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  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">ACP</journal-id>
<journal-title-group>
<journal-title>Atmospheric Chemistry and Physics</journal-title>
<abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1680-7324</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-16-2273-2016</article-id><title-group><article-title>Observations of fluorescent aerosol–cloud interactions in the free troposphere at the High-Altitude Research Station Jungfraujoch</article-title>
      </title-group><?xmltex \runningtitle{Alpine fluorescent aerosol--cloud interactions}?><?xmltex \runningauthor{I.~Crawford et~al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Crawford</surname><given-names>I.</given-names></name>
          <email>i.crawford@manchester.ac.uk</email>
        <ext-link>https://orcid.org/0000-0003-4433-7310</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Lloyd</surname><given-names>G.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Herrmann</surname><given-names>E.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3 aff4">
          <name><surname>Hoyle</surname><given-names>C. R.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-1369-9143</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Bower</surname><given-names>K. N.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9802-3264</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Connolly</surname><given-names>P. J.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Flynn</surname><given-names>M. J.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Kaye</surname><given-names>P. H.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6950-4870</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Choularton</surname><given-names>T. W.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Gallagher</surname><given-names>M. W.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4968-6088</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Centre for Atmospheric Science, SEAES, University of Manchester, Manchester, UK</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>NCAS, National Centre for Atmospheric Science, University of Manchester, Manchester, UK</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Laboratory of Atmospheric Chemistry, Paul Scherrer Institute, Villigen, Switzerland</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>WSL Institute for Snow and Avalanche Research SLF, Davos, Switzerland</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Science and Technology Research Institute, University of Hertfordshire, Hatfield, UK</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">I. Crawford (i.crawford@manchester.ac.uk)</corresp></author-notes><pub-date><day>26</day><month>February</month><year>2016</year></pub-date>
      
      <volume>16</volume>
      <issue>4</issue>
      <fpage>2273</fpage><lpage>2284</lpage>
      <history>
        <date date-type="received"><day>31</day><month>July</month><year>2015</year></date>
           <date date-type="rev-request"><day>25</day><month>September</month><year>2015</year></date>
           <date date-type="rev-recd"><day>5</day><month>February</month><year>2016</year></date>
           <date date-type="accepted"><day>9</day><month>February</month><year>2016</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/3.0/">http://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://acp.copernicus.org/articles/.html">This article is available from https://acp.copernicus.org/articles/.html</self-uri>
<self-uri xlink:href="https://acp.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/.pdf</self-uri>


      <abstract>
    <p>The fluorescent nature of aerosol at a high-altitude Alpine site was studied using a
wide-band integrated bioaerosol (WIBS-4) single particle multi-channel ultraviolet – light-induced fluorescence (UV-LIF) spectrometer. This was supported
by comprehensive cloud microphysics and meteorological measurements with the
aims of cataloguing concentrations of bio-fluorescent aerosols at this high-altitude site and also investigating possible influences of UV–fluorescent
particle types on cloud–aerosol processes.</p>
    <p>Analysis of background free tropospheric air masses, using a total aerosol
inlet, showed there to be a minor increase in the fluorescent aerosol
fraction during in-cloud cases compared to out-of-cloud cases. The size
dependence of the fluorescent aerosol fraction showed the larger aerosol to
be more likely to be fluorescent with 80 % of 10 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m particles
being fluorescent. Whilst the fluorescent particles were in the minority
(<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>Fl</mml:mtext></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>All</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.27 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.19), a new hierarchical
agglomerative cluster analysis approach, <xref ref-type="bibr" rid="bib1.bibx8" id="text.1"/> revealed the
majority of the fluorescent aerosols were likely to be representative of
fluorescent mineral dust. A minor episodic contribution from a cluster likely
to be representative of primary biological aerosol particles (PBAP) was also
observed with a wintertime baseline concentration of
0.1 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.4 L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Given the low concentration of this cluster and
the typically low ice-active fraction of studied PBAP
(e.g. <italic>pseudomonas syringae</italic>), we suggest that the contribution to the
observed ice crystal concentration at this location is not significant during
the wintertime.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

      <?xmltex \hack{\newpage}?>
<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p>The formation of cloud particles and their subsequent interactions with the
atmosphere are highly uncertain, with the formation and evolution of mixed-phase and glaciated clouds being poorly understood <xref ref-type="bibr" rid="bib1.bibx36" id="paren.2"/>.
