<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "https://jats.nlm.nih.gov/nlm-dtd/publishing/3.0/journalpublishing3.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="3.0" xml:lang="en">
<front>
<journal-meta>
<journal-id journal-id-type="publisher">ACP</journal-id>
<journal-title-group>
<journal-title>Atmospheric Chemistry and Physics</journal-title>
<abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Atmos. Chem. Phys.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1680-7324</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/acp-12-11003-2012</article-id>
<title-group>
<article-title>Thunderstorms and upper troposphere chemistry during the early stages of the 2006 North American Monsoon</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Barth</surname>
<given-names>M. C.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Lee</surname>
<given-names>J.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Hodzic</surname>
<given-names>A.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Pfister</surname>
<given-names>G.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Skamarock</surname>
<given-names>W. C.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Worden</surname>
<given-names>J.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Wong</surname>
<given-names>J.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Noone</surname>
<given-names>D.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>National Center for Atmospheric Research, Boulder, Colorado, USA</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA</addr-line>
</aff>
<aff id="aff3">
<label>3</label>
<addr-line>Department of Atmospheric and Oceanic Sciences and Cooperative Institute for Research in Environmental Sciences, University of Colorado, Boulder, Colorado, USA</addr-line>
</aff>
<pub-date pub-type="epub">
<day>21</day>
<month>11</month>
<year>2012</year>
</pub-date>
<volume>12</volume>
<issue>22</issue>
<fpage>11003</fpage>
<lpage>11026</lpage>
<permissions>
<copyright-statement>Copyright: &#x000a9; 2012 M. C. Barth et al.</copyright-statement>
<copyright-year>2012</copyright-year>
<license license-type="open-access">
<license-p>This work is licensed under the Creative Commons Attribution 3.0 Unported License. To view a copy of this licence, visit <ext-link ext-link-type="uri"  xlink:href="https://creativecommons.org/licenses/by/3.0/">https://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions>
<self-uri xlink:href="https://acp.copernicus.org/articles/12/11003/2012/acp-12-11003-2012.html">This article is available from https://acp.copernicus.org/articles/12/11003/2012/acp-12-11003-2012.html</self-uri>
<self-uri xlink:href="https://acp.copernicus.org/articles/12/11003/2012/acp-12-11003-2012.pdf">The full text article is available as a PDF file from https://acp.copernicus.org/articles/12/11003/2012/acp-12-11003-2012.pdf</self-uri>
<abstract>
<p>To study the meteorology and chemistry that is associated with the early
stages of the North American Monsoon, the Weather Research and Forecasting
model coupled with Chemistry (WRF-Chem) is applied for the first time at
high resolution (4 km grid spacing, allowing for explicit representation of
convection) over a large region (continental US and northern Mexico) for a
multi-week (15 July to 7 August 2006) integration. Evaluation of model
results shows that WRF-Chem reasonably represents the large-scale
meteorology and strong convective storms, but tends to overestimate weak
convection. In the upper troposphere, the WRF-Chem model predicts ozone
(O&lt;sub&gt;3&lt;/sub&gt;) and carbon monoxide (CO) to within 10–20% of aircraft and sonde
measurements. Comparison of UT O&lt;sub&gt;3&lt;/sub&gt; and CO frequency distributions
between WRF-Chem and satellite data indicates that WRF-Chem is lofting CO
too frequently from the boundary layer (BL). This excessive lofting should
also cause biases in the WRF-Chem ozone frequency distribution; however it
agrees well with satellite data suggesting that either the chemical
production of O&lt;sub&gt;3&lt;/sub&gt; in the model is overpredicted or there is too much
stratosphere to troposphere transport in the model. Analysis of different
geographic regions (West Coast, Rocky Mountains, Central Plains, Midwest,
and Gulf Coast) reveals that much of the convective transport occurs in the
Rocky Mountains, while much of the UT ozone chemical production occurs over
the Gulf Coast and Midwest regions where both CO and volatile organic
compounds (VOCs) are abundant in the upper troposphere and promote the
production of peroxy radicals. In all regions most of the ozone chemical
production occurs within 24 h of the air being lofted from the boundary
layer. In addition, analysis of the anticyclone and adjacent air indicates
that ozone mixing ratios within the anticyclone region associated with the
North American Monsoon and just outside the anticyclone are similar.
