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  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">ACP</journal-id>
<journal-title-group>
<journal-title>Atmospheric Chemistry and Physics</journal-title>
<abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1680-7324</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-16-11521-2016</article-id><title-group><article-title>Case studies of the impact of orbital sampling on stratospheric trend detection and derivation of tropical vertical velocities: solar occultation vs. limb emission sounding</article-title>
      </title-group><?xmltex \runningtitle{Orbital sampling: solar occultation vs. limb emission}?><?xmltex \runningauthor{L.~F.~Mill\'{a}n et~al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Millán</surname><given-names>Luis F.</given-names></name>
          <email>lmillan@jpl.nasa.gov</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Livesey</surname><given-names>Nathaniel J.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Santee</surname><given-names>Michelle L.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Neu</surname><given-names>Jessica L.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff3">
          <name><surname>Manney</surname><given-names>Gloria L.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Fuller</surname><given-names>Ryan A.</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>New Mexico Institute of Mining and Technology, Socorro, New Mexico, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>NorthWest Research Associates, Redmond, Washington, USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Luis F. Millán (lmillan@jpl.nasa.gov)</corresp></author-notes><pub-date><day>16</day><month>September</month><year>2016</year></pub-date>
      
      <volume>16</volume>
      <issue>18</issue>
      <fpage>11521</fpage><lpage>11534</lpage>
      <history>
        <date date-type="received"><day>26</day><month>April</month><year>2016</year></date>
           <date date-type="rev-request"><day>9</day><month>May</month><year>2016</year></date>
           <date date-type="rev-recd"><day>16</day><month>August</month><year>2016</year></date>
           <date date-type="accepted"><day>29</day><month>August</month><year>2016</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/3.0/">http://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016.html">This article is available from https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016.html</self-uri>
<self-uri xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016.pdf</self-uri>


