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<front>
<journal-meta>
<journal-id journal-id-type="publisher">ACP</journal-id>
<journal-title-group>
<journal-title>Atmospheric Chemistry and Physics</journal-title>
<abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1680-7324</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/acp-15-5123-2015</article-id>
<title-group>
<article-title>Influence of isoprene chemical mechanism on modelled changes in tropospheric ozone due to climate and land use over the 21st century</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Squire</surname>
<given-names>O. J.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Archibald</surname>
<given-names>A. T.</given-names>
<ext-link>https://orcid.org/0000-0001-9302-4180</ext-link>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Griffiths</surname>
<given-names>P. T.</given-names>
<ext-link>https://orcid.org/0000-0002-1089-340X</ext-link>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Jenkin</surname>
<given-names>M. E.</given-names>
<ext-link>https://orcid.org/0000-0002-7669-2985</ext-link>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Smith</surname>
<given-names>D.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Pyle</surname>
<given-names>J. A.</given-names>
<ext-link>https://orcid.org/0000-0003-3629-9916</ext-link>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>Centre for Atmospheric Science, Department of Chemistry, University of Cambridge, Cambridge, CB2 1EW, UK</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>National Centre for Atmospheric Science, Department of Chemistry, University of Cambridge, Cambridge, CB2 1EW, UK</addr-line>
</aff>
<aff id="aff3">
<label>3</label>
<addr-line>Atmospheric Chemistry Services, Okehampton, Devon EX20 1FB, UK</addr-line>
</aff>
<pub-date pub-type="epub">
<day>07</day>
<month>05</month>
<year>2015</year>
</pub-date>
<volume>15</volume>
<issue>9</issue>
<fpage>5123</fpage>
<lpage>5143</lpage>
<permissions>
<copyright-statement>Copyright: &#x000a9; 2015 O. J. Squire et al.</copyright-statement>
<copyright-year>2015</copyright-year>
<license license-type="open-access">
<license-p>This work is licensed under the Creative Commons Attribution 3.0 Unported License. To view a copy of this licence, visit <ext-link ext-link-type="uri"  xlink:href="https://creativecommons.org/licenses/by/3.0/">https://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions>
<self-uri xlink:href="https://acp.copernicus.org/articles/15/5123/2015/acp-15-5123-2015.html">This article is available from https://acp.copernicus.org/articles/15/5123/2015/acp-15-5123-2015.html</self-uri>
<self-uri xlink:href="https://acp.copernicus.org/articles/15/5123/2015/acp-15-5123-2015.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/15/5123/2015/acp-15-5123-2015.pdf</self-uri>
<abstract>
<p>Isoprene is a~precursor to tropospheric ozone, a key pollutant and greenhouse
gas. Anthropogenic activity over the coming century is likely to cause large
changes in atmospheric CO&lt;sub&gt;2&lt;/sub&gt; levels, climate and land use, all of which will
alter the global vegetation distribution leading to changes in isoprene
emissions. Previous studies have used global chemistry–climate models to
assess how possible changes in climate and land use could affect isoprene
emissions and hence tropospheric ozone. The chemistry of isoprene oxidation,
which can alter the concentration of ozone, is highly complex, therefore it
must be parameterised in these models. In this work, we compare the effect of
four different reduced isoprene chemical mechanisms, all currently used in
Earth system models, on tropospheric ozone. Using a box model we compare
ozone in these reduced schemes to that in a more explicit scheme (the Master Chemical Mechanism)
over a range of NO&lt;sub&gt;&lt;i&gt;x&lt;/i&gt;&lt;/sub&gt; and isoprene emissions, through the use of O&lt;sub&gt;3&lt;/sub&gt;