Increases of O&lt;sub&gt;3&lt;/sub&gt; within the anticyclone are strongly coincident with
entrainment of stratospheric air into the anticyclone, but also are from in
situ O&lt;sub&gt;3&lt;/sub&gt; chemical production. In situ O&lt;sub&gt;3&lt;/sub&gt; production is up to 17%
greater within the anticyclone than just outside the anticyclone when the
anticyclone is over the southern US indicating that the enhancement of
O&lt;sub&gt;3&lt;/sub&gt; is most pronounced over regions with abundant VOCs.</p>
</abstract>
<counts><page-count count="24"/></counts>
</article-meta>
</front>
<body/>
<back>
<ref-list>
<title>References</title>
<ref id="ref1">
<label>1</label><mixed-citation publication-type="other" xlink:type="simple">Ackermann, I. J., Hass, H., Memmesheimer, M., Ebel, A., Binkowski, F. S., and Shankar, U.: Modal aerosol dynamics model for Europe: Development and first applications, Atmos. Environ., 32, 2981–2999, 1998.</mixed-citation>
</ref>
<ref id="ref2">
<label>2</label><mixed-citation publication-type="other" xlink:type="simple">Allen, D., Pickering, K., Duncan, B., and Damon, M: Impact of lightning NO emissions on North American photochemistry as determined using the Global Modeling Initiative (GMI) model, J. Geophys. Res., 115, D22301, &lt;a href=&quot;http://dx.doi.org/10.1029/2010JD014062&quot;&gt;https://doi.org/10.1029/2010JD014062&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref3">
<label>3</label><mixed-citation publication-type="other" xlink:type="simple">Allen, D. J., Pickering, K. E., Pinder, R. W., Henderson, B. H., Appel, K. W., and Prados, A.: Impact of lightning-NO on eastern United States photochemistry during the summer of 2006 as determined using the CMAQ model, Atmos. Chem. Phys., 12, 1737–1758, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-12-1737-2012&quot;&gt;https://doi.org/10.5194/acp-12-1737-2012&lt;/a&gt;, 2012.</mixed-citation>
</ref>
<ref id="ref4">
<label>4</label><mixed-citation publication-type="other" xlink:type="simple">Baughcum, S., Tritz, T., Henderson, S., and Pickett, D.: Scheduled Civil Aircraft Emission Inventories for 1992: Database Development and Analysis, NASA Contractor Report 4700, available at: &lt;a href=&quot;http://ntrs.nasa.gov/archive/nasa/casi.ntrs.nasa.gov/19960038445 1996060751.pdf&quot;&gt;http://ntrs.nasa.gov/archive/nasa/casi.ntrs.nasa.gov/19960038445 1996060751.pdf&lt;/a&gt;, (last access: August 2007), 1996.</mixed-citation>
</ref>
<ref id="ref5">
<label>5</label><mixed-citation publication-type="other" xlink:type="simple">Baughcum, S., Henderson, S., and Sutkus, D.: Scheduled Civil Aircraft Emission Inventories Projected for 2015: Database Development and Analysis, NASA/CR-1998-207638, available at: &lt;a href=&quot;http://ntrs.nasa.gov/archive/nasa/casi.ntrs.nasa.gov/19980055200 1998120133.pdf&quot;&gt;http://ntrs.nasa.gov/archive/nasa/casi.ntrs.nasa.gov/19980055200 1998120133.pdf&lt;/a&gt;, (last access: August 2007), 1998.</mixed-citation>
</ref>
<ref id="ref6">
<label>6</label><mixed-citation publication-type="other" xlink:type="simple">Binkowski, F. S. and Shankar, U.: The regional particulate matter model, 1. Model description and preliminary results, J. Geophys. Res., 100, 26191–26209, 1995.</mixed-citation>
</ref>
<ref id="ref7">
<label>7</label><mixed-citation publication-type="other" xlink:type="simple">Boccippio, D. J., Cummins, K. L. Christian, H. J., and Goodman, S. J.: Combined satellite- and surface-based estimation of the intracloud-cloud-to-ground lightning ratio over the continental United States, Mon. Weather Rev., 129, 108–122, 2001.</mixed-citation>
</ref>
<ref id="ref8">
<label>8</label><mixed-citation publication-type="other" xlink:type="simple">Cavallo, S. M., Dudhia, J., and Snyder, C.: A multilayer upper-boundary condition for longwave radiative flux to correct temperature biases in a mesoscale model, Mon. Weather Rev., 139, 1952–1959, 2011.</mixed-citation>