      <abstract>
    <p>This study investigates the representativeness of two types of orbital
sampling applied to stratospheric temperature and trace gas fields. Model
fields are sampled using real sampling patterns from the Aura Microwave Limb
Sounder (MLS), the HALogen Occultation Experiment (HALOE) and the Atmospheric
Chemistry Experiment Fourier Transform Spectrometer (ACE-FTS). The MLS
sampling acts as a proxy for a dense uniform sampling pattern typical of limb
emission sounders, while HALOE and ACE-FTS represent coarse nonuniform
sampling patterns characteristic of solar occultation instruments. First,
this study revisits the impact of sampling patterns in terms of the sampling
bias, as previous studies have done. Then, it quantifies the impact of
different sampling patterns on the estimation of trends and their associated
detectability. In general, we find that coarse nonuniform sampling patterns
may introduce non-negligible errors in the inferred magnitude of temperature
and trace gas trends and necessitate considerably longer records for their
definitive detection. Lastly, we explore the impact of these sampling
patterns on tropical vertical velocities derived from stratospheric water
vapor measurements. We find that coarse nonuniform sampling may lead to a
biased depiction of the tropical vertical velocities and, hence, to a biased
estimation of the impact of the mechanisms that modulate these velocities.
These case studies suggest that dense uniform sampling such as that available
from limb emission sounders provides much greater fidelity in detecting
signals of stratospheric change (for example, fingerprints of greenhouse gas
warming and stratospheric ozone recovery) than coarse nonuniform sampling
such as that of solar occultation instruments.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p>Satellite
data have provided a wealth of information on the Earth system and have had a
profound impact on operational numerical weather forecasting. Unlike
ground-based instruments or airborne field campaigns, satellite data provide
continuous global coverage, which facilitates the study and assimilation of
distributions of atmospheric fields, as well as global model evaluation.
However, satellite measurements sample continuously changing atmospheric
fields only at discrete times and locations, depending on the satellite orbit
as well as the measurement technique, which can result in a biased depiction
of the atmospheric field.</p>
      <p>Typically, the impact of orbital sampling has been evaluated by comparing a
raw model field against a satellite-sampled one. For example, many studies
have documented sampling errors for rainfall estimates
<xref ref-type="bibr" rid="bib1.bibx27 bib1.bibx34 bib1.bibx3 bib1.bibx41 bib1.bibx16" id="paren.1"><named-content content-type="pre">e.g.,</named-content></xref> and brightness temperatures <xref ref-type="bibr" rid="bib1.bibx12 bib1.bibx6" id="paren.2"/>, as well as O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, CO, temperature and a few other atmospheric
parameters sampled by nadir-viewing instruments <xref ref-type="bibr" rid="bib1.bibx25 bib1.bibx1 bib1.bibx17" id="paren.3"/>. Recently, <xref ref-type="bibr" rid="bib1.bibx44" id="text.4"/> evaluated the sampling bias in
monthly and annual mean climatologies of O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O from 16 satellite
instruments, including limb emission sounders, limb scattering sounders,
solar occultation instruments and a stellar occultation instrument. They
concluded that coarse sampling may introduce significant sampling
uncertainties in climatologies, not only through nonuniform spatial sampling
but, more importantly, through nonuniform temporal sampling, that is to say,
producing regional monthly means using measurements that do not cover the
entire month. As expected, the sampling bias was found to be the greatest in
regions with large natural variability.</p>
      <p>In this study we further evaluate the impact of the Aura Microwave Limb
Sounder (MLS), the HALogen Occultation Experiment (HALOE) and the Atmospheric
Chemistry Experiment Fourier Transform Spectrometer (ACE-FTS) sampling
patterns using the Canadian Middle Atmosphere Model (CMAM). MLS sampling
provides a dense uniform pattern, while HALOE and ACE-FTS are representative
of coarser solar occultation sampling patterns. We use HALOE and ACE-FTS
sampling patterns because they are commonly used solar occultation datasets
and, furthermore, because their sampling patterns are significantly
different and thus representative of the range of observation patterns
obtained by solar occultation instruments.</p>
      <p>Our study has two purposes. (1) We expand upon previous studies by
quantifying the sampling bias of these instruments affecting measurements of
upper tropospheric and stratospheric temperature and trace gas species.
(2) We investigate how differences in data coverage may affect the outcome of
two illustrative atmospheric studies: trend detection and quantification of
tropical vertical velocities. We assess the differences in the long-term
(<inline-formula><mml:math display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 30 years) trends in temperature, O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and CO estimated using datasets
with different sampling patterns. Also, we characterize the impact of orbital
sampling on derived lower-stratospheric tropical vertical velocities. These
velocities are computed by correlating the lag of the water vapor “tape
recorder” signal between adjacent levels <xref ref-type="bibr" rid="bib1.bibx33 bib1.bibx14 bib1.bibx21" id="paren.5"/>. As such, they are likely an upper bound on the actual velocity
<xref ref-type="bibr" rid="bib1.bibx37" id="paren.6"/>. These vertical velocities are modulated by the
quasi-biennial oscillation (QBO), seasonal cycles and El Niño–Southern
Oscillation (ENSO) <xref ref-type="bibr" rid="bib1.bibx15 bib1.bibx32 bib1.bibx30" id="paren.7"><named-content content-type="pre">e.g.,</named-content></xref>.</p>
      <p>This paper is organized as follows: Sect. <xref ref-type="sec" rid="Ch1.S2"/> describes the
satellite patterns and the model fields used. Section <xref ref-type="sec" rid="Ch1.S3"/> briefly
revisits sampling bias estimates, while the impact of sampling on the
estimation of long-term trends as well as on trend detection is presented in
Sect. <xref ref-type="sec" rid="Ch1.S4"/>. Section <xref ref-type="sec" rid="Ch1.S5"/> addresses the impact of
orbital sampling on derived tropical vertical velocities, and
Sect. <xref ref-type="sec" rid="Ch1.S6"/> summarizes our results. The results discussed in this
study should be considered as example cases. Whether the results shown
represent reasonable estimates of the true orbital-sampling-induced artifacts
(e.g., in the sampling bias, in the inferred magnitude of the trends or in
the derived tropical vertical velocities) may also depend on how well the
model fields represent the real atmosphere.</p>
</sec>
<sec id="Ch1.S2">
  <title>Data and methodology</title>
<sec id="Ch1.S2.SS1">
  <title>Model fields</title>
      <p>CMAM is used as a proxy for the real atmosphere. CMAM is an extension of the
Canadian Center for Climate Modeling and Analysis spectral general
circulation model. Detailed descriptions of its dynamical and chemical
schemes are given by <xref ref-type="bibr" rid="bib1.bibx2" id="text.8"/> and <xref ref-type="bibr" rid="bib1.bibx10" id="text.9"/>,
respectively. The free-running version of the model has been extensively
evaluated and has been shown to agree relatively well with observations
relevant to chemistry, dynamics, transport and radiation
<xref ref-type="bibr" rid="bib1.bibx10 bib1.bibx13 bib1.bibx18 bib1.bibx29 bib1.bibx22 bib1.bibx23" id="paren.10"><named-content content-type="pre">e.g.,</named-content></xref>.</p>
      <p>In this study we use output from the CMAM30 Specified Dynamics (SD)
simulation in which temperature and winds have been nudged to the ERA-Interim
reanalysis. This dataset exploits the vast progress made by reanalyses in
representing the stratospheric circulation <xref ref-type="bibr" rid="bib1.bibx9" id="paren.11"><named-content content-type="pre">e.g.,</named-content></xref> and as
such can be used to reliably predict the chemical fields. Before nudging the
temperature fields, a technique described by <xref ref-type="bibr" rid="bib1.bibx28" id="text.12"/> was used
to remove temporal discontinuities in the ERA-Interim upper-stratospheric
temperatures that occurred in 1985 and 1998. CMAM30-SD has been shown to have
a good representation of stratospheric temperature, O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>
<xref ref-type="bibr" rid="bib1.bibx35" id="paren.13"/>; it has been used as a transfer function between
satellite datasets to construct a reliable long-term H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O data record
<xref ref-type="bibr" rid="bib1.bibx19" id="paren.14"/>, and it has been shown to reproduce halogen-induced
midlatitude O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> loss sufficiently well for investigation of long-term
O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> trends <xref ref-type="bibr" rid="bib1.bibx38" id="paren.15"/>. The version of CMAM30-SD used here has a
horizontal resolution of approximately 3.75<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitude by
3.75<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> longitude. This resolution (approximately 400 km) is
comparable to the horizontal resolution of HALOE, ACE-FTS and MLS, which is
limited by the <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 500 km limb-viewing path length, and, hence, no
smoothing of the model fields is necessary <xref ref-type="bibr" rid="bib1.bibx44" id="paren.16"/>. This version
has 63 vertical levels up to 0.0007 hPa with a vertical resolution varying
from 100 m in the lower troposphere to about 3 km in the mesosphere. Model
results for the period between January 1979 and December 2012 are used in
this study.</p>
      <p>We evaluate the following CMAM30-SD outputs: temperature, O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>Cl,
H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O, CO, HCl, N<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and HNO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>. These parameters are an intersection of
the available CMAM30-SD outputs, the measurements available for MLS and the
measurements available for ACE-FTS or HALOE.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Satellite instrument sampling patterns</title>
      <p>In this study we analyze the representativeness of the orbital sampling of
the solar occultation instruments HALOE and ACE-FTS, as well as the limb
emission sounder MLS. Solar occultation data are extremely valuable for
atmospheric studies due to their fine vertical resolution, the excellent
precision and accuracy of their self-calibrated measurements, and their
potential for detecting many species. However, the sparsity of the
measurements makes understanding the impact of their sampling crucial.</p>
      <p>HALOE was launched on the Upper Atmosphere Research Satellite (UARS) in 1991,
and it measured infrared spectra across eight broadband and gas filter
channels from 2.45 to 10.04 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m for 14 years. It measured vertical
profiles of temperature, pressure and several atmospheric trace gases, with
as many as 15 sunrise and 15 sunset profiles of these atmospheric parameters
observed at a given latitude each day <xref ref-type="bibr" rid="bib1.bibx36" id="paren.17"/>. The HALOE sampling
sweeps through its full range of latitude coverage, ranging from <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>80 to
<inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>50<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> depending on the season, over a period of about 1 month. The
vertical resolution of this dataset is about 2–3 km.</p>
      <p>ACE-FTS was launched in 2003 and profiles the atmosphere by using solar
occultation. It measures infrared spectra from 2.2 to 13.3 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m (750
to 4400 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) with high spectral sampling (0.02 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), which
allows the retrieval of temperature, pressure and concentration for several dozen
atmospheric trace gases <xref ref-type="bibr" rid="bib1.bibx4" id="paren.18"/>. ACE-FTS is focused on
high-latitude science, and thus almost 50 % of its approximately 15
sunrise and 15 sunset occultations per day occur at latitudes around
60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>. Global latitude coverage is achieved over a period of
approximately 3 months. The vertical resolution of this dataset is about
3 km.</p>
      <p>Aura MLS was launched in 2004 and measures limb millimeter and submillimeter
atmospheric thermal emission using heterodyne radiometers covering spectral
regions near 118, 191, 240 and 640 GHz and 2.5 THz, from which temperature,
trace gas concentrations and cloud ice are retrieved. Daily, it covers
latitudes from 82<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S to 82<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N with <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3500 vertical
scans providing near-global observations. The vertical resolution of this
dataset varies among species; O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and HCl have a <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 km
resolution in the stratosphere, and CO, CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>Cl, HNO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and N<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O have a
4–8 km resolution in the stratosphere <xref ref-type="bibr" rid="bib1.bibx24" id="paren.19"/>.</p>
      <p>To investigate the impact of orbital sampling, the daily model fields are
linearly interpolated to the actual latitude and longitude of the satellite
measurements. For the sampling patterns, we use a typical year of measurement
locations. In particular, we use 1994 and 2005 for HALOE and ACE-FTS,
respectively; these are the years with the maximum number of measurements on
record for each dataset. For MLS, we use 2008 as a representative year. Gaps
in the measurements due to instrument problems as well as year-to-year
variations due to orbital state changes are not considered in this study. To
avoid differences attributed purely to diurnal cycles, all satellite
measurements are assumed to be made at 12:00 UT, obviating the need for
interpolation in time. Thus, we focus on spatial differences. Given that our
focus is on horizontal/temporal sampling, all satellite measurements are
assumed to have vertical resolution comparable to that of CMAM30-SD; however,
we want to emphasize that the vertical resolution of these instruments is in
general good enough to resolve the model fields. That is, although the impact
of the averaging kernels is not addressed in this study, for the parameters
studied here a 3 km averaging kernel does not significantly affect their
values in the upper troposphere/stratosphere.</p>
      <p>Figure <xref ref-type="fig" rid="Ch1.F1"/> (left) shows monthly sampling counts for each
instrument. MLS has a dense and nearly uniform sampling over latitude and
time, while HALOE and ACE-FTS have sparser and less uniform sample densities
because they are limited to two measurements per orbit.
Figure <xref ref-type="fig" rid="Ch1.F1"/> (right) shows the zonal mean water vapor field
at 100 hPa as sampled by each instrument to highlight how much daily
variability may be missed by the HALOE and ACE-FTS sampling patterns. The
consequences of these contrasting sampling densities are the main motivation
for this study. As discussed by <xref ref-type="bibr" rid="bib1.bibx26" id="text.20"/>, mapping data into
vortex-centered coordinate systems such as those based on potential vorticity
(PV) or equivalent latitude (EqL) may alleviate some of the solar occultation
sampling density problems for polar processing studies. However, since this
study focuses on near-global trends and tropical upwelling velocities, such
vortex-centered coordinate systems are of very limited utility here.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><caption><p>Left: monthly sampling counts for MLS, HALOE and ACE-FTS, in
4<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitude bins. Note the nonuniform color bar increments. Right: zonal mean water vapor at 100 hPa as sampled by MLS, HALOE and ACE-FTS for
individual days. White regions denote a lack of measurements.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f01.pdf"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S3">
  <title>Sampling biases</title>
      <p>We evaluate the sampling biases associated with constructing monthly zonal
means from the raw and satellite-sampled data. The raw or sampled zonal means
for a particular latitude bin for each pressure level are given by
          <disp-formula id="Ch1.E1" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>Z</mml:mi><mml:mi>l</mml:mi><mml:mi>x</mml:mi></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mi>N</mml:mi></mml:mfrac></mml:mstyle><mml:mo movablelimits="false">∑</mml:mo><mml:msubsup><mml:mi>y</mml:mi><mml:mi>l</mml:mi><mml:mi>x</mml:mi></mml:msubsup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> is the total number of points, <inline-formula><mml:math display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula>, belonging to a latitude bin <inline-formula><mml:math display="inline"><mml:mi>l</mml:mi></mml:math></inline-formula>
and <inline-formula><mml:math display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> is a placeholder variable for either the raw data, denoted by the
superscript r, or the sampled data, denoted by the superscript s.
Figure <xref ref-type="fig" rid="Ch1.F2"/> shows examples of raw and sampled zonal means for
temperature, O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O. The difference between the satellite-sampled
zonal mean and the raw zonal mean gives the absolute sampling bias, that is
to say,</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p>January 2005 zonal means as a function of pressure for temperature,
O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O (top to bottom) in 4<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitude bins. Left column is
raw CMAM30-SD model fields; other columns are CMAM30-SD as sampled by MLS,
HALOE and ACE-FTS (left to right), respectively. White regions denote a lack
of measurements.</p></caption>
        <?xmltex \igopts{width=233.312598pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f02.pdf"/>