Improving our understanding of primary ice nucleation is critical in
underpinning these uncertainties, as even modest concentrations of primary ice
can result in the rapid glaciation via secondary ice production mechanisms
and subsequently cause precipitation in mixed-phase clouds, drastically
changing cloud lifetime <xref ref-type="bibr" rid="bib1.bibx31 bib1.bibx6 bib1.bibx9" id="paren.3"/>;
e.g. <xref ref-type="bibr" rid="bib1.bibx6" id="text.4"/> showed that low concentrations of primary ice
(0.01 L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) resulted in the rapid glaciation of a shallow convective
wintertime cumulus via the Hallet–Mossop ice multiplication process.</p>
      <p>Many candidate aerosols have been assessed for their heterogeneous ice nucleating
ability with a particular emphasis being placed on mineral dust and primary
biological aerosols. The ice nucleating efficiency of many naturally
occurring and surrogate dust aerosols have been investigated and they are
generally considered to be efficient ice nuclei with observations of ice
activation occurring over water subsaturated and supersaturated conditions at
temperatures below <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>10 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C <xref ref-type="bibr" rid="bib1.bibx20" id="paren.5"/>. The influence
of accumulated coatings such as secondary organic aerosol, sulfuric acid, and
ammonium sulfate through atmospheric processing have also been assessed,
where it was found these act to significantly increase the saturation ratio
required for ice nucleation, effectively deactivating an otherwise ice-active
mineral dust <xref ref-type="bibr" rid="bib1.bibx2 bib1.bibx26 bib1.bibx40 bib1.bibx11 bib1.bibx13 bib1.bibx33" id="paren.6"/>.
Saharan desert dust was observed during an experiment in a Florida region
where it was suggested that the dust may have been acting as an effective
high-temperature ice nucleus resulting in the observed glaciation of an
altocumulus cloud at <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>5 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C <xref ref-type="bibr" rid="bib1.bibx38" id="paren.7"/>. Saharan
desert dust was also found to be the major non-volatile component of ice
crystal residuals in cirrus over the Alps <xref ref-type="bibr" rid="bib1.bibx18" id="paren.8"/>. The high
ice nucleation efficiency of mineral dusts and their capacity for long-range
transport therefore make them a potentially significant component in the
formation and modification of clouds worldwide.</p>
      <p>Certain primary biological aerosol particles (PBAP) exhibit the ability to nucleate ice and it has
recently been suggested that ice-active PBAP may have evolved over geological
timescales to enhance rainfall, fostering an environment beneficial to the
growth of plants and microorganisms through the so-called bioprecipitation
feedback cycle <xref ref-type="bibr" rid="bib1.bibx34" id="paren.9"/>. A small number of bacterial strains,
fungal spores, and rusts have been identified as ice active at temperatures
warmer than <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>10 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C due to the presence of an ice nucleating
protein in the outer cell wall, which is structurally similar to ice,
facilitating ice growth <xref ref-type="bibr" rid="bib1.bibx22 bib1.bibx17 bib1.bibx20" id="paren.10"/>.
However, of the ice-active bacterial strains studied so far only a small
fraction nucleates ice at very warm temperature, e.g. <xref ref-type="bibr" rid="bib1.bibx32" id="text.11"/>
demonstrated that <italic>Pseudomonas syringae</italic> have a maximum ice-active
fraction of 0.005 at <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>9.7 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. However, they may still play
a significant role in the formation and modification of clouds; plant surface
derived bacterial aerosol can be transported to the higher levels of the
atmosphere in high concentrations as a result of heavy rainfall and storm
generated uplift <xref ref-type="bibr" rid="bib1.bibx7 bib1.bibx12 bib1.bibx21" id="paren.12"/>.</p>
      <p>The High-Altitude Research Station Jungfraujoch has hosted several intensive
measurement campaigns to study cloud–aerosol interactions
<xref ref-type="bibr" rid="bib1.bibx41 bib1.bibx3 bib1.bibx5 bib1.bibx42" id="paren.13"><named-content content-type="pre">e.g.</named-content></xref>. Previous
measurements at the site have found there to be an enhancement of mineral
dust in cloud particle residuals compared to interstitial aerosol
measurements <xref ref-type="bibr" rid="bib1.bibx23" id="paren.14"/>. This study also deployed a portable ice
nucleation chamber during June 2009, where two Saharan dust events (SDEs) were
reported. During the SDEs it was found that ice nuclei concentrations were
correlated with larger aerosol (<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 0.5 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m) with reported
deposition-mode ice nuclei concentrations of up to several hundred per litre.