</ref>
<ref id="ref9">
<label>9</label><mixed-citation publication-type="other" xlink:type="simple">Chapman, E. G., Gustafson Jr., W. I., Easter, R. C., Barnard, J. C., Ghan, S. J., Pekour, M. S., and Fast, J. D.: Coupling aerosol-cloud-radiative processes in the WRF-Chem model: Investigating the radiative impact of elevated point sources, Atmos. Chem. Phys., 9, 945–964, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-9-945-2009&quot;&gt;https://doi.org/10.5194/acp-9-945-2009&lt;/a&gt;, 2009.</mixed-citation>
</ref>
<ref id="ref10">
<label>10</label><mixed-citation publication-type="other" xlink:type="simple">Chatfield, R. B. and Crutzen, P. J.: Sulfur dioxide in remote oceanic air: Cloud transport of reactive precursors, J. Geophys. Res., 89, 7111–7132, 1984.</mixed-citation>
</ref>
<ref id="ref11">
<label>11</label><mixed-citation publication-type="other" xlink:type="simple">Chen, F. and Dudhia, J.: Coupling an advanced land-surface/ hydrology model with the Penn State/NCAR MM5 modeling system, Part I: Model description and implementation. Mon. Weather Rev., 129, 569–585, 2001.</mixed-citation>
</ref>
<ref id="ref12">
<label>12</label><mixed-citation publication-type="other" xlink:type="simple">Choi, Y., Kim, J., Eldering, A., Osterman, G., Yung, Y. L., Gu, Y., and Liou, K. N.: Lightning and anthropogenic NO&lt;i&gt;&lt;sup&gt;x&lt;/sup&gt;&lt;/i&gt; sources over the United States and the western North Atlantic Ocean: Impact on OLR and radiative effects, Geophys. Res. Lett., 36, L17806, &lt;a href=&quot;http://dx.doi.org/10.1029/2009GL039381&quot;&gt;https://doi.org/10.1029/2009GL039381&lt;/a&gt;, 2009.</mixed-citation>
</ref>
<ref id="ref13">
<label>13</label><mixed-citation publication-type="other" xlink:type="simple">Chou M.-D. and Suarez, M. J.: An efficient thermal infrared radiation parameterization for use in general circulation models, NASA Tech. Memo. 104606, 3, 85 pp. 1994.</mixed-citation>
</ref>
<ref id="ref14">
<label>14</label><mixed-citation publication-type="other" xlink:type="simple">Cooper, O. R., Trainer, M., Thompson, A. M., Witte, J. C., Oltmans, S. J., Morris, G., Pickering, K. E., Crawford, J. H., Chen, G., Cohen, R. C., Bertram, T. H., Wooldridge, P., Perring, A., Brune, W. H., Merrill, J., Moody, J. L., Tarasick, D., Nédélec, P., Forbes, G., Newchurch, M. J., Schmidlin, F. J., Johnson, B. J., Turquety, S., Baughcum, S. L., Ren, X., Fehsenfeld, F. C., Meagher, J. F., Spichtinger, N., Brown, C. C., McKeen, S. A., McDermid, I. S., and Leblanc, T.: Large upper tropospheric ozone enhancements above midlatitude North America during summer: In situ evidence from the IONS and MOZAIC ozone measurement network, J. Geophys. Res., 111, D24S05, &lt;a href=&quot;http://dx.doi.org/10.1029/2006JD007306&quot;&gt;https://doi.org/10.1029/2006JD007306&lt;/a&gt;, 2006.</mixed-citation>
</ref>
<ref id="ref15">
<label>15</label><mixed-citation publication-type="other" xlink:type="simple">Cooper, O. R., Trainer, M., Thompson, A. M., Oltmans, S. J., Tarasick, D., Witte, J. C., Stohl, A., Eckhardt, S., Lelieveld, J., Newchurch, M. J., Johnson, B. J., Portmann, R. W., Kalnajs, L., Dubey, M. K., Leblanc, T., McDermid, I. S., Forbes, G., Wolfe, D., Carey-Smith, T., Morris, G. A., Lefer, B., Rappenglück, B., Joseph, E., Schmidlin, F. J., Meagher, J. F., Fehsenfeld, F. C., Keating, T. J., Van Curen, R. A., and Minschwaner, K.: Evidence for a recurring eastern North America upper tropospheric ozone maximum during summer, J. Geophys. Res., 112, D23304, &lt;a href=&quot;http://dx.doi.org/10.1029/2007JD008710&quot;&gt;https://doi.org/10.1029/2007JD008710&lt;/a&gt;, 2007.</mixed-citation>
</ref>
<ref id="ref16">
