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<front>
<journal-meta>
<journal-id journal-id-type="publisher">ACP</journal-id>
<journal-title-group>
<journal-title>Atmospheric Chemistry and Physics</journal-title>
<abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1680-7324</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/acp-12-3511-2012</article-id>
<title-group>
<article-title>Limited-are a modelling of stratocumulus over South-Eastern Pacific</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Andrejczuk</surname>
<given-names>M.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Grabowski</surname>
<given-names>W. W.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Gadian</surname>
<given-names>A.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Burton</surname>
<given-names>R.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>School of Earth and Environment, University of Leeds,  Leeds LS2 9JT, UK</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>National Center for Atmospheric Research,  Boulder, Colorado, USA</addr-line>
</aff>
<aff id="aff3">
<label>3</label>
<addr-line>now at: Department of Physics, University of Oxford,  Oxford OX1 3PU, UK</addr-line>
</aff>
<pub-date pub-type="epub">
<day>11</day>
<month>04</month>
<year>2012</year>
</pub-date>
<volume>12</volume>
<issue>7</issue>
<fpage>3511</fpage>
<lpage>3526</lpage>
<permissions>
<copyright-statement>Copyright: &#x000a9; 2012 M. Andrejczuk et al.</copyright-statement>
<copyright-year>2012</copyright-year>
<license license-type="open-access">
<license-p>This work is licensed under the Creative Commons Attribution 3.0 Unported License. To view a copy of this licence, visit <ext-link ext-link-type="uri"  xlink:href="https://creativecommons.org/licenses/by/3.0/">https://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions>
<self-uri xlink:href="https://acp.copernicus.org/articles/12/3511/2012/acp-12-3511-2012.html">This article is available from https://acp.copernicus.org/articles/12/3511/2012/acp-12-3511-2012.html</self-uri>
<self-uri xlink:href="https://acp.copernicus.org/articles/12/3511/2012/acp-12-3511-2012.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/12/3511/2012/acp-12-3511-2012.pdf</self-uri>
<abstract>
<p>This paper presents application of the Weather Research and Forecasting (WRF)
model to limited-area modeling of atmospheric processes over the subtropical
south-eastern Pacific, with the emphasis on the stratocumulus-topped boundary
layer. The simulations cover a domain from the VAMOS (Variability of the
American Monsoon Systems) Ocean-Cloud-Atmosphere-Land Study Regional
Experiment (VOCALS-REx) field project conducted in the subtropical
south-eastern Pacific in October and November 2008. We focus on a day where
the UK&apos;s BAe-146 research aircraft encountered Pockets of Open Cells (POCs)
at the very western edge of its flight track, rather than on the entire
campaign as investigated in previous limited-area modeling studies. Model
results are compared to aircraft observations with the main conclusion that
the simulated stratocumulus-topped boundary layer is significantly too
shallow. This appears to be a combination of an already too shallow boundary
layer in the dataset used to provide initial and lateral boundary conditions,
and the inability of the WRF model to increase the boundary-layer height.
Several sensitivity simulations, applying different subgrid-scale
parameterizations available in the model, a larger computational domain and
longer simulations, as well as a different dataset providing initial and
lateral boundary conditions were all tried to improve the simulation. These
changes appeared to have a rather small effect on the results.

