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  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">ACP</journal-id>
<journal-title-group>
<journal-title>Atmospheric Chemistry and Physics</journal-title>
<abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1680-7324</issn>
<publisher><publisher-name>Copernicus GmbH</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/acp-15-11789-2015</article-id><title-group><article-title>Implications of carbon monoxide bias for methane lifetime and
atmospheric composition in chemistry climate models</article-title>
      </title-group><?xmltex \runningtitle{Implications of CO bias for methane lifetime}?><?xmltex \runningauthor{S.~A.~Strode et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2">
          <name><surname>Strode</surname><given-names>S. A.</given-names></name>
          <email>sarah.a.strode@nasa.gov</email>
        <ext-link>https://orcid.org/0000-0002-8103-1663</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Duncan</surname><given-names>B. N.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff3 aff6">
          <name><surname>Yegorova</surname><given-names>E. A.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff4">
          <name><surname>Kouatchou</surname><given-names>J.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2 aff5">
          <name><surname>Ziemke</surname><given-names>J. R.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Douglass</surname><given-names>A. R.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-5556-9988</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>GESTAR, Universities Space Research Association, Columbia, MD, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>NASA Goddard Space Flight Center, Greenbelt, MD, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Earth System Science Interdisciplinary Center, College Park, MD, USA</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Science Systems and Applications Inc., Lanham, MD, USA</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>GESTAR, Morgan State University, Baltimore, MD, USA</institution>
        </aff>
        <aff id="aff6"><label>a</label><institution>now at: Nuclear Regulatory Commission, Rockville, MD, USA</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">S. A. Strode (sarah.a.strode@nasa.gov)</corresp></author-notes><pub-date><day>23</day><month>October</month><year>2015</year></pub-date>
      
      <volume>15</volume>
      <issue>20</issue>
      <fpage>11789</fpage><lpage>11805</lpage>
      <history>
        <date date-type="received"><day>1</day><month>June</month><year>2015</year></date>
           <date date-type="rev-request"><day>27</day><month>July</month><year>2015</year></date>
           <date date-type="rev-recd"><day>28</day><month>September</month><year>2015</year></date>
           <date date-type="accepted"><day>12</day><month>October</month><year>2015</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/3.0/">http://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015.html">This article is available from https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015.html</self-uri>
<self-uri xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015.pdf</self-uri>