<label>16</label><mixed-citation publication-type="other" xlink:type="simple">Cooper, O. R., Eckhardt, S., Crawford, J. H., Brown, C. C., Cohen, R. C., Bertram, T. H., Wooldridge, P., Perring, A., Brune, W. H., Ren, X., Brunner, D., and Baughcum, S. L.: Summertime buildup and decay of lightning NO&lt;i&gt;&lt;sup&gt;x&lt;/sup&gt;&lt;/i&gt; and aged thunderstorm outflow above North America, J. Geophys. Res., 114, D01101, &lt;a href=&quot;http://dx.doi.org/10.1029/2008JD010293&quot;&gt;https://doi.org/10.1029/2008JD010293&lt;/a&gt;, 2009.</mixed-citation>
</ref>
<ref id="ref17">
<label>17</label><mixed-citation publication-type="other" xlink:type="simple">DeCaria, A. J., Pickering, K. E., Stenchikov, G. L., and Ott, L. E.: Lightning-generated NO&lt;i&gt;&lt;sub&gt;x&lt;/sub&gt;&lt;/i&gt; and its impact on tropospheric ozone production: A three-dimensional modeling study of a Stratosphere-Troposphere Experiment: Radiation, Aerosols and Ozone (STERAO-A) thunderstorm, J. Geophys. Res., 110, D14303, &lt;a href=&quot;http://dx.doi.org/10.1029/2004JD005556&quot;&gt;https://doi.org/10.1029/2004JD005556&lt;/a&gt;, 2005.</mixed-citation>
</ref>
<ref id="ref18">
<label>18</label><mixed-citation publication-type="other" xlink:type="simple">Dickerson, R. R., Huffman, G. J., Luke, W. T., Nunnermacker, L. J., Pickering, K. E., Leslie, A. C. D., Lindsey, C. G., Slinn, W. G. N., Kelly, T. J., Daum, P. H., Delany, A. C., Greenberg, J. P., Zimmerman, P. R., Boatman, J. F., Ray, J. D., and Stedman, D. H.: Thunderstorms: An important mechanism in the transport of air pollutants, Science, 235, 460–465, 1987.</mixed-citation>
</ref>
<ref id="ref19">
<label>19</label><mixed-citation publication-type="other" xlink:type="simple">Easter R. C., Ghan, S. J., Zhang, Y., Saylor, R. D., Chapman, E. G., Laulainen, N. S., Abdul-Razzak, H., Leung, L. R., Bian, X., and Zaveri, R. A.: MIRAGE: Model description and evaluation of aerosols and trace gases, J. Geophys. Res., 109, D20210, &lt;a href=&quot;http://dx.doi.org/10.1029/2004JD004571&quot;&gt;https://doi.org/10.1029/2004JD004571&lt;/a&gt;, 2004.</mixed-citation>
</ref>
<ref id="ref20">
<label>20</label><mixed-citation publication-type="other" xlink:type="simple">Emmons, L. K., Hess, P. G., Lamarque, J.-F., and Pfister, G. G.: Tagged ozone mechanism for MOZART-4, CAM-chem, and other chemical transport models, Geosci. Model Dev. Discuss., 5, 1949–1985, &lt;a href=&quot;http://dx.doi.org/10.5194/gmdd-5-1949-2012&quot;&gt;https://doi.org/10.5194/gmdd-5-1949-2012&lt;/a&gt;, 2012.</mixed-citation>
</ref>
<ref id="ref21">
<label>21</label><mixed-citation publication-type="other" xlink:type="simple">Fast J. D., Gustafson Jr., W. I., Easter, R. C., Zaveri, R. A., Barnard, J. C., Chapman, E. G., and Grell, G. A.: Evolution of ozone, particulates, and aerosol direct forcing in an urban area using a new fully-coupled meteorology, chemistry, and aerosol model, J. Geophys. Res., 111, D21305, &lt;a href=&quot;http://dx.doi.org/10.1029/2005JD006721&quot;&gt;https://doi.org/10.1029/2005JD006721&lt;/a&gt;, 2006.</mixed-citation>
</ref>
<ref id="ref22">
<label>22</label><mixed-citation publication-type="other" xlink:type="simple">Fast, J., Aiken, A. C., Allan, J., Alexander, L., Campos, T., Canagaratna, M. R., Chapman, E., DeCarlo, P. F., de Foy, B., Gaffney, J., de Gouw, J., Doran, J. C., Emmons, L., Hodzic, A., Herndon, S. C., Huey, G., Jayne, J. T., Jimenez, J. L., Kleinman, L., Kuster, W., Marley, N., Russell, L., Ochoa, C., Onasch, T. B., Pekour, M., Song, C., Ulbrich, I. M., Warneke, C., Welsh-Bon, D., Wiedinmyer, C., Worsnop, D. R., Yu, X.-Y., and Zaveri, R.: Evaluating simulated primary anthropogenic and biomass burning organic aerosols during MILAGRO: implications for assessing treatments of secondary organic aerosols, Atmos. Chem. Phys., 9, 6191–6215, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-9-6191-2009&quot;&gt;https://doi.org/10.5194/acp-9-6191-2009&lt;/a&gt;, 2009.</mixed-citation>
</ref>
<ref id="ref23">
