enable flux analysis
(Gu et al., 2017). Drift tube temperature, pressure, and voltage were held at
60 <inline-formula><mml:math id="M101" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, 2.22 hPa, and 600 V, respectively, resulting in an
electric-field-to-gas-density (<inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:mi>E</mml:mi><mml:mo>/</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula>) ratio of 134 Td (1 Td <inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">17</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> cm<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> V<inline-formula><mml:math id="M105" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M106" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>). The PTR-MS sampled air through a
dedicated forward-facing inlet that consisted of approximately <inline-formula><mml:math id="M107" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">6</mml:mn><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> of
<inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula> in. OD stainless steel followed by approximately <inline-formula><mml:math id="M109" display="inline"><mml:mn mathvariant="normal">46</mml:mn></mml:math></inline-formula> in. of <inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula> in. Teflon
tubing and <inline-formula><mml:math id="M111" display="inline"><mml:mn mathvariant="normal">36</mml:mn></mml:math></inline-formula> in. of <inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">16</mml:mn></mml:mrow></mml:math></inline-formula> in. OD PEEK tubing. The flow through the Teflon
tubing was 600 cc min<inline-formula><mml:math id="M113" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> with 300 cc min<inline-formula><mml:math id="M114" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> subsampled through the PEEK tubing for
introduction into the PTR-MS. To assess the PTR-MS background, air was
periodically diverted through a stainless-steel tube filled with a Shimadzu
platinum catalyst heated to 600 <inline-formula><mml:math id="M115" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, which removes VOCs from the
airstream without perturbing RH. The catalyst efficiency was
tested during the campaign by comparing signal from air containing VOCs
passed through the catalyst with signal from VOC-free air. The PTR-MS was
calibrated by introducing known concentrations of calibration gases into the
instrument with variable dilution by VOC-free air. The calibration tank VOC
concentrations were determined gravimetrically and verified using gas chromatography analysis
by the manufacturer (AiR Environmental, Inc).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><caption><p id="d1e2674">Box-and-whisker representations of the G-1 AMS data for both the wet
and dry seasons <bold>(a)</bold>, average particle chemical composition for each
flight <bold>(b)</bold>, and average aerosol chemical composition for all
flights <bold>(c)</bold>. Boxes represent the quartiles, with whiskers extending
to 10 % and 90 % and the median values shown as dots. Lines between
the boxes connect the median and are drawn to guide the eye. Note the scale
change between the wet- and dry-season box-and-whisker plots. AMS data are
normalized to 23 <inline-formula><mml:math id="M116" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and 1013 hPa.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/10773/2018/acp-18-10773-2018-f02.pdf"/>

        </fig>

      <p id="d1e2701">Ozone was measured with a Thermo Scientific Model 49i ozone analyzer based
on measurement of UV absorption at 254 nm. The instrument was regularly
calibrated in flight by displacement of known quantities of ozone and zeroed
in flight using ozone-scrubbed ambient air. CO was measured using a Los
Gatos Research CO–<inline-formula><mml:math id="M117" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula>–<inline-formula><mml:math id="M118" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi mathvariant="normal">O</mml:mi></mml:mrow></mml:math></inline-formula> analyzer that is based on
cavity-enhanced near-IR absorption and was also calibrated regularly
in flight. Additional information on the instrumentation deployed on the G-1
can be found in the GoAmazon 2014/5 overview (Martin et al.,
2016).</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Results and discussion</title>
<sec id="Ch1.S3.SS1">
  <title>Overview of G-1 aerosol data and comparison of wet and dry
seasons</title>
      <p id="d1e2742">As discussed in the Introduction, the different precipitation and mesoscale
transport patterns in the wet and the dry season are expected to produce
considerably different concentrations of pollutants in the Amazon Basin, and
measurements confirmed this expectation. Figure 2 and Table 2 summarize the
AMS results for data collected on the G-1 flights in both the wet and the
dry season. The top panel of Fig. 2 shows box-and-whisker plots
summarizing AMS data for organic, sulfate, nitrate, and ammonium particulate
concentrations, with one data point representing each flight (note the scale
change between the wet- and dry-season plot). The middle panel shows the
relative distribution of the chemical species on each flight. The bottom
panel shows the distribution of the chemical species as a mass-weighted
average of all data from the respective season. Several trends are readily
apparent in the data. First, it is clear that aerosol loadings were
significantly higher in the dry season than in the wet season. Median
organic loadings for the wet- and dry-season data were 0.85 and
4.29 <inline-formula><mml:math id="M119" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M120" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively. Median sulfate, nitrate, and ammonium loadings
increased from 0.19, 0.02, and 0.06 <inline-formula><mml:math id="M121" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M122" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the wet season to
0.77, 0.05, and 0.25 <inline-formula><mml:math id="M123" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M124" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the dry season. Mean loadings of all
species were somewhat higher than the median. Mean organic, sulfate,
nitrate, and ammonium loadings were 0.91, 0.16, 0.02, and 0.05 <inline-formula><mml:math id="M125" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M126" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the wet season and 4.41, 0.80, 0.1, and 0.26 <inline-formula><mml:math id="M127" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M128" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
in the dry season. In the wet season, the mass loading of all species were
lower than typically observed over continental regions in the Northern
Hemisphere (Zhang et al., 2007).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><caption><p id="d1e2843">Box-and-whisker representations of the G-1 PTR-MS data for both the
wet and dry seasons. Boxes represent the quartiles, with whiskers extending
to 10 % and 90 % and the median values shown as dots. Note the scale
change between the top and bottom panels.</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/10773/2018/acp-18-10773-2018-f03.pdf"/>