      <abstract>
    <p>A low bias in carbon monoxide (CO) at northern high and mid-latitudes is a
common feature of chemistry climate models (CCMs) that may indicate or
contribute to a high bias in simulated OH and corresponding low bias in
methane lifetime. We use simulations with CO tagged by source type to
investigate the sensitivity of the CO bias to CO emissions, transport,
global mean OH, and the hemispheric asymmetry of OH. We also investigate how
each of these possible contributors to the CO bias affects the methane
lifetime. We find that the use of specified meteorology alters the
distribution of CO compared to a free-running CCM simulation, improving the
comparison with surface observations in summer. Our results also show that
reducing the hemispheric asymmetry of OH improves the agreement of simulated
CO with observations. We use simulations with parameterized OH to quantify
the impact of known model biases on simulated OH. Removing biases in ozone
and water vapor as well as reducing Northern Hemisphere NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> does not
remove the hemispheric asymmetry in OH, but it reduces global mean OH by
18 %, bringing the simulated methane lifetime into agreement with
observation-based estimates.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p>Carbon monoxide (CO) is an ozone precursor and a major sink of the hydroxyl
radical (OH) in the troposphere (Logan et al., 1981; Spivakovsky et al.,
2000). Consequently, CO indirectly impacts climate by increasing
tropospheric ozone where sufficient NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> is present and increasing the
lifetimes of methane and other short-lived greenhouse gases (GHGs), as well
as eventually oxidizing to CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> (e.g., Prather, 1996; IPCC, 1990). The
effect of CO on OH also leads to impacts on oxidation of SO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> to
sulfate, providing another climate forcing (Shindell et al., 2009). Previous
studies calculated global warming potentials due to these effects using box
models (Daniel and Solomon, 1998), 2-dimensional models (Fuglestvedt et al.,
1996; Johnson and Derwent, 1996), or 3-dimensional models (Derwent et al.,
2001; Fry et al., 2012, 2013; Berntsen et al., 2005; Shindell et al., 2009). Since neither CO nor ozone is well mixed in the atmosphere, the
location of the CO perturbation affects its climate impact. CO emissions in
the tropics have a greater impact on ozone radiative forcing than emissions
at high latitudes (Bowman and Henze, 2012) due the intense photochemistry in
the tropics as well as the presence of deep convection, which can loft ozone
precursors to the upper troposphere where the ozone radiative forcing is
greatest (Fry et al., 2013; Naik et al., 2005).</p>
      <p>While a large number of modeling studies have investigated the sources,
transport, and distribution of CO, global models often show major biases
compared to observations. A study of 26 atmospheric chemistry models found
that the simulated CO was biased low in the extratropical Northern Hemisphere
(NH; Shindell et al., 2006) compared to satellite observations from
MOPITT (Measurements of Pollution in the Troposphere; Emmons et al., 2004) and surface observations, especially during
spring. Shindell et al. (2006) attribute this bias primarily to an
underestimate in NH CO emissions, particularly from
Asia. Monks et al. (2015) found that Arctic CO is biased low in the
multi-model POLARCAT Model Intercomparison Project (POLMIP) and identified
differences in global OH concentrations as a major driver of the inter-model
differences in Arctic CO. The multi-model mean of the Atmospheric Chemistry
and Climate Model Intercomparison Project (ACCMIP) simulations also shows a
negative bias compared to both MOPITT and surface observations in the
northern extratropics (Naik et al., 2013). Naik et al. (2013) found that
ACCMIP models underestimate the methane and methyl chloroform lifetimes
compared to the observation-based estimates of Prinn et al. (2005) and
Prather et al. (2012) and produce a high bias in the NH to Southern Hemisphere
(SH) ratio of OH, consistent with the underestimate of NH CO. A
recent comparison of simulated and observed methyl chloroform levels also
indicates that the NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH ratio is 0.97 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.12 rather than
the value of 1.28 calculated by the ACCMIP models (Patra et al., 2014).
However, OH and CO are major losses for each other, complicating the
determination of how much CO bias drives OH bias versus OH bias driving CO
bias.</p>
      <p>Previous studies used models to examine the consistency of CO emission
estimates with surface and satellite observations of CO concentration. A
modeling study by Duncan et al. (2007a) showed that their model compared
well to observations in the NH extratropics, but they point out that a low
bias in their model emissions may have been compensated for by an assumption
made in their simplified chemical scheme that non-methane hydrocarbons
(NMHCs) oxidize to CO immediately upon release; this assumption is valid
during summer months for short-lived NMHCs (e.g., alkenes, isoprene) but is
not valid in winter and spring for longer-lived NMHCS (e.g., alkanes). Stein
et al. (2014) found that a combination of higher winter traffic emissions
from North America and Europe and reduced dry deposition during boreal
winter improved the agreement between simulated and observed CO. These
findings are consistent with inversions of MOPITT CO data that show that
including greater winter emissions from the NH reduces the negative bias in
springtime CO at northern latitudes (Petron et al., 2004).</p>
      <p>Kopacz et al. (2010) inverted CO observations from multiple satellites and
concluded that northern midlatitude CO sources were underestimated in
winter, and that implementing large seasonal variations in emissions
improved model agreement with observations. The inversion study of
Fortems-Cheiney et al. (2011) also found that the posterior CO emissions had
large seasonality in the NH, with the maximum occurring in spring. However,
the source strengths estimated by inversions are influenced by factors such
as model transport (Arellano and Hess, 2006) and the concentrations of other
species that interact with CO through OH chemistry (Pison et al., 2009;
Muller and Stavrakou, 2005; Jones et al., 2009). Given the complexities of
the nonlinear CO–OH–CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> system, we conduct a series of sensitivity
studies in which we adjust individual inputs to a chemistry climate model
(CCM) one at a time.</p>
      <p>Uncertainty in the tropospheric burden and distribution of OH leads to
further uncertainty in the CO budget. Hooghiemstra et al. (2011) found that
higher NH OH concentrations led to higher anthropogenic CO emissions in
their inversion study, while lower OH concentrations over tropical land
masses and the SH led to lower biomass burning CO emissions and less CO from
NMHCs. Duncan et al. (2007a) found that reducing OH by 20 % globally
improved the comparison of their simulated CO with surface observations in
some locations but degraded the comparison at other locations. Patra et al. (2014) suggested that top-down emission estimates from models with much
higher OH in the NH than SH likely overestimate NH countries' emissions of
CO and other reactive species. Mao et al. (2013) found that including
conversion of HO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> to H<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>O on aerosols reduced OH concentrations in
a global model, correcting much of the negative model bias in the
extratropical NH, with the largest CO increase occurring in spring.</p>
      <p>Accurate simulation of tropospheric OH requires models to represent multiple
drivers of atmospheric OH concentrations. Holmes et al. (2013) found that
temperature, water vapor, stratospheric ozone, and emissions from biomass
burning and lightning could together explain most of the interannual
variability in methane lifetime against OH. Duncan and Logan (2008) found
that changes in the ozone column were a major driver of OH variability over
1988–1997. Murray et al. (2013) found that lightning was more important for
OH variability over 1998–2006, when there was less variability in the
overhead ozone column. Murray et al. (2014) found that, on
glacial–interglacial timescales, OH concentrations were proportional to the
tropospheric ozone photolysis rate, specific humidity, and reactive nitrogen
emissions, and inversely proportional to CO emissions. The present study
investigates the sensitivity of simulated CO and methane lifetime to biases
in some of these processes.</p>
      <p>Understanding the causes and implications of CO bias in CCMs is important
for climate prediction as it may indicate or contribute to biases in methane
and ozone and their respective radiative forcing contributions. The goal of
this study is to quantify the relationship of the extratropical NH CO bias
seen in CCMs with bias in oxidant concentrations and methane lifetime. Our
focus is primarily on NH spring and summer, when the NH CO bias is large. We
use the GEOS-5 Chemistry Climate Model (GEOSCCM) to investigate how
attributing a CCM's CO bias to CO emissions versus OH chemistry impacts
ozone and methane lifetime. We also quantify the contribution of model
biases in other constituents such as ozone and water vapor to the simulated
OH and CO distributions and methane lifetime.</p>
</sec>
<sec id="Ch1.S2">
  <title>Methods</title>
<sec id="Ch1.S2.SS1">