The model does simulate the formation of mesoscale cloud-free regions
that one might consider similar to Pockets of Open Cells observed
in nature. However, formation of these regions does not seem to be
related to drizzle-induced transition from open- to closed-cell
circulations as simulated by LES models. Instead, the cloud-free
regions appear to result from mesoscale variations of the
lower-tropspheric vertical velocity. Areas of negative vertical
velocity with minima (a few cm s&lt;sup&gt;−1&lt;/sup&gt;) near the boundary layer top seem
to induce direct evaporation of the cloud layer.  It remains to be
seen in LES studies whether the mechanism seen in the model is
realistic or if it is simply an artifact of interactions between
resolved and parameterized processes.</p>
</abstract>
<counts><page-count count="16"/></counts>
</article-meta>
</front>
<body/>
<back>
<ref-list>
<title>References</title>
<ref id="ref1">
<label>1</label><mixed-citation publication-type="other" xlink:type="simple">Abel, S. J., Walters, D. N., and Allen, G.: Evaluation of stratocumulus cloud prediction in the Met Office forecast model during VOCALS-REx, Atmos. Chem. Phys., 10, 10541–10559, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-10-10541-2010&quot;&gt;https://doi.org/10.5194/acp-10-10541-2010&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref2">
<label>2</label><mixed-citation publication-type="other" xlink:type="simple">Allen, G., Vaughan, G., Coe, H., and Minnis, P.: Gravity waves observed as a causal mechanism for transition from closed to open cellular convection in the remote South East Pacific, to be submitted, 2011.</mixed-citation>
</ref>
<ref id="ref3">
<label>3</label><mixed-citation publication-type="other" xlink:type="simple">Beljaars, A.: The parameterization of surface fluxes in large-scale models under free convection, Quart. J. Roy. Meteor. Soc., 121, 255–270, 1994.</mixed-citation>
</ref>
<ref id="ref4">
<label>4</label><mixed-citation publication-type="other" xlink:type="simple">Chen, F. and Dudhia, J.: Coupling an advanced land-surface/ hydrology model with the Penn State/ NCAR MM5 modeling system. Part I: Model description and implementation, Mon. Weather Rev., 129, 569–585, 2001.</mixed-citation>
</ref>
<ref id="ref5">
<label>5</label><mixed-citation publication-type="other" xlink:type="simple">Chou, M.-D. and Suarez, M.&amp;nbsp;J.: An efficient thermal infrared radiation parameterization for use in general circulation models, NASA Tech. Memo., 104606, 3, 85&amp;nbsp;pp., 1994.</mixed-citation>
</ref>
<ref id="ref6">
<label>6</label><mixed-citation publication-type="other" xlink:type="simple">Dyer, A.&amp;nbsp;J. and Hicks, B.&amp;nbsp;B.: Flux-gradient relationships in the constant flux layer, Quart. J. Roy. Meteor. Soc., 96, 715–721, 1970.</mixed-citation>
</ref>
<ref id="ref7">
<label>7</label><mixed-citation publication-type="other" xlink:type="simple">Hong, S., Noh, Y., and Dudhia, J.: A new vertical diffusion package with an explicit treatment of entrainment processes, Mon. Weather Rev., 134, 2318–2341, 2006.</mixed-citation>
</ref>
<ref id="ref8">
<label>8</label><mixed-citation publication-type="other" xlink:type="simple">Janic, Z.&amp;nbsp;I.: The step-mountain coordinate: physical package, Mon. Weather Rev., 118, 1429–1443, 1990.</mixed-citation>
</ref>
<ref id="ref9">
<label>9</label><mixed-citation publication-type="other" xlink:type="simple">Janic, Z.&amp;nbsp;I.: The step-mountain eta coordinate model: further developments of the convection, viscous sublayer and turbulence closure schemes, Mon. Weather Rev., 122, 927–945, 1994.</mixed-citation>
</ref>
<ref id="ref10">
<label>10</label><mixed-citation publication-type="other" xlink:type="simple">Janic, Z.&amp;nbsp;I.: The surface layer in the NCEP Eta Model, Norfolk, VA, 19–23 August, Amer. Meteor. Soc., Boston, MA, 1996.</mixed-citation>