This is discussed in more detail in the companion paper to this study by
<xref ref-type="bibr" rid="bib1.bibx31" id="text.15"/>. In this study, we present contemporaneous aerosol and
cloud microphysics measurements at the same site to characterise the
fluorescent constituents of aerosol and their possible role in cloud processes.</p>
</sec>
<sec id="Ch1.S2">
  <title>Methods</title>
<sec id="Ch1.S2.SS1">
  <title>Site description</title>
      <p>During January and February 2014, the Ice NUcleation Process Investigation And Quantification (INUPIAQ) project was conducted at the High-Altitude
Research Station Jungfraujoch (JFJ; 3580 m a.s.l. – above sea level;
46.55<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 7.98<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E) in Switzerland to investigate the
influence of a range of aerosol types on ice crystal number concentration
alongside secondary ice processes in natural supercooled clouds. The facility
is situated on a mountain ridge in between the peaks of the Jungfrau and
Mönch with the Great Aletsch glacier, the largest in the Alps, to the
south and is well away from major anthropogenic pollution sources. The JFJ
site is enveloped by cloud for approximately 37 % of the time making
it ideal for studying cloud–aerosol interactions, with the site residing in
the free troposphere for most of the time during the wintertime <xref ref-type="bibr" rid="bib1.bibx1 bib1.bibx19" id="paren.16"/>.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Instrumentation and inlets</title>
      <p>Fluorescent aerosol number–size distributions were measured using a Wideband Integrated Bioaerosol Spectrometer version 4 (WIBS-4; University of
Hertfordshire) on a single particle basis and designed primarily for
identifying bio-fluorphores. A full technical description can be found in
<xref ref-type="bibr" rid="bib1.bibx24" id="text.17"/>, while various applications and analysis approaches
including monitoring at high-altitude sites can be found in
<xref ref-type="bibr" rid="bib1.bibx7" id="text.18"/>, <xref ref-type="bibr" rid="bib1.bibx16" id="text.19"/>, and <xref ref-type="bibr" rid="bib1.bibx39" id="text.20"/>. A brief description
of the instrument is now given. The WIBS-4 spectrometer exploits the
principle of ultraviolet light-induced fluorescence where a particle of interest is
excited with UV radiation and the resultant fluorescence is detected, with
fluorescence being an indicator that the particle may be biological. In the
WIBS-4 aerosol is drawn into the sample volume and illuminated by
a 635 nm laser and the resultant forward scattered light is used to
determine the particle size and shape using a quadrant detector
<xref ref-type="bibr" rid="bib1.bibx24" id="paren.21"/>. Side scattered light is collected and sequentially
triggers two xenon flash lamps, filtered to excite the sampled particle at
280 and 370 nm. The first lamp is pulsed and the
resultant fluorescence is collected, filtered and passed to two fluorescence
detectors. The detectors are filtered to measure fluorescence over two
detection bands (320–400 and 410–650 nm), which are then recorded.
The second flash lamp is then triggered and the fluorescence detected by the
second band is recorded. The whole process takes approximately
25 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>s and the instrument has a maximum particle analysis rate of
125 particles s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. This provides three measurements of particle
fluorescence over two excitation wavelengths, particle size, and an
approximation of particle shape, all on a single particle basis
<xref ref-type="bibr" rid="bib1.bibx24" id="paren.22"/>. The excitation and detection wavelengths have been
selected to conform to auto-fluorescence bands of common components of
biological materials (e.g. proteins, tryptophan and Nicotinamide adenine
dinucleotide (NADH); the latter is related to cell metabolism) such that they can
be discriminated from non-biological, non-fluorescent particles
<xref ref-type="bibr" rid="bib1.bibx24" id="paren.23"/>. Due to detector sensitivity and background fluorescence
within the WIBS-4 optical chamber, the fluorescence of aerosol with diameters
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.8 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m cannot be accurately measured, and the
counting efficiency decreases <xref ref-type="bibr" rid="bib1.bibx15" id="paren.24"/>. Therefore, the analysis
presented here is limited to aerosols with diameters greater than
0.8 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m, unless otherwise stated. Whilst WIBS-4 instruments have
many advantages over traditional methods, ultraviolet – light-induced fluorescence (UV-LIF) spectrometers, limitations include
difficulties in discriminating different classes of biological particles
unambiguously and fluorescent non-biological aerosols must be identified.
Fluorescence of some mineral dusts was examined by <xref ref-type="bibr" rid="bib1.bibx37" id="text.25"/>, who
characterised their weak fluorescence properties allowing them to be
generally discriminated from common PBAP using UV-LIF. In this study we use
a new hierarchical agglomerative data processing method for WIBS-4 UV-LIF
measurements to discriminate between particle types and the methods used are
described in Sect. 4. A detailed discussion of this can be found in <xref ref-type="bibr" rid="bib1.bibx8" id="text.26"/>.</p>
      <p>The WIBS-4 sampled from a total inlet (TI), which is now described. The TI
samples all particles with <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 40 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m and for wind
speeds <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 20 m s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. The sampled air is first heated to
<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>20 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, evaporating droplets and ice crystals such that their
residuals are sampled along with any interstitial aerosol <xref ref-type="bibr" rid="bib1.bibx43" id="paren.27"/>.</p>
      <p>A custom built scanning mobility particle sizer (SMPS) has sampled
continuously from the TI since 2008. It consists of a differential mobility
analyser (DMA; TSI 3071) and a condensation particle counter (CPC; TSI 3775)
and it measures the aerosol size distribution between 20 and 600 nm
in diameter with 6 min time resolution <xref ref-type="bibr" rid="bib1.bibx19" id="paren.28"/>. This was used
to determine the origin of the sampled air masses, using the concentration of
particles larger then 90 nm in diameter as described in Sect. 3.1
and <xref ref-type="bibr" rid="bib1.bibx19" id="text.29"/>.</p>
      <p>Comprehensive cloud microphysics measurements were made at the site and are
described in <xref ref-type="bibr" rid="bib1.bibx31" id="text.30"/>. In this study, cloud droplet and ice crystal
number concentrations were measured, respectively, with a Cloud Droplet Probe
(CDP-100; Droplet Measurement Technologies; DMT), described by
<xref ref-type="bibr" rid="bib1.bibx29" id="text.31"/>, and a 3-View Cloud Particle Imager (3V-CPI). The
CDP-100 is an optical scattering spectrometer able to size particles in the