      </fig>

      <p><disp-formula id="Ch1.E2" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mtext>A</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>Z</mml:mi><mml:mi>l</mml:mi><mml:mtext>s</mml:mtext></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>Z</mml:mi><mml:mi>l</mml:mi><mml:mtext>r</mml:mtext></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow></mml:math></disp-formula>
        or, in percentage,
          <disp-formula id="Ch1.E3" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msub><mml:mi>S</mml:mi><mml:mtext>P</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>Z</mml:mi><mml:mi>l</mml:mi><mml:mtext>s</mml:mtext></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>Z</mml:mi><mml:mi>l</mml:mi><mml:mtext>r</mml:mtext></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mrow><mml:mover accent="true"><mml:mrow><mml:msubsup><mml:mi>Z</mml:mi><mml:mi>l</mml:mi><mml:mtext>r</mml:mtext></mml:msubsup></mml:mrow><mml:mo mathvariant="normal">‾</mml:mo></mml:mover></mml:mfrac></mml:mstyle><mml:mo>×</mml:mo><mml:mn>100.</mml:mn></mml:mrow></mml:math></disp-formula>
        Figure <xref ref-type="fig" rid="Ch1.F3"/> shows examples of the sampling biases for temperature,
O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O for January 2005 CMAM30-SD fields. Relative biases are shown
for trace gas species to accommodate their strong vertical gradients. These
biases only display the impact of sampling the CMAM30-SD fields; as mentioned
before, how well these biases represent the true atmospheric sampling biases
will depend on how close the model fields are to the real atmospheric state.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p>January 2005 sampling bias as a function of latitude and pressure
for temperature, O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O (top to bottom) as measured using MLS,
HALOE and ACE-FTS sampling patterns (left to right). White regions denote a
lack of measurements. </p></caption>
        <?xmltex \igopts{width=233.312598pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f03.pdf"/>