  <title>Constituent observations and assimilated fields</title>
      <p>Our primary constraint on the model CO distribution comes from surface
observations from the NOAA Global Modeling Division (GMD) network (Novelli
and Masarie, 2014). We use the monthly mean data. The MOPITT instrument on
the Terra satellite provides additional constraints on the CO distribution.
MOPITT provides almost global coverage every 3 days from March 2000 to
present (Edwards et al., 2004). We use the level 3 CO column data from the
MOPITT version 5 thermal infrared (TIR) product (Deeter et al., 2011, 2013).</p>
      <p>Observations of tropospheric ozone are important for constraining the source
of OH. Ziemke et al. (2011) created a climatology of tropospheric column
ozone (TCO) based on the difference between the stratospheric column ozone
(SCO) from the Microwave Limb Sounder (MLS) and total ozone column data from
the Ozone Monitoring Instrument (OMI). The observations are cloud-filtered,
so there is sensitivity throughout the troposphere, although there is some
reduction in retrieval efficiency in the lower troposphere. We use the TCO
product for 2004–2010 to constrain the tropospheric ozone column.
Stratospheric ozone is also important for constraining the OH source due to
its effect on photolysis (Rohrer and Berresheim, 2006). We use the Global
Modeling and Assimilation Office (GMAO) ozone assimilation product for
2005–2010 to constrain stratospheric ozone concentrations. The GMAO
assimilated ozone product, described in Ziemke et al. (2014) and Wargan et al.
(2015), is a gridded product that was created by ingesting MLS ozone profiles
and OMI total column ozone into the GEOS-5 assimilation system.</p>
      <p>Water vapor is another important influence on OH concentrations. We use
specific humidity from the Modern-Era Retrospective Analysis for Research
and Applications (MERRA) (Rienecker et al., 2011).</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Model and methodology</title>
      <p>Our analysis uses the GEOSCCM to assess possible causes and impacts of CO
and OH bias. After spin-up, we conduct a series of time slice simulations of
1999–2009 with fixed emissions using observed sea surface temperatures
(SSTs) to drive the CCM meteorology, and then average our results over all
years of the time slice. All simulations use the Fortuna version of GEOS-5
(Molod et al., 2012) and have 2<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> latitude by 2.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> longitude
horizontal resolution and 72 vertical levels.</p>
      <p>We use a series of sensitivity studies to analyze the role of CO emissions,
OH concentrations, and transport. Two methods are used to examine the
sensitivity of CO concentrations to CO emissions from different sources:
scaling up the CO emissions, and scaling up CO tracers tagged by source. We
quantify the sensitivity of CO to OH concentrations by applying scaling
factors to the OH field. We analyze the sensitivity to transport by
comparing a free-running CCM simulation with a simulation that has
prescribed meteorology. Several different chemistry options within the
GEOSCCM framework are used to isolate specific processes. We describe each
chemistry option and associated experiments below and in Table 1.</p>
<sec id="Ch1.S2.SS2.SSS1">
  <title>GMI chemistry option</title>
      <p>GEOSCCM integrates the chemistry mechanism of the Global Modeling Initiative
(GMI) chemistry and transport model (CTM; Duncan et al., 2007b; Strahan et al., 2007) into the GEOS-5
Atmospheric GCM (AGCM). The GMI chemistry includes a comprehensive mechanism
of tropospheric and stratospheric chemistry, including 117 species and over
400 reactions. The reference simulation for this study, hereafter called
RefGMI, is the year 2000 time slice simulation conducted for the ACCMIP
intercomparison. The configuration of the ACCMIP simulations is described in
Lamarque et al. (2013). The biases in CO and methane lifetime seen in the
GEOSCCM simulation are similar to those seen in the ACCMIP multi-model mean
(Naik et al., 2013). Consequently, our analyses of bias in the GEOSCCM are
likely applicable to other CCMs as well. We use the GMI chemistry option to
quantify the impact of changes in CO emissions on methane, OH, and ozone.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS2">
  <title>CO-only option</title>
      <p>GEOSCCM includes a CO-only option to “tag” CO according to source type or
location (Bian et al., 2010). This simplified chemistry option allows us to
separate the contributions of different CO sources and to quantify the
impact of a specific change in OH. In this chemistry option, the loss of CO
is calculated based on prescribed OH fields, so changes in CO do not feed
back onto OH. Our reference tagged-CO simulation, called RefCOonly, uses
monthly OH fields archived from the RefGMI simulation, and the CO sources
from methane and isoprene oxidation are calculated using monthly methane and
isoprene fields archived from RefGMI as well. Emissions and other forcings
are chosen to parallel the RefGMI simulation; however, the CO-only option
includes an amplification factor for anthropogenic and biomass burning CO
emissions to account for the absence of co-emitted NMHCs (Duncan et al.,
2007a). We use the CO-only option to calculate the influence of specific
sources on CO concentrations, and to isolate the impact of specific changes
in OH on CO.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p>Description of reference and sensitivity simulations used
in this study with each chemistry option.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="85.358268pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="170.716535pt"/>
     <oasis:colspec colnum="3" colname="col3" align="justify" colwidth="170.716535pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Simulation</oasis:entry>  
         <oasis:entry colname="col2">Description</oasis:entry>  
         <oasis:entry colname="col3">Key result</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col3" align="left">GMI chemistry simulations </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">RefGMI*</oasis:entry>  
         <oasis:entry colname="col2">ACCMIP time slice simulation for 2000</oasis:entry>  
         <oasis:entry colname="col3">CO biased low at high latitudes</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">GMI-HiEmis</oasis:entry>  
         <oasis:entry colname="col2">Increased CO emissions compared to RefGMI</oasis:entry>  
         <oasis:entry colname="col3">Regional CO biases compared to MOPITT</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col3" align="left">CO-only simulations </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">RefCOonly*</oasis:entry>  
         <oasis:entry colname="col2">Tagged-CO version of RefGMI</oasis:entry>  
         <oasis:entry colname="col3">Similar CO biases to RefGMI</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">COonlyLowNHOH</oasis:entry>  
         <oasis:entry colname="col2">NH OH uniformly decreased by 20 %</oasis:entry>  
         <oasis:entry colname="col3">Improves agreement with GMD CO observations</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">COonlySD</oasis:entry>  
         <oasis:entry colname="col2">Meteorology constrained by MERRA (specified dynamics)</oasis:entry>  
         <oasis:entry colname="col3">Improves agreement with GMD CO observations in summer</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col3" align="left">CO–OH simulations </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">RefCO–OH*</oasis:entry>  
         <oasis:entry colname="col2">Parameterized OH version of RefGMI</oasis:entry>  
         <oasis:entry colname="col3">Lower OH than RefGMI</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">CO–OHSensTCO</oasis:entry>  
         <oasis:entry colname="col2">Tropospheric ozone column adjusted to match OMI/MLS TCO</oasis:entry>  
         <oasis:entry colname="col3">2.5 % increase in CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> lifetime</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">CO–OHSensStO3</oasis:entry>  
         <oasis:entry colname="col2">Stratospheric O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> adjusted to match assimilated O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">2.4 % increase in CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> lifetime</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">CO–OHSensQ</oasis:entry>  
         <oasis:entry colname="col2">Tropospheric water vapor adjusted based on MERRA</oasis:entry>  
         <oasis:entry colname="col3">5.7 % increase in CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> lifetime</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">CO–OHSensNOx</oasis:entry>  
         <oasis:entry colname="col2">30 % decrease in NH NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> concentrations</oasis:entry>  
         <oasis:entry colname="col3">3.5 % increase in CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> lifetime; OH asymmetry reduced but not eliminated</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">CO–OHSensAll</oasis:entry>  
         <oasis:entry colname="col2">Tropospheric and stratospheric O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>, water vapor, and NH NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> all adjusted</oasis:entry>  
         <oasis:entry colname="col3">15 % increase in CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> lifetime; OH asymmetry reduced but not eliminated</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p>* Reference simulation</p></table-wrap-foot></table-wrap>