isopleths. We find that there is some variability, especially at high
isoprene emissions, caused by differences in isoprene-derived NO&lt;sub&gt;&lt;i&gt;x&lt;/i&gt;&lt;/sub&gt;
reservoir species. A global model is then used to examine how the different
reduced schemes respond to potential future changes in climate, isoprene
emissions, anthropogenic emissions and land use change. We find that,
particularly in isoprene-rich regions, the response of the schemes varies
considerably. The wide-ranging response is due to differences in the model
descriptions of the peroxy radical chemistry, particularly their relative
rates of reaction towards NO, leading to ozone formation, or HO&lt;sub&gt;2&lt;/sub&gt;, leading
to termination. Also important is the yield of isoprene nitrates and
peroxyacyl nitrate precursors from isoprene oxidation. Those schemes that
produce less of these NO&lt;sub&gt;&lt;i&gt;x&lt;/i&gt;&lt;/sub&gt; reservoir species, tend to produce more ozone
locally and less away from the source region. We also note changes in other
key oxidants such as NO&lt;sub&gt;3&lt;/sub&gt; and OH (due to the inclusion of additional
isoprene-derived HO&lt;sub&gt;&lt;i&gt;x&lt;/i&gt;&lt;/sub&gt; recycling pathways). These have implications for secondary organic aerosol
formation, as does the inclusion of an epoxide formation pathway in one of
the mechanisms. By combining the emissions and O&lt;sub&gt;3&lt;/sub&gt; data from all of the
global model integrations, we are able to construct isopleth plots comparable
to those from the box model analysis. We find that the global and box model
isopleths show good qualitative agreement, suggesting that comparing chemical
mechanisms with a box model in this framework is a useful tool for assessing
mechanistic performance in complex global models. We conclude that as the
choice of reduced isoprene mechanism may alter both the magnitude and sign of
the ozone response, how isoprene chemistry is parameterised in perturbation
experiments such as these is a crucially important consideration. More
measurements and laboratory studies are needed to validate these reduced
mechanisms especially under high-volatile-organic-compound, low-NO&lt;sub&gt;&lt;i&gt;x&lt;/i&gt;&lt;/sub&gt; conditions.</p>
</abstract>
<counts><page-count count="21"/></counts>
<funding-group>
<award-group id="gs1">
<funding-source>European Research Council</funding-source>
<award-id>267760</award-id>
</award-group>
</funding-group>
</article-meta>
</front>
<body/>
<back>
<ref-list>
<title>References</title>
<ref id="ref1">
<label>1</label><mixed-citation publication-type="other" xlink:type="simple">Archibald, A. T., Cooke, M. C., Utembe, S. R., Shallcross, D. E., Derwent, R. G., and Jenkin, M. E.: Impacts of mechanistic changes on HO&lt;i&gt;&lt;sub&gt;x&lt;/sub&gt;&lt;/i&gt; formation and recycling in the oxidation of isoprene, Atmos. Chem. Phys., 10, 8097–8118, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-10-8097-2010&quot;&gt;https://doi.org/10.5194/acp-10-8097-2010&lt;/a&gt;, 2010a.</mixed-citation>
</ref>
<ref id="ref2">
<label>2</label><mixed-citation publication-type="other" xlink:type="simple">Archibald, A. T., Jenkin, M. E., and Shallcross, D. E.: An isoprene mechanism intercomparison, Atmos. Environ., 44, 5356–5364, &lt;a href=&quot;http://dx.doi.org/10.1016/j.atmosenv.2009.09.016&quot;&gt;https://doi.org/10.1016/j.atmosenv.2009.09.016&lt;/a&gt;, 2010b.</mixed-citation>
</ref>
<ref id="ref3">
<label>3</label><mixed-citation publication-type="other" xlink:type="simple">Archibald, A. T., Levine, J. G., Abraham, N. L., Cooke, M. C., Edwards, P. M., Heard, D. E., Jenkin, M. E., Karunaharan, A., Pike, R. C., Monks, P. S., Shallcross, D. E., Telford, P. J., Whalley, L. K., and Pyle, J. A.: Impacts of HO&lt;i&gt;&lt;sub&gt;x&lt;/sub&gt;&lt;/i&gt; regeneration and recycling in the oxidation of isoprene: consequences for the composition of past, present and future atmospheres, Geophys. Res. Lett., 38, L05804, &lt;a href=&quot;http://dx.doi.org/10.1029/2010GL046520&quot;&gt;https://doi.org/10.1029/2010GL046520&lt;/a&gt;, 2011.</mixed-citation>