range 2 <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 50 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m, whilst the 3V-CPI is an
integrated 2-D Stereo (2DS) LED imaging spectrometer and Cloud Particle
Imaging (CPI), charge-coupled device imaging spectrometer with resolutions of 10 and
2.3 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m, respectively <xref ref-type="bibr" rid="bib1.bibx30" id="paren.32"/>. These are capable of
measuring ice particle size distributions between 10 and 1280 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m and
able to discriminate particle habit (based on shape analysis) for particles
greater than approximately 25–30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m. Details of the analysis
techniques used for these instruments are provided in <xref ref-type="bibr" rid="bib1.bibx10" id="text.33"/> and <xref ref-type="bibr" rid="bib1.bibx31" id="text.34"/>.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Results</title>
      <p>During the experiment, there were two extended SDEs (00:00 CET,
1 February–00:00 CET, 2 February and 04:30 CET, 18 February–19:00 CET,
19 February). In this paper we focus on the period outside these events in
order to characterise the behaviour of high-Alpine fluorescent aerosol under
typical wintertime background conditions. Discussion of the SDEs will be
described elsewhere; 5 min integration periods are used in all
analysis unless otherwise stated.</p>
<sec id="Ch1.S3.SS1">
  <title>Meteorological conditions</title>
      <p>An overview of the meteorological conditions at the JFJ site over the
background period 6–18 February is provided in Fig. <xref ref-type="fig" rid="Ch1.F1"/>. Average
temperatures of <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>11.3 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 4.3 and <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>14.6 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 3.3 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C were
reported for out-of-cloud and in-cloud periods, respectively, with wind speeds
of 5.2 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 3.3 m s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Daily Hybrid Single Particle Lagrangian Integrated Trajectory Model (HYSPLIT) back trajectory analysis
(Fig. <xref ref-type="fig" rid="Ch1.F2"/>) showed the majority of air masses to have passed over
the Atlantic Ocean in the preceding 72 h during this period. Analysis
of wind speed and direction shows the highest concentrations of fluorescent
aerosols occur when the wind is coming from the south-east for wind speeds in
excess of 15 m s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, i.e. coincident with flow up from the Aletsch glacier.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p>Time series of meteorological data and total water content at the
JFJ site for the period 6–18 February. Grey shaded areas denote in cloud
periods (TWC <inline-formula><mml:math display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 0.01 g m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>).</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f01.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><caption><p>Left panel: HYSPLIT back trajectories for the period 8–18 February.
Right panel: fluorescent aerosol concentration (L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) dependence on wind
speed and direction. Wind speed denoted by concentric rings (5 m s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
per ring).</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f02.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p>Time series of <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn>90</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration for the analysis period.
Dashed line denotes the 30 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> background concentration described in
<xref ref-type="bibr" rid="bib1.bibx19" id="text.35"/>; the dotted line denotes this 50 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> threshold
used to distinguish free tropospheric conditions.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f03.png"/>

        </fig>

      <p>We use the approach of <xref ref-type="bibr" rid="bib1.bibx19" id="text.36"/> to determine the origin of the
sampled air masses so that boundary layer influenced air masses can be
excluded from analysis; here we use the concentration of particles larger
than 90 nm in diameter (<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn>90</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) as described in <xref ref-type="bibr" rid="bib1.bibx19" id="text.37"/>
to distinguish periods of free tropospheric conditions from those influenced
by planetary boundary layer (PBL). They found that <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn>90</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 40 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
was a good approximation to describe free tropospheric
background aerosol across all seasons, with periods influenced by the PBL
resulting in <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn>90</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations of several hundred to
1000 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. These values were found to be lower in winter, so we use
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn>90</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 30 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> to be representative of background FT conditions
and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn>90</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 50 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> to be representative of <italic>FT-like</italic> conditions
during the sampling period as described in <xref ref-type="bibr" rid="bib1.bibx19" id="text.38"/>. A time
series of the SMPS <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn>90</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration for the analysis period is
presented in Fig. <xref ref-type="fig" rid="Ch1.F3"/> where the background FT condition of <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn>90</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 30 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
is met 66.2 % of the time and FT-like conditions where
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn>90</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 50 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> is met 88.4 % of the time. Periods with
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn>90</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 50 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, such as the extended period between 09:00 CET
15 February–09:00 CET 16 February, are excluded from analysis.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Background observations of fluorescent aerosol</title>
      <p>To assess the background conditions during the sampling period, we have
compared the aerosol data collected during the campaign to long-term
measurements made during February at the site between 2009 and 2014.