        </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2"><caption><p id="d1e2855">Chemically resolved mass loading measured by the AMS on board the
G-1. Mass loadings are normalized to 23 <inline-formula><mml:math id="M129" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and 1013 hPa. Units are
<inline-formula><mml:math id="M130" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M131" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The statistics for altitudes below 700 m approximate
the boundary layer conditions at the time of the flights.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Wet season</oasis:entry>
         <oasis:entry colname="col3">Dry season</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3">Median loading (all data) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Org</oasis:entry>
         <oasis:entry colname="col2">0.85</oasis:entry>
         <oasis:entry colname="col3">4.29</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M132" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.19</oasis:entry>
         <oasis:entry colname="col3">0.77</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M133" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.02</oasis:entry>
         <oasis:entry colname="col3">0.05</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M134" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.06</oasis:entry>
         <oasis:entry colname="col3">0.25</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3">Median loading (altitude <inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">700</mml:mn></mml:mrow></mml:math></inline-formula> m) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Org</oasis:entry>
         <oasis:entry colname="col2">0.89</oasis:entry>
         <oasis:entry colname="col3">4.22</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M136" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.15</oasis:entry>
         <oasis:entry colname="col3">0.7</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M137" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.02</oasis:entry>
         <oasis:entry colname="col3">0.03</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M138" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.04</oasis:entry>
         <oasis:entry colname="col3">0.21</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3">Mean loading (all data) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Org</oasis:entry>
         <oasis:entry colname="col2">0.91</oasis:entry>
         <oasis:entry colname="col3">4.41</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M139" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.16</oasis:entry>
         <oasis:entry colname="col3">0.83</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M140" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.02</oasis:entry>
         <oasis:entry colname="col3">0.1</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M141" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.05</oasis:entry>
         <oasis:entry colname="col3">0.26</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3">Mean loading (altitude <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">700</mml:mn></mml:mrow></mml:math></inline-formula> m) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Org</oasis:entry>
         <oasis:entry colname="col2">1.02</oasis:entry>
         <oasis:entry colname="col3">4.45</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M143" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.18</oasis:entry>
         <oasis:entry colname="col3">0.85</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M144" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.03</oasis:entry>
         <oasis:entry colname="col3">0.05</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M145" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.06</oasis:entry>
         <oasis:entry colname="col3">0.23</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e3262"><?xmltex \hack{\newpage}?>While this paper will focus on the particulate data, measurements of the
volatile organic compounds provide insights into the precursors that are
oxidized to form OA and help to identify the source of an air parcel.
Figure 3 and Table 3 summarize the concentrations of several relevant VOCs
measured on board the G-1 with the PTR-MS. Similar to the trends seen in the
aerosol mass loading data, concentrations of most VOCs measured by the PTR-MS
are significantly higher in the dry season than in the wet season.
Concentrations of isoprene (<inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">69</mml:mn></mml:mrow></mml:math></inline-formula>) and its oxidation products (<inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">71</mml:mn></mml:mrow></mml:math></inline-formula>),
biogenic precursors of OA, are a factor of 2–3 higher in the dry
season than the wet season. The average daily high temperatures in Manaus are
33.5 <inline-formula><mml:math id="M148" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C in September (dry season) and 30.9 <inline-formula><mml:math id="M149" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C in March (wet
season) (INMET, 2018), and isoprene
emissions have been shown to scale with temperature, among other variables
(Guenther et al., 2012). Measurements of benzene (<inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">79</mml:mn></mml:mrow></mml:math></inline-formula>), which is
primarily anthropogenic in origin, were also significantly higher in the dry
season. While benzene itself is unlikely to significantly contribute to SOA
formation over the timescales we observe on the G-1 flights (4–6.5 h) due
to its <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula>-day atmospheric lifetime (Atkinson and Arey, 2003), o<?pagebreak page10780?>ther
unmeasured anthropogenic VOC concentrations which would contribute to more
immediate OA formation may have been higher as well. The higher VOC
concentrations may contribute to the higher OA concentrations measured in the
dry season. However, the PTR-MS data, in addition to satellite and
remote-sensing measurements (Martin et al., 2016), also show that biomass burning
significantly impacted the region. Measurements of acetonitrile (<inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">42</mml:mn></mml:mrow></mml:math></inline-formula>),
whose major source is biomass burning (Yokelson et al., 2009, 2007), are
2–3 times higher in the dry season than the wet season, indicating a
significant biomass burning impact in the region. Biomass burning is a known
source of OA (Jolleys et al., 2012; Bond et al., 2004; Yokelson et al., 2009;
Ferek et al., 1998) and would also contribute to the higher aerosol
concentrations observed in the dry season.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3"><caption><p id="d1e3358">Measurements of VOC species made by the PTR-MS on board the G-1.
Units are ppbv. The statistics for altitudes less than 700 m approximate the
boundary layer conditions at the time of the flights.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Wet</oasis:entry>
         <oasis:entry colname="col3">Dry</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">season</oasis:entry>
         <oasis:entry colname="col3">season</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3">Median concentration (all data) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">42</mml:mn></mml:mrow></mml:math></inline-formula> (acetonitrile)</oasis:entry>
         <oasis:entry colname="col2">0.1</oasis:entry>
         <oasis:entry colname="col3">0.25</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">59</mml:mn></mml:mrow></mml:math></inline-formula> (acetone)</oasis:entry>
         <oasis:entry colname="col2">0.47</oasis:entry>
         <oasis:entry colname="col3">1.46</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">69</mml:mn></mml:mrow></mml:math></inline-formula> (isoprene)</oasis:entry>
         <oasis:entry colname="col2">0.43</oasis:entry>
         <oasis:entry colname="col3">1.09</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">71</mml:mn></mml:mrow></mml:math></inline-formula> (isoprene oxidation products)</oasis:entry>
         <oasis:entry colname="col2">0.66</oasis:entry>
         <oasis:entry colname="col3">1.84</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">79</mml:mn></mml:mrow></mml:math></inline-formula> (benzene)</oasis:entry>
         <oasis:entry colname="col2">0.03</oasis:entry>
         <oasis:entry colname="col3">0.08</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M158" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">137</mml:mn></mml:mrow></mml:math></inline-formula> (monoterpenes)</oasis:entry>
         <oasis:entry colname="col2">0.1</oasis:entry>
         <oasis:entry colname="col3">0.08</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3">Median concentration (<inline-formula><mml:math id="M159" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">700</mml:mn></mml:mrow></mml:math></inline-formula> m) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M160" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">42</mml:mn></mml:mrow></mml:math></inline-formula> (acetonitrile)</oasis:entry>
         <oasis:entry colname="col2">0.09</oasis:entry>
         <oasis:entry colname="col3">0.26</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">59</mml:mn></mml:mrow></mml:math></inline-formula> (acetone)</oasis:entry>
         <oasis:entry colname="col2">0.43</oasis:entry>
         <oasis:entry colname="col3">1.65</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M162" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">69</mml:mn></mml:mrow></mml:math></inline-formula> (isoprene)</oasis:entry>
         <oasis:entry colname="col2">0.52</oasis:entry>
         <oasis:entry colname="col3">1.86</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">71</mml:mn></mml:mrow></mml:math></inline-formula> (isoprene oxidation products)</oasis:entry>
         <oasis:entry colname="col2">0.76</oasis:entry>
         <oasis:entry colname="col3">2.16</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">79</mml:mn></mml:mrow></mml:math></inline-formula> (benzene)</oasis:entry>
         <oasis:entry colname="col2">0.02</oasis:entry>
         <oasis:entry colname="col3">0.09</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">137</mml:mn></mml:mrow></mml:math></inline-formula> (monoterpenes)</oasis:entry>
         <oasis:entry colname="col2">0.12</oasis:entry>
         <oasis:entry colname="col3">0.11</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3">Mean concentration (all data) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">42</mml:mn></mml:mrow></mml:math></inline-formula> (acetonitrile)</oasis:entry>
         <oasis:entry colname="col2">0.12</oasis:entry>
         <oasis:entry colname="col3">0.36</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">59</mml:mn></mml:mrow></mml:math></inline-formula> (acetone)</oasis:entry>
         <oasis:entry colname="col2">0.59</oasis:entry>
         <oasis:entry colname="col3">1.91</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">69</mml:mn></mml:mrow></mml:math></inline-formula> (isoprene)</oasis:entry>
         <oasis:entry colname="col2">0.67</oasis:entry>
         <oasis:entry colname="col3">1.82</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M169" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">71</mml:mn></mml:mrow></mml:math></inline-formula> (isoprene oxidation products)</oasis:entry>
         <oasis:entry colname="col2">0.87</oasis:entry>
         <oasis:entry colname="col3">1.99</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">79</mml:mn></mml:mrow></mml:math></inline-formula> (benzene)</oasis:entry>
         <oasis:entry colname="col2">0.04</oasis:entry>
         <oasis:entry colname="col3">0.1</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"><inline-formula><mml:math id="M171" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">137</mml:mn></mml:mrow></mml:math></inline-formula> (monoterpenes)</oasis:entry>
         <oasis:entry colname="col2">0.12</oasis:entry>
         <oasis:entry colname="col3">0.11</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col3">Mean concentration (<inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">700</mml:mn></mml:mrow></mml:math></inline-formula> m) </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">42</mml:mn></mml:mrow></mml:math></inline-formula> (acetonitrile)</oasis:entry>
         <oasis:entry colname="col2">0.11</oasis:entry>
         <oasis:entry colname="col3">0.4</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">59</mml:mn></mml:mrow></mml:math></inline-formula> (acetone)</oasis:entry>
         <oasis:entry colname="col2">0.7</oasis:entry>
         <oasis:entry colname="col3">2.31</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">69</mml:mn></mml:mrow></mml:math></inline-formula> (isoprene)</oasis:entry>
         <oasis:entry colname="col2">0.82</oasis:entry>
         <oasis:entry colname="col3">2.37</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">71</mml:mn></mml:mrow></mml:math></inline-formula> (isoprene oxidation products)</oasis:entry>
         <oasis:entry colname="col2">1.07</oasis:entry>
         <oasis:entry colname="col3">2.4</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">79</mml:mn></mml:mrow></mml:math></inline-formula> (benzene)</oasis:entry>
         <oasis:entry colname="col2">0.04</oasis:entry>
         <oasis:entry colname="col3">0.11</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">137</mml:mn></mml:mrow></mml:math></inline-formula> (monoterpenes)</oasis:entry>
         <oasis:entry colname="col2">0.15</oasis:entry>
         <oasis:entry colname="col3">0.14</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e4072">The aerosol mass loadings we measure in the dry season are consistent with
aircraft-based AMS measurements made during the SAMBBA campaign at the same
time of year, though several hundred kilometers to the SW in the state of
Rondônia (Allan et al., 2014). Chen et al. (2009)
reported AMS-measured wet-season campaign (7 February to 13 March 2008)
average organic and sulfate loadings of 0.7 and 0.15 <inline-formula><mml:math id="M179" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M180" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
from a ground site that was within the GoAmazon 2014/5 flight domain, though
they excluded data impacted by Manaus emissions from their analysis. When comparing aircraft to ground site data, it is important to
acknowledge differences in the data sets. First, the aircraft samples a
different spatial domain in all three spatial dimensions (latitude,
longitude, and altitude) than a ground site. In addition, the G-1 typically
sampled the boundary layer in the late morning or early afternoon (see
Table 1 for flight times) and thus may have missed peak concentrations of
secondary species. Finally, the goal of the flights was often to sample the
Manaus plume for the first half of each flight and clouds for the second
half. The mean aerosol loadings reported here agree well with those reported
by Chen et al. (2009), considering the inherent differences in data sets
discussed above. We also found good agreement when comparing the G-1-measured
aerosol loadings to those measured at the T3 site when the aircraft passed
overhead and at 500–600 m altitude (de Sá et al., 2018). Our loadings
are at the low end of the range (1–2 <inline-formula><mml:math id="M181" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M182" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) reported from a
ground site in Rondônia, approximately 825 km to the southwest of
Manaus, though those data were more heavily influenced by biomass burning and
relied on a combination of offline techniques to speciate the aerosol (Fuzzi
et al., 2007). To understand potential bias in the data set due to altitude,
we calculated statistics for data collected below 700 m, which captures the
lowest altitude portion of each flight. Giangrande et al. (2017) analyzed
radiosonde data from balloons launched at the T3 site and report average
mixed-layer heights of greater than 1000 m above ground level at 10:00 local
time in both the wet and dry seasons of GoAmazon 2014/5. Thus, the G-1 was
typically sampling in the boundary layer on the lowest flight legs, and the
data collected below 700 m should be representative of boundary layer
conditions. In the wet season, the low-altitude<?pagebreak page10781?> AMS loading statistics are
generally either slightly higher or unchanged relative to the full data set.
In the dry season, the low-altitude AMS loading statistics are either
slightly lower relative or unchanged relative to the full data set, likely
due to transport of biomass burning from the south in elevated layers. Both
the median and mean concentrations of most VOCs measured are slightly higher
for the data at <inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">700</mml:mn></mml:mrow></mml:math></inline-formula> m altitude relative to the full data set (Table 3).
This is the expected behavior for most VOCs measured here as they either are
directly emitted at the surface (e.g., isoprene, benzene, monoterpenes) or
form from oxidation of VOCs emitted at the surface (e.g., isoprene oxidation
products).</p>
      <p id="d1e4123">The fractional contribution of each species to the total loading is nearly
identical when comparing seasons, despite the large differences in aerosol
absolute mass concentrations and the larger influence of biomass burning in
the dry season (Martin et al., 2016). Organics dominate the chemical
composition, comprising 80 % of the total, with sulfate comprising 14 %, nitrate
2 %, and ammonium 4 %, regardless of the season. The relative
distribution of the products changes only modestly among flights (Fig. 2,
middle panel). Organics were the largest fraction of the total aerosol mass
on each flight, varying between 69 and 90 %. Sulfate was the second-largest
fraction of the total mass (6–20 %), and the sum of sulfate and organic
was nearly constant. The fractional contributions of each chemical species
described herein are nearly identical to the previous reports from Chen et
al. (2009, 2015). The aircraft-measured chemical composition is also nearly
identical to that measured at the T3 ground site (de Sá et al.,
2018) during GoAmazon 2014/5. The agreement between the T3 and G-1 product
distributions suggests that the T3 ground site is sampling air that is
representative of the regional air and is not unduly biased by local
emissions, at least in the aggregate.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><caption><p id="d1e4128">Normalized occurrence probability calculated from G-1 HR-AMS
analysis of the organic aerosol during the wet (red) and dry (blue) seasons.
O : C and H : C were binned into 0.05-unit-wide bins, and
<inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="normal">OS</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> data were binned in 0.1-unit-wide bins. O : C
and H : C ratios were calculated using the updated methodology in
Canagaratna et al. (2015). Mean carbon oxidation state is calculated
according to Kroll et al. (2011).</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/10773/2018/acp-18-10773-2018-f04.pdf"/>