      <p>The GEOSCCM includes an option to constrain the meteorology with MERRA or
any GMAO assimilation product. The simulation is pulled towards the MERRA
analysis through application of an incremental analysis update (Bloom et
al., 1996), calculated every 6 hours from comparison of the simulation
with the analysis. We conduct a CO-only simulation with specified dynamics
from MERRA, which we refer to as COonlySD, where “SD” stands for
“specified dynamics”. The COonlySD simulation has the same emissions and
OH field as RefCOonly, but the tracer transport will differ between the two
simulations.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS3">
  <title>CO–OH option</title>
      <p>A third chemistry option within the GEOSCCM is the CO–OH option (Duncan et
al., 2000, 2007a). This chemistry option is of intermediate
complexity between the GMI and tagged-CO options. This option is similar to
the CO-only option except that OH is calculated interactively, providing a
feedback between CO and OH concentrations. In our reference simulation with
this option, RefCO–OH, chemistry inputs to the parameterization of OH such
as ozone, NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula>, CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, and NMHC concentrations are prescribed from
the archived monthly output of the RefGMI simulation. The temperature, water
vapor, and irradiance-related variables input to the parameterization are
calculated within the CCM. Since the parameterization was only designed to
provide tropospheric OH values, we use the results of the parameterization
from the surface to 300 hPa, and archived OH fields taken from the RefGMI
simulation above 300 hPa. The CO emission amplification factors are adjusted
slightly downward compared to the CO-only simulation to bring the RefCO–OH
simulation into better agreement with the RefGMI simulation. We use the
CO–OH option to examine how biases in a particular model field such as ozone
affect OH and CO concentrations.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Results</title>
      <p>We use the three chemistry options of the GEOSCCM to separate the
contributions of emissions, chemistry, and transport to model bias in CO and
methane lifetime. In Sect. 3.1, we compare the CO distribution simulated
by the three options to observations and discuss the consistencies and
differences between simulations. We analyze the impacts of increasing
emissions, decreasing OH, and changing model transport on the CO
distribution in Sect. 3.2, and we examine how changing CO emissions affects
ozone and OH in Sect. 3.3. In Sect. 3.4, we investigate the contribution
of known model biases to simulated OH and methane lifetimes. Table 1
summarizes the key results of each of the sensitivity studies.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F1" specific-use="star"><caption><p>Simulated annual zonal mean OH concentration for the RefGMI
<bold>(a)</bold>
and RefCO–OH simulations <bold>(b)</bold> averaged over 1999–2009. <bold>(c)</bold> The annual cycle of
the pressure-weighted column mean OH by latitude from the RefGMI simulation.
The column is averaged between the surface and 200 hPa. <bold>(d)</bold> The annual cycle
of hemispheric mean OH from the RefGMI (solid lines) and RefCO–OH (dashed
lines) simulations for the Northern Hemisphere (black lines) and Southern
Hemisphere (gray lines).</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f01.pdf"/>