      </fig>

      <p>For each month, instrument and pressure level, this bias was computed for
all the latitude bins in which an instrument was able to sound the
atmosphere. To summarize the potential sampling biases, we computed
root-mean-square (RMS) biases over 1 year's worth of data. As an example,
Fig. <xref ref-type="fig" rid="Ch1.F4"/> shows these calculated RMS sampling biases for
temperature, O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O for 2005. Overall, there is a direct
correlation between the sampling biases and the variability of the
geophysical parameters. For example, as noted by <xref ref-type="bibr" rid="bib1.bibx44" id="text.21"/>, O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>
sampling biases for the three instruments are smaller in the tropics and
larger at midlatitudes and in the polar regions, where variability is
low or high, respectively. However, the biases in all regions are minimized by
dense uniform sampling such as that of MLS.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p>Root-mean-square sampling bias for 2005 as a function of latitude
and pressure for temperature, O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O (top to bottom) as measured
using MLS, HALOE and ACE-FTS sampling patterns (left to right). White regions
denote a lack of measurements. </p></caption>
        <?xmltex \igopts{width=233.312598pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f04.pdf"/>

      </fig>

      <p>Figure <xref ref-type="fig" rid="Ch1.F5"/> shows the mean and maximum sampling biases over all
latitudes for the model year 2005 for all the atmospheric parameters studied.
In general, HALOE and ACE-FTS sampling patterns produce mean and maximum
sampling biases 1 order of magnitude larger than those of MLS. For example,
for the occultation sensors, the temperature maximum sampling biases are
about 10 K compared to 1 K for MLS. Similarly, in the middle stratosphere,
H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O maximum sampling biases for the solar occultation instruments can be
as large as 5 % compared to less than 1 %, and lastly, HNO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>
maximum sampling biases can be as large as 50 % compared to less than
5 %.</p>
</sec>
<sec id="Ch1.S4">
  <title>Long-term trends</title>
      <p>We now evaluate the impact of orbital sampling on the representation of
long-term trends. Accurate representation of long-term trends is crucial
because they are indicators of climate change, as well as ozone recovery. To
summarize the effect of the orbital sampling upon long-term trends we use
Taylor diagrams <xref ref-type="bibr" rid="bib1.bibx42" id="paren.22"/>, which provide a convenient method for
visualizing statistics of how closely patterns match each other; in this
case, they are used to depict the success of the satellite-sampled data in
representing the variability found in the raw model fields. The similarity is
quantified by their correlation coefficient, their centered RMS difference
(RMSd) and their standard deviations. Simply, the centered RMSd is the RMS of
the differences between the two anomaly time series.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p>Mean (thin lines) and maximum (thicker lines) RMS sampling bias over
all latitudes for 2005 as a function of pressure for temperature (in Kelvin),
O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>Cl, H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O, CO, HCl, N<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and HNO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> in percent. The vertical
grid indicates values of 0.5, 1, 5, 10, 50 and 100. </p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f05.pdf"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><caption><p>Taylor diagrams showing near-global (60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S to
60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) long-term (1979–2012) pattern comparisons between the raw
(the reference point at (1,0)) and the satellite-sampled data at different
pressure levels. The green contours indicate the normalized RMS difference
values. </p></caption>
        <?xmltex \igopts{width=298.753937pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f06.pdf"/>

      </fig>

      <p>In the diagrams shown, all data are normalized to the raw model standard
deviation to facilitate showing different pressure levels in the same figure.
In these diagrams, there are four things to consider: (1) the azimuth angle
indicates the correlation between the satellite-sampled and raw data; (2) the
point with normalized standard deviation of 1 and correlation of 1 is the
reference point and corresponds to the raw model data; (3) the distance
between any point in the figure and the reference point indicates the ratio
of the centered RMSd and the raw model standard deviation (green contours);
and (4) the distance between other points in the plot and the origin is the
ratio between the satellite-sampled standard deviation and that of the raw
model field.</p>
      <p>Near-global (60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) long-term (1979–2012) patterns
are compared between satellite-sampled and raw model fields in
Fig. <xref ref-type="fig" rid="Ch1.F6"/> for all the atmospheric parameters
evaluated in this study. Means were computed by averaging all data available
between 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S with no effort to use only
latitudes where the satellites sampled. This approach was taken to show the
representativeness of near-global patterns. We did not expand this study to
the latitudes poleward of 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N or 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S because ACE-FTS
does not sample these areas for 4 months per calendar year and HALOE does
not sample for 5 and 6 months at the South and North Pole, respectively (see
Fig. <xref ref-type="fig" rid="Ch1.F1"/>). Figure <xref ref-type="fig" rid="Ch1.F7"/> shows the raw model
standard deviations used to normalize these diagrams (black lines). Overall,
the MLS-sampled data (circles in Fig. <xref ref-type="fig" rid="Ch1.F6"/>) for all
variables and all pressure levels are close to the reference point,
indicating high correlation coefficients, low centered RMSd and the expected
standard deviation (i.e., a standard deviation similar to that of the full
model fields). The HALOE-sampled data (triangles) show intermediate
performance, followed by the ACE-FTS-sampled data (squares), which show the
weakest correlation and the largest normalized standard deviation. For
example, this is easily seen in the CO Taylor diagram, where the MLS-sampled
points all cluster tightly at the reference point, whereas HALOE-sampled
points lie farther away and ACE-FTS-sampled points the farthest.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><caption><p>Raw model standard deviations used to normalize the Taylor diagrams
shown in Figs. <xref ref-type="fig" rid="Ch1.F6"/> and
<xref ref-type="fig" rid="Ch1.F10"/>. Note that H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O and CO are shown using a
logarithmic scale.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f07.pdf"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p>Time series of near-global (60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S to 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N)
temperature at 10 hPa for the raw and satellite-sampled data (gray lines).
Orange lines display the trend computed using the linear fit, green lines
show the climatological seasonal cycle imposed upon a long-term trend and
light blue lines show the model computed using Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>). The
trend (K decade<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) computed using each method is specified in each
subplot; in brackets we show the percentage difference in trend magnitude
with respect to the trend found using the raw model data.</p></caption>
        <?xmltex \igopts{width=298.753937pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f08.pdf"/>