        </fig>

      <p id="d1e4152">The observation that the total concentrations of all aerosol components
significantly increase yet remain in the same proportions when comparing
the wet and the dry season is unexpected. The more frequent and widespread
precipitation events in the wet season and the lower concentrations of
precursor VOCs contribute to the lower aerosol concentrations in the wet
season. If the aerosol particles were internally mixed, it would be
reasonable to assume that rainfall would remove aerosol in approximately
equal proportions. However, as discussed previously, aerosol sources are
different between seasons, and there was a much larger biomass burning
influence in the dry season (Martin et al., 2016), which is a known and
significant source of OA (e.g., Jolleys et al., 2012; Bond et al.,
2004; Yokelson et al., 2009; Ferek et al., 1998). Biomass burning was
previously shown to emit particulate sulfate and nitrate directly, as well as
<inline-formula><mml:math id="M185" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, sulfuric acid, and methane sulfonic acid (MSA), precursors of
particulate nitrate and sulfate, but not in the same ratio as OA and its
precursors (Yokelson et al., 2009). Thus, given the significant influence
of biomass burning in the dry season, it is surprising that the chemical
composition of the aerosol does not change.</p>
      <p id="d1e4166">Despite the similarity of the distribution of organic, sulfate, and nitrate in
the aerosol particles between the wet and dry seasons, the chemical
composition of the organic aerosol is quite different between seasons.
Figure 4 shows normalized probability distributions for three metrics of the
organic aerosol composition – the hydrogen-to-carbon ratio (H : C), the
oxygen-to-carbon ratio (O : C), and the mean carbon oxidation state
(<inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="normal">OS</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) – segregated by season. It is clear that
the organic particles are more oxidized in the dry season than the wet
season. The median O : C, H : C, and <inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="normal">OS</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the
dry season were 0.78, 1.58, and <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.02</mml:mn></mml:mrow></mml:math></inline-formula>, respectively, while they were 0.6,
1.65, and <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.45</mml:mn></mml:mrow></mml:math></inline-formula> in the wet season. While the H : C ratios change only
slightly between season, the O : C and <inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="normal">OS</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> both show
significant increases in the dry season. Thus, the aerosol in the dry season
is significantly more aged,<?pagebreak page10782?> consistent with aged biomass burning aerosol
contributing to the organic aerosol mass in the dry season and relatively
fresh, locally generated organic aerosol dominating in the wet season (Martin
et al., 2010b). The probability distributions during the wet season are also
wider than in the dry season. We postulate that small contributions from a
wider range of sources were able to influence the data to a larger degree in
the wet season, when the total organic aerosol concentrations were much
smaller. In contrast, during the dry season, small sources of organic mass
would have a smaller impact on the organic composition due to the significant
biomass burning background.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Evolution of organic aerosol in the Manaus plume</title>
      <p id="d1e4237">Figure 1 shows the flight path on 13 March 2014, which is an
exemplary day for observing the evolution of the Manaus plume in the wet
season. Flight legs were perpendicular to the prevailing wind direction and
spaced approximately 24 km apart at successively increasing distance from
Manaus. The length of the legs was chosen such that measurements (e.g., CO
concentration) returned to near background levels at the ends of the leg.
Due to dispersion of the plume, the length of the legs generally increased
downwind of Manaus, ranging from 56 km close to the city to 80 km downwind
of the T3 site. The pattern was flown first at an altitude of 500 m, with a
second pass at 1000 m overlapping the first. This flight was marked by
mostly sunny skies, with no clouds intercepted by the G-1 at 500 m and only
brief passage through spatially small clouds at 1000 m. There was little
local or regional biomass burning during this time period. Thus, this flight
represents a case with coherent transport of the Manaus plume downwind into
regions of high biogenic emissions with few complicating factors, such as
biomass burning or cloud processing.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p id="d1e4242">Time traces of relevant plume measurements on the 13 March 2014
flight. Note the mass of inorganic species (<inline-formula><mml:math id="M191" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M192" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M193" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NH</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) has been multiplied by a factor of 5 to improve the figure
clarity. PTR-MS signal at <inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">69</mml:mn></mml:mrow></mml:math></inline-formula> corresponds to isoprene; <inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">71</mml:mn></mml:mrow></mml:math></inline-formula>
corresponds to the sum of methyl vinyl ketone (MVK), methacrolein (MACR), and
isoprene hydroxyhydroperoxide (ISOPOOH), all oxidation products of isoprene;
and <inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">79</mml:mn></mml:mrow></mml:math></inline-formula> corresponds to benzene. AMS data are normalized to
23 <inline-formula><mml:math id="M197" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and 1013 hPa.</p></caption>
          <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/10773/2018/acp-18-10773-2018-f05.pdf"/>