      </fig>

      <?xmltex \floatpos{p}?><fig id="Ch1.F2" specific-use="star"><caption><p>Monthly mean GMD observations (black) and results from the RefGMI
(purple), RefCOonly (green), and RefCO–OH (orange) simulations. Circles and
error bars represent the mean and min–max range, respectively, for
1999–2009. The GMD sites are as follows: <bold>(a)</bold> Ny-Alesund, Svalbard (ZEP,
78.9<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 11.9<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E); <bold>(b)</bold> Barrow, Alaska (BRW,
71.3<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 156.6<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W); <bold>(c)</bold> Trinidad Head, California (THD,
41.0<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 124.2<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W); <bold>(d)</bold> Izana, Tenerife, Canary Islands
(IZO, 28.3<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 16.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W); Tutuila, American Samoa (SMO,
14.2<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S, 170.6<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W); and <bold>(e)</bold> Cape Grim, Tasmania (CGO,
40.7<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S, 144.7<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> E).</p></caption>
        <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f02.pdf"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p>Latitudinal distribution of CO observations from the GMD network
(black circles) and simulated CO from the RefCOonly simulation (purple
stars) averaged over March–August. Blue–green <inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> signs indicate the effect of
<bold>(a)</bold> increasing the Asian anthropogenic CO tracer, <bold>(b)</bold> increasing the tropical
biomass burning CO tracer, and <bold>(c)</bold> decreasing OH globally by 5 or 10 %, or
decreasing NH OH by 20 %.</p></caption>
        <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f03.pdf"/>

      </fig>

<sec id="Ch1.S3.SS1">
  <title>Comparison of OH and CO in the reference simulations and observations</title>
      <p>This section presents a comparison of CO and OH distributions from the
RefGMI, RefCOonly, and RefCO–OH simulations to each other and to
observations. The choice of chemistry option affects the CO and OH
distributions produced by the GEOSCCM. Annually averaged OH is higher in the
RefGMI simulation in both hemispheres (Table 2; Fig. 1). High OH values
extend further down in the troposphere in RefGMI than in RefCO–OH. Global
annual mean mass-weighted tropospheric OH is approximately 7 % lower in
RefCO–OH than in RefGMI, but the NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH ratio is marginally higher: 1.22
instead of 1.19. Prather et al. (2012) report an observation-based estimate
of methane lifetime of 9.1 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.9 years, and a methane lifetime
against tropospheric OH of 11.2 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 1.3 years. The lifetimes of
methyl chloroform and methane against tropospheric OH in the RefGMI
simulation are 5.9 and 9.6 years, respectively (Table 2). The lifetimes of
methyl chloroform and methane against tropospheric OH in the RefCO–OH
simulation are 6.4 and 10 years, respectively, within the uncertainty
of the observation-based estimates. The seasonal cycles are similar in both
simulations, but the difference in NH OH is larger in the first half of the
year than the second half (Fig. 1d). Consequently, when using the CO–OH
option, we present the changes due to a given factor rather than the
absolute values of CO, OH, and methane lifetime for easier comparison with
the other simulations.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2"><caption><p>Tropospheric OH concentrations and lifetimes against
oxidation by tropospheric OH.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.90}[.90]?><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">RefGMI</oasis:entry>  
         <oasis:entry colname="col3">GMI-</oasis:entry>  
         <oasis:entry colname="col4">RefCO–</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">HiEmis</oasis:entry>  
         <oasis:entry colname="col4">OH</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">Global mean OH (10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula> molec cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">1.14</oasis:entry>  
         <oasis:entry colname="col3">1.11</oasis:entry>  
         <oasis:entry colname="col4">1.05</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">SH OH (10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula> molec cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">1.03</oasis:entry>  
         <oasis:entry colname="col3">1.02</oasis:entry>  
         <oasis:entry colname="col4">0.943</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">NH OH (10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula> molec cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">1.22</oasis:entry>  
         <oasis:entry colname="col3">1.18</oasis:entry>  
         <oasis:entry colname="col4">1.15</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH</oasis:entry>  
         <oasis:entry colname="col2">1.19</oasis:entry>  
         <oasis:entry colname="col3">1.16</oasis:entry>  
         <oasis:entry colname="col4">1.22</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> lifetime (years)</oasis:entry>  
         <oasis:entry colname="col2">9.65</oasis:entry>  
         <oasis:entry colname="col3">9.89</oasis:entry>  
         <oasis:entry colname="col4">10.5</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>CCl<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> lifetime (years)</oasis:entry>  
         <oasis:entry colname="col2">5.91</oasis:entry>  
         <oasis:entry colname="col3">6.06</oasis:entry>  
         <oasis:entry colname="col4">6.39</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p>Figure 2 shows the annual cycle of simulated CO and observations from six
GMD sites selected to represent a range of latitudes. Observations are
averaged over the period from 1999 to 2009, with the exception of Trinidad
Head, which is averaged over 2002–2009. The RefGMI simulation (purple) is
biased low at the NH sites, with the bias most prominent during the first
half of the year, especially NH spring. The simulation shows less bias at
the SH sites, but some negative bias is evident in SH spring. The RefCOonly
simulation (green) shows similar results to RefGMI, including a large
negative bias in the NH in spring. Consequently, diagnosing the cause of
bias in the RefCOonly simulation can provide insight into the bias in the
RefGMI simulation.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><caption><p>The impact of increasing the tagged-CO tracers for Asian
anthropogenic (<inline-formula><mml:math display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, tropical biomass burning (stars), Russian biomass
burning (diamonds), European anthropogenic (triangles), biogenic (squares),
and North American anthropogenic (x) sources on <bold>(a)</bold> bias in the
inter-hemispheric gradient versus global mean bias and <bold>(b)</bold> correlation versus
global mean bias compared to GMD observations from March to May. Large circles
represent the RefGMI (red), RefCOonly (black), and COonlySD (purple)
simulations. Small circles show the impact of changing global or NH OH in
the RefCOonly simulation.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f04.pdf"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><caption><p>As in Fig. 4 but for June through August.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f05.pdf"/>

        </fig>

      <p>The RefCO–OH simulation (orange) shows less springtime bias compared to
observations than the RefGMI and RefCOonly simulations. However, its annual
cycle is shifted later, resulting in more negative biases in
September–December at the higher northern latitudes. The difference between
the RefCO–OH and the other two reference simulations is explained by the
differences in the OH field calculated by the parameterization compared to
that calculated by the GMI chemistry mechanism. In April, when the greater
NH bias of the RefGMI simulation is most evident (Fig. 2), the RefGMI OH is
markedly higher than the OH in RefCO–OH (Fig. 1).</p>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Sensitivity of simulated CO to sources, OH, and transport</title>
      <p>We conduct a series of sensitivity studies to examine possible causes of the
bias in NH CO seen in the RefGMI and RefCOonly simulations during spring
and summer. We focus on spring, since it is the season with the largest bias
in NH OH (Fig. 2), and contrast the spring results with those from summer,
since the bias persists into summer despite seasonal differences in
transport and chemistry.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><caption><p>CO for March through May of 1999–2009 from the GMD observations
(circles) overplotted on the surface CO from <bold>(a)</bold> RefGMI, <bold>(b)</bold> GMI-HiEmis, <bold>(c)</bold>
RefCOonly, and <bold>(d)</bold> COonlyLowNHOH simulations.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f06.pdf"/>