      </fig>

      <p>To highlight the impact of these sampling differences,
Fig. <xref ref-type="fig" rid="Ch1.F8"/> shows trend estimates for near-global
temperature at 10 hPa using the raw and satellite-sampled data. Three
methods have been used to compute the trends. The first is a simple linear
fit (an ordinary least square regression) through the points. In the second,
we deseasonalize the data (we remove the observed climatological monthly mean
at every grid point) before computing a linear fit. Lastly, we consider a
trend model of the form
          <disp-formula id="Ch1.E4" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi>Y</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ω</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>t</mml:mi><mml:mn>12</mml:mn></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mi>S</mml:mi><mml:mo>+</mml:mo><mml:mi>N</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math display="inline"><mml:mi>Y</mml:mi></mml:math></inline-formula> is the monthly raw or sampled average measurements (temperature,
CO or O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> concentration, etc.), <inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula> is a baseline constant, <inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">ω</mml:mi></mml:math></inline-formula> is
the mean trend per year, <inline-formula><mml:math display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> is time in months, <inline-formula><mml:math display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> is a seasonal mean
component represented by
          <disp-formula id="Ch1.E5" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi>S</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi>sin⁡</mml:mi><mml:mo>(</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mrow><mml:mn>12</mml:mn></mml:mfrac></mml:mstyle><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi>sin⁡</mml:mi><mml:mo>(</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mrow><mml:mn mathvariant="normal">6</mml:mn></mml:mfrac></mml:mstyle><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        and <inline-formula><mml:math display="inline"><mml:mi>N</mml:mi></mml:math></inline-formula> is the unexplained portion of the data assumed to follow a first-order autoregressive model [AR(1)]. That is, it satisfies</p>
      <p><?xmltex \hack{\newpage}?>
          <disp-formula id="Ch1.E6" content-type="numbered"><mml:math display="block"><mml:mrow><mml:mi>N</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi><mml:msub><mml:mi>N</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula> is the autocorrelation of the noise, computed and assumed
temporally invariant, following <xref ref-type="bibr" rid="bib1.bibx43" id="text.23"/>, and <inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">ε</mml:mi></mml:math></inline-formula> is independent white noise variables with variance <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="italic">ε</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:math></inline-formula>. As
pointed out by <xref ref-type="bibr" rid="bib1.bibx43" id="text.24"/>, <inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula> has the effect of reducing the amount
of information that would have been available in the same number of
independent data points. Similar models have been used in many previous trend
studies <xref ref-type="bibr" rid="bib1.bibx43 bib1.bibx45 bib1.bibx5 bib1.bibx46" id="paren.25"><named-content content-type="pre">e.g.</named-content></xref>.
As shown in Fig. <xref ref-type="fig" rid="Ch1.F8"/>, HALOE (ACE-FTS) sampling
artificially reduces (increases) the trend estimates by about 10 %
(25 %). Despite agreement on the sign of the trend, these
sampling-induced artifacts will compromise the robustness of the derived
temperature trends. We computed the trend using different methods in order to
emphasize that using models that are more geophysically realistic, such as
those that capture the seasonal component, may not have much impact on the
estimated trends or, as pointed out by <xref ref-type="bibr" rid="bib1.bibx45" id="text.26"/>, on the trend
statistical properties.</p>
      <p>Figure <xref ref-type="fig" rid="Ch1.F9"/> shows how these sampling-induced trend
artifacts vary with altitude. To avoid clutter, this figure only shows the
differences in trend magnitude computed using Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>), but
the ones computed using the other trend detection methods are similar. We
show results for temperature, O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and CO because these parameters exhibit
clear trends at most pressure levels in the CMAM30-SD simulations and also
because overall they can be accurately described by the model given by
Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>). For O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> we only use data starting from 2000 to
capture the expected period of O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> recovery. Overall, MLS sampling allows the estimation of the trend magnitudes to about 1 order of magnitude better than
HALOE and ACE-FTS sampling, with accuracy better than 1 % at most
pressure levels for temperature and CO and better than 10 % for O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9"><caption><p>Left: near-global (60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S to 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) long-term
(1979–2012) trends computed using Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>) for temperature,
O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and CO. Middle: percentage difference in the inferred magnitude of the
trends when computed using various satellite-sampled data with respect to the
one computed using the raw model fields. Right: number of years required to
detect such trends. </p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f09.pdf"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10" specific-use="star"><caption><p>As Fig. <xref ref-type="fig" rid="Ch1.F6"/> but for 30 to 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N.</p></caption>
        <?xmltex \igopts{width=298.753937pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f10.pdf"/>