</ref>
<ref id="ref4">
<label>4</label><mixed-citation publication-type="other" xlink:type="simple">Aumont, B., Szopa, S., and Madronich, S.: Modelling the evolution of organic carbon during its gas-phase tropospheric oxidation: development of an explicit model based on a self generating approach, Atmos. Chem. Phys., 5, 2497–2517, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-5-2497-2005&quot;&gt;https://doi.org/10.5194/acp-5-2497-2005&lt;/a&gt;, 2005.</mixed-citation>
</ref>
<ref id="ref5">
<label>5</label><mixed-citation publication-type="other" xlink:type="simple">Browne, E. C. and Cohen, R. C.: Effects of biogenic nitrate chemistry on the NO&lt;i&gt;&lt;sub&gt;x&lt;/sub&gt;&lt;/i&gt; lifetime in remote continental regions, Atmos. Chem. Phys., 12, 11917–11932, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-12-11917-2012&quot;&gt;https://doi.org/10.5194/acp-12-11917-2012&lt;/a&gt;, 2012.</mixed-citation>
</ref>
<ref id="ref6">
<label>6</label><mixed-citation publication-type="other" xlink:type="simple">Cameron-Smith, P., Prather, M. J., Lamarque, J., Hess, P. G., Connell, P. S., Bergmann, D. J., and Vitt, F. M.: The super-fast chemistry mechanism for IPCC AR5 simulations with CCSM, in: American Geophysical Union, Fall Meeting, 18 December 2009, San Francisco, A54A-08, 2009.</mixed-citation>
</ref>
<ref id="ref7">
<label>7</label><mixed-citation publication-type="other" xlink:type="simple">Chameides, W., Lindsay, R., Richardson, J., and Kiang, C.: The role of biogenic hydrocarbons in urban photochemical smog – Atlanta as a case-study, Science, 241, 1473–1475, 1988.</mixed-citation>
</ref>
<ref id="ref8">
<label>8</label><mixed-citation publication-type="other" xlink:type="simple">Dodge, M.: Combined use of modeling techniques and smog chamber data to derive ozone-precursor relationships, in: Proceedings of the International Conference on Photochemical Oxidant Pollution and its Control, US Environmental Protection Agency, Research Triangle Park, NC, USA, 881–889, 1977.</mixed-citation>
</ref>
<ref id="ref9">
<label>9</label><mixed-citation publication-type="other" xlink:type="simple">Farmer, D. K. and Cohen, R. C.: Observations of HNO&lt;sub&gt;3&lt;/sub&gt;, ΣAN, ΣPN and NO&lt;sub&gt;2&lt;/sub&gt; fluxes: evidence for rapid HO&lt;i&gt;&lt;sub&gt;x&lt;/sub&gt;&lt;/i&gt; chemistry within a pine forest canopy, Atmos. Chem. Phys., 8, 3899–3917, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-8-3899-2008&quot;&gt;https://doi.org/10.5194/acp-8-3899-2008&lt;/a&gt;, 2008.</mixed-citation>
</ref>
<ref id="ref10">
<label>10</label><mixed-citation publication-type="other" xlink:type="simple">Fiore, A. M., Naik, V., Spracklen, D. V., Steiner, A., Unger, N., Prather, M., Bergmann, D., Cameron-Smith, P. J., Cionni, I., Collins, W. J., Dalsoren, S., Eyring, V., Folberth, G. A., Ginoux, P., Horowitz, L. W., Josse, B., Lamarque, J.-F., MacKenzie, I. A., Nagashima, T., O&apos;Connor, F. M., Righi, M., Rumbold, S. T., Shindell, D. T., Skeie, R. B., Sudo, K., Szopa, S., Takemura, T., and Zeng, G.: Global air quality and climate, Chem. Soc. Rev., 41, 6663–6683, 2012.</mixed-citation>
</ref>
<ref id="ref11">
<label>11</label><mixed-citation publication-type="other" xlink:type="simple">Froyd, K. D., Murphy, S. M., Murphy, D. M., de Gouw, J. A., Eddingsaas, N. C., and Wennberg, P. O.: Contribution of isoprene-derived organosulfates to free tropospheric aerosol mass, Proc. Natl. Acad. Sci. USA, 107, 21360–21365, 2010.</mixed-citation>
</ref>
<ref id="ref12">
<label>12</label><mixed-citation publication-type="other" xlink:type="simple">Fuchs, H., Bohn, B., Hofzumahaus, A., Holland, F., Lu, K. D., Nehr, S., Rohrer, F., and Wahner, A.: Detection of HO&lt;sub&gt;2&lt;/sub&gt; by laser-induced fluorescence: calibration and interferences from RO&lt;sub&gt;2&lt;/sub&gt; radicals, Atmos. Meas. Tech., 4, 1209–1225, &lt;a href=&quot;http://dx.doi.org/10.5194/amt-4-1209-2011&quot;&gt;https://doi.org/10.5194/amt-4-1209-2011&lt;/a&gt;, 2011.</mixed-citation>