        </fig>

      <p id="d1e4339">Figure 5 shows a time series of several important gas- and particle-phase
species for the 13 March 2014 flight. Passage through the Manaus plume is
indicated by clear and significant increases in CO, ozone, and PTR-MS <inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">79</mml:mn></mml:mrow></mml:math></inline-formula>
(benzene) above the background levels. While CO may be produced from the
oxidation of biogenic VOCs (BVOCs; Slowik et<?pagebreak page10783?> al., 2010), the intense peaks are
primarily from urban emissions, given the proximity to Manaus and the
correlation of CO with other known anthropogenic species, such as ozone,
benzene, and toluene (not shown). Concentrations of CO (80 ppbv) and ozone
(10 ppbv) are lowest at the edges of the flight legs; although we did
not sample extensively in regions that were far removed from Manaus, these
concentrations are consistent with the background concentrations that have
been previously reported in the region (Andreae et al., 2015; Martin et
al., 2010b; Harriss et al., 1990). Isoprene concentrations (PTR-MS <inline-formula><mml:math id="M199" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">69</mml:mn></mml:mrow></mml:math></inline-formula>)
typically reach their highest levels outside of the plume and are lower
inside, though isoprene concentrations of approximately 1 ppbv are still
observed in the plume. As seen in Fig. 1, much of the land cover outside
of Manaus is tropical forest, with some pasture land interspersed.
Significant isoprene emissions are expected and indeed measured from the
forest (Gu et al., 2017; Guenther et al., 2006). Significant
concentrations of methacrolein, methyl vinyl ketone, and isoprene
hydroxyhydroperoxides (PTR-MS <inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">71</mml:mn></mml:mrow></mml:math></inline-formula>), all first-generation oxidation
products of isoprene, are also observed and have a more complicated
structure (Liu et al., 2016). Concentrations of these products tend to be
highest near the edges of the plume, and they do not correlate strongly with
either isoprene (<inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.24</mml:mn></mml:mrow></mml:math></inline-formula>) or anthropogenic plume markers such
as CO (<inline-formula><mml:math id="M202" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.24</mml:mn></mml:mrow></mml:math></inline-formula>). Production of these oxidation products requires OH,
the concentration of which depends on <inline-formula><mml:math id="M203" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, to oxidize isoprene, and thus
they are expected to have a more complex relationship with the urban plume
and the biogenic emissions from the forest. Taken together, the observations
of both isoprene and its oxidation products suggest that photooxidation of
BVOCs is enhanced in the plume relative to the background, as would be
expected (Martin et al., 2017). Monoterpene concentrations (not shown) on
this flight are approximately a factor of 10 lower than isoprene
concentrations, consistent with previous measurements (Kesselmeier et
al., 2000), and are often near or below the instrument limit of detection
(<inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> pptv). Monoterpene concentrations correlate with
isoprene concentrations during the flight, when they are above the
instrument detection limit.</p>
      <p id="d1e4439">OA mass increases from background values of 0.5 <inline-formula><mml:math id="M205" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M206" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> to as
high as 2.8 <inline-formula><mml:math id="M207" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M208" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the Manaus plume, and on this
day it is correlated relatively well with both ozone (<inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.65</mml:mn></mml:mrow></mml:math></inline-formula>) and
CO (<inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.76</mml:mn></mml:mrow></mml:math></inline-formula>). While OA concentrations do not reach the levels that
are typically seen in the outflow of large North American cities, they are
significantly larger than background concentrations (up to <inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:mn mathvariant="normal">6</mml:mn><mml:mo>×</mml:mo></mml:mrow></mml:math></inline-formula>), indicating a
clear impact of the plume on OA concentrations. Sulfate also clearly
increase in the plume, though its peak concentrations occur toward the
southern edge of the plume, relative to organics, CO, and ozone, suggesting
sulfur emissions may not be co-located with other anthropogenic emissions.
However, there are also occasional peaks in the sulfate concentration (for
example at 10:47 LT) that coincide with minima in other plume indicators, such
as CO and ozone. Nitrate concentrations are significantly lower than sulfate
concentrations but tend to correlate more strongly with organic
concentrations than sulfate concentrations. There are indications that a
significant portion of the nitrate mass exists as organic nitrates,
consistent with measurements at the T3 site and with aircraft measurements
(Allan et al., 2014; de Sá et al., 2018; Schulz et al., 2018). The
<inline-formula><mml:math id="M212" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> : <inline-formula><mml:math id="M213" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> ion ratio is 5–7 in the plume, compared to a
<inline-formula><mml:math id="M214" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> : <inline-formula><mml:math id="M215" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> ion ratio of 1.2–1.5 measured during the campaign
for ammonium nitrate calibration aerosol. <inline-formula><mml:math id="M216" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">NO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> : <inline-formula><mml:math id="M217" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">NO</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> ion ratios
significantly above that of ammonium nitrate are indicative of the presence
of organic nitrates, though quantifying the organic fraction is challenging
(Farmer et al., 2010). Ammonium concentrations tend to closely mirror
sulfate concentrations. The bottom panel of Fig. 5 shows the fractional
composition of the aerosol, which helps to illustrate the relative
differences among the aerosol species. Organic species clearly dominate at
all points, with sulfate the next-most-important species.</p>
      <?pagebreak page10784?><p id="d1e4595">At 1000 m altitude, the plume can still be observed in the G-1 data, though
the concentrations of plume markers such as CO, ozone, and benzene are
lower. Increases in organic concentration are less sharp and defined than
observed at 500 m, though enhancements are still clear. The organic mass
fraction is somewhat smaller at 1000 m, and sulfate and ammonium mass
fractions are larger. Based on radiosonde measurements, the boundary layer
grew from 900 to 1200 m between the beginning and end of the flight on this
date. Data from the G-1 suggest that the 1000 m flight path was near the top
of the boundary layer. Thus, at 1000 m altitude, the data are influenced
both by the local conditions and from air that has been transported over longer
distances.</p>
      <p id="d1e4598">Figure 6 shows a PMF analysis of the organic species for the 13 March flight
along with independently measured tracers that might be expected to correlate
with the PMF factors. We were able to resolve the organic aerosol into three
factors: an OOA factor that is a proxy for SOA; an HOA factor that is a proxy
for primary organic particulate emissions; and an IEPOX SOA factor, which
forms from the heterogeneous uptake of IEPOX, a product of isoprene oxidation
under low-<inline-formula><mml:math id="M218" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> conditions (Hu et al., 2015; Robinson et al.,
2011; Lin et al., 2012; Zhang et al., 2011;, 2005a; de Sá et al., 2017).
Details of the PMF analysis, including mass spectra of the factors, can be
found in the Appendix and Supplement. As expected, both the OOA and HOA
factor mass loadings are significantly higher in the plume relative to the
background. The HOA factor correlates strongly with CO (<inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.79</mml:mn></mml:mrow></mml:math></inline-formula> for all data
at 500 m), while the OOA factor correlates strongly with ozone (<inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.81</mml:mn></mml:mrow></mml:math></inline-formula> for
all data at 500 m), though we will show below that the slope of the
correlation changes with plume age. The changing slope has the effect of
degrading the HOA–CO and OOA–ozone correlations, which are higher
for individual plume legs. The HOA factor is a larger fraction of the organic
mass on the legs nearest to Manaus and becomes a smaller fraction on the
downwind legs. The OOA mass fraction displays the opposite behavior,
increasing downwind as the plume ages. The transformation of HOA to
SOA and/or OOA has been observed previously, both in laboratory experiments
and in the field (Sage et al., 2008; Robinson et al., 2007; DeCarlo et al.,
2008; Zhang et al., 2007; Ng et al., 2010). Taken together, these
observations are consistent with the literature assignment of HOA as a marker
of primary organic emissions and OOA as a marker of secondary organic
aerosol. Outside of the plume, HOA concentrations approach zero. OOA
concentrations, on the other hand, remain significant and approach the organic
aerosol background concentrations. The IEPOX SOA factor does not appear to
change with passage through the plume and does not correlate with sulfate
aerosol on this day as may be expected based on the chemical mechanism, which
requires heterogeneous uptake of gas-phase IEPOX onto inorganic aerosol to
generate IEPOX SOA (Hu et al., 2015; Surratt et al., 2010; Gaston et al.,
2014; Nguyen et al., 2014). We note that the IEPOX SOA factor is noisy, is
near or below the limit of detection of organic aerosol
(0.13 <inline-formula><mml:math id="M221" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M222" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) for much of this flight, and is shown largely
for the sake of completeness. Because of the low concentrations, it is
difficult to draw definitive conclusions about IEPOX SOA formation on this
flight. However, given the focus of this flight was on tracking the Manaus
plume, which contains significant <inline-formula><mml:math id="M223" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, our findings are
consistent with de Sá et al. (2017), who report that <inline-formula><mml:math id="M224" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>x</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
from the Manaus plume suppresses IEPOX SOA formation in the plume and that
the IEPOX SOA factor was less than 5 % of the total OA at T3 at the time
of the G-1 overflight.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p id="d1e4680">PMF analysis of the organic aerosol on the 13 March 2014 flight. AMS
data are normalized to 23 <inline-formula><mml:math id="M225" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and 1013 hPa.</p></caption>
          <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/10773/2018/acp-18-10773-2018-f06.pdf"/>

        </fig>

      <p id="d1e4698">Figure 7 summarizes several relevant plume quantities at 500 m altitude as a
function of the approximate distance downwind from Manaus, which serves as a
proxy for the photochemical age of the air mass. The ratio of excess organic
aerosol to excess CO (<inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>) is a metric that is often
used to quantify organic aerosol formation in a source plume as it ages. The
utility of the <inline-formula><mml:math id="M227" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> metric rests mainly on the assumptions
that CO is conserved on the timescale of the measurements and that urban
emissions scale linearly with CO. Our calculation also assumes that Manaus
emissions are the dominant source of CO in the plume. Using this ratio
rather than absolute concentrations<?pagebreak page10785?> of organic aerosol can normalize for
dilution due to mixing of the plume with background air. The <inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values shown in Fig. 7 were calculated as the slope of a
linear regression line between the AMS-measured organic mass loadings and CO
concentrations. All data for each flight leg perpendicular to the wind
direction were included. Background values of OA and CO were not subtracted
from the data, and the regression was not forced through the origin. We
acknowledge that calculation of <inline-formula><mml:math id="M229" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values can be
sensitive to the calculation method and choice of background values for both
OA and CO; therefore, we performed calculations using different methods and
assuming different background concentrations for both OA and CO and find
general agreement between these methods (see Supplement for more details).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><caption><p id="d1e4771">Key metrics describing the evolution of the Manaus urban plume on
13 March. Each data point represents the average values for one pass through
the plume. A representative error bar is shown for each set of measurements.
Mean wind speeds were 7.3 m s<inline-formula><mml:math id="M230" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> on this flight, thus data capture
approximately the first 4–5 h of the plume aging. Calculations of <inline-formula><mml:math id="M231" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">Org</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values use method one with details on the
calculations and methods provided in the text and the Supplement. Spatial
locations of each leg are labelled in Fig. 1.</p></caption>
          <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/10773/2018/acp-18-10773-2018-f07.pdf"/>