      </fig>

      <p>Figure <xref ref-type="fig" rid="Ch1.F9"/> also shows the estimated number of years
required to definitively detect these trends. When using
Eq. (<xref ref-type="disp-formula" rid="Ch1.E4"/>), the number of years, <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>n</mml:mi><mml:mo>*</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, needed to detect a
given trend with a 95 % confidence level with a probability of 0.90 can be
approximated by <xref ref-type="bibr" rid="bib1.bibx43" id="paren.27"/>
          <disp-formula id="Ch1.E7" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msup><mml:mi>n</mml:mi><mml:mo>*</mml:mo></mml:msup><mml:mo>=</mml:mo><mml:msup><mml:mfenced close="]" open="["><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn>3.3</mml:mn><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>N</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mo>|</mml:mo><mml:mi mathvariant="italic">ω</mml:mi><mml:mo>|</mml:mo></mml:mrow></mml:mfrac></mml:mstyle><mml:msqrt><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:msqrt></mml:mfenced><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        which indicates that trend detectability depends on three factors: (1) <inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula>
the autocorrelation of the residual between the data points and the trend
model computed following <xref ref-type="bibr" rid="bib1.bibx43" id="text.28"/>; (2) <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>N</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the standard
deviation of the residual, which corresponds to the unexplained variability
of the data; and (3) the absolute magnitude of the trend. It is also noted
that <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>N</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is related to <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="italic">ε</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> by
          <disp-formula id="Ch1.E8" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="italic">ε</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></disp-formula>
        in this trend model (Eq. <xref ref-type="disp-formula" rid="Ch1.E4"/>). Note that <inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula> was computed
for the raw as well as the satellite-sampled data. As shown in
Fig. <xref ref-type="fig" rid="Ch1.F9"/>, trend detection using data with HALOE or
ACE-FTS sampling will require considerably more years than using data with
MLS sampling. This is due to an increase in the magnitude of <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>N</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
resulting from the noisiness of the time series based on the HALOE or ACE-FTS
sampling patterns (e.g., Fig. <xref ref-type="fig" rid="Ch1.F8"/>). For example,
at 1 hPa, the pressure level where the strongest temperature trend is found
in CMAM30-SD, a 15-year record of MLS-sampled observations would be required
to detect such a trend at the 95 % confidence level, while HALOE and
ACE-FTS sampling would require 25 and 30 years, respectively. For O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> at
2 hPa, the pressure level where the strongest O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> trend is found in
CMAM30-SD, the MLS sampling pattern would require about 11 years, while HALOE
and ACE-FTS would require about 20 and 30 years, respectively. In addition,
MLS sampling requires the same number of years as for the raw model fields;
that is, the required number of years is only determined by the natural
variability. We also performed this analysis using only the autocorrelation
computed for the raw model data and found no significant differences.</p>
      <p>We also investigated the effect of instrument noise, using <xref ref-type="bibr" rid="bib1.bibx43" id="text.29"/>
and <xref ref-type="bibr" rid="bib1.bibx46" id="text.30"/>:
          <disp-formula id="Ch1.E9" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>N</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mi mathvariant="italic">ε</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>I</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mrow><mml:msub><mml:mi>n</mml:mi><mml:mtext>I</mml:mtext></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:msqrt><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mtext>I</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the instrument noise and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>n</mml:mi><mml:mtext>I</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the
number of measurements averaged. Typical noise estimates were taken from
<xref ref-type="bibr" rid="bib1.bibx24" id="text.31"/> for MLS; <xref ref-type="bibr" rid="bib1.bibx8" id="text.32"/>, <xref ref-type="bibr" rid="bib1.bibx39" id="text.33"/> and
<xref ref-type="bibr" rid="bib1.bibx11" id="text.34"/> for ACE-FTS; and <xref ref-type="bibr" rid="bib1.bibx20" id="text.35"/> and <xref ref-type="bibr" rid="bib1.bibx7" id="text.36"/>
for HALOE. Since HALOE does not measure CO, we assumed the same error as
given by <xref ref-type="bibr" rid="bib1.bibx8" id="text.37"/> for ACE-FTS. The effect of instrument noise was
found to be negligible due to the high number of measurements even for HALOE
and ACE-FTS (in a given month, around 70 000 for MLS, 600 for HALOE and 270
for ACE-FTS). These estimates of the length of the measurement record
required to detect trends do not take into account the effects of a
disruption of the measurements for a given period or aging of the instrument,
both of which can induce artificial trends in the data that are not
representative of the actual environmental trend studied.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11"><caption><p>As Fig. <xref ref-type="fig" rid="Ch1.F9"/> but for 30 to 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N. </p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f11.pdf"/>

      </fig>

      <p>Both HALOE and ACE-FTS provide better coverage in the extratropics than in
the tropics (see Fig. <xref ref-type="fig" rid="Ch1.F1"/>).
Figure <xref ref-type="fig" rid="Ch1.F10"/> therefore shows long-term pattern
comparisons between satellite-sampled and raw data for trends derived using
only data from 30 to 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N. Figure <xref ref-type="fig" rid="Ch1.F7"/> also shows the
raw model standard deviations used to normalize these diagrams (purple
lines). In general, HALOE- and ACE-FTS-sampled data correlation coefficients
improved considerably over the near-global case, with a correlation coefficient
no smaller than <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 0.6 and with a centered RMSd better than 1 raw model
standard deviation (see Fig. <xref ref-type="fig" rid="Ch1.F10"/>). MLS-sampled data
are still closest to the reference point. Two variables can have similar
trends but still perform poorly in Taylor diagrams due to either a lack of
correlation or different standard deviations. In both cases, this will impact
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">σ</mml:mi><mml:mi>N</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, resulting in an increase in the number of years required to
statistically detect such a trend.</p>
      <p>Figure <xref ref-type="fig" rid="Ch1.F11"/> is equivalent to
Fig. <xref ref-type="fig" rid="Ch1.F9"/> but for the 30 to 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N latitude
range. As for the near-global trends, ACE-FTS sampling still requires
considerably more years to confidently detect a trend than does MLS sampling.
HALOE, however, has a more uniform sampling density than ACE-FTS in this
latitude range (see Fig. <xref ref-type="fig" rid="Ch1.F1"/>), and thus the time required
to detect a trend is more in line with that for MLS. Nevertheless, MLS
sampling allows estimation of trends to about 1 order of magnitude better
than HALOE and ACE-FTS sampling. As before, the effect of instrument noise
was found to be negligible (for this latitude range the approximate number of
measurements in a given month is 19 000, 220 and 70 for MLS, HALOE and
ACE-FTS, respectively).</p>
      <p>As shown, the ability to detect trends depends upon the natural variability
and the correlation of the data. These in turn vary with the specific
parameter as well as the location and height being studied. Studies of
natural variability and autocorrelation of the data will help identify where
to monitor to find more readily detectable trends, but such a study is
outside the scope of this paper.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F12"><caption><p>The atmospheric tape recorder (zonal mean water vapor anomalies in
the tropics, in this case for CMAM30-SD raw model fields) displays a clear
signal of the large-scale upward transport as indicated by the arrow. The
slope of this arrow, which is derived from the propagation speed of the water
vapor anomalies, represents the average tropical upwelling velocity for
8<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–8<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N. This subset of years is shown as an example;
other years are similar. </p></caption>
        <?xmltex \igopts{width=227.622047pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f12.pdf"/>