</ref>
<ref id="ref13">
<label>13</label><mixed-citation publication-type="other" xlink:type="simple">Fuchs, H., Hofzumahaus, A., Rohrer, F., Bohn, B., Brauers, T., Dorn, H.-P., Haeseler, R., Holland, F., Kaminski, M., Li, X., Lu, K., Nehr, S., Tillmann, R., Wegener, R., and Wahner, A.: Experimental evidence for efficient hydroxyl radical regeneration in isoprene oxidation, Nat. Geosci., 6, 1023–1026, 2013.</mixed-citation>
</ref>
<ref id="ref14">
<label>14</label><mixed-citation publication-type="other" xlink:type="simple">Ganzeveld, L., Bouwman, L., Stehfest, E., van Vuuren, D. P., Eickhout, B., and Lelieveld, J.: Impact of future land use and land cover changes on atmospheric chemistry–climate interactions, J. Geophys. Res., 115, D23301, &lt;a href=&quot;http://dx.doi.org/10.1029/2010JD014041&quot;&gt;https://doi.org/10.1029/2010JD014041&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref15">
<label>15</label><mixed-citation publication-type="other" xlink:type="simple">Guenther, A., Karl, T., Harley, P., Wiedinmyer, C., Palmer, P. I., and Geron, C.: Estimates of global terrestrial isoprene emissions using MEGAN (Model of Emissions of Gases and Aerosols from Nature), Atmos. Chem. Phys., 6, 3181–3210, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-6-3181-2006&quot;&gt;https://doi.org/10.5194/acp-6-3181-2006&lt;/a&gt;, 2006.</mixed-citation>
</ref>
<ref id="ref16">
<label>16</label><mixed-citation publication-type="other" xlink:type="simple">Haagen-Smit, A. J.: Chemistry and physiology of Los Angeles smog, Ind. Eng. Chem. Res., 44, 1342–1346, 1952.</mixed-citation>
</ref>
<ref id="ref17">
<label>17</label><mixed-citation publication-type="other" xlink:type="simple">Horowitz, L. W., Fiore, A. M., Milly, G. P., Cohen, R. C., Perring, A., Wooldridge, P. J., Hess, P. G., Emmons, L. K., and Lamarque, J.-F.: Observational constraints on the chemistry of isoprene nitrates over the eastern United States, J. Geophys. Res., 112, D12S08, &lt;a href=&quot;http://dx.doi.org/10.1029/2006JD007747&quot;&gt;https://doi.org/10.1029/2006JD007747&lt;/a&gt;, 2007.</mixed-citation>
</ref>
<ref id="ref18">
<label>18</label><mixed-citation publication-type="other" xlink:type="simple">Huntingford, C., Cox, P. M., Mercado, L. M., Sitch, S., Bellouin, N., Boucher, O., and Gedney, N.: Highly contrasting effects of different climate forcing agents on terrestrial ecosystem services, Philos. T. Roy. Soc. A, 369, 2026–2037, 2011.</mixed-citation>
</ref>
<ref id="ref19">
<label>19</label><mixed-citation publication-type="other" xlink:type="simple">Jeffries, H. E., Gery, M. W., and Carter, W. P. L.: Protocols for Evaluating Oxidant Mechanisms Used in Urban and Regional Models, Tech. rep., US Environmental Protection Agency, Atmospheric Research and Exposure Assessment Laboratory, Research Triangle Park, NC 27711, 1992.</mixed-citation>
</ref>
<ref id="ref20">
<label>20</label><mixed-citation publication-type="other" xlink:type="simple">Jenkin, M.: Review of the atmospheric chemistry of isoprene and evaluation of mechanisms for global modelling, Tech. rep., UK Met Office, Atmospheric Chemistry Services, Oakhampton, Devon, UK, 2012.</mixed-citation>
</ref>
<ref id="ref21">
<label>21</label><mixed-citation publication-type="other" xlink:type="simple">Jenkin, M. E., Saunders, S. M., and Pilling, M. J.: The tropospheric degradation of volatile organic compounds: a protocol for mechanism development, Atmos. Environ., 31, 81–104, 1997.</mixed-citation>
</ref>
<ref id="ref22">
<label>22</label><mixed-citation publication-type="other" xlink:type="simple">Kleinman, L., Daum, P., Lee, J., Lee, Y., Nunnermacker, L., Springston, S., Newman, L., Weinstein-Lloyd, J., and Sillman, S.: Dependence of ozone production on NO and hydrocarbons in the troposphere, Geophys. Res. Lett., 24, 2299–2302, 1997.</mixed-citation>