Figure <xref ref-type="fig" rid="Ch1.F4"/> shows median, 25th percentile, and 75th percentile SMPS and Optical Particle Counter (OPC) size-resolved concentration measurements made during the month of February from
2009 to 2014, which we compare to the campaign median SMPS, OPC, and WIBS
non-fluorescent and fluorescent size-resolved concentrations, where the SMPS
reports mobility diameter and the OPC and WIBS report optical diameter. It
can be seen that the campaign measurements typically lie within the range of
the 25th percentile and median values of the long-term measurements during
February at the site, suggesting that the measurement period can be
considered to be representative of the typical background aerosol
concentration at the Jungfraujoch during wintertime.</p>
      <p>The average out-of-cloud total coarse aerosol, <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>All</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, and total
fluorescent aerosol concentrations, <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>Fl</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, measured by the WIBS-4
were 30.6 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 19.3 and 6.3 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 5.7 L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively, for the period
6–18 February, as shown in Fig. <xref ref-type="fig" rid="Ch1.F5"/> (5 min averages).</p>
      <p>To investigate the potential interaction of fluorescent aerosol with clouds,
we have studied the fluorescent aerosol concentration fraction
(<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>Fl</mml:mtext></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mtext>All</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) over different temperature regimes for out-of-cloud, mixed-phase, and glaciated conditions as summarised in
Fig. <xref ref-type="fig" rid="Ch1.F6"/>. Here we define out of cloud as all periods where the
total water content (TWC) is less than 0.01 g m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, mixed phase as
all periods where the TWC <inline-formula><mml:math display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 0.01 g m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and ice mass fraction (IMF)
is less than 0.9, and glaciated as all periods where TWC <inline-formula><mml:math display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 0.01 g m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and IMF <inline-formula><mml:math display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 0.9.</p>
      <p>To test the statistical significance of these results we have performed a
one-way analysis of variance (ANOVA) analysis on subsets of the data, which we
now describe; first we assessed the influence of temperature separately for
in cloud (TWC <inline-formula><mml:math display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 0.01 g m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) and out-of-cloud (TWC <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.01 g m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) conditions where it can be seen in
Fig. <xref ref-type="fig" rid="Ch1.F6"/> that in each case the fluorescent fraction decreases with
decreasing temperature. The ANOVA analysis returns small <italic>p</italic> values
(4 <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and 1 <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for the out-of-cloud and in-cloud
cases, respectively), which indicates that the means are statistically
significantly different; however, the spread in values are large; next we
assessed the influence of the presence of cloud on fluorescent fraction at
each temperature by comparing the out-of-cloud and in-cloud cases for each
temperature regime. This shows that the fluorescent fraction is generally
increased in clouds (Fig. <xref ref-type="fig" rid="Ch1.F7"/>, top panels) with <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> values indicating
that the means are significantly different (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.05); finally we assessed
the influence of cloud type on the fluorescent fraction for each temperature
regime as shown in Fig. <xref ref-type="fig" rid="Ch1.F7"/>. Here it can be seen that the fluorescent
fractions are generally greater in mixed-phase conditions than in glaciated conditions.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p>Comparison of long-term median SMPS and OPC number–size distribution
measurements made during February 2009 to 2014 to those made during the 2014
campaign. Grey shaded area represents the quartiles of the long-term
measurements.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f04.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><caption><p>Top panel: time series of total fluorescent, <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>Fl</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, (red)
and total non-fluorescent, <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>NonFl</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, (black) aerosol concentrations
measured with the WIBS-4 sampling from the total inlet (TI). Middle panel:
liquid (cyan) and ice (blue) water contents measured with the CDP-100 and
3V-CPI-2DS. Bottom panel: temperature. Box and whiskers denote 5th, 25th,
50th, 75th, and 95th percentiles. Grey shaded areas denote in cloud periods
(TWC <inline-formula><mml:math display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 0.01 g m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>).</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f05.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><caption><p>Top panel: fluorescent to total aerosol concentration ratio for out-of-cloud (black, TWC <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.01 g m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), mixed-phase (cyan,
TWC <inline-formula><mml:math display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 0.01 g m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and IMF <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.9), and glaciated (blue,
TWC <inline-formula><mml:math display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 0.01 g m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and IMF <inline-formula><mml:math display="inline"><mml:mo>≥</mml:mo></mml:math></inline-formula> 0.9) conditions sampled with
the total inlet. Middle and bottom panels: total fluorescent, <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>F</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>,
and total non-fluorescent, <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>NonFl</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, aerosol concentrations. Box and
whiskers denote 5th, 25th, 50th, 75th, and 95th percentiles; x marker denotes
mean.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f06.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p>Top panels: influence of cloud on fluorescent fraction for the
studied temperature regimes. Bottom panels: influence of cloud type on
fluorescent fraction for the studied temperature regimes. Box and whiskers
denote 5th, 25th, 50th, 75th, and 95th percentiles; x marker denotes mean.