        </fig>

      <p id="d1e4811">Two aspects of the <inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> distinguish these
measurements from most previous measurements in the literature. First,
<inline-formula><mml:math id="M233" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> is <inline-formula><mml:math id="M234" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">31</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M235" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M236" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M237" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, a value that is lower than the value
of <inline-formula><mml:math id="M238" display="inline"><mml:mrow><mml:mn mathvariant="normal">70</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M239" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M240" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M241" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> observed in the outflow of
cities in North America (e.g., de Gouw and Jimenez, 2009, and references therein).
The <inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values observed here are also
significantly smaller than the values of
77–157 <inline-formula><mml:math id="M243" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M244" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M245" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> we previously observed when fresh
urban anthropogenic emissions evolved in the presence of strong biogenic
emissions, as is the case in the present data set (Shilling et al., 2013;
Setyan et al., 2012). We measure a <inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">HOA</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> value
of 17.6 <inline-formula><mml:math id="M247" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M248" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M249" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> near Manaus (Fig. 7), which should
represent fresh emissions. This value is at the upper end of what is reported
in the literature for North American cities, indicating that lower primary
particulate emissions from Manaus are not responsible for the lower <inline-formula><mml:math id="M250" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values (DeCarlo et al., 2010; de Gouw and
Jimenez, 2009).</p>
      <p id="d1e5049">The second new aspect of these observations is that we do not observe a
corresponding increase in <inline-formula><mml:math id="M251" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> as the plume
photochemically ages, contrary to our expectations. We note that, as
described above, organic aerosol concentrations are significantly higher in
the plume than in the background, and the constant <inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>
values do not indicate that no OA formation occurs in the plume. Rather, the
<inline-formula><mml:math id="M253" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> analysis that follows focuses on understanding the
aging of the Manaus plume. Based on literature observations (de Gouw and
Jimenez, 2009; Kleinman et al., 2008; DeCarlo et al., 2010; Takegawa et al.,
2006; Sullivan et al., 2006; Freney et al., 2014), we hypothesized that
<inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> would rapidly increase in the Manaus plume due to
OA formation from sources not associated with urban CO emissions (Setyan
et al., 2012; Shilling et al., 2013). Specifically, we expected that enhanced
OH concentrations in the plume would lead to rapid oxidation of BVOCs
emitted from the surrounding forest, which would produce OA with little
concomitant production of CO and lead to a rapid increase in <inline-formula><mml:math id="M255" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>. As seen in Fig. 7, the data did not support this
hypothesis. As described in the Supplement, we performed the
<inline-formula><mml:math id="M256" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> calculation using several methods and assuming
different background CO and OA values and did not find significant increases
in <inline-formula><mml:math id="M257" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> in any of these calculations. Furthermore,
though we focus on <inline-formula><mml:math id="M258" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>org values based on the AMS data, we also
calculated <inline-formula><mml:math id="M259" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">volume</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> using aerosol size distribution data
from two independent instruments, the Ultra-High Sensitivity Aerosol
Spectrometer (UHSAS) and the Fast Integrated Mobility Spectrometer (FIMS),
that were also on board the G-1. Neither of these calculations indicates an
increase in <inline-formula><mml:math id="M260" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">volume</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> with plume age.</p>
      <p id="d1e5215">Previous studies have observed increases in <inline-formula><mml:math id="M261" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> with plume age, with the largest increases occurring for the first
<inline-formula><mml:math id="M262" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> day of aging and changes in <inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>
gradually levelling off beyond approximately 1–2 days (DeCarlo et al., 2010;
de Gouw and Jimenez, 2009; Kleinman et al., 2008; Freney et al., 2014). Based
on the mean wind speeds observed along the flight track (7.3 m s<inline-formula><mml:math id="M264" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)
and the transport distance (up to 100 km), we estimate that the plume was
4–5 h old at the farthest leg and freshly emitted over the city.
Unfortunately, photochemical clocks could not be used to more precisely
calculate the photochemical age of the plume (de Gouw et al., 2005; Kleinman
et al., 2003; Parrish et al., 1992). <inline-formula><mml:math id="M265" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">NO</mml:mi><mml:mi>y</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> measurements were
not available on this flight. Benzene and toluene concentrations were low and
noisy, particularly at increasingly downwind distances from Manaus. Though
our observations are limited to shorter aging timescales (4–5 h) than many
literature studies (1–2 days), the literature studies report measurable
changes in <inline-formula><mml:math id="M266" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> at short aging timescales
(Kleinman et al., 2008;<?pagebreak page10786?> DeCarlo et al., 2010). Furthermore, we clearly
observe other indicators of photochemical aging in the plume. Ozone
concentrations are 30–50 ppbv in the plume, compared to background levels
of 10–15 ppbv, indicating active photochemistry. Concentrations of isoprene
are lower in the plume than the background values observed outside of it.
Concentrations of isoprene inside the plume do not show a monotonic
dependence on plume age. The concentration of isoprene oxidation products
measured in the plume by the PTR-MS at <inline-formula><mml:math id="M267" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mn mathvariant="normal">71</mml:mn></mml:mrow></mml:math></inline-formula> monotonically increases with
plume aging, from 0.96 ppbv directly over the city to 1.27 ppbv at the
farthest leg. The average toluene : benzene ratio in the plume also
monotonically decreases with plume aging as would be expected, though
attempts to convert these ratios into a photochemical age resulted in
unrealistically high estimates of the plume age, likely due to noise in the
data as mentioned above (de Gouw et al., 2005). The mean particle oxidation
state (<inline-formula><mml:math id="M268" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="normal">OS</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) of plume OA increases from <inline-formula><mml:math id="M269" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula>
to <inline-formula><mml:math id="M270" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.44</mml:mn></mml:mrow></mml:math></inline-formula> as it ages. It is expected that photochemical aging would produce
progressively more oxygenated species downwind of Manaus that subsequently
partition to the aerosol phase, increasing the mean carbon oxidation state.
Other studies have observed a similar phenomenon as particles were
transported downwind of urban centers (DeCarlo et al., 2010). The particles
size distributions measured by both the FIMS and the UHSAS also indicate that
particles size increases downwind of Manaus. As discussed in the previous
section, we also observe that the mass fraction of HOA decreases and
simultaneously the mass fraction of OOA increases as the plume ages. As seen
in Fig. 7, <inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">HOA</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> is
17.6 <inline-formula><mml:math id="M272" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M273" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M274" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> on the leg nearest to the city and
decreases to 10.6 <inline-formula><mml:math id="M275" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M276" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M277" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. At the same time,
<inline-formula><mml:math id="M278" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OOA</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> increases from 9.2 to
23.1 <inline-formula><mml:math id="M279" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M280" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M281" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Thus, some fraction of HOA appears
to be lost – through volatilization, deposition, or a combination of both –
with the lost HOA mass balanced by an increase in OOA mass. All of these
factors indicate that active photochemistry is occurring and is transforming
VOCs into SOA and aging the particles. Thus, we would expect to see
significant increases in <inline-formula><mml:math id="M282" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> for these
aging times if similar observations of outflow from North American cities
were representative of the Manaus plume.</p>
      <p id="d1e5500">The sum of the HOA and OOA factors explains <inline-formula><mml:math id="M283" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">95</mml:mn></mml:mrow></mml:math></inline-formula> % of the total
OA mass within the plume, as the IEPOX SOA mass is small. Though calculating
the <inline-formula><mml:math id="M284" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">HOA</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M285" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OOA</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> ratios introduces
some noise (particularly <inline-formula><mml:math id="M286" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OOA</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> close to Manaus), the sum
of these ratios is approximately constant with aging and equal to the
<inline-formula><mml:math id="M287" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values. Thus, the total OA mass is conserved with
loss and volatilization of HOA balanced out by formation of OOA. This
process appears to explain the lack of an increase in <inline-formula><mml:math id="M288" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> with aging. It is difficult to determine whether the OOA carbon mass is
anthropogenic in origin, biogenic, or (most likely) a combination of both.
Volatilized HOA and co-emitted anthropogenic VOCs would undergo oxidation in
the plume, and the products may condense and be detected as OOA (Sage et
al., 2008; Robinson et al., 2007). In addition, we see evidence that biogenic
VOCs are oxidized in the plume, likely more rapidly than in the background
due to enhanced in-plume OH concentrations, and these oxidation products may
also condense as OOA. Either mechanism or a combination of both would
explain the observed increase in the carbon oxidation state. It is
surprising that the volatilized HOA mass is compensated by oxidation and
recondensation of SOA for these relatively fresh particles.</p>
      <?pagebreak page10787?><p id="d1e5602">Thus far, we have focused on a detailed analysis of the 13 March 2014 plume
because there is a clear contrast between the background and plume data
through the portion of the flight in the boundary layer, there is little
interference from biomass burning and cloud processing, the flight pattern
was extended far enough downwind to investigate a significant aging time, and
the data from all key instruments are available and complete. In an effort to
understand whether the <inline-formula><mml:math id="M289" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> observations on
13 March are representative of plume aging in the wet season, we have
screened the rest of the wet-season flight data and, based on the criteria
mentioned above, identified two additional flights, 11 and 16 March
2014, for analysis. The <inline-formula><mml:math id="M290" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values for
these data as a function of distance from Manaus are shown in Fig. 8. On
11 March, <inline-formula><mml:math id="M291" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values average
29.9 <inline-formula><mml:math id="M292" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M293" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M294" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, show little change with distance
from Manaus, and show similar variability between legs to the 13 March flight
data. The mean wind speed for the analyzed portion of the flight was
5.3 m s<inline-formula><mml:math id="M295" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, translating to an approximate maximum plume age of
5–5.5 h. On 16 March, <inline-formula><mml:math id="M296" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values average
42.0 <inline-formula><mml:math id="M297" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M298" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M299" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, show little significant increase
with distance from Manaus, and exhibit a larger range of values than the
other two data sets. The mean wind speed for the analyzed portion of the
16 March flight was 4.6 m s<inline-formula><mml:math id="M300" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, translating to an approximate maximum
plume age of 6–6.5 h. We estimate that the error in the <inline-formula><mml:math id="M301" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> measurement is approximately
10 <inline-formula><mml:math id="M302" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M303" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M304" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; thus the difference in average
<inline-formula><mml:math id="M305" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values between the 16 March and the 11
and 13 March data sets is at the edge of what we consider significant. The
average <inline-formula><mml:math id="M306" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> is
34.3 <inline-formula><mml:math id="M307" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M308" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M309" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for all flights, and the combined
data set collectively represents the first 4–6.5 h of aging. In addition to
the aircraft data, Cirino et al. (2018) report that the median <inline-formula><mml:math id="M310" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values for the plume as measured at the T2 and
T3 sites are nearly identical to one another in the wet season and similar to
measurements from the G-1 (Cirino et al., 2018).
Thus, the data from both G-1 and the ground sites suggest that <inline-formula><mml:math id="M311" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values of
30–40 <inline-formula><mml:math id="M312" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M313" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M314" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, which change little in the first
4–6.5 h of plume aging, are representative of the Manaus plume behavior in
the wet season. As previously discussed, most studies examining outflow of
North American cities have shown changes in <inline-formula><mml:math id="M315" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> that are largest at the shortest aging times, and we are unaware of
reports of constant <inline-formula><mml:math id="M316" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> in an aging urban
plume. Both the identity and the distribution of Manaus's emissions may very
well be distinct from those of a typical North American city. In addition,
background concentrations of anthropogenic pollutants are lower and biogenic
VOC emissions are higher in the unperturbed rain forest surrounding Manaus
relative to most North American cities. Finally, background OA concentrations
near Manaus are lower in the wet season than in most other continental
regions, and SOA yield is known to increase with OA mass loading (Odum et al.,
1996). All of these factors may contribute of the difference in the <inline-formula><mml:math id="M317" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> observations.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><caption><p id="d1e5995"><inline-formula><mml:math id="M318" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> measurements in the plume as
a function of distance from Manaus for 11, 13, and 16 March 2014. A
representative error bar is shown for each set of measurements. Mean wind
speeds were 5.8, 7.3, and 4.6 m s<inline-formula><mml:math id="M319" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> on 11, 13, and 16 March,
respectively. Collectively, the data capture approximately the first
4–6.5 h of the plume aging.</p></caption>
          <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://acp.copernicus.org/articles/18/10773/2018/acp-18-10773-2018-f08.pdf"/>