</ref>
<ref id="ref23">
<label>23</label><mixed-citation publication-type="other" xlink:type="simple">Kubistin, D., Harder, H., Martinez, M., Rudolf, M., Sander, R., Bozem, H., Eerdekens, G., Fischer, H., Gurk, C., Klüpfel, T., Königstedt, R., Parchatka, U., Schiller, C. L., Stickler, A., Taraborrelli, D., Williams, J., and Lelieveld, J.: Hydroxyl radicals in the tropical troposphere over the Suriname rainforest: comparison of measurements with the box model MECCA, Atmos. Chem. Phys., 10, 9705–9728, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-10-9705-2010&quot;&gt;https://doi.org/10.5194/acp-10-9705-2010&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref24">
<label>24</label><mixed-citation publication-type="other" xlink:type="simple">Kwok, E. S. C. and Atkinson, R.: Estimation of hydroxyl radical reaction-rate constants for gas-phase organic-compounds using a structure-reactivity relationship – an update, Atmos. Environ., 29, 1685–1695, 1995.</mixed-citation>
</ref>
<ref id="ref25">
<label>25</label><mixed-citation publication-type="other" xlink:type="simple">Lathiere, J., Hewitt, C. N., and Beerling, D. J.: Sensitivity of isoprene emissions from the terrestrial biosphere to 20th century changes in atmospheric CO&lt;sub&gt;2&lt;/sub&gt; concentration, climate, and land use, Glob. Change Biol., 24, GB1004, &lt;a href=&quot;http://dx.doi.org/10.1029/2009GB003548&quot;&gt;https://doi.org/10.1029/2009GB003548&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref26">
<label>26</label><mixed-citation publication-type="other" xlink:type="simple">Lee, L., Teng, A. P., Wennberg, P. O., Crounse, J. D., and Cohen, R. C.: On rates and mechanisms of OH and O&lt;sub&gt;3&lt;/sub&gt; reactions with isoprene-derived hydroxy nitrates, J. Phys. Chem. A, 118, 1622–1637, 2014.</mixed-citation>
</ref>
<ref id="ref27">
<label>27</label><mixed-citation publication-type="other" xlink:type="simple">Lockwood, A. L., Shepson, P. B., Fiddler, M. N., and Alaghmand, M.: Isoprene nitrates: preparation, separation, identification, yields, and atmospheric chemistry, Atmos. Chem. Phys., 10, 6169–6178, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-10-6169-2010&quot;&gt;https://doi.org/10.5194/acp-10-6169-2010&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref28">
<label>28</label><mixed-citation publication-type="other" xlink:type="simple">Mao, J., Ren, X., Zhang, L., Van Duin, D. M., Cohen, R. C., Park, J.-H., Goldstein, A. H., Paulot, F., Beaver, M. R., Crounse, J. D., Wennberg, P. O., DiGangi, J. P., Henry, S. B., Keutsch, F. N., Park, C., Schade, G. W., Wolfe, G. M., Thornton, J. A., and Brune, W. H.: Insights into hydroxyl measurements and atmospheric oxidation in a California forest, Atmos. Chem. Phys., 12, 8009–8020, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-12-8009-2012&quot;&gt;https://doi.org/10.5194/acp-12-8009-2012&lt;/a&gt;, 2012.</mixed-citation>
</ref>
<ref id="ref29">
<label>29</label><mixed-citation publication-type="other" xlink:type="simple">McGillen, M. R., Archibald, A. T., Carey, T., Leather, K. E., Shallcross, D. E., Wenger, J. C., and Percival, C. J.: Structure-activity relationship (SAR) for the prediction of gas-phase ozonolysis rate coefficients: an extension towards heteroatomic unsaturated species, Phys. Chem. Chem. Phys., 13, 2842–2849, 2011.</mixed-citation>
</ref>
<ref id="ref30">
<label>30</label><mixed-citation publication-type="other" xlink:type="simple">Müller, J.-F., Peeters, J., and Stavrakou, T.: Fast photolysis of carbonyl nitrates from isoprene, Atmos. Chem. Phys., 14, 2497–2508, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-14-2497-2014&quot;&gt;https://doi.org/10.5194/acp-14-2497-2014&lt;/a&gt;, 2014.</mixed-citation>
</ref>
<ref id="ref31">