ANOVA one-way <italic>p</italic> values indicated at top of each panel.</p></caption>
          <?xmltex \igopts{width=284.527559pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f07.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p>Box and whisker plots of fluorescent to total aerosol concentration
ratio for cloud events persisting for at least 30 min in duration with
accompanying temperature, total water content, and ice mass fraction
measurements. Box and whiskers denote 5th, 25th, 50th, 75th, and
95th percentiles; x marker denotes mean.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f08.png"/>

        </fig>

      <p>In summary it can be seen across all temperature regimes that the average
in-cloud fluorescent aerosol fractions were slightly greater than for out-of-cloud conditions with the largest increase occurring during mixed-phase
conditions. The observed increase in the fluorescent aerosol fraction in
mixed-phase conditions is generally a result of a reduction in the
non-fluorescent aerosol concentration relative to the corresponding out-of-cloud cases, rather than an enhancement in the fluorescent aerosol
concentration. One possible explanation for this is that non-fluorescent
aerosol has been removed via Cloud Condensation Nuclei (CCN) activation and lost in precipitating
raindrops in mixed-phase clouds as this is not pronounced in the glaciated
cases; however, caution must be applied when interpreting the results of this
general approach as the differences in fluorescent aerosol fraction may be
caused by differences in the sampled air masses for each case.</p>
      <p>Figure <xref ref-type="fig" rid="Ch1.F8"/> shows the fluorescent aerosol fraction for cloud events
persisting for a minimum of 30 min in duration with mean, minimum, and
maximum observed average fluorescent aerosol fractions of 0.27 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.12,
0.05, and 0.49, respectively, over 31 separate cloud events. It can be seen that many
of the clouds feature large variations in fluorescent aerosol fraction, while
others have relatively little variation, which may be an effect of sampling
several different air masses during a single cloud event. The correlation
between mean and median fluorescent aerosol fraction and the following
meteorological and cloud microphysical parameters were investigated: IMF, TWC, ice water content (IWC), liquid
water content (LWC), ice and droplet concentrations, temperature, and wind speed
and direction. A scatter plot of the mean (black <inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>) and median (red diamonds)
values for each cloud event is shown in Fig. <xref ref-type="fig" rid="Ch1.F9"/>, along with the
corresponding <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> value where no significant correlation between
parameters is observed. No apparent trend is observed between the fluorescent
aerosol fractions and contemporaneous mean meteorological or cloud
microphysical parameters, suggesting that particle fluorescence does not
impact cloud evolution or formation.</p>
      <p>The majority of cloud events occur in the <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>15 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C <inline-formula><mml:math display="inline"><mml:mo>≤</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>10 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C
regime: Fig. <xref ref-type="fig" rid="Ch1.F10"/> shows the average fluorescent
and non-fluorescent particle size distributions for out-of-cloud,
mixed-phase,
and glaciated conditions in this temperature regime. In each case the single
mode of the distribution occurs at 0.58 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m; however, the counting
efficiency for particles <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.8 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m is low
<xref ref-type="bibr" rid="bib1.bibx15" id="paren.39"/>, so the true mode is likely to be much smaller when measured
with, e.g., an SMPS as indicated in Fig. <xref ref-type="fig" rid="Ch1.F4"/>.</p>
      <p>Figure <xref ref-type="fig" rid="Ch1.F11"/> shows the size dependence of the fluorescent aerosol
fraction for the three studied temperature regimes for out-of-cloud, mixed-phase, and glaciated conditions. In each case, it was observed that the
fluorescent aerosol fraction increases with size, with approximately
80 % of 10 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m particles being fluorescent in nature,
with the fluorescent aerosol fraction decreasing to approximately
20 % for 1 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m particles. Caution must be applied when
interpreting the sub-micron fluorescent aerosol fraction due to the reduced
fluorescent counting efficiency for particles <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>D</mml:mi><mml:mtext>p</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.8 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m
<xref ref-type="bibr" rid="bib1.bibx15" id="paren.40"/>, which may lead to an underestimation of the fluorescent
aerosol fraction at small sizes. For clarity and ease of comparison only the
mean ratios for each case are presented here. Individual plots for each case
showing the mean and standard deviation of the fluorescent ratio are provided
as a Supplement.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><caption><p>Correlation scatter plot of the fluorescent aerosol fraction to ice
mass fraction (IMF); total water content (TWC), ice water content (IWC),
liquid water content (LWC), ice crystal and droplet number concentrations,
temperature, and wind speed and direction for cloud events persisting for at
least 30 min in duration. Mean values are denoted by black <inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> symbols and
median values by red diamonds.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f09.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10" specific-use="star"><caption><p>WIBS Non-fluorescent (top panels) and fluorescent particle size
distributions (bottom panels) for (left to right panels) out-of-cloud (OOC),