</ref>
<ref id="ref11">
<label>11</label><mixed-citation publication-type="other" xlink:type="simple">Janic, Z.&amp;nbsp;I.: Nonsingular Implementation of the Mellor-Yamada Level 2.5 Scheme in the NCEP Meso model, NCEP Office Note, No.&amp;nbsp;437, 61, 2002.</mixed-citation>
</ref>
<ref id="ref12">
<label>12</label><mixed-citation publication-type="other" xlink:type="simple">Kessler, E.: On the distribution and continuity of water substance in atmospheric circulation, Amer. Meteor. Soc, 32, 84&amp;nbsp;pp., 1969.</mixed-citation>
</ref>
<ref id="ref13">
<label>13</label><mixed-citation publication-type="other" xlink:type="simple">Minnis, P., Sun-Mack, S., Young, D.&amp;nbsp;F., Heck, P.&amp;nbsp;W., Garber, D.&amp;nbsp;P., Chen, Y., Spangenberg, D.&amp;nbsp;A., Arduini, R.&amp;nbsp;F., Trepte, Q.&amp;nbsp;Z., Smith Jr., W.&amp;nbsp;L., Ayers, J.&amp;nbsp;K., Gibson, S.&amp;nbsp;C., Miller, W.&amp;nbsp;F., Chakrapani, V., Takano, Y., Liou, K.-N., Xie, Y., and Yang, P.: CERES Edition-2 cloud property retrievals using TRMM VIRS and Terra and Aqua MODIS data, Part {I}: Algorithms, IEEE Trans. Geosci. Remote Sens.,  in press, 2011.</mixed-citation>
</ref>
<ref id="ref14">
<label>14</label><mixed-citation publication-type="other" xlink:type="simple">Mlawer, E.&amp;nbsp;J., Taubman, S.&amp;nbsp;J., Brown, P.&amp;nbsp;D., Iacono, M.&amp;nbsp;J., and Clough, S.&amp;nbsp;A.: Radiative trans-fer for inhomogeneous atmosphere: RRTM, a validated correlated-k model for the long-wave., J. Geophys. Res., 102, 16663–16682, 1997.</mixed-citation>
</ref>
<ref id="ref15">
<label>15</label><mixed-citation publication-type="other" xlink:type="simple">Morrison, H., Thompson, G., and Tatarskii, V.: Impact of cloud micrpohysics on the development of trailing stratiform precipitation in a s:1imulated squall line: Comparison of one- and two-moment schemes., Mon. Weather Rev., 137, 991–1007, 2009.</mixed-citation>
</ref>
<ref id="ref16">
<label>16</label><mixed-citation publication-type="other" xlink:type="simple">Paulson, C.&amp;nbsp;A.: The mathematical representation of wind speed and temperature profiles in the unstable atmospheric surface layer, J. Appl. Meteorol., 9, 857–861, 1970.</mixed-citation>
</ref>
<ref id="ref17">
<label>17</label><mixed-citation publication-type="other" xlink:type="simple">Petters, M.&amp;nbsp;D., Snider, J.&amp;nbsp;R., Stevens, B., Vali, G., Faloona, I., and Russell, L.&amp;nbsp;M.: Accumulation mode aerosol, pockets of open cells, and particle nucleation in the remote subtropical Pacific marine boundary layer, J. Geophys. Res., 111, D02206, &lt;a href=&quot;http://dx.doi.org/10.1029/2004JD005694&quot;&gt;https://doi.org/10.1029/2004JD005694&lt;/a&gt;, 2006.</mixed-citation>
</ref>
<ref id="ref18">
<label>18</label><mixed-citation publication-type="other" xlink:type="simple">Pleim, J.&amp;nbsp;E.: A simple, efficient solution of flux-profile relationships in the atmospheric surface layer, J. Appl. Meteorol. Climatol., 45, 341–347, 2006.</mixed-citation>
</ref>
<ref id="ref19">
<label>19</label><mixed-citation publication-type="other" xlink:type="simple">Pleim, J.&amp;nbsp;E.: A combined local and nonlocal closure model for the atmospheric boundary layer. Part I: Model description and testing., J. Appl. Meteorol. Climatol., 46, 1383–1395, 2007.</mixed-citation>
</ref>
<ref id="ref20">
<label>20</label><mixed-citation publication-type="other" xlink:type="simple">Rahn, D. A. and Garreaud, R.: Marine boundary layer over the subtropical southeast Pacific during VOCALS-REx – Part 1: Mean structure and diurnal cycle, Atmos. Chem. Phys., 10, 4491–4506, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-10-4491-2010&quot;&gt;https://doi.org/10.5194/acp-10-4491-2010&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref21">