        </fig>

<sec id="Ch1.S3.SS2.SSS1">
  <title>Sensitivity of CO-only simulations to sources and OH</title>
      <p>Adjusting the strength of midlatitude CO sources can reduce the bias in the
interhemispheric CO gradient. We use CO-only simulations to examine the
impact of increasing specific sources of CO. Following the method of Strode
and Pawson (2013), we estimate the impact of increasing a particular source
by increasing the tagged-CO tracer for that source and then re-computing
total CO. We impose increases of 10, 20, 50, 100, and
150 % for each tagged tracer. Figure 3 shows how the increased Asian
anthropogenic CO (COaa) or tropical biomass burning CO (COtrbb) alters the
comparison between modeled CO and the GMD CO observations as a function of
latitude taken as an average of March to August. Similar results are present
for spring and summer individually. An increase in COaa of approximately
100 % removes the negative bias at high-latitude sites but has little
effect on the small negative bias at low latitudes (Fig. 3a). CO transported
southward from Asia encounters higher OH than that transported northward,
leading to a shorter lifetime (Duncan and Logan, 2008). Increasing COtrbb
improves the model agreement with observations at low latitudes but creates
overestimates at some tropical sites while providing only a modest reduction
in the high-latitude bias (Fig. 3b).</p>
      <p>We examine the impact of reducing OH concentrations globally or only in the
NH in our CO-only simulation and find that a large decrease in NH OH is
effective in reducing the high-latitude CO bias. Naik et al. (2013) found
that the ACCMIP multi-model mean underestimated annual mean tropospheric OH
by 5–10 % globally. The NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH ratios in the ACCMIP multi-model mean and
GEOSCCM ACCMIP simulation are 1.28 and 1.18, respectively (Naik et al.,
2013), compared to the Patra et al. (2014) estimate of 0.97 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.12. Figure 3c shows that reducing OH throughout the year by 5–10 %
leads to a small increase in CO across all latitudes, yielding a small
reduction in the bias compared to GMD observations. Decreasing OH by 20 %
in the NH only leads to a large improvement in high-latitude CO compared to
observations, with only a small effect in the Southern Hemisphere.</p>
</sec>
<sec id="Ch1.S3.SS2.SSS2">
  <title>Impact of sources and OH on global mean and inter-hemispheric gradient bias
in CO</title>
      <p>We find that achieving zero bias in both the inter-hemispheric gradient
(IHG) and the global mean would require changes in multiple emission
sources. Figure 4 illustrates how changing the concentrations of several
tagged-CO tracers, as well as OH, impacts the global mean bias, IHG bias,
and correlation (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> of the simulated CO compared to the GMD
observations for March through May. Increasing anthropogenic CO from Asia
(COaa), Europe (COea), or North America (COnaa), or increasing Russian
biomass burning (COrubb) reduces the bias in the IHG as well as in the
global mean. Increasing CO from tropical biomass burning (COtrbb) leads to a
smaller reduction in the IHG bias, while increasing CO from biogenic
emissions (CObio) reduces the mean bias with little effect on the IHG (Fig. 4a). Consequently, increases in both groups of emissions are necessary to
simultaneously remove the global mean bias and correct the IHG.</p>
      <p>A similar analysis for June through August (Fig. 5) shows that increasing
COaa, COea, COnaa, or COrubb can eliminate the majority of the bias in both
the global mean and the IHG in summer. Increasing COrubb is more effective
in summer than spring since boreal biomass burning emissions are larger in
summer. In contrast to the spring results, increasing COtrbb in summer leads
to greater bias in the IHG. This difference occurs because tropical biomass
burning occurs primarily north of the Equator in March and April but shifts
to the Southern Hemisphere in June, July, and August.</p>
      <p>While increases in COaa, COea, COnaa, and COrubb show similar slopes for IHG
versus global mean bias, increasing COnaa reduces the correlation with
observations, whereas increasing the other sources yields a slight
improvement in correlation (Figs. 4b, 5b). Increases in both COtrbb and CObio
reduce the correlation with observations in summer, but the effect is also
present for CObio in spring. We therefore exclude increases in COnaa and
CObio in the rest of our study.</p>
      <p>Figures 4 and 5 also show the impact of changing OH. The sensitivity of CO
to changes in OH is location dependent, with higher sensitivity in regions
without strong local CO sources (Holloway et al., 2000). Reducing OH
globally reduces both the IHG and global mean bias. However, reducing OH by
20 % in the NH only yields a greater reduction in both biases as well as
the greatest improvement in correlation. We refer to the simulation with the
20 % decrease in NH OH as COonlyLowNHOH.</p>
</sec>
<sec id="Ch1.S3.SS2.SSS3">
  <title>Impact of adjusting sources versus NH OH on comparison to observations</title>
      <p>We next compare the impact of increasing emissions with that of reducing NH
OH by 20 %. We compare the COonlyLowNHOH scenario with a simulation called
GMI-HiEmis that includes increased CO emissions, further described in
Sect. 3.3. The RefCOonly simulation shows a similar surface CO
distribution to RefGMI (Fig. 6a, c). The COonlyLowNHOH scenario (Fig. 6d)
improves the agreement with the remote high-latitude sites compared to the
RefCOonly simulation, but like the HiEmis case (Fig. 6b) it leads to an
overestimate of CO concentrations over Europe and the eastern United States.
Consequently, a combination such as reduced NH OH and reduced emissions over
the eastern USA is likely needed to reconcile the simulated CO with
observations.</p>
      <p>Sparse surface data makes it difficult to determine from comparison with GMD
observations whether the higher CO seen in GMI-HiEmis and COonlyLowNHOH is
realistic (Fig. 6), so we also compare the four simulations shown in Fig. 6 to the CO column from MOPITT. Both the RefGMI and RefCOonly simulations
show a large negative bias in NH CO compared to MOPITT (Fig. 7a, c). The
GMI-HiEmis and COonlyLowNHOH simulations both reduce this negative bias
(Fig. 7b, d), but the increased emissions of the GMI-HiEmis simulation lead
to a greater overestimate of CO over east Asia and Indonesia. Furthermore,
eliminating the increase in COea to reduce the high bias compared to surface
observations over Europe and compensating with a larger adjustment in Asian
CO would lead to an even greater bias over Asia compared to MOPITT.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p>March through May difference between the simulated CO columns and
MOPITT averaged over 2000–2009 for the <bold>(a)</bold> RefGMI, <bold>(b)</bold> GMI-HiEmis, <bold>(c)</bold>
RefCOonly, and <bold>(d)</bold> COonlyLowNHOH simulations. The simulated CO is convolved
with the MOPITT averaging kernels and a priori.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f07.pdf"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><caption><p><bold>(a)</bold> Annual cycle of surface CO in the RefCOonly simulation
(circles) and COonlySD simulation (triangles) for 30–90<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N (black), 30<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–30<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N (cyan), and
90–30<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S (magenta). <bold>(b)</bold> Annual zonal mean cross
section of the difference in CO between the COonlySD and RefCOonly
simulations.</p></caption>
            <?xmltex \igopts{width=156.490157pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f08.pdf"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS2.SSS4">
  <title>CO sensitivity to transport</title>
      <p>Transport, in addition to chemistry and emissions, plays a role in the IHG
of CO. The simulations discussed so far are free-running CCM simulations
driven by SSTs, since our goal is to understand the biases seen in CCM
studies such as ACCMIP. Consequently, the simulated tracer transport is
affected by any differences between the simulated and actual meteorology. We
examine the sensitivity of the CO bias to model transport by comparing
RefCOonly, which is a free-running CCM simulation, with the COonlySD
simulation, which has year-specific meteorology from MERRA. The largest
difference between the simulations occurs poleward of 30<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N
during July through October (Fig. 8a). The use of specified
meteorology makes only a small difference in the global mean and IHG CO
biases compared to surface observations in March–May (Fig. 4), but it leads to
a large reduction in bias as well as improved spatial correlation with the
GMD observations in June–August (Fig. 5). The biases in global mean CO and
the CO IHG are <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>3.5 and <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>6.6 %, respectively, in COonlySD, compared to
<inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>11 and <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>26 %, respectively, in RefCOonly. More CO from Northern
Hemisphere anthropogenic and boreal biomass burning sources remains in the
lower troposphere and reaches the high latitudes in COonlySD, whereas more
is transported to the upper troposphere in RefCOonly (Fig. 8b).</p>
</sec>
</sec>
<sec id="Ch1.S3.SS3">
  <?xmltex \opttitle{Impact of increased CO emissions on ozone, OH, and CH${}_{{{4}}}$
lifetime}?><title>Impact of increased CO emissions on ozone, OH, and CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>
lifetime</title>
      <p>The tagged tracer results presented in Sect. 3.2.2 suggest that increasing
CO emissions can improve the agreement with CO surface observations.
However, increasing CO emissions will lead to feedbacks on OH, CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, and
ozone that are not captured by the CO-only chemistry option. We therefore
conduct a sensitivity simulation with the GMI chemistry option called
GMI-HiEmis, which is identical to the RefGMI simulation except for an increase
in CO emissions. Since trace gases in the GMI option of the GEOSCCM are
radiatively coupled to the underlying GCM, altering emissions within this
option produces feedbacks between CO, ozone, CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula>, and radiation and
transport.</p>
      <p>The results shown in Figs. 4 and 5 suggest that increasing CO from
tropical biomass burning along with Asian anthropogenic, European
anthropogenic, and Russian biomass burning CO can eliminate both the IHG
and global mean bias. We therefore adjust the emissions for winter, spring,
and summer in the GMI-HiEmis simulation based on the biases and tagged
tracer sensitivities for the season. We do not alter the September–December
emissions since the RefGMI simulation shows little NH bias in those
months (Fig. 2) and our focus is on spring and summer. We choose the
adjustment factors by solving for the linear combination of
COaa<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>COea<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>COrubb and COtrbb that minimizes the error in both the IHG and
the global mean bias. Table 3 shows the emissions adjustments for each
season. We apply the same adjustment to COaa, COea, and COrubb since these
three sources show nearly the same slope (IHG bias/model bias) in Figs. 4 and 5. The purpose of this experiment is not to calculate the optimum CO
emissions to reproduce the CO observations, but rather to determine how a
reasonable set of CO emission adjustments impacts the simulated
concentrations of ozone and OH as well as CO.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><caption><p>CO emission adjustment for the high-emission simulation
compared to the standard simulation.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Emission increase (%)</oasis:entry>  
         <oasis:entry rowsep="1" namest="col2" nameend="col5">Months </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Jan–Feb</oasis:entry>  
         <oasis:entry colname="col3">Mar–May</oasis:entry>  
         <oasis:entry colname="col4">Jun–Aug</oasis:entry>  
         <oasis:entry colname="col5">Sep–Dec</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">Asian &amp; European anthropogenic; Russian BB</oasis:entry>  
         <oasis:entry colname="col2">17.4</oasis:entry>  
         <oasis:entry colname="col3">45.0</oasis:entry>  
         <oasis:entry colname="col4">63.2</oasis:entry>  
         <oasis:entry colname="col5">0.00</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Tropical BB</oasis:entry>  
         <oasis:entry colname="col2">26.4</oasis:entry>  
         <oasis:entry colname="col3">60.6</oasis:entry>  
         <oasis:entry colname="col4">28.2</oasis:entry>  
         <oasis:entry colname="col5">0.00</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p>Including larger CO emissions increases the loss of OH, reducing OH
concentrations. The mass-weighted global mean tropospheric OH in the
GMI-HiEmis simulation is <inline-formula><mml:math display="inline"><mml:mrow><mml:mn>1.11</mml:mn><mml:mo>×</mml:mo><mml:mn>10</mml:mn></mml:mrow></mml:math></inline-formula><inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">6</mml:mn></mml:msup></mml:math></inline-formula> molec cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, a 3 % decrease
compared to the RefGMI simulation (Table 2). The methane lifetime against
tropospheric OH also increases slightly, from 9.6 years in the RefGMI
simulation to 9.9 years in the HiEmis simulation. This slightly improves the
agreement with the observation-based estimate of 11.2 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 1.3 years of
Prather et al. (2012). Since the decrease in OH occurs primarily in the
Northern Hemisphere, the NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH ratio shows a small reduction from 1.19 in
the RefGMI simulation to 1.16 in the GMI-HiEmis simulation, but the large
hemispheric asymmetry in OH remains.</p>
      <p>Both the RefGMI and GMI-HiEmis simulation show a large high bias in NH TCO
compared to the OMI/MLS observations, as well as a low bias in the
equatorial Pacific and the extratropical SH (Fig. 9). Similar biases were
present in the ACCMIP multi-model mean (Young et al., 2013), indicating that
these biases are a common feature in CCMs. The increased CO emissions in the
GMI-HiEmis simulation slightly increase the high bias in TCO in the northern
midlatitudes, but the increase is small compared to the bias in the RefGMI
simulation.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <title>Sensitivity of OH to model biases</title>
      <p>Given the sensitivity of the CO biases to OH (Figs. 3, 4, and 5) and the
relatively small changes in OH resulting from the increased CO emissions in
the GMI-HiEmis simulation, we next examine how other biases in the RefGMI
simulation may impact OH concentrations and consequently the CO distribution
and methane lifetime. We conducted a series of sensitivity studies using the
CO–OH parameterization option to isolate the impact of several known model
biases on OH and CO distributions. We analyze the results for the entire
year in order to compare our results to observation-based estimates of
methane lifetime.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9" specific-use="star"><caption><p>Annual mean tropospheric column ozone (TCO) from the RefGMI <bold>(a)</bold>
and GMI-HiEmis <bold>(b)</bold> simulations compared to the OMI/MLS TCO product <bold>(c)</bold> of
Ziemke et al. (2011). Panel <bold>(d)</bold> compares the zonal mean simulated and OMI/MLS
values. The simulated values are averaged over the years of the time slice
(1999–2009).</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f09.pdf"/>