mixed-phase, and glaciated conditions over the temperature range
<inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>15 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C <inline-formula><mml:math display="inline"><mml:mo>≤</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> C. Solid line is mean,
dashed line is median; 5th to 95th percentiles and interquartile range shown
with light and dark grey areas, respectively.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f10.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11" specific-use="star"><caption><p>Size-dependent fluorescent aerosol fractions for (left to right
panels) out-of-cloud (black), mixed-phase (cyan), and glaciated conditions
(blue) over the three different temperature regimes studied.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f11.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12"><caption><p>Mean cluster centres for the three cluster solution using Ward linkage
and Calinski–Harabasz metric. Clusters contribute 25, 70, and 5 %
to the fluorescent particle population.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/2273/2016/acp-16-2273-2016-f12.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S4">
  <title>Analysis of fluorescent aerosol characteristics</title>
      <p>To probe the nature of the fluorescent aerosols, the single particle data from
the period 6–18 February (approximately 27 000 fluorescent particles) were
clustered using the Ward hierarchical agglomerative cluster analysis linkage
and <inline-formula><mml:math display="inline"><mml:mi>Z</mml:mi></mml:math></inline-formula>-score normalisation technique with the log of the diameter and
particle asymmetry factors (AF) used to improve the symmetry of the cluster
distribution. For further details on the hierarchical agglomerative cluster
analysis method used here see <xref ref-type="bibr" rid="bib1.bibx8" id="text.41"/>. The Calinski–Harabasz
metric was used to determine the optimum cluster solution to retain,
returning a three-cluster solution as shown in Fig. <xref ref-type="fig" rid="Ch1.F12"/>. Clusters 1
and 2 were the dominant clusters, both of which display weak fluorescence,
which is characteristic of mineral dust <xref ref-type="bibr" rid="bib1.bibx37" id="paren.42"/>. The sum of
particle concentrations from both clusters 1 and 2 correlated well with the
total fluorescent particle concentration ((<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mrow><mml:mtext>cl1</mml:mtext><mml:mo>+</mml:mo><mml:mtext>cl2</mml:mtext></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.3 <inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.94 <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>Fl</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.99) with campaign average
concentrations of 1.7 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 3.3 and 4.9 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 8.8 L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively.
Cluster 3 displayed significantly higher fluorescence in all three channels
suggesting that this was likely representative of biological material
<xref ref-type="bibr" rid="bib1.bibx7" id="paren.43"/>. However, periods during which cluster 3 particles
appeared were sparse with typical average concentrations over the period of
0.1 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.4 L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> observed. Very occasional episodic events with
maximum concentrations reaching the order of a few per litre were observed.
We would expect low concentrations of local PBAP in the wintertime at this
site due to reduced surface sources of seasonal PBAP coupled with an annual
minimum in PBL height <xref ref-type="bibr" rid="bib1.bibx25 bib1.bibx4 bib1.bibx35" id="paren.44"/>.</p>
      <p>In summary, the majority of fluorescent aerosol sampled at the site during
these periods is likely non-biological in nature with only minor episodic
contributions from bioaerosols. Such low concentrations of PBAP are unlikely
to have any significant impact on cloud evolution through primary ice
nucleation alone due to the low ice-active fractions reported for typical
PBAP; e.g. if the cluster was representative of <italic>Pseudomonas syringae</italic>
<xref ref-type="bibr" rid="bib1.bibx32" id="paren.45"/> this would yield an IN concentration of only
5 <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
which is several orders of magnitude less than the
reported ice crystal concentration <xref ref-type="bibr" rid="bib1.bibx31" id="paren.46"/>; however, we can only
speculate on the source of this cluster and this is used as an illustrative
example only. Low concentrations of primary ice may cause glaciation via
secondary mechanisms such as the Hallet–Mossop (HM) process and
Wegener–Bergeron–Findeisen (WBF) process (e.g. <xref ref-type="bibr" rid="bib1.bibx6" id="altparen.47"/>), which we
now discuss in relation to this study; In this study secondary ice production
via the HM process was ruled out as the clouds observed were rarely within
the active temperature range for this process as discussed in the
<xref ref-type="bibr" rid="bib1.bibx31" id="text.48"/> companion study; a second companion study by
<xref ref-type="bibr" rid="bib1.bibx14" id="text.49"/> investigated the potential influence of the WBF
process at the site where they found that the critical updraft speed (as
defined by <xref ref-type="bibr" rid="bib1.bibx27 bib1.bibx28" id="altparen.50"/>) to maintain mixed-phase conditions was less than the observed updraft velocity for the majority
of the INUPIAQ campaign using the ice 2D-S size distribution as the input for
the <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>i</mml:mtext></mml:msub><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msub><mml:mi>r</mml:mi><mml:mtext>i</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> term, as such they concluded that glaciation via the WBF process
was not significant. Reducing the <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mtext>i</mml:mtext></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msub><mml:mi>r</mml:mi><mml:mtext>i</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> term to the typical bio-IN primary