        </fig>

      <p id="d1e6032">A similar phenomenon, clear chemical aging with little change of
<inline-formula><mml:math id="M320" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula>, has been observed in field studies of biomass burning
plumes by several researchers (Jolleys et al., 2012; Cubison et al.,
2011; Hecobian et al., 2011; Akagi et al., 2012; Forrister et al., 2015).
Clearly, the mix of organic compounds emitted from a forest fire and from
the Manaus urban region will be significantly different, and this is not to
imply that the detailed chemical mechanisms are the same. However, the
similarity of the observations is suggestive that a similar process could
occur in both types of plumes.</p>
</sec>
<sec id="Ch1.S3.SS3">
  <title>Sources of sulfate in the Manaus region</title>
      <p id="d1e6058">Sulfate was the second-largest contributor to the non-refractory aerosol
mass during the GoAmazon 2014/5 campaign (accounting for 13 % of the
PM<inline-formula><mml:math id="M321" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:math></inline-formula> mass in both the wet and dry season), so it is also
instructive to examine the source of sulfate in the area. In 2014 Manaus
generated much of its power from fuel oil and diesel, which are known to
emit <inline-formula><mml:math id="M322" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> that eventually oxidizes to form condensable sulfate
(Medeiros et al., 2017). However, several observations suggest that the
major source of sulfate in the plume may not come from local <inline-formula><mml:math id="M323" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
emissions. First, on many flights, particulate sulfate levels clearly
increases in the plume (e.g., Fig. 5), including on the legs closest to
Manaus and thus very near the source. The lifetime of <inline-formula><mml:math id="M324" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> with respect
to homogeneous oxidation by OH is expected to be about 1 week, and only
a small fraction (<inline-formula><mml:math id="M325" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> % on the farthest leg) of <inline-formula><mml:math id="M326" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
emissions would have time to oxidize to <inline-formula><mml:math id="M327" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> in the gas phase. In
addition, there is no indication of dramatically enhanced sulfate loading
downwind of Manaus on the 13 March flight, when the <inline-formula><mml:math id="M328" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">SO</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> ratio averages 2.6 <inline-formula><mml:math id="M329" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M330" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M331" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and does not increase with
plume age. On the 13 March flight, there was no precipitation and there were relatively
few clouds along the flight track, so heterogeneous oxidation of sulfate in
cloud water cannot explain the sulfate enhancement seen in the plume.</p>
      <p id="d1e6193">We can possibly attribute these observations to two mechanisms. First, it is
possible that natural sulfur emissions originating downwind of Manaus undergo
oxidation by enhanced concentrations of OH in the Manaus plume and
subsequently condense (Andreae et al., 1990; Chen et al., 2009). Andreae et
al. (1990) estimate that in-basin sulfur emissions are responsible for
approximately 0.05 <inline-formula><mml:math id="M332" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M333" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> of the total sulfate loading.
Measurements during the AMAZE-08 campaign also suggested natural in-basin
emissions and transport of natural out-of-basin emission were a significant
source of particulate sulfate (Chen et al., 2009). A
0.05 <inline-formula><mml:math id="M334" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M335" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> sulfate loading is roughly consistent with our
measured sulfate concentrations outside of the plume and would account for
15–30 % of the sulfate in the plume on the 13 March flight. Higher OH
concentrations in the plume would speed oxidation of natural sulfur compounds
and further increase the fraction of in-plume sulfate originating from
natural emissions. Second, power plant plumes may directly emit sulfuric
acid, which then may condenses on pre-existing particles. A previous aircraft
study of the Manaus outflow observed high concentrations of particles smaller
than 40 nm in power plant plumes, which they attribute to sulfuric acid
(Kuhn et al., 2010). Though particles in this size range are unlikely to be
detected by the AMS, condensation of sulfuric acid on larger, pre-existing
particles would also contribute to the in-plume sulfate observations.</p>
</sec>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <title>Summary and implications</title>
      <p id="d1e6241">In summary, we report on measurements of the aerosol chemical composition,
sources, and evolution of the urban plume from research flights conducted in
both the wet and dry season in the vicinity of Manaus, Brazil. Median mass
loading of organics, sulfate, nitrate, and ammonium was 0.85, 0.19, 0.02,
and 0.06 <inline-formula><mml:math id="M336" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M337" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the wet season and 4.29, 0.77, 0.05, and
0.25 <inline-formula><mml:math id="M338" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M339" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the dry season, respectively. Despite the significant difference in
mass loadings, the average fractional composition of the aerosol did not
change significantly between seasons. Organics dominate the aerosol<?pagebreak page10788?> chemical
composition in both seasons, comprising 80 % of the total non-refractory
aerosol mass. The OA was significantly more oxidized in the dry season with
a <inline-formula><mml:math id="M340" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="normal">OS</mml:mi><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> of <inline-formula><mml:math id="M341" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.02</mml:mn></mml:mrow></mml:math></inline-formula> in the dry season and <inline-formula><mml:math id="M342" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.45</mml:mn></mml:mrow></mml:math></inline-formula> in the wet season.</p>
      <p id="d1e6317">The flight on 13 March 2014 was a golden day to study the evolution of the
Manaus plume as it advected to the surrounding Amazon tropical forest. The
organic and sulfate aerosol concentrations were both significantly enhanced
in the plume along with CO, ozone, and benzene. The spatial distribution of
the sulfate aerosol was shifted toward the southern edge of the plume,
relative to organics, CO, and benzene. As the plume is transported downwind
of Manaus, we observe a change in the relative fraction of HOA and OOA mass.
<inline-formula><mml:math id="M343" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">HOA</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values decreased from
17.6 <inline-formula><mml:math id="M344" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M345" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M346" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> over Manaus to
10.6 <inline-formula><mml:math id="M347" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M348" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M349" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> 95 km downwind of Manaus,
indicating a substantial loss of HOA mass. This loss of HOA mass was balanced
out by OOA formation, with <inline-formula><mml:math id="M350" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">OOA</mml:mi></mml:mrow><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> values
increasing from 9.2 to 23.1 <inline-formula><mml:math id="M351" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M352" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M353" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> during the
4–5 h aging timescale. Concomitantly, the mean carbon oxidation state of
the OA increased from <inline-formula><mml:math id="M354" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.6</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M355" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.44</mml:mn></mml:mrow></mml:math></inline-formula>. Because the loss of HOA mass was
balanced out by addition of OOA mass, net changes in <inline-formula><mml:math id="M356" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> with plume age were not observed and averaged
31 <inline-formula><mml:math id="M357" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M358" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M359" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Analysis of data from two additional
fights during the wet season also found no net changes in <inline-formula><mml:math id="M360" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> with plume age. The average <inline-formula><mml:math id="M361" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> for all the analyzed G-1 data was
34 <inline-formula><mml:math id="M362" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g m<inline-formula><mml:math id="M363" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> ppmv<inline-formula><mml:math id="M364" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and collectively represents the first
4–6.5 h of plume aging. The observation of
constant<?xmltex \hack{\vadjust{\newpage}}?> <inline-formula><mml:math id="M365" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> with
aging was in contrast to our hypothesis that <inline-formula><mml:math id="M366" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> would increase rapidly due to plume-enhanced oxidation of BVOCs,
emitted by the surrounding tropical forest and not associated with CO
emissions, and subsequent conversion to OA mass. Our <inline-formula><mml:math id="M367" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> observations are also in contrast to
literature observations of the outflow of several different North American
urban centers, which have shown increases in <inline-formula><mml:math id="M368" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="normal">org</mml:mi><mml:mo>/</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mrow class="chem"><mml:mi mathvariant="normal">CO</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> for the first 1–2 days of plume aging (Kleinman et al., 2008; de
Gouw and Jimenez, 2009; DeCarlo et al., 2010; Freney et al., 2014; Sullivan
et al., 2006).</p>
      <p id="d1e6656">The data set generated from the G-1 measurements during GoAmazon 2014/5
provide a set of observations for understanding aerosol chemistry in the
Amazon region. Our preliminary analysis shows that aging of the Manaus plume
generates less OA in the wet season when compared to the aging of the
outflow of many North American cities. The differences are likely due to a
combination of factor including differences in emissions from both Manaus
and the surrounding tropical forest, lower levels of background
anthropogenic pollution in the Amazon, and lower background OA
concentrations into which semi-volatile organics can partition. These
results have implications for modeling efforts and for understanding how
urban pollution impacts the surrounding pristine Amazon.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability">