<label>31</label><mixed-citation publication-type="other" xlink:type="simple">O&apos;Connor, F. M., Johnson, C. E., Morgenstern, O., Abraham, N. L., Braesicke, P., Dalvi, M., Folberth, G. A., Sanderson, M. G., Telford, P. J., Voulgarakis, A., Young, P. J., Zeng, G., Collins, W. J., and Pyle, J. A.: Evaluation of the new UKCA climate-composition model – Part 2: The Troposphere, Geosci. Model Dev., 7, 41–91, &lt;a href=&quot;http://dx.doi.org/10.5194/gmd-7-41-2014&quot;&gt;https://doi.org/10.5194/gmd-7-41-2014&lt;/a&gt;, 2014.</mixed-citation>
</ref>
<ref id="ref32">
<label>32</label><mixed-citation publication-type="other" xlink:type="simple">Pacifico, F., Folberth, G. A., Jones, C. D., Harrison, S. P., and Collins, W. J.: Sensitivity of biogenic isoprene emissions to past, present, and future environmental conditions and implications for atmospheric chemistry, J. Geophys. Res., 117, D22302, &lt;a href=&quot;http://dx.doi.org/10.1029/2012JD018276&quot;&gt;https://doi.org/10.1029/2012JD018276&lt;/a&gt;, 2012.</mixed-citation>
</ref>
<ref id="ref33">
<label>33</label><mixed-citation publication-type="other" xlink:type="simple">Paulot, F., Crounse, J. D., Kjaergaard, H. G., Kuerten, A., St Clair, J. M., Seinfeld, J. H., and Wennberg, P. O.: Unexpected epoxide formation in the gas-phase photooxidation of isoprene, Science, 325, 730–733, 2009.</mixed-citation>
</ref>
<ref id="ref34">
<label>34</label><mixed-citation publication-type="other" xlink:type="simple">Paulot, F., Henze, D. K., and Wennberg, P. O.: Impact of the isoprene photochemical cascade on tropical ozone, Atmos. Chem. Phys., 12, 1307–1325, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-12-1307-2012&quot;&gt;https://doi.org/10.5194/acp-12-1307-2012&lt;/a&gt;, 2012.</mixed-citation>
</ref>
<ref id="ref35">
<label>35</label><mixed-citation publication-type="other" xlink:type="simple">Peeters, J., Nguyen, T. L., and Vereecken, L.: HO&lt;i&gt;&lt;sub&gt;x&lt;/sub&gt;&lt;/i&gt; radical regeneration in the oxidation of isoprene, Phys. Chem. Chem. Phys., 11, 5935–5939, 2009.</mixed-citation>
</ref>
<ref id="ref36">
<label>36</label><mixed-citation publication-type="other" xlink:type="simple">Perring, A. E., Bertram, T. H., Wooldridge, P. J., Fried, A., Heikes, B. G., Dibb, J., Crounse, J. D., Wennberg, P. O., Blake, N. J., Blake, D. R., Brune, W. H., Singh, H. B., and Cohen, R. C.: Airborne observations of total RONO&lt;sub&gt;2&lt;/sub&gt;: new constraints on the yield and lifetime of isoprene nitrates, Atmos. Chem. Phys., 9, 1451–1463, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-9-1451-2009&quot;&gt;https://doi.org/10.5194/acp-9-1451-2009&lt;/a&gt;, 2009.</mixed-citation>
</ref>
<ref id="ref37">
<label>37</label><mixed-citation publication-type="other" xlink:type="simple">Pöschl, U., von Kuhlmann, R., Poisson, N., and Crutzen, P.: Development and intercomparison of condensed isoprene oxidation mechanisms for global atmospheric modeling, J. Atmos. Chem., 37, 29–52, 2000.</mixed-citation>
</ref>
<ref id="ref38">
<label>38</label><mixed-citation publication-type="other" xlink:type="simple">Ren, X., Olson, J. R., Crawford, J. H., Brune, W. H., Mao, J., Long, R. B., Chen, Z., Chen, G., Avery, M. A., Sachse, G. W., Barrick, J. D., Diskin, G. S., Huey, L. G., Fried, A., Cohen, R. C., Heikes, B., Wennberg, P. O., Singh, H. B., Blake, D. R., and Shetter, R. E.: HO&lt;i&gt;&lt;sub&gt;x&lt;/sub&gt;&lt;/i&gt; chemistry during INTEX-A 2004: Observation, model calculation, and comparison with previous studies, J. Geophys. Res., 113, D05310, &lt;a href=&quot;http://dx.doi.org/10.1029/2007JD009166&quot;&gt;https://doi.org/10.1029/2007JD009166&lt;/a&gt;, 2008.</mixed-citation>
</ref>
<ref id="ref39">
<label>39</label><mixed-citation publication-type="other" xlink:type="simple">Sanderson, M., Jones, C., Collins, W., Johnson, C., and Derwent, R.: Effect of climate change on isoprene emissions and surface ozone levels, Geophys. Res. Lett., 30, 1936, &lt;a href=&quot;http://dx.doi.org/10.1029/2003GL017642&quot;&gt;https://doi.org/10.1029/2003GL017642&lt;/a&gt;, 2003.</mixed-citation>
</ref>
<ref id="ref40">