        </fig>

      <p>The primary source of OH in the troposphere is ozone photolysis followed by
reaction of O<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula>D with water vapor, and secondary production of OH occurs
through reaction of HO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> with NO or ozone (Spivakovsky et al., 2000).
Consequently, simulated OH concentrations are sensitive to errors in
NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> and ozone concentrations, water vapor, and factors that influence
photolysis such as overhead ozone column and clouds. Here, we examine the
sensitivity of OH to model biases in some of these factors.</p>
<sec id="Ch1.S3.SS4.SSS1">
  <title>Sensitivity to tropospheric ozone</title>
      <p>Comparison of output from the CCMs that participated in the ACCMIP study to
OMI/MLS TCO reveals positive biases in simulated tropospheric ozone over the
NH midlatitudes and negative biases over the tropical Pacific and SH (Young
et al., 2013), which lead to an overestimate in NH OH production and an
underestimate in SH OH production (Naik et al., 2013). The multi-model mean
tropospheric ozone also shows a high bias in the NH and low bias in the SH
compared to the Tropospheric Emission Spectrometer (TES) (Bowman et al.,
2013). A multi-species assimilation study by Miyazaki et al. (2012b) found
that assimilating TES ozone increased OH concentrations in the SH.</p>
      <p>We use the CO–OH option to investigate the impact of removing the GEOSCCM's
tropospheric ozone column bias relative to the OMI/MLS observations (Fig. 9). We scale the tropospheric ozone values input to the parameterization of
OH for each month between October 2004 and December 2010 from 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S to 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N so that the tropospheric ozone column
is unbiased compared to the OMI/MLS TCO for that month. No scaling is
applied where the TCO data are missing. We use the scaled ozone input in a
sensitivity study for October 2004 to January 2010, called CO–OHSensTCO, which
parallels the RefCO–OH simulation but uses the scaled tropospheric ozone
values in the parameterization of OH. CO–OHSensTCO shows a small (2 %)
decrease in global mean OH compared to RefCO–OH, with a 3 % decrease in NH
OH and 1 % decrease in SH OH. The increased OH leads to a 2 % increase
in both methane and methyl chloroform lifetimes against OH. The NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH
ratio decreases slightly to 1.19 (Table 4), suggesting that the IHG in the
tropospheric ozone bias makes only a minor contribution to the model's
interhemispheric OH asymmetry.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><caption><p>NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH ratio and percent changes in tropospheric OH
concentrations and lifetimes against tropospheric OH for the CO–OH
sensitivity studies compared to the RefCO–OH simulation.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">SensTCO</oasis:entry>  
         <oasis:entry colname="col3">SensStO3</oasis:entry>  
         <oasis:entry colname="col4">SensQ</oasis:entry>  
         <oasis:entry colname="col5">SensNOx</oasis:entry>  
         <oasis:entry colname="col6">SensAll</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH</oasis:entry>  
         <oasis:entry colname="col2">1.19</oasis:entry>  
         <oasis:entry colname="col3">1.23</oasis:entry>  
         <oasis:entry colname="col4">1.22</oasis:entry>  
         <oasis:entry colname="col5">1.15</oasis:entry>  
         <oasis:entry colname="col6">1.14</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col6">% change vs. RefCO–OH </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Global mean OH</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.1</oasis:entry>  
         <oasis:entry colname="col3"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.1</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>6.2</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>3.1</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>13</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">SH OH</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1</oasis:entry>  
         <oasis:entry colname="col3"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.9</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>6.3</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.3</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>10</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">NH OH</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>3.1</oasis:entry>  
         <oasis:entry colname="col3"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.5</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>6.1</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>5.7</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>16</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msub></mml:math></inline-formula> lifetime</oasis:entry>  
         <oasis:entry colname="col2">2.5</oasis:entry>  
         <oasis:entry colname="col3">2.4</oasis:entry>  
         <oasis:entry colname="col4">5.7</oasis:entry>  
         <oasis:entry colname="col5">3.5</oasis:entry>  
         <oasis:entry colname="col6">15</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">CH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>CCl<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> lifetime</oasis:entry>  
         <oasis:entry colname="col2">2.4</oasis:entry>  
         <oasis:entry colname="col3">2.3</oasis:entry>  
         <oasis:entry colname="col4">5.9</oasis:entry>  
         <oasis:entry colname="col5">3.5</oasis:entry>  
         <oasis:entry colname="col6">15</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

</sec>
<sec id="Ch1.S3.SS4.SSS2">
  <title>Sensitivity to stratospheric ozone</title>
      <p>We next examine how biases in stratospheric ozone affect OH through their
role in photolysis. Voulgarakis et al. (2013) found that changes in
stratospheric ozone and tropospheric OH in the ACCMIP models both correlated
strongly with J(O<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula>D). We conduct a sensitivity study for 2005 through
2009, CO–OHSensStO3, which parallels the RefCO–OH simulation but replaces
the simulated ozone with the GMAO ozone assimilation in the stratosphere for
input into the parameterization. The change in global mean OH in
CO–OHSensStO3 is nearly identical to that of CO–OHSensTCO, but CO–OHSensStO3
places more of the change in the SH, causing the NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH ratio to increase
to 1.23 (Table 4). The change in OH due to stratospheric ozone bias is small
in part because GEOSCCM has relatively small biases in tropical
stratospheric ozone. However, the multi-model Chemistry Climate Model
Validation-2 (CCMVal-2) study (Morgenstern et al., 2010) shows a large
spread across models for column ozone in the tropics (Austin et al., 2010).
Thus, biases in stratospheric ozone may play a larger role in tropospheric
OH in models with larger stratospheric ozone biases.</p>
</sec>
<sec id="Ch1.S3.SS4.SSS3">
  <title>Sensitivity to water vapor</title>
      <p>We investigate the impact of model biases in water vapor on OH
concentrations through its role in OH production. Inter-model differences in
OH in the POLMIP study are correlated with inter-model differences in
simulated water vapor (Monks et al., 2015). The GEOS-5 AGCM exhibits a high
bias in specific humidity compared to the MERRA reanalysis in much of the
troposphere (Molod et al., 2012), and a high bias in the midtroposphere is
also seen throughout the year in GEOSCCM compared to Atmospheric Infrared Sounder (AIRS) data (Lamarque et
al., 2013).</p>
      <p>We quantify the impact of this bias by conducting a sensitivity study,
CO–OHSensQ, that applies altitude- and latitude-dependent zonal mean scaling
factors for each month to the specific humidity provided to the OH
parameterization. The scaling factors are based on comparison of the RefGMI
simulation to MERRA and are applied in 100 hPa intervals between 900 and 200
hPa for 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S to 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N. These scaling
factors are designed to remove the mean bias in the simulated specific
humidity compared to MERRA while allowing the simulated water vapor to vary
in space and time in a manner consistent with the simulated meteorology. The
water vapor scaling is applied only to the OH parameterization and does not
impact the general circulation of the simulation. The scaling results in
lower specific humidity in the middle and upper troposphere, with the
largest percent reductions occurring between 300 and 500 hPa (Fig. 10).</p>
      <p>Simulated OH is 6 % lower in the CO–OHSensQ simulation than the RefCO–OH
simulation, and the methane and methyl chloroform lifetimes against OH are
thus 6 % longer (Table 4). Consequently, water vapor bias has a larger
impact on OH concentrations than the stratospheric or tropospheric ozone
biases in our simulations. The OH reduction is similar in both hemispheres
in the annual mean, so the NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH gradient is unchanged compare to
RefCO–OH.</p>
</sec>
<sec id="Ch1.S3.SS4.SSS4">
  <?xmltex \opttitle{Sensitivity to NO${}_{{{x}}}$}?><title>Sensitivity to NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula></title>
      <p>Anthropogenic NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions, which contribute to secondary production
of OH, are located primarily in the Northern Hemisphere. Consequently, an
overestimate of these emissions could contribute to the NH–SH asymmetry in
simulated OH. Previous studies have estimated NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions based on
satellite observations of NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> columns (Lamsal et al., 2011; Miyazaki et
al., 2012a), but some uncertainty in NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions remains. We quantify
the sensitivity of simulated OH to NH NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> with a sensitivity study,
CO–OHSensNOx, which parallels RefCO–OH but includes 30 % lower NO and
NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> concentrations in the NH. We note that in this experiment ozone
values remain the same as in RefCO–OH, rather than responding to the change
in NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula>. The reduction in NH NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions leads to a 3 %
reduction in global OH (Table 4). SH and NH OH are reduced by 0.3 % and
6 %, respectively, reducing the NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH ratio to 1.15. While this shows
that the hemispheric asymmetry in OH is affected by NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions, a
much larger redistribution of NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions would be required to
completely eliminate the asymmetry.</p>
</sec>
<sec id="Ch1.S3.SS4.SSS5">
  <title>Summary of OH sensitivities</title>
      <p>In the previous sections, we examined the sensitivity of OH and its IHG to
model biases in tropospheric and stratospheric ozone, water vapor, and NH
NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions. We find that water vapor has the largest impact on
global mean OH, while NH NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions have the largest impact on the
NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH ratio. However, none of these biases individually explains the 20 %
reduction in NH OH that would remove the interhemispheric asymmetry and
which Figs. 4 and 5 suggest are necessary to remove most of the CO bias.
We note, however, that the CO–OH option simulations do not account for all
the chemical feedbacks between ozone, methane, OH, and other species, and
they may underestimate the sensitivity of the full chemistry simulation to some
of these biases.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F10"><caption><p>Annual mean percent change in specific humidity imposed in the
CO–OHSensQ experiment between 900 and 200 hPa, 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> S–60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N.</p></caption>
            <?xmltex \igopts{width=142.26378pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f10.pdf"/>