<label>23</label><mixed-citation publication-type="other" xlink:type="simple">Freitas, S. R., Longo, K. M., Diasb, M. A. F. S., Diasb, P. L. S., Chatfield, R., Prins, E., Artaxo, P., Grell, G. A., and Recuero, F. S.: Monitoring the transport of biomass burning emissions in South America, Environ. Fluid Mech., 5, 135–167, &lt;a href=&quot;http://dx.doi.org/10.1007/s10652-005-0243-7&quot;&gt;https://doi.org/10.1007/s10652-005-0243-7&lt;/a&gt;, 2005.</mixed-citation>
</ref>
<ref id="ref24">
<label>24</label><mixed-citation publication-type="other" xlink:type="simple">Freitas, S. R., Longo, K. M., Alonso, M. F., Pirre, M., Marecal, V., Grell, G., Stockler, R., Mello, R. F., and Sánchez Gácita, M.: PREP-CHEM-SRC – 1.0: a preprocessor of trace gas and aerosol emission fields for regional and global atmospheric chemistry models, Geosci. Model Dev., 4, 419–433, &lt;a href=&quot;http://dx.doi.org/10.5194/gmd-4-419-2011&quot;&gt;https://doi.org/10.5194/gmd-4-419-2011&lt;/a&gt;, 2011.</mixed-citation>
</ref>
<ref id="ref25">
<label>25</label><mixed-citation publication-type="other" xlink:type="simple">Grell, G. A. and Devenyi, D.: A generalized approach to parameterizing convection combining ensemble and data assimilation techniques, Geophys. Res. Lett., 29, 1693, &lt;a href=&quot;http://dx.doi.org/10.1029/2002GL015311&quot;&gt;https://doi.org/10.1029/2002GL015311&lt;/a&gt;, 2002.</mixed-citation>
</ref>
<ref id="ref26">
<label>26</label><mixed-citation publication-type="other" xlink:type="simple">Grell G. A., Peckham, S. E., Schmitz, R., McKeen, S. A., Frost, G., Skamarock, W. C., and Eder, B.: Fully coupled &quot;online&quot; chemistry in the WRF model, Atmos. Environ., 39, 6957–6976, 2005.</mixed-citation>
</ref>
<ref id="ref27">
<label>27</label><mixed-citation publication-type="other" xlink:type="simple">Guenther, A., Karl, T., Harley, P., Wiedinmyer, C., Palmer, P. I., and Geron, C.: Estimates of global terrestrial isoprene emissions using MEGAN (Model of Emissions of Gases and Aerosols from Nature), Atmos. Chem. Phys., 6, 3181–3210, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-6-3181-2006&quot;&gt;https://doi.org/10.5194/acp-6-3181-2006&lt;/a&gt;, 2006.</mixed-citation>
</ref>
<ref id="ref28">
<label>28</label><mixed-citation publication-type="other" xlink:type="simple">Hodzic, A., Jimenez, J. L., Madronich, S., Canagaratna, M. R., DeCarlo, P. F., Kleinman, L., and Fast, J.: Modeling organic aerosols in a megacity: potential contribution of semi-volatile and intermediate volatility primary organic compounds to secondary organic aerosol formation, Atmos. Chem. Phys., 10, 5491–5514, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-10-5491-2010&quot;&gt;https://doi.org/10.5194/acp-10-5491-2010&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref29">
<label>29</label><mixed-citation publication-type="other" xlink:type="simple">Janjic, Z. I.: Nonsingular implementation of the Mellor-Yamada Level 2.5 scheme in the NCEP meso model, NCEP Office Note, No. 437, 61 pp., 2002.</mixed-citation>
</ref>
<ref id="ref30">
<label>30</label><mixed-citation publication-type="other" xlink:type="simple">Jourdain, L., Kulawik, S. S., Worden, H. M., Pickering, K. E., Worden, J., and Thompson, A. M.: Lightning NO&lt;i&gt;&lt;sup&gt;x&lt;/sup&gt;&lt;/i&gt; emissions over the USA constrained by TES ozone observations and the GEOS-Chem model, Atmos. Chem. Phys., 10, 107–119, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-10-107-2010&quot;&gt;https://doi.org/10.5194/acp-10-107-2010&lt;/a&gt;, 2010.</mixed-citation>
</ref>
<ref id="ref31">
<label>31</label><mixed-citation publication-type="other" xlink:type="simple">Lamarque, J.-F., Emmons, L. K., Hess, P. G., Kinnison, D. E., Tilmes, S., Vitt, F., Heald, C. L., Holland, E. A., Lauritzen, P. H., Neu, J., Orlando, J. J., Rasch, P. J., and Tyndall, G. K.: CAM-chem: description and evaluation of interactive atmospheric chemistry in the Community Earth System Model, Geosci. Model Dev., 5, 369–411, &lt;a href=&quot;http://dx.doi.org/10.5194/gmd-5-369-2012&quot;&gt;https://doi.org/10.5194/gmd-5-369-2012&lt;/a&gt;, 2012.</mixed-citation>