<label>40</label><mixed-citation publication-type="other" xlink:type="simple">Sandu, A. and Sander, R.: Technical note: Simulating chemical systems in Fortran90 and Matlab with the Kinetic PreProcessor KPP-2.1, Atmos. Chem. Phys., 6, 187–195, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-6-187-2006&quot;&gt;https://doi.org/10.5194/acp-6-187-2006&lt;/a&gt;, 2006.</mixed-citation>
</ref>
<ref id="ref41">
<label>41</label><mixed-citation publication-type="other" xlink:type="simple">Savage, N. H., Agnew, P., Davis, L. S., Ordóñez, C., Thorpe, R., Johnson, C. E., O&apos;Connor, F. M., and Dalvi, M.: Air quality modelling using the Met Office Unified Model (AQUM OS24-26): model description and initial evaluation, Geosci. Model Dev., 6, 353–372, &lt;a href=&quot;http://dx.doi.org/10.5194/gmd-6-353-2013&quot;&gt;https://doi.org/10.5194/gmd-6-353-2013&lt;/a&gt;, 2013.</mixed-citation>
</ref>
<ref id="ref42">
<label>42</label><mixed-citation publication-type="other" xlink:type="simple">Shepson, P. B., Mackay, E., and Muthuramu, K.: Henry&apos;s law constants and removal processes for several atmospheric β-hydroxy alkyl nitrates, Environ. Sci. Technol., 30, 3618–3623, 1996.</mixed-citation>
</ref>
<ref id="ref43">
<label>43</label><mixed-citation publication-type="other" xlink:type="simple">Sillman, S. and He, D. Y.: Some theoretical results concerning O&lt;sub&gt;3&lt;/sub&gt;-NO&lt;i&gt;&lt;sub&gt;x&lt;/sub&gt;&lt;/i&gt;-VOC chemistry and NO&lt;i&gt;&lt;sub&gt;x&lt;/sub&gt;&lt;/i&gt;-VOC indicators, J. Geophys. Res., 107, 4659, &lt;a href=&quot;http://dx.doi.org/10.1029/2001JD001123&quot;&gt;https://doi.org/10.1029/2001JD001123&lt;/a&gt;, 2002.</mixed-citation>
</ref>
<ref id="ref44">
<label>44</label><mixed-citation publication-type="other" xlink:type="simple">Squire, O. J., Archibald, A. T., Abraham, N. L., Beerling, D. J., Hewitt, C. N., Lathière, J., Pike, R. C., Telford, P. J., and Pyle, J. A.: Influence of future climate and cropland expansion on isoprene emissions and tropospheric ozone, Atmos. Chem. Phys., 14, 1011–1024, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-14-1011-2014&quot;&gt;https://doi.org/10.5194/acp-14-1011-2014&lt;/a&gt;, 2014.</mixed-citation>
</ref>
<ref id="ref45">
<label>45</label><mixed-citation publication-type="other" xlink:type="simple">Stevenson, D. S., Dentener, F. J., Schultz, M. G., Ellingsen, K., van Noije, T. P. C., Wild, O., Zeng, G., Amann, M., Atherton, C. S., Bell, N., Bergmann, D. J., Bey, I., Butler, T., Cofala, J., Collins, W. J., Derwent, R. G., Doherty, R. M., Drevet, J., Eskes, H. J., Fiore, A. M., Gauss, M., Hauglustaine, D. A., Horowitz, L. W., Isaksen, I. S. A., Krol, M. C., Lamarque, J.-F., Lawrence, M. G., Montanaro, V., M\&quot; uller, J.-F., Pitari, G., Prather, M. J., Pyle, J. A., Rast, S., Rodriguez, J. M., Sanderson, M. G., Savage, N. H., Shindell, D. T., Strahan, S. E., Sudo, K., and Szopa, S.: Multimodel ensemble simulations of present-day and near-future tropospheric ozone, J. Geophys. Res., 111, D08301, &lt;a href=&quot;http://dx.doi.org/10.1029/2005JD006338&quot;&gt;https://doi.org/10.1029/2005JD006338&lt;/a&gt;, 2006.</mixed-citation>
</ref>
<ref id="ref46">
<label>46</label><mixed-citation publication-type="other" xlink:type="simple">Stone, D., Evans, M. J., Edwards, P. M., Commane, R., Ingham, T., Rickard, A. R., Brookes, D. M., Hopkins, J., Leigh, R. J., Lewis, A. C., Monks, P. S., Oram, D., Reeves, C. E., Stewart, D., and Heard, D. E.: Isoprene oxidation mechanisms: measurements and modelling of OH and HO&lt;sub&gt;2&lt;/sub&gt; over a South-East Asian tropical rainforest during the OP3 field campaign, Atmos. Chem. Phys., 11, 6749–6771, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-11-6749-2011&quot;&gt;https://doi.org/10.5194/acp-11-6749-2011&lt;/a&gt;, 2011.</mixed-citation>
</ref>
<ref id="ref47">