      <p id="d1e6664">All ARM data sets used in this study may be downloaded from
the ARM website at
<uri>https://www.arm.gov/research/campaigns/amf2014goamazon</uri> (last access: 24 May 2018).</p>
  </notes><?xmltex \hack{\clearpage}?><app-group>

<?pagebreak page10789?><app id="App1.Ch1.S1">
  <title>PMF analysis of AMS data</title>
      <p id="d1e6679">Positive matrix factorization (PMF) analysis was performed on the
high-resolution organic aerosol mass spectra and error matrix that were
measured using the HR-ToF-AMS on the G-1. The organic aerosol mass spectra
(<inline-formula><mml:math id="M369" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace width="0.25em" linebreak="nobreak"/><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">122</mml:mn></mml:mrow></mml:math></inline-formula>) and error matrix were initially prepared using the
high-resolution AMS analysis package (Squirrel v1.55H, PIKA v1.44H) as
described in the literature (Jimenez et al., 2003; Allan et al., 2004;
DeCarlo et al., 2006; Aiken et al., 2007, 2008). The AMS organic mass loading
data were normalized to the laboratory calibration conditions of
23 <inline-formula><mml:math id="M370" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and 1013 hPa. Error was estimated from the ion-counting
statistics (Allan et al., 2003), and a minimum error was assigned to each
signal (Ulbrich et al., 2009). Ions with signal below zero (due to noise)
were removed from the matrix. In addition, ions with an average
signal-to-noise ratio (<inline-formula><mml:math id="M371" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mo>/</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula>) less than 0.75 were removed, and ions with
average <inline-formula><mml:math id="M372" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mo>/</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula> between 0.75 and 2 were downweighted by a factor of 2 (Ulbrich
et al., 2009). Ions whose signals are assigned based on the measured
<inline-formula><mml:math id="M373" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> signal in the ratios described by Aiken et al. (2008)
(<inline-formula><mml:math id="M374" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">CO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M375" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M376" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">HO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M377" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>) are also
downweighted by a factor of 2 (Ulbrich et al., 2009). The PFM2 algorithm
version 4.2 (Paatero, 1997; Paatero and Tapper, 1994) was used to analyze the
matrix, and results were visualized and evaluated using the PMF Evaluation
Tool (v 2.06) described by Ulbrich et al. (2009). PMF analysis of this data
set was challenging, due the combination of low concentrations of organic
aerosol, fast sampling required for aircraft operations, and the often small
changes in aerosol concentrations across the flight domain. PMF analysis on
data from a single flight often (though not always) resulted in a failure to
resolve factors that are described in the literature (e.g., HOA, IEPOX SOA).
Instead, we often observes split factors that are largely dominated by a
single high-<inline-formula><mml:math id="M378" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mo>/</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula> ion (<inline-formula><mml:math id="M379" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">CHO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M380" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M381" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>). For example, the IEPOX SOA factor was not resolved
when the 13 March flight was analyzed on its own, largely due to the small
mass loading of this factor (Fig. 6). Therefore, data from all flights during
the wet season were combined into a single matrix and analyzed together,
which also forces a common solution for the entire data set.</p>

<?xmltex \floatpos{t}?><table-wrap id="App1.Ch1.T1" specific-use="star"><caption><p id="d1e6854">Summary of scaled residuals and reasoning used in the choice of a
five-factor solution in the PMF analysis of the wet-season HR-AMS data.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="256.074803pt"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Number of</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M382" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi>exp⁡</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">Notes</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Factors</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">2</oasis:entry>
         <oasis:entry colname="col2">0.28</oasis:entry>
         <oasis:entry colname="col3">4 % of mass unresolved, OOA-like factors resolved but look mixed</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">3</oasis:entry>
         <oasis:entry colname="col2">0.26</oasis:entry>
         <oasis:entry colname="col3">2 % of mass still unresolved, OOA factors looks split and unrealistic, <?xmltex \hack{\hfill\break}?>no HOA or IEPOX SOA factor</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">4</oasis:entry>
         <oasis:entry colname="col2">0.25</oasis:entry>
         <oasis:entry colname="col3">Most of mass resolved (0.1 % residual), HOA factor now resolved, <?xmltex \hack{\hfill\break}?>OOA factor split and unrealistic</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">5</oasis:entry>
         <oasis:entry colname="col2">0.24</oasis:entry>
         <oasis:entry colname="col3">IEPOX factor resolved, OOA factor split and unrealistic</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e6961">We chose a five-factor solution to the combined matrix based on a number of
criteria, including the residuals and fit quality, the correlation of chosen factors with
independently measured species (e.g., CO, ozone), the realism of the factor
mass spectra (are the spectra representative of a physically
realistic aerosol component?), and the comparison of the factor spectra to
literature data. Table A1 summarizes our decision-making and lists the
residuals as a function of the number of PMF factors. As seen in Table A1,
the residuals continue to significantly decrease in moving from a two- to
five-factor solution. For example, <inline-formula><mml:math id="M383" display="inline"><mml:mrow><mml:mi>Q</mml:mi><mml:mo>/</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi>exp⁡</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> decreases from 0.28 to 0.24,
and the fraction of the residual aerosol mass decreases from 4 % to
0.1 % in moving from the two to the five-factor solution. Figure S2 in
the Supplement shows the residuals and scaled residuals for each time point
in the matrix for the five-factor solution, indicating that all the data are
well fit. Solutions with three or fewer factors failed to separate the HOA
and the IEPOX SOA factors, which are well described in the literature and
were reasonably expected to be present in the data. One of the OOA-like
spectra in the three-factor solution also appeared to have signs of both the
HOA and IEPOX SOA factors, as evidenced by significant signal of the key
marker ions <inline-formula><mml:math id="M384" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">4</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">9</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M385" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">57</mml:mn></mml:mrow></mml:math></inline-formula>) for HOA and
<inline-formula><mml:math id="M386" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">5</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">6</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M387" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>/</mml:mo><mml:mi>z</mml:mi><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mn mathvariant="normal">82</mml:mn></mml:mrow></mml:math></inline-formula>) for IEPOX SOA. In the four-factor solution,
an HOA factor was resolved along with three OOA-like spectra, though the OOA
spectra show evidence of factor splitting (discussed below). The five-factor
solution was able to resolve HOA, IEPOX SOA, and three OOA-like factors.</p>
      <p id="d1e7048">Figures S3 and S4 show the time series and mass spectra for the five-factor
solution. Examination of the mass spectra (Fig. S4) suggests that the OOA
factor has split. For example, the mass spectrum of factor 3 is dominated by
the <inline-formula><mml:math id="M388" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">CHO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> ion with little signal through the rest of the spectra. The
spectrum of factor 1 is dominate by <inline-formula><mml:math id="M389" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> and other ions that are
based on the <inline-formula><mml:math id="M390" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> signal (<inline-formula><mml:math id="M391" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">CO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M392" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M393" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">HO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math id="M394" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>) in prescribed ratios (Aiken et al., 2008). These
factors are unlikely to represent some real aerosol component, as no known
OA produces such simple spectra. In addition, the time series of factors 1
and 2 are highly correlated in time (see Fig. S5). In summary, two factors
are highly correlated in time (factors 1 and 2), and a third factor is
dominated by a single ion. Thus, we recombine factors 1, 2, and 3 into a
single factor, which we label OOA. The spectra of the resultant three
factors (after recombining) are shown in Fig. S6, and the recombined
factor is presented in the main text. The mathematical reason for the factor
splitting is clear: aerosol loading is low, the AMS is sampling at a
relatively fast rate (13 s averaging time), and the AMS spectra are
dominated by a relatively small number of high-<inline-formula><mml:math id="M395" display="inline"><mml:mrow><mml:mi>S</mml:mi><mml:mo>/</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:math></inline-formula> ions. In separate
analyses, we downweighted the <inline-formula><mml:math id="M396" display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">CHO</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M397" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:msup><mml:mi mathvariant="normal">O</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, and
<inline-formula><mml:math id="M398" display="inline"><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mo>+</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> ion signals by factors of 2–10 in an attempt to minimize the
splitting of the OOA factor but were unsuccessful.</p>
      <p id="d1e7196">Comparison of the factor mass spectra to literature PMF spectra and
correlation of the factor time profiles with independent measurements
provides further support for the 5-factor solution. The combined OOA factor
compares well with the spectra presented in the literature for OOA (e.g.,
Zhang et al., 2007, 2011, 2005b; Ng et al., 2010). As shown in Fig. 6, the
OOA factor correlates well with ozone, a known secondary species that also
forms through photochemical reactions. Similarly, the spectrum of factor 4
compares well with the mass spectrum of HOA widely reported in the literature
(e.g., Zhang et al., 2007, 2011, 2005b; Ng et al., 2010). As discussed in the
text and shown in Fig. 6, the HOA factor correlates well with CO, a known
tracer of anthropogenic combustion processes. We identify factor 5 as the
IEPOX SOA factor that is widely reported in the literature and believed to
represent SOA formed from the heterogeneous uptake of isoprene epoxydiols
onto pre-existing aerosol (Hu et<?pagebreak page10790?> al., 2015; Robinson et al., 2011; Lin et
al., 2012). Our assignment is based on a comparison of the factor mass
spectral profile with those in the literature, e.g., Hu et al. (2015).</p><?xmltex \hack{\clearpage}?><supplementary-material position="anchor"><p id="d1e7199">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/acp-18-10773-2018-supplement" xlink:title="pdf">https://doi.org/10.5194/acp-18-10773-2018-supplement</inline-supplementary-material>.</p></supplementary-material>
</app>
  </app-group><notes notes-type="authorcontribution">