<label>21</label><mixed-citation publication-type="other" xlink:type="simple">Savic-Jovcic, V. and Stevens, B.: The structure and mesoscale organization of precipitating stratocumulus, J. Atmos. Sci., 65, 1587–1605, 2008.</mixed-citation>
</ref>
<ref id="ref22">
<label>22</label><mixed-citation publication-type="other" xlink:type="simple">Sharon, T.&amp;nbsp;M., Albrecht, B.&amp;nbsp;A., Jonsson, H.&amp;nbsp;H., Minnis, P., Khaiyer, M.&amp;nbsp;M., van Reken, T.&amp;nbsp;M., Seinfeld, J., and Flagan, R.: Aerosol and Cloud Microphysical Characteristics of Rifts and Gradients in Maritime Stratocumulus Clouds, J. Atmos. Sci., 63, 983–997, 2006.</mixed-citation>
</ref>
<ref id="ref23">
<label>23</label><mixed-citation publication-type="other" xlink:type="simple">Skamarock, W.&amp;nbsp;C., Klemp, J.&amp;nbsp;B., Dudhia, J., Gill, D.&amp;nbsp;O., Barker, D.&amp;nbsp;M., Duda, M.&amp;nbsp;G., Huang, X.-Y., Wang, W., and Powers, J.&amp;nbsp;G.: A Description of the Advanced Research WRF Version 3, National Center for Atmospheric Research, 2008.</mixed-citation>
</ref>
<ref id="ref24">
<label>24</label><mixed-citation publication-type="other" xlink:type="simple">Stevens, B., Vali, G., Comstock, K., Wood, R., VanZanten, M.&amp;nbsp;C., Austin, P.&amp;nbsp;H., Bretherton, C.&amp;nbsp;S., and Lenschow, D.&amp;nbsp;H.: Pockets of open cells and drizzle in marine stratocumulus, Bull. Amer. Meteorol. Soc., 86, 51–57, 2005.</mixed-citation>
</ref>
<ref id="ref25">
<label>25</label><mixed-citation publication-type="other" xlink:type="simple">Thompson, G., Rasmussen, R.&amp;nbsp;M., and Manning, K.: Explicit forecasts of winter precipitation using an improved bulk microphysics scheme. Part I: Description and sensitivity analysis., Mon. Weather Rev., 132, 519–542, 2004.</mixed-citation>
</ref>
<ref id="ref26">
<label>26</label><mixed-citation publication-type="other" xlink:type="simple">Toniazzo, T., Abel, S. J., Wood, R., Mechoso, C. R., Allen, G., and Shaffrey, L. C.: Large-scale and synoptic meteorology in the South-East Pacific during the observations campaign VOCALS-REx in Spring 2008, Atmos. Chem. Phys. Discuss., 11, 225–288, &lt;a href=&quot;http://dx.doi.org/10.5194/acpd-11-225-2011&quot;&gt;https://doi.org/10.5194/acpd-11-225-2011&lt;/a&gt;, 2011.</mixed-citation>
</ref>
<ref id="ref27">
<label>27</label><mixed-citation publication-type="other" xlink:type="simple">VanZanten, M.&amp;nbsp;C. and Stevens, B.: Observations of the Structure of Heavily Precipitating Marine Stratocumulus, J. Atmos. Sci., 62, 4327–4342, 2005.</mixed-citation>
</ref>
<ref id="ref28">
<label>28</label><mixed-citation publication-type="other" xlink:type="simple">Wang, H. and Feingold, G.: Modeling Mesoscale Cellular Structures and Drizzle in Marine Stratocumulus. Part I: Impact of Drizzle on the Formation and Evolution of Open Cells., J. Atmos. Sci., 66, 3237–3256, 2009{a}.</mixed-citation>
</ref>
<ref id="ref29">
<label>29</label><mixed-citation publication-type="other" xlink:type="simple">Wang, H. and Feingold, G.: Modeling Mesoscale Cellular Structures and Drizzle in Marine Stratocumulus. Part I: Impact of Drizzle on the Formation and Evolution of Open Cells., J. Atmos. Sci., 66, 3237–3256, 2009{b}.</mixed-citation>
</ref>
<ref id="ref30">
<label>30</label><mixed-citation publication-type="other" xlink:type="simple">Wang, H., Feingold, G., Wood, R., and Kazil, J.: Modelling microphysical and meteorological controls on precipitation and cloud cellular structures in Southeast Pacific stratocumulus, Atmos. Chem. Phys., 10, 6347–6362, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-10-6347-2010&quot;&gt;https://doi.org/10.5194/acp-10-6347-2010&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref31">
<label>31</label><mixed-citation publication-type="other" xlink:type="simple">Wang, S., O&apos;Neill, L. W., Jiang, Q., de Szoeke, S. P., Hong, X., Jin, H., Thompson, W. T., and Zheng, X.: A regional real-time forecast of marine boundary layers during VOCALS-REx, Atmos. Chem. Phys., 11, 421–437, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-11-421-2011&quot;&gt;https://doi.org/10.5194/acp-11-421-2011&lt;/a&gt;, 2011.</mixed-citation>