</ref>
<ref id="ref32">
<label>32</label><mixed-citation publication-type="other" xlink:type="simple">Lawrence, M. G., von Kuhlmann, R., Salzmann, M., and Rasch, P. J.: The balance of effects of deep convective mixing on tropospheric ozone, Geophys. Res. Lett., 30, 1940, &lt;a href=&quot;http://dx.doi.org/10.1029/2003GL017644&quot;&gt;https://doi.org/10.1029/2003GL017644&lt;/a&gt;, 2003.</mixed-citation>
</ref>
<ref id="ref33">
<label>33</label><mixed-citation publication-type="other" xlink:type="simple">Lelieveld, J. and Crutzen, P. J.: Role of deep cloud convection in the ozone budget of the troposphere, Science, 264, 1759–1761, 1994.</mixed-citation>
</ref>
<ref id="ref34">
<label>34</label><mixed-citation publication-type="other" xlink:type="simple">Li, Q., Jacob, D. J., Park, R., Wang, Y., Heald, C. L., Hudman, R., Yantosca, R. M., Martin, R. V., and Evans, M.: North American pollution outflow and the trapping of convectively lifted pollution by upper-level anticyclone, J. Geophys. Res., 110, D10301, &lt;a href=&quot;http://dx.doi.org/10.1029/2004JD005039&quot;&gt;https://doi.org/10.1029/2004JD005039&lt;/a&gt;, 2005.</mixed-citation>
</ref>
<ref id="ref35">
<label>35</label><mixed-citation publication-type="other" xlink:type="simple">Lin, Y.-L., Farley, R. D., and Orville, H. D.: Bulk parameterization of the snow field in a cloud model, J. Clim. Appl. Meteorol., 22, 1065–1092, 1983.</mixed-citation>
</ref>
<ref id="ref36">
<label>36</label><mixed-citation publication-type="other" xlink:type="simple">Marenco, A., Thouret, V., Nedelec, P., Smit, H., Helten, M., Kley, D., Karcher, F., Simon, P., Law, K., Pyle, J., Poschmann, G., Von Wrede, R., Hume, C., and Cook, T.: Measurement of ozone and water vapor by Airbus in-service aircraft: The MOZAIC airborne program, An overview, J. Geophys. Res., 103, 25631–25642, &lt;a href=&quot;http://dx.doi.org/10.1029/98JD00977&quot;&gt;https://doi.org/10.1029/98JD00977&lt;/a&gt;, 1998.</mixed-citation>
</ref>
<ref id="ref37">
<label>37</label><mixed-citation publication-type="other" xlink:type="simple">Mlawer, E. J., Taubman, S. J., Brown, P. D., Iacono, M. J., and Clough, S. A.: Radiative transfer for inhomogeneous atmosphere: RRTM, a validated correlated-k model for the long- wave, J. Geophys. Res., 102, 16663–16682, 1997.</mixed-citation>
</ref>
<ref id="ref38">
<label>38</label><mixed-citation publication-type="other" xlink:type="simple">Mortlock, A. and Alstyne, R. V.: Military, Charter, Unreported Domestic Traffic and General Aviation: 1976, 1984, 1992, and 2015 Emission Scenarios, NASA CR-1998-207639, available at: &lt;a href=&quot;http://ntrs.nasa.gov/archive/nasa/casi.ntrs.nasa.gov/19980047346 1998120131.pdf&quot;&gt;http://ntrs.nasa.gov/archive/nasa/casi.ntrs.nasa.gov/19980047346 1998120131.pdf&lt;/a&gt; (last access: August 2007), 1998.</mixed-citation>
</ref>
<ref id="ref39">
<label>39</label><mixed-citation publication-type="other" xlink:type="simple">Park, R. J., Pickering, K. E., Allen, D. J., Stenchikov, G. L., and Fox-Rabinovitz, M. S.: Global simulation of tropospheric ozone using the University of Maryland Chemical Transport Model (UMD-CTM): 2. Regional transport and chemistry over the central United States using a stretched grid, J. Geophys. Res., 109, D09303, &lt;a href=&quot;http://dx.doi.org/10.1029/2003JD004269&quot;&gt;https://doi.org/10.1029/2003JD004269&lt;/a&gt;, 2004.</mixed-citation>
</ref>
<ref id="ref40">
<label>40</label><mixed-citation publication-type="other" xlink:type="simple">Price, C. and Rind, D.: A Simple Lightning Parameterization for Calculating Global Lightning Distributions, J. Geophys. Res., 97, 9919–9933, &lt;a href=&quot;http://dx.doi.org/10.1029/92JD00719&quot;&gt;https://doi.org/10.1029/92JD00719&lt;/a&gt;, 1992.</mixed-citation>
</ref>
<ref id="ref41">