      </fig>

</sec>
<sec id="Ch1.S5">
  <title>Tropical vertical velocities</title>
      <p>In this section we investigate the impact of orbital sampling upon derived
tropical vertical velocities (a key metric for atmospheric circulation). The
vertical velocities are calculated using the same approach as described by
<xref ref-type="bibr" rid="bib1.bibx14" id="text.38"/> and <xref ref-type="bibr" rid="bib1.bibx21" id="text.39"/>. In short, we use time series of
daily zonal mean water vapor data averaged between 8<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S and
8<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N (see Fig. <xref ref-type="fig" rid="Ch1.F12"/>). We correlate these time series at
different pressure levels and determine the time lag for the best
correlation. The vertical velocity for the midpoint of each layer is simply
computed by dividing the distance between the pressure levels (the altitude
difference) by the lag. These calculations were performed using the raw model
CMAM30-SD simulations as well as the satellite-sampled data. The vertical
velocities derived from this method are a measure of the transport velocity
averaged over 8<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–8<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and have been shown to agree well
with the transformed Eulerian mean residual vertical velocity when in-mixing
from the extratropics and vertical diffusion are small <xref ref-type="bibr" rid="bib1.bibx37" id="paren.40"/>.
Interpolation was used to fill the data gaps due to the sampling patterns. In
the case of HALOE sampling, this implies linearly interpolating to fill gaps
in June and December. For ACE-FTS, gaps are filled in January, March, May,
July, September, November and December, when no measurements are made over
the tropics (8<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S to 8<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N); thus, we are applying the
analysis to highly interpolated data. Considering the degree of interpolation
required, we do not recommend the use of ACE-FTS to derive tropical upwelling
velocities, but we include this case merely as an illustrative example.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F13"><caption><p>Top: <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mtext>TR</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (monthly vertical velocities) derived using
daily time correlations of the water vapor tape recorder at different
pressure levels from the raw CMAM30-SD data as well as the satellite-sampled
data. <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mtext>TR</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> derived using the raw model fields and MLS-sampled
data are almost identical. The pressure levels averaged are 30, 40, 50 and
60 hPa. Bottom: <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mtext>w</mml:mtext><mml:mtext>TR</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> scatterplots (mm s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) for
MLS, HALOE and ACE-FTS sampling, respectively, vs. the velocities derived
using raw model fields. The slopes' 95 % confidence intervals are <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>
0.007, 0.06 and 0.09 for MLS, HALOE and ACE-FTS, respectively. </p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f13.pdf"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F14" specific-use="star"><caption><p><bold>(a)</bold> Time series of <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mtext>TR</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (mean monthly vertical
velocities averaged over 30, 40, 50 and 60 hPa) derived using CMAM30-SD raw
data (black), the quasi-biennial oscillation (QBO) shear index (QSI – purple)
and the multivariate ENSO index (MEI - orange dashed line). <bold>(b)</bold> Time
series of <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mtext>TR</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> for the raw model fields (black) as well as the
model fit described by Eq. (<xref ref-type="disp-formula" rid="Ch1.E10"/>) (gray). <bold>(c–e)</bold> Time
series of <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mtext>TR</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> for satellite-sampled data (color coded). The
thin black line displays the same <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mtext>TR</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> derived using raw model
fields (black line in <bold>b</bold>) for ease of comparison with the
satellite-sampled ones. The model fit for each of the satellite-sampled
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mtext>TR</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> values, described by Eq. (<xref ref-type="disp-formula" rid="Ch1.E10"/>), is shown in gray
for each of these time series.</p></caption>
        <?xmltex \igopts{width=298.753937pt}?><graphic xlink:href="https://acp.copernicus.org/articles/16/11521/2016/acp-16-11521-2016-f14.pdf"/>