<label>47</label><mixed-citation publication-type="other" xlink:type="simple">Surratt, J. D., Chan, A. W. H., Eddingsaas, N. C., Chan, M. N., Loza, C. L., Kwan, A. J., Hersey, S. P., Flagan, R. C., Wennberg, P. O., and Seinfeld, J. H.: Reactive intermediates revealed in secondary organic aerosol formation from isoprene, Proc. Natl. Acad. Sci. USA, 107, 6640–6645, 2010.</mixed-citation>
</ref>
<ref id="ref48">
<label>48</label><mixed-citation publication-type="other" xlink:type="simple">von Kuhlmann, R., Lawrence, M. G., Pöschl, U., and Crutzen, P. J.: Sensitivities in global scale modeling of isoprene, Atmos. Chem. Phys., 4, 1–17, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-4-1-2004&quot;&gt;https://doi.org/10.5194/acp-4-1-2004&lt;/a&gt;, 2004.</mixed-citation>
</ref>
<ref id="ref49">
<label>49</label><mixed-citation publication-type="other" xlink:type="simple">Wang, K. and Shallcross, D.: Modelling terrestrial biogenic isoprene fluxes and their potential impact on global chemical species using a coupled LSM-CTM model, Atmos. Environ., 34, 2909–2925, 2000.</mixed-citation>
</ref>
<ref id="ref50">
<label>50</label><mixed-citation publication-type="other" xlink:type="simple">Warwick, N. J., Archibald, A. T., Ashworth, K., Dorsey, J., Edwards, P. M., Heard, D. E., Langford, B., Lee, J., Misztal, P. K., Whalley, L. K., and Pyle, J. A.: A global model study of the impact of land-use change in Borneo on atmospheric composition, Atmos. Chem. Phys., 13, 9183–9194, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-13-9183-2013&quot;&gt;https://doi.org/10.5194/acp-13-9183-2013&lt;/a&gt;, 2013.</mixed-citation>
</ref>
<ref id="ref51">
<label>51</label><mixed-citation publication-type="other" xlink:type="simple">Whalley, L. K., Edwards, P. M., Furneaux, K. L., Goddard, A., Ingham, T., Evans, M. J., Stone, D., Hopkins, J. R., Jones, C. E., Karunaharan, A., Lee, J. D., Lewis, A. C., Monks, P. S., Moller, S. J., and Heard, D. E.: Quantifying the magnitude of a missing hydroxyl radical source in a tropical rainforest, Atmos. Chem. Phys., 11, 7223–7233, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-11-7223-2011&quot;&gt;https://doi.org/10.5194/acp-11-7223-2011&lt;/a&gt;, 2011.</mixed-citation>
</ref>
<ref id="ref52">
<label>52</label><mixed-citation publication-type="other" xlink:type="simple">Wiedinmyer, C., Tie, X., Guenther, A., Neilson, R., and Granier, C.: Future changes in biogenic isoprene emissions: how might they affect regional and global atmospheric chemistry?, Earth Interact., 10, 1–19, &lt;a href=&quot;http://dx.doi.org/10.1175/EI174.1&quot;&gt;https://doi.org/10.1175/EI174.1&lt;/a&gt;, 2006.</mixed-citation>
</ref>
<ref id="ref53">
<label>53</label><mixed-citation publication-type="other" xlink:type="simple">Wu, S., Mickley, L. J., Jacob, D. J., Logan, J. A., Yantosca, R. M., and Rind, D.: Why are there large differences between models in global budgets of tropospheric ozone?, J. Geophys. Res., 112, D05302, &lt;a href=&quot;http://dx.doi.org/10.1029/2006JD007801&quot;&gt;https://doi.org/10.1029/2006JD007801&lt;/a&gt;, 2007.</mixed-citation>
</ref>
<ref id="ref54">
<label>54</label><mixed-citation publication-type="other" xlink:type="simple">Wu, S., Mickley, L. J., Kaplan, J. O., and Jacob, D. J.: Impacts of changes in land use and land cover on atmospheric chemistry and air quality over the 21st century, Atmos. Chem. Phys., 12, 1597–1609, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-12-1597-2012&quot;&gt;https://doi.org/10.5194/acp-12-1597-2012&lt;/a&gt;, 2012.</mixed-citation>
</ref>
<ref id="ref55">
<label>55</label><mixed-citation publication-type="other" xlink:type="simple">Xie, Y., Paulot, F., Carter, W. P. L., Nolte, C. G., Luecken, D. J., Hutzell, W. T., Wennberg, P. O., Cohen, R. C., and Pinder, R. W.: Understanding the impact of recent advances in isoprene photooxidation on simulations of regional air quality, Atmos. Chem. Phys., 13, 8439–8455, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-13-8439-2013&quot;&gt;https://doi.org/10.5194/acp-13-8439-2013&lt;/a&gt;, 2013.</mixed-citation>
</ref>
</ref-list>
</back>
</article>