<label>41</label><mixed-citation publication-type="other" xlink:type="simple">Roelofs, G.-J. and Lelieveld, J.: Model study of the influence of cross- tropopause O&lt;sub&gt;3&lt;/sub&gt; transports on tropospheric O&lt;sub&gt;3&lt;/sub&gt; levels, Tellus B, 49, 38–55, 1997.</mixed-citation>
</ref>
<ref id="ref42">
<label>42</label><mixed-citation publication-type="other" xlink:type="simple">Sandu, A. and Sander, R.: Technical note: Simulating chemical systems in Fortran90 and Matlab with the Kinetic PreProcessor KPP-2.1, Atmos. Chem. Phys., 6, 187–195, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-6-187-2006&quot;&gt;https://doi.org/10.5194/acp-6-187-2006&lt;/a&gt;, 2006.</mixed-citation>
</ref>
<ref id="ref43">
<label>43</label><mixed-citation publication-type="other" xlink:type="simple">Saxena, P., Hudeschewskyj, A. B., Seigneur, C., and Seinfeld, J. H.: A comparative study of equilibrium approaches to the chemical characterization of secondary aerosols, Atmos. Environ., 20, 1471–1483, 1986.</mixed-citation>
</ref>
<ref id="ref44">
<label>44</label><mixed-citation publication-type="other" xlink:type="simple">Seifert, A. and Weisman, M.: A comparison of bulk microphysical schemes for cloud resolving numerical weather prediction, WRF Users&apos; Workshop, &lt;a href=&quot;http://www.mmm.ucar.edu/wrf/users/workshops/WS2005/abstracts/Session6/2-Seifert.pdf&quot;&gt;http://www.mmm.ucar.edu/wrf/users/workshops/WS2005/abstracts/Session6/2-Seifert.pdf&lt;/a&gt;, 2005.</mixed-citation>
</ref>
<ref id="ref45">
<label>45</label><mixed-citation publication-type="other" xlink:type="simple">Shaw, W., Allwine, K. J., Fritz, B. G., Rutz, F. C., Rishel, J. P., and Chapman, E. G.: An evaluation of the wind erosion module in DUSTRAN, Atmos. Environ., 42, 1907–1921, 2008.</mixed-citation>
</ref>
<ref id="ref46">
<label>46</label><mixed-citation publication-type="other" xlink:type="simple">Snow, J. A., Heikes, B. G., Shen, H., O&apos;Sullivan, D. W., Fried, A., and Walega, J.: Hydrogen peroxide, methyl hydroperoxide, and formaldehyde over North America and the North Atlantic, J. Geophys. Res., 112, D12S07, &lt;a href=&quot;http://dx.doi.org/10.1029/2006JD007746&quot;&gt;https://doi.org/10.1029/2006JD007746&lt;/a&gt;, 2007.</mixed-citation>
</ref>
<ref id="ref47">
<label>47</label><mixed-citation publication-type="other" xlink:type="simple">Skamarock, W. C., Klemp, J. B., Dudhia, J., Gill, D. O., Barker, D. M., Duda, M. G., Huang, X.-Y., Wang, W., and Powers, J. G: A description of the advanced research WRF version 3, NCAR Technical Note, NCAR/TN-475+STR, 125 pp., 2008.</mixed-citation>
</ref>
<ref id="ref48">
<label>48</label><mixed-citation publication-type="other" xlink:type="simple">Stephens, S., Madronich, S., Wu, F., Olson, J. B., Ramos, R., Retama, A., and Muñoz, R.: Weekly patterns of México City&apos;s surface concentrations of CO, NO&lt;i&gt;&lt;sup&gt;x&lt;/sup&gt;&lt;/i&gt;, PM&lt;sub&gt;10&lt;/sub&gt; and O&lt;sub&gt;3&lt;/sub&gt; during 1986–2007, Atmos. Chem. Phys., 8, 5313–5325, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-8-5313-2008&quot;&gt;https://doi.org/10.5194/acp-8-5313-2008&lt;/a&gt;, 2008.</mixed-citation>
</ref>
<ref id="ref49">
<label>49</label><mixed-citation publication-type="other" xlink:type="simple">Stockwell, W. R., Kirchner, F., Kuhn, M., and Seefeld, S.: A new mechanism for regional atmospheric chemistry modeling, J. Geophys. Res., 102, 25847–25879, 1997.</mixed-citation>
</ref>
<ref id="ref50">
<label>50</label><mixed-citation publication-type="other" xlink:type="simple">Sutkus, D., Baughcum, S., and DuBois, D.: Scheduled Civil Aircraft Emission Inventories for 1999: Database Development and Analysis, NASA/CR-2001-211216, available at: &lt;a href=&quot;http://hdl.handle.net/2060/20020012699&quot;&gt;http://hdl.handle.net/2060/20020012699&lt;/a&gt; (last access: August 2007), 2001.</mixed-citation>
</ref>
<ref id="ref51">