ice concentrations observed would reduce this critical threshold such that it
would be significantly less than the observed updrafts.</p>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <title>Summary and conclusions</title>
      <p>Analysis of 288 h of contemporaneous aerosol fluorescence and cloud
microphysics measurements made during wintertime background conditions at
a high-Alpine site revealed that the majority of aerosol sampled with
a WIBS-4 UV-LIF spectrometer were non-fluorescent with only 27 % of
the aerosol displaying fluorescence. We investigated the potential links
between aerosol fluorescence and cloud microphysics both in general and for
31 individual cloud events persisting for at least 30 min and we
report that there was no apparent link between the fluorescent aerosol
fraction and observed cloud microphysical parameters and meteorology,
suggesting that aerosol fluorescence did not influence cloud
formation/evolution at the site during the measurement period.</p>
      <p>We observed that particle fluorescence is a strong function of size with
80 % of 10 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m particles displaying fluorescence,
decreasing to 20 % at 1 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m. Hierarchical agglomerative
cluster analysis of the fluorescent particles yielded a three-cluster
solution: two of the clusters displayed fluorescent characteristics
consistent with fluorescent mineral dust and these clusters accounted for
approximately 95 % of the observed fluorescent particles. The
remaining cluster was moderately fluorescent in all three channels and is
assumed to be biological in origin. Concentrations of the assumed PBAP
cluster were sparse, occurring in occasional minor episodes with a baseline
concentration of 0.1 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.4 L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>. Given the low concentration of
this cluster and the typically low ice-active fraction of studied PBAP
(e.g. <italic>Pseudomonas syringae</italic>; <xref ref-type="bibr" rid="bib1.bibx32" id="altparen.51"/>), we suggest that the
contribution to the observed ice crystal concentration at this location is
not significant during the wintertime. Analysis of wind speed and direction
suggests that large emissions from sources from the Po Valley region may
advect up the Aletsch glacier during periods of high wind speed, which may be
of significance during the summer when the PBL is higher. We suggest that
longer-term data sets are required to examine this in detail.</p>
</sec>

      
      </body>
    <back><app-group>
        <supplementary-material position="anchor"><p><bold>The Supplement related to this article is available online at <inline-supplementary-material xlink:href="http://dx.doi.org/10.5194/acp-16-2273-2016-supplement" xlink:title="pdf">doi:10.5194/acp-16-2273-2016-supplement</inline-supplementary-material>.</bold><?xmltex \hack{\vspace*{-6mm}}?></p></supplementary-material>
        </app-group><ack><title>Acknowledgements</title><p>This work was funded by the NERC INUPIAQ programme, grant
number NE/K006002/1. The data used in this manuscript can be accessed from
the British Atmospheric Data Centre. HYPLIT data were obtained from the NOAA
Air Resource Laboratory (<uri>http://ready.arl.noaa.gov/</uri>). We would like to
thank the International Foundation High-Altitude Research Stations
Jungfraujoch and Gornergrat (HFSJG) for providing the support in carrying out
experiments at Jungfraujoch and the ACTRIS-TNA project for contributing
towards the project infrastructure. Aerosol monitoring is supported by
MeteoSwiss in the framework of the Global Atmosphere Watch (GAW) programme.
Further funding was provided by FP7 project BACCHUS (grant agreement
no. 603445). C. Hoyle was funded by the Swiss National Science Foundation,
SNSF grant number 200021_140663. <?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: B. Ervens</p></ack><ref-list>
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    </app></app-group></back>
    <!--<article-title-html>Observations of fluorescent aerosol–cloud interactions in the free troposphere at the High-Altitude Research Station Jungfraujoch</article-title-html>
<abstract-html><p class="p">The fluorescent nature of aerosol at a high-altitude Alpine site was studied using a
wide-band integrated bioaerosol (WIBS-4) single particle multi-channel ultraviolet – light-induced fluorescence (UV-LIF) spectrometer. This was supported
by comprehensive cloud microphysics and meteorological measurements with the
aims of cataloguing concentrations of bio-fluorescent aerosols at this high-altitude site and also investigating possible influences of UV–fluorescent
particle types on cloud–aerosol processes.</p><p class="p">Analysis of background free tropospheric air masses, using a total aerosol
inlet, showed there to be a minor increase in the fluorescent aerosol
fraction during in-cloud cases compared to out-of-cloud cases. The size
dependence of the fluorescent aerosol fraction showed the larger aerosol to
be more likely to be fluorescent with 80 % of 10 µm particles
being fluorescent. Whilst the fluorescent particles were in the minority
(<i>N</i><sub>Fl</sub>∕<i>N</i><sub>All</sub>  =  0.27 ± 0.19), a new hierarchical
agglomerative cluster analysis approach, <cite class="cite"/> revealed the
majority of the fluorescent aerosols were likely to be representative of
fluorescent mineral dust. A minor episodic contribution from a cluster likely
to be representative of primary biological aerosol particles (PBAP) was also
observed with a wintertime baseline concentration of
0.1 ± 0.4 L<sup>−1</sup>. Given the low concentration of this cluster and
the typically low ice-active fraction of studied PBAP
(e.g. <i>pseudomonas syringae</i>), we suggest that the contribution to the
observed ice crystal concentration at this location is not significant during
the wintertime.</p></abstract-html>
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