      </fig>

      <p>Figure <xref ref-type="fig" rid="Ch1.F13"/> (top) shows the vertical velocities averaged over
60–30 hPa derived using raw model fields as well as the satellite-sampled
data. To quantify the impact of the different orbital sampling patterns,
Fig. <xref ref-type="fig" rid="Ch1.F13"/> (bottom) displays scatterplots between the raw
fields and the satellite-sampled vertical velocities. The best correlation
(<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>R</mml:mi><mml:mo>=</mml:mo><mml:mn>1.00</mml:mn></mml:mrow></mml:math></inline-formula>), the best line fit (1.07 <inline-formula><mml:math display="inline"><mml:mi>x</mml:mi></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.02, obtained using an
ordinary least squares fit regression) and the smallest RMSd (0.005) are
found when using the MLS sampling. ACE-FTS and HALOE sampling lead to
non-negligible artifacts when deriving vertical velocities from the tape
recorder.</p>
      <p>Previous studies have shown variability in middle stratospheric tropical
vertical velocities on the order of up to <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>40 % associated with the
QBO and ENSO <xref ref-type="bibr" rid="bib1.bibx15 bib1.bibx32 bib1.bibx30" id="paren.41"/>. To better
understand the impact of these sampling-induced artifacts, we fit the
following model to the monthly vertical velocities
          <disp-formula id="Ch1.E10" content-type="numbered"><mml:math display="block"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mtext>TR</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi>q</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>QSI</mml:mtext><mml:mo>[</mml:mo><mml:mi>t</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>q</mml:mi></mml:msub><mml:mo>]</mml:mo><mml:mo>+</mml:mo><mml:mi>e</mml:mi><mml:mo>⋅</mml:mo><mml:mtext>MEI</mml:mtext><mml:mo>[</mml:mo><mml:mi>t</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>e</mml:mi></mml:msub><mml:mo>]</mml:mo><mml:mo>+</mml:mo><mml:mi>c</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        <?xmltex \hack{\newpage}?><?xmltex \hack{\noindent}?>where <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mtext>TR</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the vertical velocity derived from the tape
recorder, QSI is a QBO shear index, MEI is the
multivariate ENSO index, <inline-formula><mml:math display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula> is a baseline constant, <inline-formula><mml:math display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula> are
constants modifying the magnitude of the QSI or MEI, and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>q</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>e</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are
the QSI or MEI time offsets, respectively. The QSI is calculated from the
difference in the Singapore zonal winds at 50 and 25 hPa
<xref ref-type="bibr" rid="bib1.bibx31" id="paren.42"/>. The MEI is determined using a combination of the
principal component analysis of sea level pressure, sea surface temperature,
zonal and meridional surface winds, surface air temperature, and cloudiness as
described by <xref ref-type="bibr" rid="bib1.bibx47 bib1.bibx48" id="text.43"/>.
Figure <xref ref-type="fig" rid="Ch1.F14"/>a shows the time series of the QSI and the
MEI, along with the vertical velocities averaged over 60–30 hPa derived
using raw model fields. As can be seen, these vertical velocities are clearly
correlated with the QSI but also show a strong relationship with the MEI in
some years. Figure <xref ref-type="fig" rid="Ch1.F14"/>b–e displays the results of
fitting the model described by Eq. (<xref ref-type="disp-formula" rid="Ch1.E10"/>) to the raw (panel b) and
satellite-sampled (panels c–e) derived vertical velocities. The time offsets
were fitted using the raw model fields and then imposed onto the
satellite-sampled data. We do not fit a modeled seasonal cycle, such as the
one described by Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>), because the methodology used
suppresses the seasonal cycle <xref ref-type="bibr" rid="bib1.bibx15" id="paren.44"/>. As shown, this model is able
to capture most of the variability in the derived vertical velocities. The
fits are primarily driven by the QSI, with MLS sampling overestimating its
influence by 3.8 % (the differences in <inline-formula><mml:math display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula> in the equations shown in
Fig. <xref ref-type="fig" rid="Ch1.F14"/>), while HALOE and ACE-FTS sampling
underestimate it by 30.7 and 31.5 %, respectively. The impact of the
sampling is more pronounced for the MEI (the differences in <inline-formula><mml:math display="inline"><mml:mi>e</mml:mi></mml:math></inline-formula>), with MLS,
HALOE and ACE-FTS underestimating its influence by 11, 64 and 122 %. We
emphasize that these sampling-induced offsets to the strength of the
modulation effects of the QBO and ENSO on the circulation are only applicable
to CMAM30-SD fields. These fields may not accurately represent the
stratospheric tropical vertical velocities and, consequently, the actual
sampling offsets could be different. As such, they should be considered only
as potential biases.</p>
      <p>The changes in tropical upwelling associated with QBO and ENSO assessed here
have been shown to alter O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> transport to the midlatitude lower
stratosphere and to account for approximately half the interannual
variability in midlatitude tropospheric O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx32" id="paren.45"/>. It has been
hypothesized that this observed relationship between stratospheric upwelling
changes and changes in tropospheric O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> may provide an emergent constraint
on the tropospheric O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> response to long-term strengthening of the
circulation associated with greenhouse gas increases. If so, accurate
quantification of the variability in tropical vertical velocities is crucial
to reducing uncertainties in estimating this response.</p>
</sec>
<sec id="Ch1.S6" sec-type="conclusions">
  <title>Summary</title>
      <p>In this paper we evaluate the effect of orbital sampling on satellite
measurements of stratospheric temperature and several trace gases. In
particular, we quantify the impact of sampling in terms of the sampling bias.
To illustrate the impact of orbital sampling on the outcome of representative
atmospheric studies, we also quantify the induced differences in the inferred
magnitude of trends and their detectability, as well as the induced
differences in derived tropical vertical velocities. We calculate these
sampling-induced artifacts by interpolating CMAM30-SD model fields (used as a
proxy for the real atmosphere) to the real sampling patterns of three
satellite instruments – Aura MLS, HALOE and ACE-FTS – to allow us to
compare a dense uniform sampling pattern characteristic of limb emission
sounders to the coarse nonuniform sampling patterns characteristic of solar
occultation instruments.</p>
      <p>The results suggest that overall
<list list-type="bullet"><list-item>
      <p>coarse nonuniform sampling patterns, such as the ones from HALOE and
ACE-FTS, can introduce sampling biases about 1 order of magnitude greater
than those from dense uniform sampling patterns, such as the one from MLS.
For example, we found a temperature maximum sampling bias of about 10 K
compared to 1 K and H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O maximum sampling biases as large as 5 % as
opposed to less than 1 % in the middle stratosphere. These results
corroborate the results of <xref ref-type="bibr" rid="bib1.bibx44" id="text.46"/> and <xref ref-type="bibr" rid="bib1.bibx40" id="text.47"/>.</p></list-item><list-item>
      <p>dense uniform sampling patterns accurately reproduce the magnitude of
the model trends with only small errors. Records based on such sampling
patterns will require the same number of years as when using the raw model
fields, that is to say, trend detection is limited only by the natural
variability. In contrast, coarse nonuniform sampling patterns may introduce
non-negligible errors to the inferred magnitude of trends, with considerably
more years of data thus required to conclusively detect a given trend. This
is because the sparse nonuniform sampling leads to an increase in the
standard deviation of the total noise in the time series. For example, for
near-global temperature trends (60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N) at 10 hPa,
HALOE and ACE-FTS sampling patterns artificially bias the trend estimates by
about <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>10 and 25 %, respectively. Also, at 1 hPa, the pressure level at which the strongest temperature trend was found in CMAM30-SD, an MLS sampling
pattern will require 15 years to detect this particular trend, while the
HALOE and ACE-FTS sampling will require 25 and 30 years, respectively.</p></list-item><list-item>
      <p>coarse nonuniform sampling patterns may lead to an over- or underestimation
of the modulation effects of the controlling mechanisms of the tropical
vertical velocities. For example, with respect to CMAM30-SD estimates, HALOE
and ACE-FTS sampling patterns underestimate the QBO modulation strength by
30.7 and 31.5 %, and the ENSO modulation strength by 64 and 122 %,
respectively. Dense uniform sampling patterns are considerably better suited
to deriving tropical vertical velocities; for example, MLS sampling only
overestimates the QBO influence by 3.8 % and underestimates the ENSO
influence by 11 %.</p></list-item></list></p>
      <p>Stratospheric changes such as a possible increase in the circulation and
trends in temperature and O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> are signatures of greenhouse gas warming and
stratospheric O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> recovery. Thus, our ability to accurately measure these
changes is crucial for detecting anthropogenic influences on climate.</p>
</sec>
<sec id="Ch1.S7">
  <title>Data availability</title>
      <p>All the data used in this study are publicly available. CMAM30-SD fields can
be found in the Canadian Centre for Climate Modelling and Analysis webpage
(<uri>http://www.cccma.ec.gc.ca/data/cmam/output/CMAM/CMAM30-SD/index.shtml</uri>).
MLS data are available from the NASA Goddard Space Flight Center Earth
Sciences (GES) Data and Information Services Center
(<uri>http://disc.sci.gsfc.nasa.gov/Aura/data-holdings/MLS/index.shtml</uri>).
HALOE data are available from the HALOE GATS webpage
(<uri>http://haloe.gats-inc.com/download/index.php</uri>). ACE-FTS data are
available from the ACE Public Datasets webpage
(<uri>http://www.ace.uwaterloo.ca/public.html</uri>).</p><?xmltex \hack{\newpage}?>
</sec>

      
      </body>
    <back><ack><title>Acknowledgements</title><p>Work at the Jet Propulsion Laboratory, California Institute of Technology,
was done under contract with the National Aeronautics and Space
Administration. We thank David Plummer of Environment Canada for his
assistance in obtaining the CMAM30-SD dataset.<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: B. Funke<?xmltex \hack{\newline}?> Reviewed by: two anonymous referees</p></ack><ref-list>
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