<label>51</label><mixed-citation publication-type="other" xlink:type="simple">Thompson, A. M., Yorks, J. E., Miller, S. K., Witte, J. C., Dougherty, K. M., Morris, G. A., Baumgardner, D., Ladino, L., and Rappenglück, B.: Tropospheric ozone sources and wave activity over Mexico City and Houston during MILAGRO/Intercontinental Transport Experiment (INTEX-B) Ozonesonde Network Study, 2006 (IONS-06), Atmos. Chem. Phys., 8, 5113–5125, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-8-5113-2008&quot;&gt;https://doi.org/10.5194/acp-8-5113-2008&lt;/a&gt;,</mixed-citation>
</ref>
<ref id="ref52">
<label>52</label><mixed-citation publication-type="other" xlink:type="simple">Tie, X., Madronich, S., Walters, S., Zhang, R., Rasch, P., and Collins, W.: Effect of clouds on photolysis and oxidants in the troposphere, J. Geophys. Res., 108, 4642, &lt;a href=&quot;http://dx.doi.org/10.1029/2003JD003659&quot;&gt;https://doi.org/10.1029/2003JD003659&lt;/a&gt;, 2003.</mixed-citation>
</ref>
<ref id="ref53">
<label>53</label><mixed-citation publication-type="other" xlink:type="simple">Wang, H., Skamarock, W. C., and Feingold, G.: Evaluation of scalar advection schemes in the advanced research WRF model using large-eddy simulations of aerosol-cloud interaction, Mon. Weather Rev., 137, 2547–2558, &lt;a href=&quot;http://dx.doi.org/10.1175/2009MWR2820.1&quot;&gt;https://doi.org/10.1175/2009MWR2820.1&lt;/a&gt;, 2009.</mixed-citation>
</ref>
<ref id="ref54">
<label>54</label><mixed-citation publication-type="other" xlink:type="simple">Wang, Y., Jacob, D. J., and Logan, J. A.: Global simulation of tropospheric O3-NOx-hydrocarbon chemistry, 3, Origin of tropospheric ozone and effects of nonmethane hydrocarbons, J. Geophys. Res., 103, 10757–10767, 1998.</mixed-citation>
</ref>
<ref id="ref55">
<label>55</label><mixed-citation publication-type="other" xlink:type="simple">Wesely, M.: Parameterization of surface resistances to gaseous dry deposition in regional-scale numerical models, Atmos. Environ., 23, 1293–1304, 1989.</mixed-citation>
</ref>
<ref id="ref56">
<label>56</label><mixed-citation publication-type="other" xlink:type="simple">Wiedinmyer, C.,  Quayle, B.  Geron, C.  Belote, A.  McKenzie, D.  Zhang, X., O&apos;Neill, S., and Klos Wynne, K.: Estimating emissions from fires in North America for air quality modeling, Atmos. Environ., 40, 3419–3432, 2006.</mixed-citation>
</ref>
<ref id="ref57">
<label>57</label><mixed-citation publication-type="other" xlink:type="simple">Wong, J., Barth, M. C., and Noone, D.: Evaluating a lightning parameterization based on cloud-top height for mesoscale numerical model simulations, Geosci. Model Dev. Discuss., 5, 3493–3531, https://doi.org/10.5194/gmdd-5-3493-2012, 2012.</mixed-citation>
</ref>
<ref id="ref58">
<label>58</label><mixed-citation publication-type="other" xlink:type="simple">Worden J. R., Bowman, K. W., and Jones, D. B.: Two-dimensional characterization of atmospheric profile retrievals from limb sounding observations, J. Quant. Spectrosc. Ra., 86, 45–71, 2004.</mixed-citation>
</ref>
<ref id="ref59">
<label>59</label><mixed-citation publication-type="other" xlink:type="simple">Zhang, R. Y., Tie, X. X., and Bond, D. W.: Impacts of anthropogenic and natural NOx sources over the US on tropospheric chemistry, P. Natl. Acad. Sci. USA, 100, 1505–1509, &lt;a href=&quot;http://dx.doi.org/10.1073/pnas.252763799&quot;&gt;https://doi.org/10.1073/pnas.252763799&lt;/a&gt;, 2003.</mixed-citation>
</ref>
<ref id="ref60">
<label>60</label><mixed-citation publication-type="other" xlink:type="simple">Zhao, C., Wang, Y., Choi, Y., and Zeng, T.: Summertime impact of convective transport and lightning NO&lt;i&gt;&lt;sup&gt;x&lt;/sup&gt;&lt;/i&gt; production over North America: modeling dependence on meteorological simulations, Atmos. Chem. Phys., 9, 4315–4327, &lt;a href=&quot;http://dx.doi.org/10.5194/acp-9-4315-2009&quot;&gt;https://doi.org/10.5194/acp-9-4315-2009&lt;/a&gt;, 2009.</mixed-citation>
</ref>
</ref-list>
</back>
</article>