          </fig>

      <p>Table 4 suggests that applying multiple bias corrections simultaneously
would bring our simulation into good agreement with the observation-based
estimates of global mean OH. We conduct a final sensitivity simulation,
called CO–OHSensAll, incorporating the bias corrections for tropospheric and
stratospheric ozone, as well as the specific humidity scaling and 30 %
reduction in NH NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions. This simulation results in a 13 %
reduction in global mean OH, with a 10 % reduction in the SH and 16 %
reduction in the NH. The NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH ratio is reduced to 1.14. The lifetimes of
methyl chloroform and methane in this simulation increase by 15 %.
Applying this 15 % increase in methane lifetime to the RefGMI methane
lifetime against OH of 9.6 years would yield a lifetime of 11 years,
consistent with the 11.2 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 1.3 year estimate of Prather et al. (2012).
This shows that removing the main model biases related to OH production
would bring simulated global mean OH into good agreement with
observation-based estimates, although some NH–SH asymmetry would remain.</p>
      <p>The reduction in OH in the sensitivity studies compared to RefCO–OH leads to
higher surface concentrations of CO. The bias in the global mean March–August
surface CO changes from -4 % in RefCO–OH to 3 % in
CO–OHSensAll, while the bias in the IHG changes from <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>11 to <inline-formula><mml:math display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>4 %.
Figure 11 shows the latitudinal distribution of the change in CO for each
sensitivity simulation versus RefCO–OH. The sum of the changes for
CO–OHSensTCO, CO–OHSensStO3, CO–OHSensQ, and CO–OHSensNOx, shown as the
dotted line, is similar but slightly smaller than the change for
CO–OHSensAll, indicating small nonlinearities in the system. Correcting
water vapor (CO–OHSensQ) makes a large contribution to the CO enhancement in
both hemispheres, while adjusting NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions (CO–OHSensNOx) and to a
lesser extent tropospheric ozone (CO–OHSensTCO) contributes to the larger
increase in the Northern Hemisphere.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F11"><caption><p>Zonal mean surface CO difference compared to RefCO–OH for the
CO–OHSensTCO (green), CO–OHSensStO3 (cyan), CO–OHSensQ (blue), CO–OHSensNOx
(pink), and CO–OHSensAll (solid black) simulations averaged over March
through August of 2005 to 2009. The sum of the differences for the
CO–OHSensTCO, CO–OHSensStO3, CO–OHSensQ, and CO–OHSensNOx compared to
RefCO–OH is shown as the black dotted line.</p></caption>
            <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://acp.copernicus.org/articles/15/11789/2015/acp-15-11789-2015-f11.pdf"/>

          </fig>

</sec>
</sec>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <title>Conclusions</title>
      <p>We examined possible causes of CO model bias, such as underestimated
emissions or overestimated OH, in a global CCM. An underestimate of CO
emissions can impact the chemistry–climate simulation through the
interaction of CO with methane via OH and with ozone, but we find the
effects to be small. In contrast, a CO bias due to excess OH would imply
biases in methane lifetime, further influencing the simulated climate.</p>
      <p>Either increasing emissions or decreasing Northern Hemisphere OH can remove
the bias in the latitudinal gradient of CO compared to surface observations.
However, we find that the large increases in Asian anthropogenic emissions
needed to remove the negative CO bias at remote surface sites leads to
overestimates of CO over Asia compared to MOPITT. In contrast, reducing OH
in the Northern Hemisphere improves the agreement between simulated and
observed CO concentrations. This is consistent with the finding of Patra et al. (2014) that the ratio of Northern Hemisphere to Southern Hemisphere OH
is close to 1. We note that biases in OH, CO emissions, and transport are
not mutually exclusive, and the model bias in CO is likely influenced by a
combination of these factors.</p>
      <p>The availability of satellite-based constraints on CO, ozone, and water
vapor enables us to assess model biases that affect the major sources and
sinks of OH and hence CO concentrations and methane lifetime. We used a
CO–OH parameterization to explore the effect of model biases in ozone and
water vapor on simulated OH and CO. Removing the high bias in Northern Hemisphere
tropospheric ozone, a common feature of CCMs, had only a small
effect on simulated OH and methane lifetime. A high bias in water vapor had
a larger impact on global mean OH, but removing this bias did not remove the
NH–SH asymmetry in OH. Removing both ozone and
water vapor biases, as well as decreasing Northern Hemisphere NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula>,
provided the desired increase in methane lifetime but was insufficient to
remove the hemispheric asymmetry in OH. Thus, while a NH <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> SH OH ratio near
1 improves the simulation of CO, we cannot generate this ratio in our
simulations by removing known model biases in ozone and water vapor.</p>
      <p>Our study suggests that the springtime low bias in CO at northern latitudes
often seen in CCM simulations likely indicates a bias in methane lifetime.
Improving the model representation of water vapor and ozone, as well as
reducing uncertainty in NO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>x</mml:mi></mml:msub></mml:math></inline-formula> emissions, could reduce these biases.
However, additional research is needed to understand the causes of NH–SH
asymmetry in simulated OH. Future field missions that
provide data on the latitudinal distribution of CO and oxidant sources and
losses will be valuable for understanding biases in simulated CO and OH.</p>
</sec>

      
      </body>
    <back><ack><title>Acknowledgements</title><p>Support for this work comes from NASA's Modeling, Analysis, and Prediction
Program. Computing resources were provided by the NASA High-End Computing
(HEC) Program.<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: P. Jöckel</p></ack><ref-list>
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