</ref>
<ref id="ref32">
<label>32</label><mixed-citation publication-type="other" xlink:type="simple">Webb, E.&amp;nbsp;K.: Profile relationships: The log-linear range, and extension to strong stability, Quart. J. Roy. Meteor. Soc., 96, 67–90, 1970.</mixed-citation>
</ref>
<ref id="ref33">
<label>33</label><mixed-citation publication-type="other" xlink:type="simple">Wood, R., Comstock, K.&amp;nbsp;K., Bretherton, C.&amp;nbsp;S., Cornish, C., Tomlinson, J., Collins, D.&amp;nbsp;R., and Fairall, C.: Open cellular structure in marine stratocumulus sheets, J. Geophys. Res., 113, D12207, &lt;a href=&quot;http://dx.doi.org/10.1029/2007JD009&quot;&gt;https://doi.org/10.1029/2007JD009&lt;/a&gt;,371, 2008.</mixed-citation>
</ref>
<ref id="ref34">
<label>34</label><mixed-citation publication-type="other" xlink:type="simple">Wood, R., Bretherton, C. S., Leon, D., Clarke, A. D., Zuidema, P., Allen, G., and Coe, H.: An aircraft case study of the spatial transition from closed to open mesoscale cellular convection over the Southeast Pacific, Atmos. Chem. Phys., 11, 2341–2370, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-11-2341-2011&quot;&gt;https://doi.org/10.5194/acp-11-2341-2011&lt;/a&gt;, 2011.</mixed-citation>
</ref>
<ref id="ref35">
<label>35</label><mixed-citation publication-type="other" xlink:type="simple">Wood, R., Mechoso, C. R., Bretherton, C. S., Weller, R. A., Huebert, B., Straneo, F., Albrecht, B. A., Coe, H., Allen, G., Vaughan, G., Daum, P., Fairall, C., Chand, D., Gallardo Klenner, L., Garreaud, R., Grados, C., Covert, D. S., Bates, T. S., Krejci, R., Russell, L. M., de Szoeke, S., Brewer, A., Yuter, S. E., Springston, S. R., Chaigneau, A., Toniazzo, T., Minnis, P., Palikonda, R., Abel, S. J., Brown, W. O. J., Williams, S., Fochesatto, J., Brioude, J., and Bower, K. N.: The VAMOS Ocean-Cloud-Atmosphere-Land Study Regional Experiment (VOCALS-REx): goals, platforms, and field operations, Atmos. Chem. Phys., 11, 627–654, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-11-627-2011&quot;&gt;https://doi.org/10.5194/acp-11-627-2011&lt;/a&gt;, 2011.</mixed-citation>
</ref>
<ref id="ref36">
<label>36</label><mixed-citation publication-type="other" xlink:type="simple">Wyant, M. C., Wood, R., Bretherton, C. S., Mechoso, C. R., Bacmeister, J., Balmaseda, M. A., Barrett, B., Codron, F., Earnshaw, P., Fast, J., Hannay, C., Kaiser, J. W., Kitagawa, H., Klein, S. A., Köhler, M., Manganello, J., Pan, H.-L., Sun, F., Wang, S., and Wang, Y.: The PreVOCA experiment: modeling the lower troposphere in the Southeast Pacific, Atmos. Chem. Phys., 10, 4757–4774, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-10-4757-2010&quot;&gt;https://doi.org/10.5194/acp-10-4757-2010&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref37">
<label>37</label><mixed-citation publication-type="other" xlink:type="simple">Yang, Q., W. I. Gustafson Jr., Fast, J. D., Wang, H., Easter, R. C., Morrison, H., Lee, Y.-N., Chapman, E. G., Spak, S. N., and Mena-Carrasco, M. A.: Assessing regional scale predictions of aerosols, marine stratocumulus, and their interactions during VOCALS-REx using WRF-Chem, Atmos. Chem. Phys., 11, 11951–11975, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-11-11951-2011&quot;&gt;https://doi.org/10.5194/acp-11-11951-2011&lt;/a&gt;, 2011.</mixed-citation>
</ref>
<ref id="ref38">
<label>38</label><mixed-citation publication-type="other" xlink:type="simple">Zhang, D.-L. and Anthes, R.: A high-resolution model of the planetary boundary layer- sensitivity tests and comparisons with SESAME-79 data, J. Appl. Meteorol., 21, 1594–1609, 1982.</mixed-citation>
</ref>
</ref-list>
</back>
</article>