      <p id="d1e7210">JES, MSP, ECF, SdS, JMH, SRS, JT, and JW collected
measurements and analyzed data. PA, KML, LATM, JW, and STM designed the field
campaign and flight plans. JES prepared the manuscript with contributions
from the co-authors.</p>
  </notes><notes notes-type="competinginterests">

      <p id="d1e7216">The authors declare that they have no conflict of interest.</p>
  </notes><notes notes-type="sistatement">

      <p id="d1e7222">This article is part of the special issue “Observations and
Modeling of the Green Ocean Amazon (GoAmazon2014/5) (ACP/AMT/GI/GMD
inter-journal SI)”. It is not associated with a conference.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e7228">The authors thank the G-1 flight and ground crews for supporting the
GoAmazon 2014/5 mission. Funding for data collection on board the G-1
aircraft and at the ground sites was provided by the Atmospheric Radiation
Measurement (ARM) Climate Research Facility, a U.S. Department of Energy
(DOE) Office of Science user facility sponsored by the Office of Biological
and Environmental Research (OBER). Data analysis and research were supported
by the U.S. DOE's Atmospheric System Research Program under contract
DE-AC06-76RLO 1830 at PNNL. PNNL is operated for the U.S. DOE by Battelle
Memorial Institute. We acknowledge the support from the Central Office of
the Large Scale Biosphere Atmosphere Experiment in Amazonia (LBA), the
Instituto Nacional de Pesquisas da Amazonia (INPA), and the Instituto
Nacional de Pesquisas Espaciais (INPE). Paulo Artaxo acknowledges
Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
grants 2013/05014-0 and 2017/17047-0. The work was conducted under licenses
001262/2012-2 and 001030/2012-4 of the Brazilian National Council for
Scientific and Technological Development (CNPq).<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: Tuukka Petäjä<?xmltex \hack{\newline}?>
Reviewed by: two anonymous referees</p></ack><ref-list>
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    <!--<article-title-html>Aircraft observations of the chemical composition and aging of aerosol in the Manaus urban plume during GoAmazon 2014/5</article-title-html>
<abstract-html><p>The Green Ocean Amazon (GoAmazon 2014/5) campaign, conducted from
January 2014 to December 2015 in the vicinity of Manaus, Brazil, was designed
to study the aerosol life cycle and aerosol–cloud interactions in both
pristine and anthropogenically influenced conditions. As part of this
campaign, the U.S. Department of Energy (DOE) Gulfstream 1 (G-1) research aircraft was
deployed from 17 February to 25 March  2014 (wet season) and 6 September to
5 October 2014 (dry season) to investigate aerosol and cloud properties
aloft. Here, we present results from the G-1 deployments focusing on
measurements of the aerosol chemical composition and secondary organic
aerosol (SOA) formation and aging.</p><p>In the first portion of the paper, we provide an overview of the data
and compare and contrast the data from the wet and dry season. Organic aerosol (OA) dominates the deployment-averaged chemical composition,
comprising 80&thinsp;% of the non-refractory PM<sub>1</sub> aerosol mass, with sulfate
comprising 14&thinsp;%, nitrate 2&thinsp;%, and ammonium 4&thinsp;%. This product
distribution was unchanged between seasons, despite the fact that total
aerosol loading was significantly higher in the dry season and that regional
and local biomass burning was a significant source of OA mass in the dry,
but not wet, season. However, the OA was more oxidized in the dry season,
with the median of the mean carbon oxidation state increasing from −0.45 in
the wet season to −0.02 in the dry season.</p><p>In the second portion of the paper, we discuss the evolution of the
Manaus plume, focusing on 13 March 2014, one of the exemplary days in the
wet season. On this flight, we observe a clear increase in OA concentrations
in the Manaus plume relative to the background. As the plume is transported
downwind and ages, we observe dynamic changes in the OA. The mean carbon
oxidation state of the OA increases from −0.6 to −0.45 during the 4–5&thinsp;h
of photochemical aging. Hydrocarbon-like organic aerosol (HOA) mass is lost,
with ΔHOA∕ΔCO values
decreasing from 17.6&thinsp;µg&thinsp;m<sup>−3</sup>&thinsp;ppmv<sup>−1</sup> over Manaus to 10.6&thinsp;µg&thinsp;m<sup>−3</sup>&thinsp;ppmv<sup>−1</sup> 95&thinsp;km downwind.
Loss of HOA is balanced out by formation of oxygenated organic aerosol (OOA),
with ΔOOA∕ΔCO increasing from 9.2 to 23.1&thinsp;µg&thinsp;m<sup>−3</sup>&thinsp;ppmv<sup>−1</sup>.
Because hydrocarbon-like organic aerosol (HOA) loss is balanced by OOA formation, we observe
little change in the net Δorg∕ΔCO values;
Δorg∕ΔCO averages 31&thinsp;µg&thinsp;m<sup>−3</sup>&thinsp;ppmv<sup>−1</sup> and does not
increase with aging. Analysis of the Manaus plume evolution using data from
two additional flights in the wet season showed similar trends in Δorg∕ΔCO
to the 13 March  flight; Δorg∕ΔCO values
averaged 34&thinsp;µg&thinsp;m<sup>−3</sup>&thinsp;ppmv<sup>−1</sup> and showed little change over
4–6.5&thinsp;h of aging. Our observation of constant Δorg∕ΔCO
are in contrast to literature studies of the outflow of several North
American cities, which report significant increases in
Δorg∕ΔCO for the first day of plume aging. These observations suggest that SOA
formation in the Manaus plume occurs, at least in part, by a different
mechanism than observed in urban outflow plumes in most other literature
studies. Constant Δorg∕ΔCO with plume aging has been
observed in many biomass burning plumes, but we are unaware of reports of
fresh urban emissions aging in this manner. These observations show that
urban pollution emitted from Manaus in the wet season forms less particulate
downwind as it ages than urban pollution emitted from North American cities.</p></abstract-html>
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